data_1D0K # _entry.id 1D0K # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.385 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1D0K pdb_00001d0k 10.2210/pdb1d0k/pdb RCSB RCSB009683 ? ? WWPDB D_1000009683 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2000-03-06 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 2 0 2020-07-29 5 'Structure model' 2 1 2021-11-03 6 'Structure model' 2 2 2024-02-07 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 4 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Non-polymer description' 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' Advisory 5 4 'Structure model' 'Atomic model' 6 4 'Structure model' 'Data collection' 7 4 'Structure model' 'Derived calculations' 8 4 'Structure model' 'Structure summary' 9 5 'Structure model' 'Database references' 10 5 'Structure model' 'Structure summary' 11 6 'Structure model' 'Data collection' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' atom_site 2 4 'Structure model' chem_comp 3 4 'Structure model' database_PDB_caveat 4 4 'Structure model' entity 5 4 'Structure model' pdbx_branch_scheme 6 4 'Structure model' pdbx_chem_comp_identifier 7 4 'Structure model' pdbx_entity_branch 8 4 'Structure model' pdbx_entity_branch_descriptor 9 4 'Structure model' pdbx_entity_branch_link 10 4 'Structure model' pdbx_entity_branch_list 11 4 'Structure model' pdbx_entity_nonpoly 12 4 'Structure model' pdbx_nonpoly_scheme 13 4 'Structure model' pdbx_struct_assembly_gen 14 4 'Structure model' pdbx_struct_conn_angle 15 4 'Structure model' pdbx_unobs_or_zero_occ_atoms 16 4 'Structure model' pdbx_validate_chiral 17 4 'Structure model' pdbx_validate_close_contact 18 4 'Structure model' struct_asym 19 4 'Structure model' struct_conn 20 4 'Structure model' struct_site 21 4 'Structure model' struct_site_gen 22 5 'Structure model' chem_comp 23 5 'Structure model' database_2 24 5 'Structure model' struct_ref_seq_dif 25 6 'Structure model' chem_comp_atom 26 6 'Structure model' chem_comp_bond # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_atom_site.B_iso_or_equiv' 2 4 'Structure model' '_atom_site.Cartn_x' 3 4 'Structure model' '_atom_site.Cartn_y' 4 4 'Structure model' '_atom_site.Cartn_z' 5 4 'Structure model' '_atom_site.auth_asym_id' 6 4 'Structure model' '_atom_site.auth_atom_id' 7 4 'Structure model' '_atom_site.auth_comp_id' 8 4 'Structure model' '_atom_site.auth_seq_id' 9 4 'Structure model' '_atom_site.label_alt_id' 10 4 'Structure model' '_atom_site.label_asym_id' 11 4 'Structure model' '_atom_site.label_atom_id' 12 4 'Structure model' '_atom_site.label_comp_id' 13 4 'Structure model' '_atom_site.label_entity_id' 14 4 'Structure model' '_atom_site.type_symbol' 15 4 'Structure model' '_chem_comp.name' 16 4 'Structure model' '_chem_comp.type' 17 4 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 18 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 19 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 20 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 21 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 22 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 23 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 24 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 25 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 26 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 27 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 28 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 29 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 30 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 31 4 'Structure model' '_pdbx_struct_conn_angle.value' 32 4 'Structure model' '_pdbx_unobs_or_zero_occ_atoms.auth_asym_id' 33 4 'Structure model' '_pdbx_unobs_or_zero_occ_atoms.auth_seq_id' 34 4 'Structure model' '_pdbx_unobs_or_zero_occ_atoms.label_asym_id' 35 4 'Structure model' '_pdbx_unobs_or_zero_occ_atoms.label_seq_id' 36 4 'Structure model' '_pdbx_validate_chiral.auth_asym_id' 37 4 'Structure model' '_pdbx_validate_chiral.auth_seq_id' 38 4 'Structure model' '_pdbx_validate_close_contact.auth_asym_id_1' 39 4 'Structure model' '_pdbx_validate_close_contact.auth_seq_id_1' 40 4 'Structure model' '_struct_conn.pdbx_dist_value' 41 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 42 4 'Structure model' '_struct_conn.pdbx_ptnr1_label_alt_id' 43 4 'Structure model' '_struct_conn.pdbx_ptnr2_label_alt_id' 44 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 45 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 46 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 47 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 48 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 49 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 50 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 51 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 52 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 53 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 54 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 55 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 56 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 57 5 'Structure model' '_chem_comp.pdbx_synonyms' 58 5 'Structure model' '_database_2.pdbx_DOI' 59 5 'Structure model' '_database_2.pdbx_database_accession' 60 5 'Structure model' '_struct_ref_seq_dif.details' # _database_PDB_caveat.id 1 _database_PDB_caveat.text 'AMU C 1 HAS WRONG CHIRALITY AT ATOM C1' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1D0K _pdbx_database_status.recvd_initial_deposition_date 1999-09-12 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1QUS 'NATIVE SLT35 STRUCTURE AT 1.7 ANG. RESOLUTION.' unspecified PDB 1QUT 'SLT35 IN COMPLEX WITH GLCNAC' unspecified PDB 1QDR 'SLT35 IN COMPLEX WITH NA+' unspecified PDB 1QDT 'SLT35 IN COMPLEX WITH CA2+' unspecified PDB 1D0K 'SLT35 IN COMPLEX WITH TWO MURODIPEPTIDES (GLCNAC-MURNAC-L-ALA-D-GLU)' unspecified PDB 1D0L 'SLT35 IN COMPLEX WITH BULGECIN A' unspecified PDB 1D0M 'SLT35 IN COMPLEX WITH BULGECIN A AND (GLCNAC)2' unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'van Asselt, E.J.' 1 'Kalk, K.H.' 2 'Dijkstra, B.W.' 3 # _citation.id primary _citation.title 'Crystallographic studies of the interactions of Escherichia coli lytic transglycosylase Slt35 with peptidoglycan.' _citation.journal_abbrev Biochemistry _citation.journal_volume 39 _citation.page_first 1924 _citation.page_last 1934 _citation.year 2000 _citation.journal_id_ASTM BICHAW _citation.country US _citation.journal_id_ISSN 0006-2960 _citation.journal_id_CSD 0033 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 10684641 _citation.pdbx_database_id_DOI 10.1021/bi992161p # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'van Asselt, E.J.' 1 ? primary 'Kalk, K.H.' 2 ? primary 'Dijkstra, B.W.' 3 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man '35KD SOLUBLE LYTIC TRANSGLYCOSYLASE' 36079.660 1 ? 'L40M, L41V' ? ? 2 branched man '2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-N-acetyl-beta-muramic acid' 496.463 2 ? ? ? ? 3 non-polymer syn 'CALCIUM ION' 40.078 1 ? ? ? ? 4 non-polymer syn ALANINE 89.093 2 ? ? ? ? 5 non-polymer syn 'D-GLUTAMIC ACID' 147.129 2 ? ? ? ? 6 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 7 water nat water 18.015 362 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name SLT35 # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MVEPQHNVMQMGGDFANNPNAQQFIDKMVNKHGFDRQQLQEILSQAKRLDSVLRLMDNQAPTTSVKPPSGPNGAWLRYRK KFITPDNVQNGVVFWNQYEDALNRAWQVYGVPPEIIVGIIGVETRWGRVMGKTRILDALATLSFNYPRRAEYFSGELETF LLMARDEQDDPLNLKGSFAGAMGYGQFMPSSYKQYAVDFSGDGHINLWDPVDAIGSVANYFKAHGWVKGDQVAVMANGQA PGLPNGFKTKYSISQLAAAGLTPQQPLGNHQQASLLRLDVGTGYQYWYGLPNFYTITRYNHSTHYAMAVWQLGQAVALAR VQ ; _entity_poly.pdbx_seq_one_letter_code_can ;MVEPQHNVMQMGGDFANNPNAQQFIDKMVNKHGFDRQQLQEILSQAKRLDSVLRLMDNQAPTTSVKPPSGPNGAWLRYRK KFITPDNVQNGVVFWNQYEDALNRAWQVYGVPPEIIVGIIGVETRWGRVMGKTRILDALATLSFNYPRRAEYFSGELETF LLMARDEQDDPLNLKGSFAGAMGYGQFMPSSYKQYAVDFSGDGHINLWDPVDAIGSVANYFKAHGWVKGDQVAVMANGQA PGLPNGFKTKYSISQLAAAGLTPQQPLGNHQQASLLRLDVGTGYQYWYGLPNFYTITRYNHSTHYAMAVWQLGQAVALAR VQ ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'CALCIUM ION' CA 4 ALANINE ALA 5 'D-GLUTAMIC ACID' DGL 6 GLYCEROL GOL 7 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 VAL n 1 3 GLU n 1 4 PRO n 1 5 GLN n 1 6 HIS n 1 7 ASN n 1 8 VAL n 1 9 MET n 1 10 GLN n 1 11 MET n 1 12 GLY n 1 13 GLY n 1 14 ASP n 1 15 PHE n 1 16 ALA n 1 17 ASN n 1 18 ASN n 1 19 PRO n 1 20 ASN n 1 21 ALA n 1 22 GLN n 1 23 GLN n 1 24 PHE n 1 25 ILE n 1 26 ASP n 1 27 LYS n 1 28 MET n 1 29 VAL n 1 30 ASN n 1 31 LYS n 1 32 HIS n 1 33 GLY n 1 34 PHE n 1 35 ASP n 1 36 ARG n 1 37 GLN n 1 38 GLN n 1 39 LEU n 1 40 GLN n 1 41 GLU n 1 42 ILE n 1 43 LEU n 1 44 SER n 1 45 GLN n 1 46 ALA n 1 47 LYS n 1 48 ARG n 1 49 LEU n 1 50 ASP n 1 51 SER n 1 52 VAL n 1 53 LEU n 1 54 ARG n 1 55 LEU n 1 56 MET n 1 57 ASP n 1 58 ASN n 1 59 GLN n 1 60 ALA n 1 61 PRO n 1 62 THR n 1 63 THR n 1 64 SER n 1 65 VAL n 1 66 LYS n 1 67 PRO n 1 68 PRO n 1 69 SER n 1 70 GLY n 1 71 PRO n 1 72 ASN n 1 73 GLY n 1 74 ALA n 1 75 TRP n 1 76 LEU n 1 77 ARG n 1 78 TYR n 1 79 ARG n 1 80 LYS n 1 81 LYS n 1 82 PHE n 1 83 ILE n 1 84 THR n 1 85 PRO n 1 86 ASP n 1 87 ASN n 1 88 VAL n 1 89 GLN n 1 90 ASN n 1 91 GLY n 1 92 VAL n 1 93 VAL n 1 94 PHE n 1 95 TRP n 1 96 ASN n 1 97 GLN n 1 98 TYR n 1 99 GLU n 1 100 ASP n 1 101 ALA n 1 102 LEU n 1 103 ASN n 1 104 ARG n 1 105 ALA n 1 106 TRP n 1 107 GLN n 1 108 VAL n 1 109 TYR n 1 110 GLY n 1 111 VAL n 1 112 PRO n 1 113 PRO n 1 114 GLU n 1 115 ILE n 1 116 ILE n 1 117 VAL n 1 118 GLY n 1 119 ILE n 1 120 ILE n 1 121 GLY n 1 122 VAL n 1 123 GLU n 1 124 THR n 1 125 ARG n 1 126 TRP n 1 127 GLY n 1 128 ARG n 1 129 VAL n 1 130 MET n 1 131 GLY n 1 132 LYS n 1 133 THR n 1 134 ARG n 1 135 ILE n 1 136 LEU n 1 137 ASP n 1 138 ALA n 1 139 LEU n 1 140 ALA n 1 141 THR n 1 142 LEU n 1 143 SER n 1 144 PHE n 1 145 ASN n 1 146 TYR n 1 147 PRO n 1 148 ARG n 1 149 ARG n 1 150 ALA n 1 151 GLU n 1 152 TYR n 1 153 PHE n 1 154 SER n 1 155 GLY n 1 156 GLU n 1 157 LEU n 1 158 GLU n 1 159 THR n 1 160 PHE n 1 161 LEU n 1 162 LEU n 1 163 MET n 1 164 ALA n 1 165 ARG n 1 166 ASP n 1 167 GLU n 1 168 GLN n 1 169 ASP n 1 170 ASP n 1 171 PRO n 1 172 LEU n 1 173 ASN n 1 174 LEU n 1 175 LYS n 1 176 GLY n 1 177 SER n 1 178 PHE n 1 179 ALA n 1 180 GLY n 1 181 ALA n 1 182 MET n 1 183 GLY n 1 184 TYR n 1 185 GLY n 1 186 GLN n 1 187 PHE n 1 188 MET n 1 189 PRO n 1 190 SER n 1 191 SER n 1 192 TYR n 1 193 LYS n 1 194 GLN n 1 195 TYR n 1 196 ALA n 1 197 VAL n 1 198 ASP n 1 199 PHE n 1 200 SER n 1 201 GLY n 1 202 ASP n 1 203 GLY n 1 204 HIS n 1 205 ILE n 1 206 ASN n 1 207 LEU n 1 208 TRP n 1 209 ASP n 1 210 PRO n 1 211 VAL n 1 212 ASP n 1 213 ALA n 1 214 ILE n 1 215 GLY n 1 216 SER n 1 217 VAL n 1 218 ALA n 1 219 ASN n 1 220 TYR n 1 221 PHE n 1 222 LYS n 1 223 ALA n 1 224 HIS n 1 225 GLY n 1 226 TRP n 1 227 VAL n 1 228 LYS n 1 229 GLY n 1 230 ASP n 1 231 GLN n 1 232 VAL n 1 233 ALA n 1 234 VAL n 1 235 MET n 1 236 ALA n 1 237 ASN n 1 238 GLY n 1 239 GLN n 1 240 ALA n 1 241 PRO n 1 242 GLY n 1 243 LEU n 1 244 PRO n 1 245 ASN n 1 246 GLY n 1 247 PHE n 1 248 LYS n 1 249 THR n 1 250 LYS n 1 251 TYR n 1 252 SER n 1 253 ILE n 1 254 SER n 1 255 GLN n 1 256 LEU n 1 257 ALA n 1 258 ALA n 1 259 ALA n 1 260 GLY n 1 261 LEU n 1 262 THR n 1 263 PRO n 1 264 GLN n 1 265 GLN n 1 266 PRO n 1 267 LEU n 1 268 GLY n 1 269 ASN n 1 270 HIS n 1 271 GLN n 1 272 GLN n 1 273 ALA n 1 274 SER n 1 275 LEU n 1 276 LEU n 1 277 ARG n 1 278 LEU n 1 279 ASP n 1 280 VAL n 1 281 GLY n 1 282 THR n 1 283 GLY n 1 284 TYR n 1 285 GLN n 1 286 TYR n 1 287 TRP n 1 288 TYR n 1 289 GLY n 1 290 LEU n 1 291 PRO n 1 292 ASN n 1 293 PHE n 1 294 TYR n 1 295 THR n 1 296 ILE n 1 297 THR n 1 298 ARG n 1 299 TYR n 1 300 ASN n 1 301 HIS n 1 302 SER n 1 303 THR n 1 304 HIS n 1 305 TYR n 1 306 ALA n 1 307 MET n 1 308 ALA n 1 309 VAL n 1 310 TRP n 1 311 GLN n 1 312 LEU n 1 313 GLY n 1 314 GLN n 1 315 ALA n 1 316 VAL n 1 317 ALA n 1 318 LEU n 1 319 ALA n 1 320 ARG n 1 321 VAL n 1 322 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Escherichia _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 562 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 DGlcpNAcb1-4MurNAc1-ROH 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/2,2,1/[a2122h-1b_1-5_2*NCC/3=O_3*OC^RCO/4=O/3C][a2122h-1b_1-5_2*NCC/3=O]/1-2/a4-b1' WURCS PDB2Glycan 1.1.0 3 2 '[][b-D-GlcpNAc]{[(3+1)][<C3O1>]{}[(4+1)][b-D-GlcpNAc]{}}' LINUCS PDB-CARE ? # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.comp_id_1 NAG _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_2 AMU _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.value_order sing _pdbx_entity_branch_link.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 AMU 'D-saccharide, beta linking' . 'N-acetyl-beta-muramic acid' 'N-acetyl-muramic acid; BETA-N-ACETYLMURAMIC ACID' 'C11 H19 N O8' 293.270 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 DGL 'D-peptide linking' . 'D-GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier AMU 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc3 AMU 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 MurNAc NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 40 40 MET ALA A . n A 1 2 VAL 2 41 41 VAL VAL A . n A 1 3 GLU 3 42 42 GLU GLU A . n A 1 4 PRO 4 43 43 PRO PRO A . n A 1 5 GLN 5 44 44 GLN GLN A . n A 1 6 HIS 6 45 45 HIS HIS A . n A 1 7 ASN 7 46 46 ASN ASN A . n A 1 8 VAL 8 47 47 VAL VAL A . n A 1 9 MET 9 48 48 MET MET A . n A 1 10 GLN 10 49 49 GLN GLN A . n A 1 11 MET 11 50 50 MET MET A . n A 1 12 GLY 12 51 51 GLY GLY A . n A 1 13 GLY 13 52 52 GLY GLY A . n A 1 14 ASP 14 53 53 ASP ASP A . n A 1 15 PHE 15 54 54 PHE PHE A . n A 1 16 ALA 16 55 55 ALA ALA A . n A 1 17 ASN 17 56 56 ASN ASN A . n A 1 18 ASN 18 57 57 ASN ASN A . n A 1 19 PRO 19 58 58 PRO PRO A . n A 1 20 ASN 20 59 59 ASN ASN A . n A 1 21 ALA 21 60 60 ALA ALA A . n A 1 22 GLN 22 61 61 GLN GLN A . n A 1 23 GLN 23 62 62 GLN GLN A . n A 1 24 PHE 24 63 63 PHE PHE A . n A 1 25 ILE 25 64 64 ILE ILE A . n A 1 26 ASP 26 65 65 ASP ASP A . n A 1 27 LYS 27 66 66 LYS LYS A . n A 1 28 MET 28 67 67 MET MET A . n A 1 29 VAL 29 68 68 VAL VAL A . n A 1 30 ASN 30 69 69 ASN ASN A . n A 1 31 LYS 31 70 70 LYS LYS A . n A 1 32 HIS 32 71 71 HIS HIS A . n A 1 33 GLY 33 72 72 GLY GLY A . n A 1 34 PHE 34 73 73 PHE PHE A . n A 1 35 ASP 35 74 74 ASP ASP A . n A 1 36 ARG 36 75 75 ARG ARG A . n A 1 37 GLN 37 76 76 GLN GLN A . n A 1 38 GLN 38 77 77 GLN GLN A . n A 1 39 LEU 39 78 78 LEU LEU A . n A 1 40 GLN 40 79 79 GLN GLN A . n A 1 41 GLU 41 80 80 GLU GLU A . n A 1 42 ILE 42 81 81 ILE ILE A . n A 1 43 LEU 43 82 82 LEU LEU A . n A 1 44 SER 44 83 83 SER SER A . n A 1 45 GLN 45 84 84 GLN GLN A . n A 1 46 ALA 46 85 85 ALA ALA A . n A 1 47 LYS 47 86 86 LYS LYS A . n A 1 48 ARG 48 87 87 ARG ARG A . n A 1 49 LEU 49 88 88 LEU LEU A . n A 1 50 ASP 50 89 89 ASP ASP A . n A 1 51 SER 51 90 90 SER SER A . n A 1 52 VAL 52 91 91 VAL VAL A . n A 1 53 LEU 53 92 92 LEU LEU A . n A 1 54 ARG 54 93 93 ARG ARG A . n A 1 55 LEU 55 94 94 LEU LEU A . n A 1 56 MET 56 95 95 MET MET A . n A 1 57 ASP 57 96 96 ASP ASP A . n A 1 58 ASN 58 97 97 ASN ASN A . n A 1 59 GLN 59 98 98 GLN GLN A . n A 1 60 ALA 60 99 99 ALA ALA A . n A 1 61 PRO 61 100 100 PRO PRO A . n A 1 62 THR 62 101 ? ? ? A . n A 1 63 THR 63 102 ? ? ? A . n A 1 64 SER 64 103 ? ? ? A . n A 1 65 VAL 65 104 ? ? ? A . n A 1 66 LYS 66 105 ? ? ? A . n A 1 67 PRO 67 106 ? ? ? A . n A 1 68 PRO 68 107 ? ? ? A . n A 1 69 SER 69 108 ? ? ? A . n A 1 70 GLY 70 109 109 GLY GLY A . n A 1 71 PRO 71 110 110 PRO PRO A . n A 1 72 ASN 72 111 111 ASN ASN A . n A 1 73 GLY 73 112 112 GLY GLY A . n A 1 74 ALA 74 113 113 ALA ALA A . n A 1 75 TRP 75 114 114 TRP TRP A . n A 1 76 LEU 76 115 115 LEU LEU A . n A 1 77 ARG 77 116 116 ARG ARG A . n A 1 78 TYR 78 117 117 TYR TYR A . n A 1 79 ARG 79 118 118 ARG ARG A . n A 1 80 LYS 80 119 119 LYS LYS A . n A 1 81 LYS 81 120 120 LYS LYS A . n A 1 82 PHE 82 121 121 PHE PHE A . n A 1 83 ILE 83 122 122 ILE ILE A . n A 1 84 THR 84 123 123 THR THR A . n A 1 85 PRO 85 124 124 PRO PRO A . n A 1 86 ASP 86 125 125 ASP ASP A . n A 1 87 ASN 87 126 126 ASN ASN A . n A 1 88 VAL 88 127 127 VAL VAL A . n A 1 89 GLN 89 128 128 GLN GLN A . n A 1 90 ASN 90 129 129 ASN ASN A . n A 1 91 GLY 91 130 130 GLY GLY A . n A 1 92 VAL 92 131 131 VAL VAL A . n A 1 93 VAL 93 132 132 VAL VAL A . n A 1 94 PHE 94 133 133 PHE PHE A . n A 1 95 TRP 95 134 134 TRP TRP A . n A 1 96 ASN 96 135 135 ASN ASN A . n A 1 97 GLN 97 136 136 GLN GLN A . n A 1 98 TYR 98 137 137 TYR TYR A . n A 1 99 GLU 99 138 138 GLU GLU A . n A 1 100 ASP 100 139 139 ASP ASP A . n A 1 101 ALA 101 140 140 ALA ALA A . n A 1 102 LEU 102 141 141 LEU LEU A . n A 1 103 ASN 103 142 142 ASN ASN A . n A 1 104 ARG 104 143 143 ARG ARG A . n A 1 105 ALA 105 144 144 ALA ALA A . n A 1 106 TRP 106 145 145 TRP TRP A . n A 1 107 GLN 107 146 146 GLN GLN A . n A 1 108 VAL 108 147 147 VAL VAL A . n A 1 109 TYR 109 148 148 TYR TYR A . n A 1 110 GLY 110 149 149 GLY GLY A . n A 1 111 VAL 111 150 150 VAL VAL A . n A 1 112 PRO 112 151 151 PRO PRO A . n A 1 113 PRO 113 152 152 PRO PRO A . n A 1 114 GLU 114 153 153 GLU GLU A . n A 1 115 ILE 115 154 154 ILE ILE A . n A 1 116 ILE 116 155 155 ILE ILE A . n A 1 117 VAL 117 156 156 VAL VAL A . n A 1 118 GLY 118 157 157 GLY GLY A . n A 1 119 ILE 119 158 158 ILE ILE A . n A 1 120 ILE 120 159 159 ILE ILE A . n A 1 121 GLY 121 160 160 GLY GLY A . n A 1 122 VAL 122 161 161 VAL VAL A . n A 1 123 GLU 123 162 162 GLU GLU A . n A 1 124 THR 124 163 163 THR THR A . n A 1 125 ARG 125 164 164 ARG ARG A . n A 1 126 TRP 126 165 165 TRP TRP A . n A 1 127 GLY 127 166 166 GLY GLY A . n A 1 128 ARG 128 167 167 ARG ARG A . n A 1 129 VAL 129 168 168 VAL VAL A . n A 1 130 MET 130 169 169 MET MET A . n A 1 131 GLY 131 170 170 GLY GLY A . n A 1 132 LYS 132 171 171 LYS LYS A . n A 1 133 THR 133 172 172 THR THR A . n A 1 134 ARG 134 173 173 ARG ARG A . n A 1 135 ILE 135 174 174 ILE ILE A . n A 1 136 LEU 136 175 175 LEU LEU A . n A 1 137 ASP 137 176 176 ASP ASP A . n A 1 138 ALA 138 177 177 ALA ALA A . n A 1 139 LEU 139 178 178 LEU LEU A . n A 1 140 ALA 140 179 179 ALA ALA A . n A 1 141 THR 141 180 180 THR THR A . n A 1 142 LEU 142 181 181 LEU LEU A . n A 1 143 SER 143 182 182 SER SER A . n A 1 144 PHE 144 183 183 PHE PHE A . n A 1 145 ASN 145 184 184 ASN ASN A . n A 1 146 TYR 146 185 185 TYR TYR A . n A 1 147 PRO 147 186 186 PRO PRO A . n A 1 148 ARG 148 187 187 ARG ARG A . n A 1 149 ARG 149 188 188 ARG ARG A . n A 1 150 ALA 150 189 189 ALA ALA A . n A 1 151 GLU 151 190 190 GLU GLU A . n A 1 152 TYR 152 191 191 TYR TYR A . n A 1 153 PHE 153 192 192 PHE PHE A . n A 1 154 SER 154 193 193 SER SER A . n A 1 155 GLY 155 194 194 GLY GLY A . n A 1 156 GLU 156 195 195 GLU GLU A . n A 1 157 LEU 157 196 196 LEU LEU A . n A 1 158 GLU 158 197 197 GLU GLU A . n A 1 159 THR 159 198 198 THR THR A . n A 1 160 PHE 160 199 199 PHE PHE A . n A 1 161 LEU 161 200 200 LEU LEU A . n A 1 162 LEU 162 201 201 LEU LEU A . n A 1 163 MET 163 202 202 MET MET A . n A 1 164 ALA 164 203 203 ALA ALA A . n A 1 165 ARG 165 204 204 ARG ARG A . n A 1 166 ASP 166 205 205 ASP ASP A . n A 1 167 GLU 167 206 206 GLU GLU A . n A 1 168 GLN 168 207 207 GLN GLN A . n A 1 169 ASP 169 208 208 ASP ASP A . n A 1 170 ASP 170 209 209 ASP ASP A . n A 1 171 PRO 171 210 210 PRO PRO A . n A 1 172 LEU 172 211 211 LEU LEU A . n A 1 173 ASN 173 212 212 ASN ASN A . n A 1 174 LEU 174 213 213 LEU LEU A . n A 1 175 LYS 175 214 214 LYS LYS A . n A 1 176 GLY 176 215 215 GLY GLY A . n A 1 177 SER 177 216 216 SER SER A . n A 1 178 PHE 178 217 217 PHE PHE A . n A 1 179 ALA 179 218 218 ALA ALA A . n A 1 180 GLY 180 219 219 GLY GLY A . n A 1 181 ALA 181 220 220 ALA ALA A . n A 1 182 MET 182 221 221 MET MET A . n A 1 183 GLY 183 222 222 GLY GLY A . n A 1 184 TYR 184 223 223 TYR TYR A . n A 1 185 GLY 185 224 224 GLY GLY A . n A 1 186 GLN 186 225 225 GLN GLN A . n A 1 187 PHE 187 226 226 PHE PHE A . n A 1 188 MET 188 227 227 MET MET A . n A 1 189 PRO 189 228 228 PRO PRO A . n A 1 190 SER 190 229 229 SER SER A . n A 1 191 SER 191 230 230 SER SER A . n A 1 192 TYR 192 231 231 TYR TYR A . n A 1 193 LYS 193 232 232 LYS LYS A . n A 1 194 GLN 194 233 233 GLN GLN A . n A 1 195 TYR 195 234 234 TYR TYR A . n A 1 196 ALA 196 235 235 ALA ALA A . n A 1 197 VAL 197 236 236 VAL VAL A . n A 1 198 ASP 198 237 237 ASP ASP A . n A 1 199 PHE 199 238 238 PHE PHE A . n A 1 200 SER 200 239 239 SER SER A . n A 1 201 GLY 201 240 240 GLY GLY A . n A 1 202 ASP 202 241 241 ASP ASP A . n A 1 203 GLY 203 242 242 GLY GLY A . n A 1 204 HIS 204 243 243 HIS HIS A . n A 1 205 ILE 205 244 244 ILE ILE A . n A 1 206 ASN 206 245 245 ASN ASN A . n A 1 207 LEU 207 246 246 LEU LEU A . n A 1 208 TRP 208 247 247 TRP TRP A . n A 1 209 ASP 209 248 248 ASP ASP A . n A 1 210 PRO 210 249 249 PRO PRO A . n A 1 211 VAL 211 250 250 VAL VAL A . n A 1 212 ASP 212 251 251 ASP ASP A . n A 1 213 ALA 213 252 252 ALA ALA A . n A 1 214 ILE 214 253 253 ILE ILE A . n A 1 215 GLY 215 254 254 GLY GLY A . n A 1 216 SER 216 255 255 SER SER A . n A 1 217 VAL 217 256 256 VAL VAL A . n A 1 218 ALA 218 257 257 ALA ALA A . n A 1 219 ASN 219 258 258 ASN ASN A . n A 1 220 TYR 220 259 259 TYR TYR A . n A 1 221 PHE 221 260 260 PHE PHE A . n A 1 222 LYS 222 261 261 LYS LYS A . n A 1 223 ALA 223 262 262 ALA ALA A . n A 1 224 HIS 224 263 263 HIS HIS A . n A 1 225 GLY 225 264 264 GLY GLY A . n A 1 226 TRP 226 265 265 TRP TRP A . n A 1 227 VAL 227 266 266 VAL VAL A . n A 1 228 LYS 228 267 267 LYS LYS A . n A 1 229 GLY 229 268 268 GLY GLY A . n A 1 230 ASP 230 269 269 ASP ASP A . n A 1 231 GLN 231 270 270 GLN GLN A . n A 1 232 VAL 232 271 271 VAL VAL A . n A 1 233 ALA 233 272 272 ALA ALA A . n A 1 234 VAL 234 273 273 VAL VAL A . n A 1 235 MET 235 274 274 MET MET A . n A 1 236 ALA 236 275 275 ALA ALA A . n A 1 237 ASN 237 276 276 ASN ASN A . n A 1 238 GLY 238 277 277 GLY GLY A . n A 1 239 GLN 239 278 278 GLN GLN A . n A 1 240 ALA 240 279 279 ALA ALA A . n A 1 241 PRO 241 280 280 PRO PRO A . n A 1 242 GLY 242 281 281 GLY GLY A . n A 1 243 LEU 243 282 282 LEU LEU A . n A 1 244 PRO 244 283 283 PRO PRO A . n A 1 245 ASN 245 284 284 ASN ASN A . n A 1 246 GLY 246 285 285 GLY GLY A . n A 1 247 PHE 247 286 286 PHE PHE A . n A 1 248 LYS 248 287 287 LYS LYS A . n A 1 249 THR 249 288 288 THR THR A . n A 1 250 LYS 250 289 289 LYS LYS A . n A 1 251 TYR 251 290 290 TYR TYR A . n A 1 252 SER 252 291 291 SER SER A . n A 1 253 ILE 253 292 292 ILE ILE A . n A 1 254 SER 254 293 293 SER SER A . n A 1 255 GLN 255 294 294 GLN GLN A . n A 1 256 LEU 256 295 295 LEU LEU A . n A 1 257 ALA 257 296 296 ALA ALA A . n A 1 258 ALA 258 297 297 ALA ALA A . n A 1 259 ALA 259 298 298 ALA ALA A . n A 1 260 GLY 260 299 299 GLY GLY A . n A 1 261 LEU 261 300 300 LEU LEU A . n A 1 262 THR 262 301 301 THR THR A . n A 1 263 PRO 263 302 302 PRO PRO A . n A 1 264 GLN 264 303 303 GLN GLN A . n A 1 265 GLN 265 304 304 GLN GLN A . n A 1 266 PRO 266 305 305 PRO PRO A . n A 1 267 LEU 267 306 306 LEU LEU A . n A 1 268 GLY 268 307 307 GLY GLY A . n A 1 269 ASN 269 308 308 ASN ASN A . n A 1 270 HIS 270 309 309 HIS HIS A . n A 1 271 GLN 271 310 310 GLN GLN A . n A 1 272 GLN 272 311 311 GLN GLN A . n A 1 273 ALA 273 312 312 ALA ALA A . n A 1 274 SER 274 313 313 SER SER A . n A 1 275 LEU 275 314 314 LEU LEU A . n A 1 276 LEU 276 315 315 LEU LEU A . n A 1 277 ARG 277 316 316 ARG ARG A . n A 1 278 LEU 278 317 317 LEU LEU A . n A 1 279 ASP 279 318 318 ASP ASP A . n A 1 280 VAL 280 319 319 VAL VAL A . n A 1 281 GLY 281 320 320 GLY GLY A . n A 1 282 THR 282 321 321 THR THR A . n A 1 283 GLY 283 322 322 GLY GLY A . n A 1 284 TYR 284 323 323 TYR TYR A . n A 1 285 GLN 285 324 324 GLN GLN A . n A 1 286 TYR 286 325 325 TYR TYR A . n A 1 287 TRP 287 326 326 TRP TRP A . n A 1 288 TYR 288 327 327 TYR TYR A . n A 1 289 GLY 289 328 328 GLY GLY A . n A 1 290 LEU 290 329 329 LEU LEU A . n A 1 291 PRO 291 330 330 PRO PRO A . n A 1 292 ASN 292 331 331 ASN ASN A . n A 1 293 PHE 293 332 332 PHE PHE A . n A 1 294 TYR 294 333 333 TYR TYR A . n A 1 295 THR 295 334 334 THR THR A . n A 1 296 ILE 296 335 335 ILE ILE A . n A 1 297 THR 297 336 336 THR THR A . n A 1 298 ARG 298 337 337 ARG ARG A . n A 1 299 TYR 299 338 338 TYR TYR A . n A 1 300 ASN 300 339 339 ASN ASN A . n A 1 301 HIS 301 340 340 HIS HIS A . n A 1 302 SER 302 341 341 SER SER A . n A 1 303 THR 303 342 342 THR THR A . n A 1 304 HIS 304 343 343 HIS HIS A . n A 1 305 TYR 305 344 344 TYR TYR A . n A 1 306 ALA 306 345 345 ALA ALA A . n A 1 307 MET 307 346 346 MET MET A . n A 1 308 ALA 308 347 347 ALA ALA A . n A 1 309 VAL 309 348 348 VAL VAL A . n A 1 310 TRP 310 349 349 TRP TRP A . n A 1 311 GLN 311 350 350 GLN GLN A . n A 1 312 LEU 312 351 351 LEU LEU A . n A 1 313 GLY 313 352 352 GLY GLY A . n A 1 314 GLN 314 353 353 GLN GLN A . n A 1 315 ALA 315 354 354 ALA ALA A . n A 1 316 VAL 316 355 355 VAL VAL A . n A 1 317 ALA 317 356 356 ALA ALA A . n A 1 318 LEU 318 357 357 LEU LEU A . n A 1 319 ALA 319 358 358 ALA ALA A . n A 1 320 ARG 320 359 359 ARG ARG A . n A 1 321 VAL 321 360 360 VAL VAL A . n A 1 322 GLN 322 361 361 GLN GLN A . n # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero B 2 AMU 1 B AMU 1 ? NAM 402 n B 2 NAG 2 B NAG 2 ? NAG 401 n C 2 AMU 1 C AMU 1 ? NAM 406 n C 2 NAG 2 C NAG 2 ? NAG 405 n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 CA 1 400 400 CA CA A . E 4 ALA 1 403 403 ALA ALA A . F 5 DGL 1 404 404 DGL DGL A . G 4 ALA 1 407 407 ALA ALA A . H 5 DGL 1 408 408 DGL DGL A . I 6 GOL 1 3007 3007 GOL GOL A . J 7 HOH 1 501 501 HOH HOH A . J 7 HOH 2 502 502 HOH HOH A . J 7 HOH 3 503 503 HOH HOH A . J 7 HOH 4 504 504 HOH HOH A . J 7 HOH 5 505 505 HOH HOH A . J 7 HOH 6 506 506 HOH HOH A . J 7 HOH 7 507 507 HOH HOH A . J 7 HOH 8 508 508 HOH HOH A . J 7 HOH 9 509 509 HOH HOH A . J 7 HOH 10 510 510 HOH HOH A . J 7 HOH 11 511 511 HOH HOH A . J 7 HOH 12 512 512 HOH HOH A . J 7 HOH 13 513 513 HOH HOH A . J 7 HOH 14 515 515 HOH HOH A . J 7 HOH 15 516 516 HOH HOH A . J 7 HOH 16 517 517 HOH HOH A . J 7 HOH 17 518 518 HOH HOH A . J 7 HOH 18 519 519 HOH HOH A . J 7 HOH 19 520 520 HOH HOH A . J 7 HOH 20 521 521 HOH HOH A . J 7 HOH 21 522 522 HOH HOH A . J 7 HOH 22 523 523 HOH HOH A . J 7 HOH 23 524 524 HOH HOH A . J 7 HOH 24 525 525 HOH HOH A . J 7 HOH 25 526 526 HOH HOH A . J 7 HOH 26 527 527 HOH HOH A . J 7 HOH 27 528 528 HOH HOH A . J 7 HOH 28 529 529 HOH HOH A . J 7 HOH 29 530 530 HOH HOH A . J 7 HOH 30 531 531 HOH HOH A . J 7 HOH 31 532 532 HOH HOH A . J 7 HOH 32 534 534 HOH HOH A . J 7 HOH 33 535 535 HOH HOH A . J 7 HOH 34 536 536 HOH HOH A . J 7 HOH 35 537 537 HOH HOH A . J 7 HOH 36 538 538 HOH HOH A . J 7 HOH 37 540 540 HOH HOH A . J 7 HOH 38 541 541 HOH HOH A . J 7 HOH 39 542 542 HOH HOH A . J 7 HOH 40 543 543 HOH HOH A . J 7 HOH 41 544 544 HOH HOH A . J 7 HOH 42 545 545 HOH HOH A . J 7 HOH 43 546 546 HOH HOH A . J 7 HOH 44 547 547 HOH HOH A . J 7 HOH 45 548 548 HOH HOH A . J 7 HOH 46 549 549 HOH HOH A . J 7 HOH 47 550 550 HOH HOH A . J 7 HOH 48 551 551 HOH HOH A . J 7 HOH 49 552 552 HOH HOH A . J 7 HOH 50 553 553 HOH HOH A . J 7 HOH 51 554 554 HOH HOH A . J 7 HOH 52 555 555 HOH HOH A . J 7 HOH 53 556 556 HOH HOH A . J 7 HOH 54 557 557 HOH HOH A . J 7 HOH 55 558 558 HOH HOH A . J 7 HOH 56 559 559 HOH HOH A . J 7 HOH 57 560 560 HOH HOH A . J 7 HOH 58 561 561 HOH HOH A . J 7 HOH 59 562 562 HOH HOH A . J 7 HOH 60 563 563 HOH HOH A . J 7 HOH 61 564 564 HOH HOH A . J 7 HOH 62 565 565 HOH HOH A . J 7 HOH 63 566 566 HOH HOH A . J 7 HOH 64 567 567 HOH HOH A . J 7 HOH 65 568 568 HOH HOH A . J 7 HOH 66 570 570 HOH HOH A . J 7 HOH 67 571 571 HOH HOH A . J 7 HOH 68 572 572 HOH HOH A . J 7 HOH 69 573 573 HOH HOH A . J 7 HOH 70 574 574 HOH HOH A . J 7 HOH 71 575 575 HOH HOH A . J 7 HOH 72 576 576 HOH HOH A . J 7 HOH 73 578 578 HOH HOH A . J 7 HOH 74 579 579 HOH HOH A . J 7 HOH 75 580 580 HOH HOH A . J 7 HOH 76 581 581 HOH HOH A . J 7 HOH 77 582 582 HOH HOH A . J 7 HOH 78 583 583 HOH HOH A . J 7 HOH 79 584 584 HOH HOH A . J 7 HOH 80 585 585 HOH HOH A . J 7 HOH 81 586 586 HOH HOH A . J 7 HOH 82 587 587 HOH HOH A . J 7 HOH 83 588 588 HOH HOH A . J 7 HOH 84 589 589 HOH HOH A . J 7 HOH 85 591 591 HOH HOH A . J 7 HOH 86 592 592 HOH HOH A . J 7 HOH 87 593 593 HOH HOH A . J 7 HOH 88 594 594 HOH HOH A . J 7 HOH 89 595 595 HOH HOH A . J 7 HOH 90 598 598 HOH HOH A . J 7 HOH 91 599 599 HOH HOH A . J 7 HOH 92 600 600 HOH HOH A . J 7 HOH 93 601 601 HOH HOH A . J 7 HOH 94 602 602 HOH HOH A . J 7 HOH 95 603 603 HOH HOH A . J 7 HOH 96 604 604 HOH HOH A . J 7 HOH 97 606 606 HOH HOH A . J 7 HOH 98 608 608 HOH HOH A . J 7 HOH 99 609 609 HOH HOH A . J 7 HOH 100 611 611 HOH HOH A . J 7 HOH 101 612 612 HOH HOH A . J 7 HOH 102 613 613 HOH HOH A . J 7 HOH 103 616 616 HOH HOH A . J 7 HOH 104 617 617 HOH HOH A . J 7 HOH 105 618 618 HOH HOH A . J 7 HOH 106 620 620 HOH HOH A . J 7 HOH 107 621 621 HOH HOH A . J 7 HOH 108 622 622 HOH HOH A . J 7 HOH 109 623 623 HOH HOH A . J 7 HOH 110 625 625 HOH HOH A . J 7 HOH 111 626 626 HOH HOH A . J 7 HOH 112 627 627 HOH HOH A . J 7 HOH 113 629 629 HOH HOH A . J 7 HOH 114 630 630 HOH HOH A . J 7 HOH 115 632 632 HOH HOH A . J 7 HOH 116 633 633 HOH HOH A . J 7 HOH 117 635 635 HOH HOH A . J 7 HOH 118 637 637 HOH HOH A . J 7 HOH 119 638 638 HOH HOH A . J 7 HOH 120 639 639 HOH HOH A . J 7 HOH 121 640 640 HOH HOH A . J 7 HOH 122 642 642 HOH HOH A . J 7 HOH 123 645 645 HOH HOH A . J 7 HOH 124 646 646 HOH HOH A . J 7 HOH 125 648 648 HOH HOH A . J 7 HOH 126 649 649 HOH HOH A . J 7 HOH 127 650 650 HOH HOH A . J 7 HOH 128 651 651 HOH HOH A . J 7 HOH 129 652 652 HOH HOH A . J 7 HOH 130 653 653 HOH HOH A . J 7 HOH 131 654 654 HOH HOH A . J 7 HOH 132 655 655 HOH HOH A . J 7 HOH 133 656 656 HOH HOH A . J 7 HOH 134 657 657 HOH HOH A . J 7 HOH 135 659 659 HOH HOH A . J 7 HOH 136 664 664 HOH HOH A . J 7 HOH 137 665 665 HOH HOH A . J 7 HOH 138 666 666 HOH HOH A . J 7 HOH 139 667 667 HOH HOH A . J 7 HOH 140 668 668 HOH HOH A . J 7 HOH 141 671 671 HOH HOH A . J 7 HOH 142 672 672 HOH HOH A . J 7 HOH 143 673 673 HOH HOH A . J 7 HOH 144 674 674 HOH HOH A . J 7 HOH 145 675 675 HOH HOH A . J 7 HOH 146 677 677 HOH HOH A . J 7 HOH 147 678 678 HOH HOH A . J 7 HOH 148 681 681 HOH HOH A . J 7 HOH 149 682 682 HOH HOH A . J 7 HOH 150 684 684 HOH HOH A . J 7 HOH 151 685 685 HOH HOH A . J 7 HOH 152 686 686 HOH HOH A . J 7 HOH 153 688 688 HOH HOH A . J 7 HOH 154 690 690 HOH HOH A . J 7 HOH 155 691 691 HOH HOH A . J 7 HOH 156 694 694 HOH HOH A . J 7 HOH 157 696 696 HOH HOH A . J 7 HOH 158 697 697 HOH HOH A . J 7 HOH 159 698 698 HOH HOH A . J 7 HOH 160 699 699 HOH HOH A . J 7 HOH 161 701 701 HOH HOH A . J 7 HOH 162 703 703 HOH HOH A . J 7 HOH 163 706 706 HOH HOH A . J 7 HOH 164 710 710 HOH HOH A . J 7 HOH 165 711 711 HOH HOH A . J 7 HOH 166 714 714 HOH HOH A . J 7 HOH 167 716 716 HOH HOH A . J 7 HOH 168 717 717 HOH HOH A . J 7 HOH 169 718 718 HOH HOH A . J 7 HOH 170 720 720 HOH HOH A . J 7 HOH 171 722 722 HOH HOH A . J 7 HOH 172 723 723 HOH HOH A . J 7 HOH 173 724 724 HOH HOH A . J 7 HOH 174 725 725 HOH HOH A . J 7 HOH 175 726 726 HOH HOH A . J 7 HOH 176 728 728 HOH HOH A . J 7 HOH 177 730 730 HOH HOH A . J 7 HOH 178 731 731 HOH HOH A . J 7 HOH 179 735 735 HOH HOH A . J 7 HOH 180 736 736 HOH HOH A . J 7 HOH 181 741 741 HOH HOH A . J 7 HOH 182 743 743 HOH HOH A . J 7 HOH 183 744 744 HOH HOH A . J 7 HOH 184 745 745 HOH HOH A . J 7 HOH 185 748 748 HOH HOH A . J 7 HOH 186 752 752 HOH HOH A . J 7 HOH 187 753 753 HOH HOH A . J 7 HOH 188 755 755 HOH HOH A . J 7 HOH 189 756 756 HOH HOH A . J 7 HOH 190 761 761 HOH HOH A . J 7 HOH 191 762 762 HOH HOH A . J 7 HOH 192 765 765 HOH HOH A . J 7 HOH 193 769 769 HOH HOH A . J 7 HOH 194 772 772 HOH HOH A . J 7 HOH 195 780 780 HOH HOH A . J 7 HOH 196 786 786 HOH HOH A . J 7 HOH 197 795 795 HOH HOH A . J 7 HOH 198 799 799 HOH HOH A . J 7 HOH 199 801 801 HOH HOH A . J 7 HOH 200 803 803 HOH HOH A . J 7 HOH 201 805 805 HOH HOH A . J 7 HOH 202 812 812 HOH HOH A . J 7 HOH 203 819 819 HOH HOH A . J 7 HOH 204 821 821 HOH HOH A . J 7 HOH 205 822 822 HOH HOH A . J 7 HOH 206 823 823 HOH HOH A . J 7 HOH 207 828 828 HOH HOH A . J 7 HOH 208 833 833 HOH HOH A . J 7 HOH 209 834 834 HOH HOH A . J 7 HOH 210 840 840 HOH HOH A . J 7 HOH 211 844 844 HOH HOH A . J 7 HOH 212 864 864 HOH HOH A . J 7 HOH 213 875 875 HOH HOH A . J 7 HOH 214 878 878 HOH HOH A . J 7 HOH 215 882 882 HOH HOH A . J 7 HOH 216 883 883 HOH HOH A . J 7 HOH 217 920 920 HOH HOH A . J 7 HOH 218 921 921 HOH HOH A . J 7 HOH 219 926 926 HOH HOH A . J 7 HOH 220 946 946 HOH HOH A . J 7 HOH 221 947 947 HOH HOH A . J 7 HOH 222 964 964 HOH HOH A . J 7 HOH 223 1001 1001 HOH HOH A . J 7 HOH 224 1010 1010 HOH HOH A . J 7 HOH 225 1021 1021 HOH HOH A . J 7 HOH 226 1059 1059 HOH HOH A . J 7 HOH 227 1063 1063 HOH HOH A . J 7 HOH 228 1092 1092 HOH HOH A . J 7 HOH 229 1094 1094 HOH HOH A . J 7 HOH 230 1101 1101 HOH HOH A . J 7 HOH 231 1102 1102 HOH HOH A . J 7 HOH 232 1103 1103 HOH HOH A . J 7 HOH 233 1104 1104 HOH HOH A . J 7 HOH 234 1105 1105 HOH HOH A . J 7 HOH 235 1106 1106 HOH HOH A . J 7 HOH 236 1108 1108 HOH HOH A . J 7 HOH 237 1110 1110 HOH HOH A . J 7 HOH 238 1112 1112 HOH HOH A . J 7 HOH 239 1116 1116 HOH HOH A . J 7 HOH 240 1117 1117 HOH HOH A . J 7 HOH 241 1122 1122 HOH HOH A . J 7 HOH 242 1123 1123 HOH HOH A . J 7 HOH 243 1125 1125 HOH HOH A . J 7 HOH 244 1126 1126 HOH HOH A . J 7 HOH 245 1129 1129 HOH HOH A . J 7 HOH 246 1173 1173 HOH HOH A . J 7 HOH 247 1174 1174 HOH HOH A . J 7 HOH 248 1175 1175 HOH HOH A . J 7 HOH 249 1181 1181 HOH HOH A . J 7 HOH 250 1182 1182 HOH HOH A . J 7 HOH 251 1184 1184 HOH HOH A . J 7 HOH 252 1187 1187 HOH HOH A . J 7 HOH 253 1188 1188 HOH HOH A . J 7 HOH 254 1189 1189 HOH HOH A . J 7 HOH 255 1190 1190 HOH HOH A . J 7 HOH 256 1192 1192 HOH HOH A . J 7 HOH 257 1195 1195 HOH HOH A . J 7 HOH 258 1197 1197 HOH HOH A . J 7 HOH 259 1199 1199 HOH HOH A . J 7 HOH 260 1204 1204 HOH HOH A . J 7 HOH 261 1206 1206 HOH HOH A . J 7 HOH 262 1218 1218 HOH HOH A . J 7 HOH 263 1221 1221 HOH HOH A . J 7 HOH 264 1224 1224 HOH HOH A . J 7 HOH 265 1230 1230 HOH HOH A . J 7 HOH 266 1232 1232 HOH HOH A . J 7 HOH 267 1233 1233 HOH HOH A . J 7 HOH 268 1234 1234 HOH HOH A . J 7 HOH 269 1235 1235 HOH HOH A . J 7 HOH 270 1237 1237 HOH HOH A . J 7 HOH 271 1240 1240 HOH HOH A . J 7 HOH 272 1241 1241 HOH HOH A . J 7 HOH 273 1248 1248 HOH HOH A . J 7 HOH 274 1254 1254 HOH HOH A . J 7 HOH 275 1255 1255 HOH HOH A . J 7 HOH 276 1257 1257 HOH HOH A . J 7 HOH 277 1261 1261 HOH HOH A . J 7 HOH 278 1265 1265 HOH HOH A . J 7 HOH 279 1269 1269 HOH HOH A . J 7 HOH 280 1270 1270 HOH HOH A . J 7 HOH 281 1271 1271 HOH HOH A . J 7 HOH 282 1273 1273 HOH HOH A . J 7 HOH 283 1274 1274 HOH HOH A . J 7 HOH 284 1277 1277 HOH HOH A . J 7 HOH 285 1278 1278 HOH HOH A . J 7 HOH 286 1279 1279 HOH HOH A . J 7 HOH 287 1284 1284 HOH HOH A . J 7 HOH 288 1289 1289 HOH HOH A . J 7 HOH 289 1292 1292 HOH HOH A . J 7 HOH 290 1293 1293 HOH HOH A . J 7 HOH 291 1294 1294 HOH HOH A . J 7 HOH 292 1295 1295 HOH HOH A . J 7 HOH 293 1299 1299 HOH HOH A . J 7 HOH 294 1300 1300 HOH HOH A . J 7 HOH 295 1301 1301 HOH HOH A . J 7 HOH 296 1302 1302 HOH HOH A . J 7 HOH 297 1304 1304 HOH HOH A . J 7 HOH 298 1305 1305 HOH HOH A . J 7 HOH 299 1307 1307 HOH HOH A . J 7 HOH 300 1310 1310 HOH HOH A . J 7 HOH 301 1311 1311 HOH HOH A . J 7 HOH 302 1312 1312 HOH HOH A . J 7 HOH 303 1313 1313 HOH HOH A . J 7 HOH 304 1315 1315 HOH HOH A . J 7 HOH 305 1316 1316 HOH HOH A . J 7 HOH 306 1317 1317 HOH HOH A . J 7 HOH 307 1318 1318 HOH HOH A . J 7 HOH 308 1320 1320 HOH HOH A . J 7 HOH 309 1323 1323 HOH HOH A . J 7 HOH 310 1325 1325 HOH HOH A . J 7 HOH 311 1326 1326 HOH HOH A . J 7 HOH 312 1327 1327 HOH HOH A . J 7 HOH 313 1331 1331 HOH HOH A . J 7 HOH 314 1332 1332 HOH HOH A . J 7 HOH 315 1333 1333 HOH HOH A . J 7 HOH 316 1334 1334 HOH HOH A . J 7 HOH 317 1337 1337 HOH HOH A . J 7 HOH 318 1339 1339 HOH HOH A . J 7 HOH 319 1340 1340 HOH HOH A . J 7 HOH 320 1342 1342 HOH HOH A . J 7 HOH 321 1345 1345 HOH HOH A . J 7 HOH 322 1347 1347 HOH HOH A . J 7 HOH 323 1348 1348 HOH HOH A . J 7 HOH 324 1350 1350 HOH HOH A . J 7 HOH 325 1351 1351 HOH HOH A . J 7 HOH 326 1353 1353 HOH HOH A . J 7 HOH 327 1355 1355 HOH HOH A . J 7 HOH 328 1356 1356 HOH HOH A . J 7 HOH 329 1361 1361 HOH HOH A . J 7 HOH 330 1362 1362 HOH HOH A . J 7 HOH 331 1364 1364 HOH HOH A . J 7 HOH 332 1365 1365 HOH HOH A . J 7 HOH 333 1366 1366 HOH HOH A . J 7 HOH 334 1371 1371 HOH HOH A . J 7 HOH 335 1373 1373 HOH HOH A . J 7 HOH 336 1374 1374 HOH HOH A . J 7 HOH 337 1375 1375 HOH HOH A . J 7 HOH 338 1376 1376 HOH HOH A . J 7 HOH 339 1378 1378 HOH HOH A . J 7 HOH 340 1384 1384 HOH HOH A . J 7 HOH 341 1387 1387 HOH HOH A . J 7 HOH 342 1389 1389 HOH HOH A . J 7 HOH 343 1392 1392 HOH HOH A . J 7 HOH 344 1394 1394 HOH HOH A . J 7 HOH 345 1395 1395 HOH HOH A . J 7 HOH 346 1396 1396 HOH HOH A . J 7 HOH 347 1397 1397 HOH HOH A . J 7 HOH 348 1398 1398 HOH HOH A . J 7 HOH 349 1399 1399 HOH HOH A . J 7 HOH 350 1400 1400 HOH HOH A . J 7 HOH 351 1401 1401 HOH HOH A . J 7 HOH 352 1402 1402 HOH HOH A . J 7 HOH 353 1403 1403 HOH HOH A . J 7 HOH 354 2001 2001 HOH HOH A . J 7 HOH 355 2002 2002 HOH HOH A . J 7 HOH 356 2003 2003 HOH HOH A . J 7 HOH 357 3001 3001 HOH HOH A . J 7 HOH 358 3002 3002 HOH HOH A . J 7 HOH 359 3003 3003 HOH HOH A . J 7 HOH 360 3004 3004 HOH HOH A . J 7 HOH 361 3005 3005 HOH HOH A . J 7 HOH 362 3006 3006 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A MET 40 ? CG ? A MET 1 CG 2 1 Y 1 A MET 40 ? SD ? A MET 1 SD 3 1 Y 1 A MET 40 ? CE ? A MET 1 CE 4 1 N 1 B AMU 1 ? O11 ? B AMU 1 O11 5 1 N 1 C AMU 1 ? O11 ? C AMU 1 O11 6 1 N 1 A ALA 403 ? OXT ? E ALA 1 OXT 7 1 N 1 A ALA 407 ? OXT ? G ALA 1 OXT # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal X-PLOR 'model building' . ? 1 X-PLOR refinement 3.843 ? 2 DENZO 'data reduction' . ? 3 SCALEPACK 'data scaling' . ? 4 X-PLOR phasing . ? 5 # _cell.entry_id 1D0K _cell.length_a 58.379 _cell.length_b 67.825 _cell.length_c 98.940 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 1D0K _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # _exptl.entry_id 1D0K _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.71 _exptl_crystal.density_percent_sol 54.67 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.8 _exptl_crystal_grow.pdbx_details 'BICINE-NAOH, ISOPROPANOL, PEG20K, pH 7.8, VAPOR DIFFUSION, HANGING DROP, temperature 295K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 120 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type MACSCIENCE _diffrn_detector.pdbx_collection_date 1997-10-29 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.54 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'ENRAF-NONIUS FR591' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.54 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1D0K _reflns.observed_criterion_sigma_I -3 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 23.2 _reflns.d_resolution_high 2.02 _reflns.number_obs 26200 _reflns.number_all 108180 _reflns.percent_possible_obs 99.0 _reflns.pdbx_Rmerge_I_obs 0.0670000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 20.70 _reflns.B_iso_Wilson_estimate 9.6 _reflns.pdbx_redundancy 4.1 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.02 _reflns_shell.d_res_low 2.05 _reflns_shell.percent_possible_all 99.9 _reflns_shell.Rmerge_I_obs 0.2670000 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy 3.9 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 1D0K _refine.ls_number_reflns_obs 25892 _refine.ls_number_reflns_all 25892 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 100000.00 _refine.pdbx_data_cutoff_low_absF 0.0001 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 20.00 _refine.ls_d_res_high 2.02 _refine.ls_percent_reflns_obs 97.8 _refine.ls_R_factor_obs 0.1680000 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1650000 _refine.ls_R_factor_R_free 0.2020000 _refine.ls_R_factor_R_free_error 0.004 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.0 _refine.ls_number_reflns_R_free 2601 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean 18.2 _refine.aniso_B[1][1] 0.00 _refine.aniso_B[2][2] 0.00 _refine.aniso_B[3][3] 0.00 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'ENGH AND HUBER' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_phase_error ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1D0K _refine_analyze.Luzzati_coordinate_error_obs 0.18 _refine_analyze.Luzzati_sigma_a_obs 0.14 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.22 _refine_analyze.Luzzati_sigma_a_free 0.16 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2488 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 103 _refine_hist.number_atoms_solvent 362 _refine_hist.number_atoms_total 2953 _refine_hist.d_res_high 2.02 _refine_hist.d_res_low 20.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.006 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 1.2 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d 21.8 ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d 1.04 ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it 1.53 1.50 ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it 2.30 2.00 ? ? 'X-RAY DIFFRACTION' ? x_scbond_it 2.58 2.00 ? ? 'X-RAY DIFFRACTION' ? x_scangle_it 3.89 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 12 _refine_ls_shell.d_res_high 2.02 _refine_ls_shell.d_res_low 2.08 _refine_ls_shell.number_reflns_R_work 1837 _refine_ls_shell.R_factor_R_work 0.2050000 _refine_ls_shell.percent_reflns_obs 95.1 _refine_ls_shell.R_factor_R_free 0.2190000 _refine_ls_shell.R_factor_R_free_error 0.015 _refine_ls_shell.percent_reflns_R_free 10.4 _refine_ls_shell.number_reflns_R_free 213 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # _database_PDB_matrix.entry_id 1D0K _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1D0K _struct.title 'THE ESCHERICHIA COLI LYTIC TRANSGLYCOSYLASE SLT35 IN COMPLEX WITH TWO MURODIPEPTIDES (GLCNAC-MURNAC-L-ALA-D-GLU)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1D0K _struct_keywords.pdbx_keywords TRANSFERASE _struct_keywords.text 'ALPHA-HELICAL PROTEIN WITH A FIVE-STRANDED ANTIPARALLEL BETA-SHEET, GLYCOSYLTRANSFERASE, EF-HAND, TRANSFERASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 5 ? G N N 4 ? H N N 5 ? I N N 6 ? J N N 7 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code MLTB_ECOLI _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession P41052 _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1D0K _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 322 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P41052 _struct_ref_seq.db_align_beg 40 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 361 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 40 _struct_ref_seq.pdbx_auth_seq_align_end 361 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1D0K MET A 1 ? UNP P41052 LEU 40 'engineered mutation' 40 1 1 1D0K VAL A 2 ? UNP P41052 LEU 41 'engineered mutation' 41 2 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 18 ? GLY A 33 ? ASN A 57 GLY A 72 1 ? 16 HELX_P HELX_P2 2 ASP A 35 ? SER A 44 ? ASP A 74 SER A 83 1 ? 10 HELX_P HELX_P3 3 LEU A 49 ? GLN A 59 ? LEU A 88 GLN A 98 1 ? 11 HELX_P HELX_P4 4 GLY A 73 ? ILE A 83 ? GLY A 112 ILE A 122 1 ? 11 HELX_P HELX_P5 5 THR A 84 ? TYR A 98 ? THR A 123 TYR A 137 1 ? 15 HELX_P HELX_P6 6 TYR A 98 ? GLY A 110 ? TYR A 137 GLY A 149 1 ? 13 HELX_P HELX_P7 7 PRO A 112 ? ARG A 125 ? PRO A 151 ARG A 164 1 ? 14 HELX_P HELX_P8 8 ILE A 135 ? ASN A 145 ? ILE A 174 ASN A 184 1 ? 11 HELX_P HELX_P9 9 TYR A 146 ? ARG A 148 ? TYR A 185 ARG A 187 5 ? 3 HELX_P HELX_P10 10 ARG A 149 ? GLU A 167 ? ARG A 188 GLU A 206 1 ? 19 HELX_P HELX_P11 11 ASP A 170 ? ASN A 173 ? ASP A 209 ASN A 212 5 ? 4 HELX_P HELX_P12 12 MET A 188 ? ALA A 196 ? MET A 227 ALA A 235 1 ? 9 HELX_P HELX_P13 13 ASP A 209 ? HIS A 224 ? ASP A 248 HIS A 263 1 ? 16 HELX_P HELX_P14 14 ILE A 253 ? ALA A 259 ? ILE A 292 ALA A 298 1 ? 7 HELX_P HELX_P15 15 LEU A 290 ? ARG A 298 ? LEU A 329 ARG A 337 1 ? 9 HELX_P HELX_P16 16 SER A 302 ? GLN A 322 ? SER A 341 GLN A 361 1 ? 21 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B AMU . O4 ? ? ? 1_555 B NAG . C1 A ? B AMU 1 B NAG 2 1_555 ? ? ? ? ? ? ? 1.437 ? ? covale2 covale both ? C AMU . O4 ? ? ? 1_555 C NAG . C1 ? ? C AMU 1 C NAG 2 1_555 ? ? ? ? ? ? ? 1.433 ? ? metalc1 metalc ? ? A ASP 198 OD1 ? ? ? 1_555 D CA . CA ? ? A ASP 237 A CA 400 1_555 ? ? ? ? ? ? ? 2.409 ? ? metalc2 metalc ? ? A SER 200 OG ? ? ? 1_555 D CA . CA ? ? A SER 239 A CA 400 1_555 ? ? ? ? ? ? ? 2.424 ? ? metalc3 metalc ? ? A ASP 202 OD1 ? ? ? 1_555 D CA . CA ? ? A ASP 241 A CA 400 1_555 ? ? ? ? ? ? ? 2.452 ? ? metalc4 metalc ? ? A HIS 204 O ? ? ? 1_555 D CA . CA ? ? A HIS 243 A CA 400 1_555 ? ? ? ? ? ? ? 2.370 ? ? metalc5 metalc ? ? A ASP 212 OD2 ? ? ? 1_555 D CA . CA ? ? A ASP 251 A CA 400 1_555 ? ? ? ? ? ? ? 2.497 ? ? metalc6 metalc ? ? A ASP 212 OD1 ? ? ? 1_555 D CA . CA ? ? A ASP 251 A CA 400 1_555 ? ? ? ? ? ? ? 2.663 ? ? metalc7 metalc ? ? D CA . CA ? ? ? 1_555 J HOH . O ? ? A CA 400 A HOH 574 1_555 ? ? ? ? ? ? ? 2.428 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD1 ? A ASP 198 ? A ASP 237 ? 1_555 CA ? D CA . ? A CA 400 ? 1_555 OG ? A SER 200 ? A SER 239 ? 1_555 87.4 ? 2 OD1 ? A ASP 198 ? A ASP 237 ? 1_555 CA ? D CA . ? A CA 400 ? 1_555 OD1 ? A ASP 202 ? A ASP 241 ? 1_555 77.1 ? 3 OG ? A SER 200 ? A SER 239 ? 1_555 CA ? D CA . ? A CA 400 ? 1_555 OD1 ? A ASP 202 ? A ASP 241 ? 1_555 81.1 ? 4 OD1 ? A ASP 198 ? A ASP 237 ? 1_555 CA ? D CA . ? A CA 400 ? 1_555 O ? A HIS 204 ? A HIS 243 ? 1_555 77.7 ? 5 OG ? A SER 200 ? A SER 239 ? 1_555 CA ? D CA . ? A CA 400 ? 1_555 O ? A HIS 204 ? A HIS 243 ? 1_555 159.5 ? 6 OD1 ? A ASP 202 ? A ASP 241 ? 1_555 CA ? D CA . ? A CA 400 ? 1_555 O ? A HIS 204 ? A HIS 243 ? 1_555 81.8 ? 7 OD1 ? A ASP 198 ? A ASP 237 ? 1_555 CA ? D CA . ? A CA 400 ? 1_555 OD2 ? A ASP 212 ? A ASP 251 ? 1_555 105.9 ? 8 OG ? A SER 200 ? A SER 239 ? 1_555 CA ? D CA . ? A CA 400 ? 1_555 OD2 ? A ASP 212 ? A ASP 251 ? 1_555 123.2 ? 9 OD1 ? A ASP 202 ? A ASP 241 ? 1_555 CA ? D CA . ? A CA 400 ? 1_555 OD2 ? A ASP 212 ? A ASP 251 ? 1_555 155.3 ? 10 O ? A HIS 204 ? A HIS 243 ? 1_555 CA ? D CA . ? A CA 400 ? 1_555 OD2 ? A ASP 212 ? A ASP 251 ? 1_555 75.1 ? 11 OD1 ? A ASP 198 ? A ASP 237 ? 1_555 CA ? D CA . ? A CA 400 ? 1_555 OD1 ? A ASP 212 ? A ASP 251 ? 1_555 93.0 ? 12 OG ? A SER 200 ? A SER 239 ? 1_555 CA ? D CA . ? A CA 400 ? 1_555 OD1 ? A ASP 212 ? A ASP 251 ? 1_555 74.8 ? 13 OD1 ? A ASP 202 ? A ASP 241 ? 1_555 CA ? D CA . ? A CA 400 ? 1_555 OD1 ? A ASP 212 ? A ASP 251 ? 1_555 154.3 ? 14 O ? A HIS 204 ? A HIS 243 ? 1_555 CA ? D CA . ? A CA 400 ? 1_555 OD1 ? A ASP 212 ? A ASP 251 ? 1_555 119.5 ? 15 OD2 ? A ASP 212 ? A ASP 251 ? 1_555 CA ? D CA . ? A CA 400 ? 1_555 OD1 ? A ASP 212 ? A ASP 251 ? 1_555 50.1 ? 16 OD1 ? A ASP 198 ? A ASP 237 ? 1_555 CA ? D CA . ? A CA 400 ? 1_555 O ? J HOH . ? A HOH 574 ? 1_555 165.0 ? 17 OG ? A SER 200 ? A SER 239 ? 1_555 CA ? D CA . ? A CA 400 ? 1_555 O ? J HOH . ? A HOH 574 ? 1_555 84.1 ? 18 OD1 ? A ASP 202 ? A ASP 241 ? 1_555 CA ? D CA . ? A CA 400 ? 1_555 O ? J HOH . ? A HOH 574 ? 1_555 89.4 ? 19 O ? A HIS 204 ? A HIS 243 ? 1_555 CA ? D CA . ? A CA 400 ? 1_555 O ? J HOH . ? A HOH 574 ? 1_555 107.0 ? 20 OD2 ? A ASP 212 ? A ASP 251 ? 1_555 CA ? D CA . ? A CA 400 ? 1_555 O ? J HOH . ? A HOH 574 ? 1_555 89.1 ? 21 OD1 ? A ASP 212 ? A ASP 251 ? 1_555 CA ? D CA . ? A CA 400 ? 1_555 O ? J HOH . ? A HOH 574 ? 1_555 96.7 ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLY _struct_mon_prot_cis.label_seq_id 70 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLY _struct_mon_prot_cis.auth_seq_id 109 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 71 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 110 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 0.20 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 133 ? ARG A 134 ? THR A 172 ARG A 173 A 2 LYS A 175 ? GLY A 176 ? LYS A 214 GLY A 215 B 1 GLY A 246 ? SER A 252 ? GLY A 285 SER A 291 B 2 GLN A 272 ? ASP A 279 ? GLN A 311 ASP A 318 B 3 TYR A 284 ? GLY A 289 ? TYR A 323 GLY A 328 B 4 ALA A 233 ? ASN A 237 ? ALA A 272 ASN A 276 B 5 THR A 262 ? PRO A 263 ? THR A 301 PRO A 302 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O THR A 133 ? O THR A 172 N GLY A 176 ? N GLY A 215 B 1 2 O TYR A 251 ? O TYR A 290 N ALA A 273 ? N ALA A 312 B 2 3 N LEU A 278 ? N LEU A 317 O GLN A 285 ? O GLN A 324 B 3 4 N TYR A 288 ? N TYR A 327 O VAL A 234 ? O VAL A 273 B 4 5 N ASN A 237 ? N ASN A 276 O THR A 262 ? O THR A 301 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 C A ALA 407 ? ? N A DGL 408 ? ? 1.33 2 1 C10 C AMU 1 ? ? N A ALA 407 ? ? 1.34 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR A 163 ? ? -140.03 13.16 2 1 TYR A 185 ? ? -151.66 79.63 3 1 HIS A 340 ? ? -67.21 73.26 # _pdbx_validate_chiral.id 1 _pdbx_validate_chiral.PDB_model_num 1 _pdbx_validate_chiral.auth_atom_id C1 _pdbx_validate_chiral.label_alt_id ? _pdbx_validate_chiral.auth_asym_id C _pdbx_validate_chiral.auth_comp_id AMU _pdbx_validate_chiral.auth_seq_id 1 _pdbx_validate_chiral.PDB_ins_code ? _pdbx_validate_chiral.details 'WRONG HAND' _pdbx_validate_chiral.omega . # _pdbx_entry_details.entry_id 1D0K _pdbx_entry_details.compound_details ;THREE DOMAIN STRUCTURE: ALPHA DOMAIN WITH RESIDUES 40-98, 170-215, BETA DOMAIN WITH RESIDUES 270-329, CORE DOMAIN WITH RESIDUES 109-169, 216-269, 330-361. ; _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ;THE COORDINATES CONTAIN A MURODIPEPTIDE: (GLCNAC-MURNAC-L-ALA-D-GLU). MURODIPEPTIDE A (RESIDUES 401-404) HAS AN OCCUPANCY OF 0.5 AND BINDS IN SUBSITES -2 AND -1. GLYCEROL 3007 AND WATER MOLECULES 3001-3006 ALSO HAVE AN OCCUPANCY OF 0.5 AND ARE LOCATED IN SUBSITES -2 AND -1, RESPECTIVELY. MURODIPEPTIDE B (RESIDUES 405-408) BINDS IN SUBSITES +1 AND +2. ; _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A THR 101 ? A THR 62 2 1 Y 1 A THR 102 ? A THR 63 3 1 Y 1 A SER 103 ? A SER 64 4 1 Y 1 A VAL 104 ? A VAL 65 5 1 Y 1 A LYS 105 ? A LYS 66 6 1 Y 1 A PRO 106 ? A PRO 67 7 1 Y 1 A PRO 107 ? A PRO 68 8 1 Y 1 A SER 108 ? A SER 69 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 AMU C1 C N R 14 AMU C2 C N R 15 AMU C3 C N R 16 AMU C4 C N S 17 AMU C5 C N R 18 AMU C6 C N N 19 AMU C7 C N N 20 AMU C8 C N N 21 AMU C9 C N R 22 AMU C10 C N N 23 AMU C11 C N N 24 AMU O1 O N N 25 AMU O3 O N N 26 AMU O4 O N N 27 AMU O5 O N N 28 AMU O6 O N N 29 AMU O7 O N N 30 AMU O10 O N N 31 AMU O11 O N N 32 AMU N2 N N N 33 AMU H1 H N N 34 AMU H2 H N N 35 AMU H3 H N N 36 AMU H4 H N N 37 AMU H5 H N N 38 AMU H61 H N N 39 AMU H62 H N N 40 AMU H81 H N N 41 AMU H82 H N N 42 AMU H83 H N N 43 AMU H9 H N N 44 AMU H111 H N N 45 AMU H112 H N N 46 AMU H113 H N N 47 AMU HO1 H N N 48 AMU HO4 H N N 49 AMU HO6 H N N 50 AMU HO11 H N N 51 AMU HN2 H N N 52 ARG N N N N 53 ARG CA C N S 54 ARG C C N N 55 ARG O O N N 56 ARG CB C N N 57 ARG CG C N N 58 ARG CD C N N 59 ARG NE N N N 60 ARG CZ C N N 61 ARG NH1 N N N 62 ARG NH2 N N N 63 ARG OXT O N N 64 ARG H H N N 65 ARG H2 H N N 66 ARG HA H N N 67 ARG HB2 H N N 68 ARG HB3 H N N 69 ARG HG2 H N N 70 ARG HG3 H N N 71 ARG HD2 H N N 72 ARG HD3 H N N 73 ARG HE H N N 74 ARG HH11 H N N 75 ARG HH12 H N N 76 ARG HH21 H N N 77 ARG HH22 H N N 78 ARG HXT H N N 79 ASN N N N N 80 ASN CA C N S 81 ASN C C N N 82 ASN O O N N 83 ASN CB C N N 84 ASN CG C N N 85 ASN OD1 O N N 86 ASN ND2 N N N 87 ASN OXT O N N 88 ASN H H N N 89 ASN H2 H N N 90 ASN HA H N N 91 ASN HB2 H N N 92 ASN HB3 H N N 93 ASN HD21 H N N 94 ASN HD22 H N N 95 ASN HXT H N N 96 ASP N N N N 97 ASP CA C N S 98 ASP C C N N 99 ASP O O N N 100 ASP CB C N N 101 ASP CG C N N 102 ASP OD1 O N N 103 ASP OD2 O N N 104 ASP OXT O N N 105 ASP H H N N 106 ASP H2 H N N 107 ASP HA H N N 108 ASP HB2 H N N 109 ASP HB3 H N N 110 ASP HD2 H N N 111 ASP HXT H N N 112 CA CA CA N N 113 DGL N N N N 114 DGL CA C N R 115 DGL C C N N 116 DGL O O N N 117 DGL CB C N N 118 DGL CG C N N 119 DGL CD C N N 120 DGL OE1 O N N 121 DGL OE2 O N N 122 DGL OXT O N N 123 DGL H H N N 124 DGL H2 H N N 125 DGL HA H N N 126 DGL HB2 H N N 127 DGL HB3 H N N 128 DGL HG2 H N N 129 DGL HG3 H N N 130 DGL HE2 H N N 131 DGL HXT H N N 132 GLN N N N N 133 GLN CA C N S 134 GLN C C N N 135 GLN O O N N 136 GLN CB C N N 137 GLN CG C N N 138 GLN CD C N N 139 GLN OE1 O N N 140 GLN NE2 N N N 141 GLN OXT O N N 142 GLN H H N N 143 GLN H2 H N N 144 GLN HA H N N 145 GLN HB2 H N N 146 GLN HB3 H N N 147 GLN HG2 H N N 148 GLN HG3 H N N 149 GLN HE21 H N N 150 GLN HE22 H N N 151 GLN HXT H N N 152 GLU N N N N 153 GLU CA C N S 154 GLU C C N N 155 GLU O O N N 156 GLU CB C N N 157 GLU CG C N N 158 GLU CD C N N 159 GLU OE1 O N N 160 GLU OE2 O N N 161 GLU OXT O N N 162 GLU H H N N 163 GLU H2 H N N 164 GLU HA H N N 165 GLU HB2 H N N 166 GLU HB3 H N N 167 GLU HG2 H N N 168 GLU HG3 H N N 169 GLU HE2 H N N 170 GLU HXT H N N 171 GLY N N N N 172 GLY CA C N N 173 GLY C C N N 174 GLY O O N N 175 GLY OXT O N N 176 GLY H H N N 177 GLY H2 H N N 178 GLY HA2 H N N 179 GLY HA3 H N N 180 GLY HXT H N N 181 GOL C1 C N N 182 GOL O1 O N N 183 GOL C2 C N N 184 GOL O2 O N N 185 GOL C3 C N N 186 GOL O3 O N N 187 GOL H11 H N N 188 GOL H12 H N N 189 GOL HO1 H N N 190 GOL H2 H N N 191 GOL HO2 H N N 192 GOL H31 H N N 193 GOL H32 H N N 194 GOL HO3 H N N 195 HIS N N N N 196 HIS CA C N S 197 HIS C C N N 198 HIS O O N N 199 HIS CB C N N 200 HIS CG C Y N 201 HIS ND1 N Y N 202 HIS CD2 C Y N 203 HIS CE1 C Y N 204 HIS NE2 N Y N 205 HIS OXT O N N 206 HIS H H N N 207 HIS H2 H N N 208 HIS HA H N N 209 HIS HB2 H N N 210 HIS HB3 H N N 211 HIS HD1 H N N 212 HIS HD2 H N N 213 HIS HE1 H N N 214 HIS HE2 H N N 215 HIS HXT H N N 216 HOH O O N N 217 HOH H1 H N N 218 HOH H2 H N N 219 ILE N N N N 220 ILE CA C N S 221 ILE C C N N 222 ILE O O N N 223 ILE CB C N S 224 ILE CG1 C N N 225 ILE CG2 C N N 226 ILE CD1 C N N 227 ILE OXT O N N 228 ILE H H N N 229 ILE H2 H N N 230 ILE HA H N N 231 ILE HB H N N 232 ILE HG12 H N N 233 ILE HG13 H N N 234 ILE HG21 H N N 235 ILE HG22 H N N 236 ILE HG23 H N N 237 ILE HD11 H N N 238 ILE HD12 H N N 239 ILE HD13 H N N 240 ILE HXT H N N 241 LEU N N N N 242 LEU CA C N S 243 LEU C C N N 244 LEU O O N N 245 LEU CB C N N 246 LEU CG C N N 247 LEU CD1 C N N 248 LEU CD2 C N N 249 LEU OXT O N N 250 LEU H H N N 251 LEU H2 H N N 252 LEU HA H N N 253 LEU HB2 H N N 254 LEU HB3 H N N 255 LEU HG H N N 256 LEU HD11 H N N 257 LEU HD12 H N N 258 LEU HD13 H N N 259 LEU HD21 H N N 260 LEU HD22 H N N 261 LEU HD23 H N N 262 LEU HXT H N N 263 LYS N N N N 264 LYS CA C N S 265 LYS C C N N 266 LYS O O N N 267 LYS CB C N N 268 LYS CG C N N 269 LYS CD C N N 270 LYS CE C N N 271 LYS NZ N N N 272 LYS OXT O N N 273 LYS H H N N 274 LYS H2 H N N 275 LYS HA H N N 276 LYS HB2 H N N 277 LYS HB3 H N N 278 LYS HG2 H N N 279 LYS HG3 H N N 280 LYS HD2 H N N 281 LYS HD3 H N N 282 LYS HE2 H N N 283 LYS HE3 H N N 284 LYS HZ1 H N N 285 LYS HZ2 H N N 286 LYS HZ3 H N N 287 LYS HXT H N N 288 MET N N N N 289 MET CA C N S 290 MET C C N N 291 MET O O N N 292 MET CB C N N 293 MET CG C N N 294 MET SD S N N 295 MET CE C N N 296 MET OXT O N N 297 MET H H N N 298 MET H2 H N N 299 MET HA H N N 300 MET HB2 H N N 301 MET HB3 H N N 302 MET HG2 H N N 303 MET HG3 H N N 304 MET HE1 H N N 305 MET HE2 H N N 306 MET HE3 H N N 307 MET HXT H N N 308 NAG C1 C N R 309 NAG C2 C N R 310 NAG C3 C N R 311 NAG C4 C N S 312 NAG C5 C N R 313 NAG C6 C N N 314 NAG C7 C N N 315 NAG C8 C N N 316 NAG N2 N N N 317 NAG O1 O N N 318 NAG O3 O N N 319 NAG O4 O N N 320 NAG O5 O N N 321 NAG O6 O N N 322 NAG O7 O N N 323 NAG H1 H N N 324 NAG H2 H N N 325 NAG H3 H N N 326 NAG H4 H N N 327 NAG H5 H N N 328 NAG H61 H N N 329 NAG H62 H N N 330 NAG H81 H N N 331 NAG H82 H N N 332 NAG H83 H N N 333 NAG HN2 H N N 334 NAG HO1 H N N 335 NAG HO3 H N N 336 NAG HO4 H N N 337 NAG HO6 H N N 338 PHE N N N N 339 PHE CA C N S 340 PHE C C N N 341 PHE O O N N 342 PHE CB C N N 343 PHE CG C Y N 344 PHE CD1 C Y N 345 PHE CD2 C Y N 346 PHE CE1 C Y N 347 PHE CE2 C Y N 348 PHE CZ C Y N 349 PHE OXT O N N 350 PHE H H N N 351 PHE H2 H N N 352 PHE HA H N N 353 PHE HB2 H N N 354 PHE HB3 H N N 355 PHE HD1 H N N 356 PHE HD2 H N N 357 PHE HE1 H N N 358 PHE HE2 H N N 359 PHE HZ H N N 360 PHE HXT H N N 361 PRO N N N N 362 PRO CA C N S 363 PRO C C N N 364 PRO O O N N 365 PRO CB C N N 366 PRO CG C N N 367 PRO CD C N N 368 PRO OXT O N N 369 PRO H H N N 370 PRO HA H N N 371 PRO HB2 H N N 372 PRO HB3 H N N 373 PRO HG2 H N N 374 PRO HG3 H N N 375 PRO HD2 H N N 376 PRO HD3 H N N 377 PRO HXT H N N 378 SER N N N N 379 SER CA C N S 380 SER C C N N 381 SER O O N N 382 SER CB C N N 383 SER OG O N N 384 SER OXT O N N 385 SER H H N N 386 SER H2 H N N 387 SER HA H N N 388 SER HB2 H N N 389 SER HB3 H N N 390 SER HG H N N 391 SER HXT H N N 392 THR N N N N 393 THR CA C N S 394 THR C C N N 395 THR O O N N 396 THR CB C N R 397 THR OG1 O N N 398 THR CG2 C N N 399 THR OXT O N N 400 THR H H N N 401 THR H2 H N N 402 THR HA H N N 403 THR HB H N N 404 THR HG1 H N N 405 THR HG21 H N N 406 THR HG22 H N N 407 THR HG23 H N N 408 THR HXT H N N 409 TRP N N N N 410 TRP CA C N S 411 TRP C C N N 412 TRP O O N N 413 TRP CB C N N 414 TRP CG C Y N 415 TRP CD1 C Y N 416 TRP CD2 C Y N 417 TRP NE1 N Y N 418 TRP CE2 C Y N 419 TRP CE3 C Y N 420 TRP CZ2 C Y N 421 TRP CZ3 C Y N 422 TRP CH2 C Y N 423 TRP OXT O N N 424 TRP H H N N 425 TRP H2 H N N 426 TRP HA H N N 427 TRP HB2 H N N 428 TRP HB3 H N N 429 TRP HD1 H N N 430 TRP HE1 H N N 431 TRP HE3 H N N 432 TRP HZ2 H N N 433 TRP HZ3 H N N 434 TRP HH2 H N N 435 TRP HXT H N N 436 TYR N N N N 437 TYR CA C N S 438 TYR C C N N 439 TYR O O N N 440 TYR CB C N N 441 TYR CG C Y N 442 TYR CD1 C Y N 443 TYR CD2 C Y N 444 TYR CE1 C Y N 445 TYR CE2 C Y N 446 TYR CZ C Y N 447 TYR OH O N N 448 TYR OXT O N N 449 TYR H H N N 450 TYR H2 H N N 451 TYR HA H N N 452 TYR HB2 H N N 453 TYR HB3 H N N 454 TYR HD1 H N N 455 TYR HD2 H N N 456 TYR HE1 H N N 457 TYR HE2 H N N 458 TYR HH H N N 459 TYR HXT H N N 460 VAL N N N N 461 VAL CA C N S 462 VAL C C N N 463 VAL O O N N 464 VAL CB C N N 465 VAL CG1 C N N 466 VAL CG2 C N N 467 VAL OXT O N N 468 VAL H H N N 469 VAL H2 H N N 470 VAL HA H N N 471 VAL HB H N N 472 VAL HG11 H N N 473 VAL HG12 H N N 474 VAL HG13 H N N 475 VAL HG21 H N N 476 VAL HG22 H N N 477 VAL HG23 H N N 478 VAL HXT H N N 479 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 AMU C1 C2 sing N N 13 AMU C1 O1 sing N N 14 AMU C1 O5 sing N N 15 AMU C1 H1 sing N N 16 AMU C2 C3 sing N N 17 AMU C2 N2 sing N N 18 AMU C2 H2 sing N N 19 AMU C3 C4 sing N N 20 AMU C3 O3 sing N N 21 AMU C3 H3 sing N N 22 AMU C4 C5 sing N N 23 AMU C4 O4 sing N N 24 AMU C4 H4 sing N N 25 AMU C5 C6 sing N N 26 AMU C5 O5 sing N N 27 AMU C5 H5 sing N N 28 AMU C6 O6 sing N N 29 AMU C6 H61 sing N N 30 AMU C6 H62 sing N N 31 AMU C7 C8 sing N N 32 AMU C7 O7 doub N N 33 AMU C7 N2 sing N N 34 AMU C8 H81 sing N N 35 AMU C8 H82 sing N N 36 AMU C8 H83 sing N N 37 AMU C9 C10 sing N N 38 AMU C9 C11 sing N N 39 AMU C9 O3 sing N N 40 AMU C9 H9 sing N N 41 AMU C10 O10 doub N N 42 AMU C10 O11 sing N N 43 AMU C11 H111 sing N N 44 AMU C11 H112 sing N N 45 AMU C11 H113 sing N N 46 AMU O1 HO1 sing N N 47 AMU O4 HO4 sing N N 48 AMU O6 HO6 sing N N 49 AMU O11 HO11 sing N N 50 AMU N2 HN2 sing N N 51 ARG N CA sing N N 52 ARG N H sing N N 53 ARG N H2 sing N N 54 ARG CA C sing N N 55 ARG CA CB sing N N 56 ARG CA HA sing N N 57 ARG C O doub N N 58 ARG C OXT sing N N 59 ARG CB CG sing N N 60 ARG CB HB2 sing N N 61 ARG CB HB3 sing N N 62 ARG CG CD sing N N 63 ARG CG HG2 sing N N 64 ARG CG HG3 sing N N 65 ARG CD NE sing N N 66 ARG CD HD2 sing N N 67 ARG CD HD3 sing N N 68 ARG NE CZ sing N N 69 ARG NE HE sing N N 70 ARG CZ NH1 sing N N 71 ARG CZ NH2 doub N N 72 ARG NH1 HH11 sing N N 73 ARG NH1 HH12 sing N N 74 ARG NH2 HH21 sing N N 75 ARG NH2 HH22 sing N N 76 ARG OXT HXT sing N N 77 ASN N CA sing N N 78 ASN N H sing N N 79 ASN N H2 sing N N 80 ASN CA C sing N N 81 ASN CA CB sing N N 82 ASN CA HA sing N N 83 ASN C O doub N N 84 ASN C OXT sing N N 85 ASN CB CG sing N N 86 ASN CB HB2 sing N N 87 ASN CB HB3 sing N N 88 ASN CG OD1 doub N N 89 ASN CG ND2 sing N N 90 ASN ND2 HD21 sing N N 91 ASN ND2 HD22 sing N N 92 ASN OXT HXT sing N N 93 ASP N CA sing N N 94 ASP N H sing N N 95 ASP N H2 sing N N 96 ASP CA C sing N N 97 ASP CA CB sing N N 98 ASP CA HA sing N N 99 ASP C O doub N N 100 ASP C OXT sing N N 101 ASP CB CG sing N N 102 ASP CB HB2 sing N N 103 ASP CB HB3 sing N N 104 ASP CG OD1 doub N N 105 ASP CG OD2 sing N N 106 ASP OD2 HD2 sing N N 107 ASP OXT HXT sing N N 108 DGL N CA sing N N 109 DGL N H sing N N 110 DGL N H2 sing N N 111 DGL CA C sing N N 112 DGL CA CB sing N N 113 DGL CA HA sing N N 114 DGL C O doub N N 115 DGL C OXT sing N N 116 DGL CB CG sing N N 117 DGL CB HB2 sing N N 118 DGL CB HB3 sing N N 119 DGL CG CD sing N N 120 DGL CG HG2 sing N N 121 DGL CG HG3 sing N N 122 DGL CD OE1 doub N N 123 DGL CD OE2 sing N N 124 DGL OE2 HE2 sing N N 125 DGL OXT HXT sing N N 126 GLN N CA sing N N 127 GLN N H sing N N 128 GLN N H2 sing N N 129 GLN CA C sing N N 130 GLN CA CB sing N N 131 GLN CA HA sing N N 132 GLN C O doub N N 133 GLN C OXT sing N N 134 GLN CB CG sing N N 135 GLN CB HB2 sing N N 136 GLN CB HB3 sing N N 137 GLN CG CD sing N N 138 GLN CG HG2 sing N N 139 GLN CG HG3 sing N N 140 GLN CD OE1 doub N N 141 GLN CD NE2 sing N N 142 GLN NE2 HE21 sing N N 143 GLN NE2 HE22 sing N N 144 GLN OXT HXT sing N N 145 GLU N CA sing N N 146 GLU N H sing N N 147 GLU N H2 sing N N 148 GLU CA C sing N N 149 GLU CA CB sing N N 150 GLU CA HA sing N N 151 GLU C O doub N N 152 GLU C OXT sing N N 153 GLU CB CG sing N N 154 GLU CB HB2 sing N N 155 GLU CB HB3 sing N N 156 GLU CG CD sing N N 157 GLU CG HG2 sing N N 158 GLU CG HG3 sing N N 159 GLU CD OE1 doub N N 160 GLU CD OE2 sing N N 161 GLU OE2 HE2 sing N N 162 GLU OXT HXT sing N N 163 GLY N CA sing N N 164 GLY N H sing N N 165 GLY N H2 sing N N 166 GLY CA C sing N N 167 GLY CA HA2 sing N N 168 GLY CA HA3 sing N N 169 GLY C O doub N N 170 GLY C OXT sing N N 171 GLY OXT HXT sing N N 172 GOL C1 O1 sing N N 173 GOL C1 C2 sing N N 174 GOL C1 H11 sing N N 175 GOL C1 H12 sing N N 176 GOL O1 HO1 sing N N 177 GOL C2 O2 sing N N 178 GOL C2 C3 sing N N 179 GOL C2 H2 sing N N 180 GOL O2 HO2 sing N N 181 GOL C3 O3 sing N N 182 GOL C3 H31 sing N N 183 GOL C3 H32 sing N N 184 GOL O3 HO3 sing N N 185 HIS N CA sing N N 186 HIS N H sing N N 187 HIS N H2 sing N N 188 HIS CA C sing N N 189 HIS CA CB sing N N 190 HIS CA HA sing N N 191 HIS C O doub N N 192 HIS C OXT sing N N 193 HIS CB CG sing N N 194 HIS CB HB2 sing N N 195 HIS CB HB3 sing N N 196 HIS CG ND1 sing Y N 197 HIS CG CD2 doub Y N 198 HIS ND1 CE1 doub Y N 199 HIS ND1 HD1 sing N N 200 HIS CD2 NE2 sing Y N 201 HIS CD2 HD2 sing N N 202 HIS CE1 NE2 sing Y N 203 HIS CE1 HE1 sing N N 204 HIS NE2 HE2 sing N N 205 HIS OXT HXT sing N N 206 HOH O H1 sing N N 207 HOH O H2 sing N N 208 ILE N CA sing N N 209 ILE N H sing N N 210 ILE N H2 sing N N 211 ILE CA C sing N N 212 ILE CA CB sing N N 213 ILE CA HA sing N N 214 ILE C O doub N N 215 ILE C OXT sing N N 216 ILE CB CG1 sing N N 217 ILE CB CG2 sing N N 218 ILE CB HB sing N N 219 ILE CG1 CD1 sing N N 220 ILE CG1 HG12 sing N N 221 ILE CG1 HG13 sing N N 222 ILE CG2 HG21 sing N N 223 ILE CG2 HG22 sing N N 224 ILE CG2 HG23 sing N N 225 ILE CD1 HD11 sing N N 226 ILE CD1 HD12 sing N N 227 ILE CD1 HD13 sing N N 228 ILE OXT HXT sing N N 229 LEU N CA sing N N 230 LEU N H sing N N 231 LEU N H2 sing N N 232 LEU CA C sing N N 233 LEU CA CB sing N N 234 LEU CA HA sing N N 235 LEU C O doub N N 236 LEU C OXT sing N N 237 LEU CB CG sing N N 238 LEU CB HB2 sing N N 239 LEU CB HB3 sing N N 240 LEU CG CD1 sing N N 241 LEU CG CD2 sing N N 242 LEU CG HG sing N N 243 LEU CD1 HD11 sing N N 244 LEU CD1 HD12 sing N N 245 LEU CD1 HD13 sing N N 246 LEU CD2 HD21 sing N N 247 LEU CD2 HD22 sing N N 248 LEU CD2 HD23 sing N N 249 LEU OXT HXT sing N N 250 LYS N CA sing N N 251 LYS N H sing N N 252 LYS N H2 sing N N 253 LYS CA C sing N N 254 LYS CA CB sing N N 255 LYS CA HA sing N N 256 LYS C O doub N N 257 LYS C OXT sing N N 258 LYS CB CG sing N N 259 LYS CB HB2 sing N N 260 LYS CB HB3 sing N N 261 LYS CG CD sing N N 262 LYS CG HG2 sing N N 263 LYS CG HG3 sing N N 264 LYS CD CE sing N N 265 LYS CD HD2 sing N N 266 LYS CD HD3 sing N N 267 LYS CE NZ sing N N 268 LYS CE HE2 sing N N 269 LYS CE HE3 sing N N 270 LYS NZ HZ1 sing N N 271 LYS NZ HZ2 sing N N 272 LYS NZ HZ3 sing N N 273 LYS OXT HXT sing N N 274 MET N CA sing N N 275 MET N H sing N N 276 MET N H2 sing N N 277 MET CA C sing N N 278 MET CA CB sing N N 279 MET CA HA sing N N 280 MET C O doub N N 281 MET C OXT sing N N 282 MET CB CG sing N N 283 MET CB HB2 sing N N 284 MET CB HB3 sing N N 285 MET CG SD sing N N 286 MET CG HG2 sing N N 287 MET CG HG3 sing N N 288 MET SD CE sing N N 289 MET CE HE1 sing N N 290 MET CE HE2 sing N N 291 MET CE HE3 sing N N 292 MET OXT HXT sing N N 293 NAG C1 C2 sing N N 294 NAG C1 O1 sing N N 295 NAG C1 O5 sing N N 296 NAG C1 H1 sing N N 297 NAG C2 C3 sing N N 298 NAG C2 N2 sing N N 299 NAG C2 H2 sing N N 300 NAG C3 C4 sing N N 301 NAG C3 O3 sing N N 302 NAG C3 H3 sing N N 303 NAG C4 C5 sing N N 304 NAG C4 O4 sing N N 305 NAG C4 H4 sing N N 306 NAG C5 C6 sing N N 307 NAG C5 O5 sing N N 308 NAG C5 H5 sing N N 309 NAG C6 O6 sing N N 310 NAG C6 H61 sing N N 311 NAG C6 H62 sing N N 312 NAG C7 C8 sing N N 313 NAG C7 N2 sing N N 314 NAG C7 O7 doub N N 315 NAG C8 H81 sing N N 316 NAG C8 H82 sing N N 317 NAG C8 H83 sing N N 318 NAG N2 HN2 sing N N 319 NAG O1 HO1 sing N N 320 NAG O3 HO3 sing N N 321 NAG O4 HO4 sing N N 322 NAG O6 HO6 sing N N 323 PHE N CA sing N N 324 PHE N H sing N N 325 PHE N H2 sing N N 326 PHE CA C sing N N 327 PHE CA CB sing N N 328 PHE CA HA sing N N 329 PHE C O doub N N 330 PHE C OXT sing N N 331 PHE CB CG sing N N 332 PHE CB HB2 sing N N 333 PHE CB HB3 sing N N 334 PHE CG CD1 doub Y N 335 PHE CG CD2 sing Y N 336 PHE CD1 CE1 sing Y N 337 PHE CD1 HD1 sing N N 338 PHE CD2 CE2 doub Y N 339 PHE CD2 HD2 sing N N 340 PHE CE1 CZ doub Y N 341 PHE CE1 HE1 sing N N 342 PHE CE2 CZ sing Y N 343 PHE CE2 HE2 sing N N 344 PHE CZ HZ sing N N 345 PHE OXT HXT sing N N 346 PRO N CA sing N N 347 PRO N CD sing N N 348 PRO N H sing N N 349 PRO CA C sing N N 350 PRO CA CB sing N N 351 PRO CA HA sing N N 352 PRO C O doub N N 353 PRO C OXT sing N N 354 PRO CB CG sing N N 355 PRO CB HB2 sing N N 356 PRO CB HB3 sing N N 357 PRO CG CD sing N N 358 PRO CG HG2 sing N N 359 PRO CG HG3 sing N N 360 PRO CD HD2 sing N N 361 PRO CD HD3 sing N N 362 PRO OXT HXT sing N N 363 SER N CA sing N N 364 SER N H sing N N 365 SER N H2 sing N N 366 SER CA C sing N N 367 SER CA CB sing N N 368 SER CA HA sing N N 369 SER C O doub N N 370 SER C OXT sing N N 371 SER CB OG sing N N 372 SER CB HB2 sing N N 373 SER CB HB3 sing N N 374 SER OG HG sing N N 375 SER OXT HXT sing N N 376 THR N CA sing N N 377 THR N H sing N N 378 THR N H2 sing N N 379 THR CA C sing N N 380 THR CA CB sing N N 381 THR CA HA sing N N 382 THR C O doub N N 383 THR C OXT sing N N 384 THR CB OG1 sing N N 385 THR CB CG2 sing N N 386 THR CB HB sing N N 387 THR OG1 HG1 sing N N 388 THR CG2 HG21 sing N N 389 THR CG2 HG22 sing N N 390 THR CG2 HG23 sing N N 391 THR OXT HXT sing N N 392 TRP N CA sing N N 393 TRP N H sing N N 394 TRP N H2 sing N N 395 TRP CA C sing N N 396 TRP CA CB sing N N 397 TRP CA HA sing N N 398 TRP C O doub N N 399 TRP C OXT sing N N 400 TRP CB CG sing N N 401 TRP CB HB2 sing N N 402 TRP CB HB3 sing N N 403 TRP CG CD1 doub Y N 404 TRP CG CD2 sing Y N 405 TRP CD1 NE1 sing Y N 406 TRP CD1 HD1 sing N N 407 TRP CD2 CE2 doub Y N 408 TRP CD2 CE3 sing Y N 409 TRP NE1 CE2 sing Y N 410 TRP NE1 HE1 sing N N 411 TRP CE2 CZ2 sing Y N 412 TRP CE3 CZ3 doub Y N 413 TRP CE3 HE3 sing N N 414 TRP CZ2 CH2 doub Y N 415 TRP CZ2 HZ2 sing N N 416 TRP CZ3 CH2 sing Y N 417 TRP CZ3 HZ3 sing N N 418 TRP CH2 HH2 sing N N 419 TRP OXT HXT sing N N 420 TYR N CA sing N N 421 TYR N H sing N N 422 TYR N H2 sing N N 423 TYR CA C sing N N 424 TYR CA CB sing N N 425 TYR CA HA sing N N 426 TYR C O doub N N 427 TYR C OXT sing N N 428 TYR CB CG sing N N 429 TYR CB HB2 sing N N 430 TYR CB HB3 sing N N 431 TYR CG CD1 doub Y N 432 TYR CG CD2 sing Y N 433 TYR CD1 CE1 sing Y N 434 TYR CD1 HD1 sing N N 435 TYR CD2 CE2 doub Y N 436 TYR CD2 HD2 sing N N 437 TYR CE1 CZ doub Y N 438 TYR CE1 HE1 sing N N 439 TYR CE2 CZ sing Y N 440 TYR CE2 HE2 sing N N 441 TYR CZ OH sing N N 442 TYR OH HH sing N N 443 TYR OXT HXT sing N N 444 VAL N CA sing N N 445 VAL N H sing N N 446 VAL N H2 sing N N 447 VAL CA C sing N N 448 VAL CA CB sing N N 449 VAL CA HA sing N N 450 VAL C O doub N N 451 VAL C OXT sing N N 452 VAL CB CG1 sing N N 453 VAL CB CG2 sing N N 454 VAL CB HB sing N N 455 VAL CG1 HG11 sing N N 456 VAL CG1 HG12 sing N N 457 VAL CG1 HG13 sing N N 458 VAL CG2 HG21 sing N N 459 VAL CG2 HG22 sing N N 460 VAL CG2 HG23 sing N N 461 VAL OXT HXT sing N N 462 # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 AMU 1 n 2 NAG 2 n # _atom_sites.entry_id 1D0K _atom_sites.fract_transf_matrix[1][1] 0.017129 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014744 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010107 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA N O S # loop_