HEADER GENE REGULATION 20-SEP-99 1D1N TITLE SOLUTION STRUCTURE OF THE FMET-TRNAFMET BINDING DOMAIN OF BECILLUS TITLE 2 STEAROTHERMOPHILLUS TRANSLATION INITIATION FACTOR IF2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: INITIATION FACTOR 2; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: C2 TERMINAL DOMAIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GEOBACILLUS STEAROTHERMOPHILUS; SOURCE 3 ORGANISM_TAXID: 1422; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_VECTOR: PXP401C-2 KEYWDS BETA-BARREL, GENE REGULATION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR S.MEUNIER,S.SPURIO,M.CZISCH,R.WECHSELBERGER,M.GUEUNNEUGUES REVDAT 4 16-FEB-22 1D1N 1 REMARK REVDAT 3 24-FEB-09 1D1N 1 VERSN REVDAT 2 01-APR-03 1D1N 1 JRNL REVDAT 1 20-SEP-00 1D1N 0 JRNL AUTH S.MEUNIER,R.SPURIO,M.CZISCH,R.WECHSELBERGER,M.GUENNEUGUES, JRNL AUTH 2 C.O.GUALERZI,R.BOELENS JRNL TITL STRUCTURE OF THE FMET-TRNA(FMET)-BINDING DOMAIN OF B. JRNL TITL 2 STEAROTHERMOPHILUS INITIATION FACTOR IF2. JRNL REF EMBO J. V. 19 1918 2000 JRNL REFN ISSN 0261-4189 JRNL PMID 10775275 JRNL DOI 10.1093/EMBOJ/19.8.1918 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NULL REMARK 3 AUTHORS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1D1N COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-SEP-99. REMARK 100 THE DEPOSITION ID IS D_1000009712. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : NULL REMARK 210 PH : NULL REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : NULL REMARK 210 SAMPLE CONTENTS : NULL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : NULL REMARK 210 SPECTROMETER FIELD STRENGTH : NULL REMARK 210 SPECTROMETER MODEL : NULL REMARK 210 SPECTROMETER MANUFACTURER : NULL REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : NULL REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 50 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH ACCEPTABLE REMARK 210 COVALENT GEOMETRY,STRUCTURES REMARK 210 WITH FAVORABLE NON- BOND ENERGY, REMARK 210 STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS,STRUCTURES REMARK 210 WITH THE LOWEST ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (RES=RESIDUE NAME; REMARK 470 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 470 MODELS 1-20 REMARK 470 RES CSSEQI ATOMS REMARK 470 ALA A 241 O REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 H ARG A 154 O GLY A 167 1.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LYS A 146 -169.13 -59.17 REMARK 500 1 GLN A 155 -163.83 -162.38 REMARK 500 1 SER A 160 34.71 -91.36 REMARK 500 1 LYS A 161 -32.15 -150.84 REMARK 500 1 VAL A 162 -103.31 -102.11 REMARK 500 1 THR A 164 35.11 -153.87 REMARK 500 1 ILE A 165 95.57 -42.13 REMARK 500 1 ASP A 172 -144.66 -150.85 REMARK 500 1 ARG A 185 -156.22 -86.37 REMARK 500 1 ILE A 188 -159.74 -150.40 REMARK 500 1 VAL A 208 75.83 -151.18 REMARK 500 1 GLN A 210 -73.49 83.94 REMARK 500 1 LYS A 219 -144.72 45.51 REMARK 500 1 LYS A 225 115.87 58.01 REMARK 500 1 GLU A 226 66.62 3.64 REMARK 500 1 ASP A 228 -148.38 -164.95 REMARK 500 1 VAL A 234 -162.33 -176.64 REMARK 500 1 GLN A 236 36.82 -96.48 REMARK 500 1 ALA A 239 -62.73 70.53 REMARK 500 2 GLU A 145 -72.57 -89.74 REMARK 500 2 LYS A 146 168.14 64.57 REMARK 500 2 GLN A 155 -159.05 -164.29 REMARK 500 2 SER A 160 35.91 -91.95 REMARK 500 2 LYS A 161 -34.04 -150.85 REMARK 500 2 VAL A 162 -102.04 -102.18 REMARK 500 2 THR A 164 34.46 -153.37 REMARK 500 2 ILE A 165 95.20 -42.15 REMARK 500 2 ASP A 172 -144.28 -150.36 REMARK 500 2 ARG A 185 -150.85 -85.74 REMARK 500 2 ILE A 188 -156.68 -120.61 REMARK 500 2 ARG A 200 -157.99 -87.96 REMARK 500 2 LYS A 202 -60.77 -94.51 REMARK 500 2 VAL A 208 77.00 -150.93 REMARK 500 2 GLN A 210 -75.50 85.77 REMARK 500 2 LYS A 219 -144.33 42.50 REMARK 500 2 LYS A 225 147.74 63.53 REMARK 500 2 GLU A 226 87.98 -36.58 REMARK 500 2 ASP A 228 -146.91 -163.71 REMARK 500 2 VAL A 234 -169.83 178.46 REMARK 500 2 GLU A 237 40.16 -150.61 REMARK 500 2 ALA A 239 -62.38 71.25 REMARK 500 3 GLU A 144 -168.50 -75.18 REMARK 500 3 LYS A 146 -168.05 -71.35 REMARK 500 3 GLN A 155 -162.29 -162.40 REMARK 500 3 SER A 160 35.68 -90.15 REMARK 500 3 LYS A 161 -32.40 -150.41 REMARK 500 3 VAL A 162 -103.23 -102.85 REMARK 500 3 THR A 164 34.65 -153.49 REMARK 500 3 ILE A 165 98.11 -40.86 REMARK 500 3 ASP A 172 -146.42 -150.07 REMARK 500 REMARK 500 THIS ENTRY HAS 438 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL DBREF 1D1N A 143 241 UNP P04766 IF2_BACST 643 741 SEQRES 1 A 99 TYR GLU GLU LYS VAL ILE GLY GLN ALA GLU VAL ARG GLN SEQRES 2 A 99 THR PHE LYS VAL SER LYS VAL GLY THR ILE ALA GLY CYS SEQRES 3 A 99 TYR VAL THR ASP GLY LYS ILE THR ARG ASP SER LYS VAL SEQRES 4 A 99 ARG LEU ILE ARG GLN GLY ILE VAL VAL TYR GLU GLY GLU SEQRES 5 A 99 ILE ASP SER LEU LYS ARG TYR LYS ASP ASP VAL ARG GLU SEQRES 6 A 99 VAL ALA GLN GLY TYR GLU CYS GLY LEU THR ILE LYS ASN SEQRES 7 A 99 PHE ASN ASP ILE LYS GLU GLY ASP VAL ILE GLU ALA TYR SEQRES 8 A 99 VAL MET GLN GLU VAL ALA ARG ALA SHEET 1 A 5 SER A 197 LYS A 199 0 SHEET 2 A 5 GLU A 213 THR A 217 -1 O GLY A 215 N LYS A 199 SHEET 3 A 5 ALA A 166 VAL A 170 -1 O ALA A 166 N LEU A 216 SHEET 4 A 5 VAL A 147 VAL A 153 -1 O GLU A 152 N TYR A 169 SHEET 5 A 5 VAL A 229 TYR A 233 -1 O ILE A 230 N ALA A 151 SHEET 1 B 2 LYS A 180 ILE A 184 0 SHEET 2 B 2 VAL A 189 GLU A 194 -1 N VAL A 190 O LEU A 183 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1