data_1D55 # _entry.id 1D55 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.280 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1D55 WWPDB D_1000172656 # _pdbx_database_PDB_obs_spr.id OBSLTE _pdbx_database_PDB_obs_spr.date 1995-10-15 _pdbx_database_PDB_obs_spr.pdb_id 2D55 _pdbx_database_PDB_obs_spr.replace_pdb_id 1D55 _pdbx_database_PDB_obs_spr.details ? # _pdbx_database_status.entry_id 1D55 _pdbx_database_status.status_code OBS _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.recvd_initial_deposition_date 1992-02-10 _pdbx_database_status.deposit_site BNL _pdbx_database_status.process_site BNL _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Kamitori, S.' 1 'Takusagawa, F.' 2 # _citation.id primary _citation.title 'Crystal Structure of the 2:1 Complex between D(/Gaagcttc) and the Anticancer Drug Actinomycin D' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 225 _citation.page_first 445 _citation.page_last ? _citation.year 1992 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Kamitori, S.' 1 primary 'Takusagawa, F.' 2 # _cell.entry_id 1D55 _cell.length_a 51.370 _cell.length_b 62.090 _cell.length_c 25.040 _cell.angle_alpha 90.00 _cell.angle_beta 113.80 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1D55 _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 non-polymer syn ;DNA (5'-D(*GP*AP*AP*GP*CP*TP*TP*C)-3') ; 2585.587 2 ? ? ? ? 2 non-polymer man THREONINE 485.573 2 ? ? ? ? 3 non-polymer syn 2-AMINO-1,9-DICARBONYL-4,6-DIMETHYL-10-DEHYDRO-PHENOXAZIN-3-ONE 296.277 1 ? ? ? ? 4 non-polymer syn 'METHYL GROUP' 16.042 2 ? ? ? ? 5 water nat water 18.015 107 ? ? ? ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CH3 non-polymer . 'METHYL GROUP' ? 'C H4' 16.042 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 HOH non-polymer . WATER ? 'H2 O' 18.015 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 PXZ non-polymer . 2-AMINO-1,9-DICARBONYL-4,6-DIMETHYL-10-DEHYDRO-PHENOXAZIN-3-ONE PHENOXAZINE 'C16 H12 N2 O4' 296.277 SAR 'peptide linking' n SARCOSINE ? 'C3 H7 N O2' 89.093 T 'DNA linking' . "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1D55 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.04 _exptl_crystal.density_percent_sol 59.49 _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _refine.entry_id 1D55 _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low ? _refine.ls_d_res_high 3.0 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 66 _refine_hist.pdbx_number_atoms_nucleic_acid 322 _refine_hist.pdbx_number_atoms_ligand 24 _refine_hist.number_atoms_solvent 107 _refine_hist.number_atoms_total 519 _refine_hist.d_res_high 3.0 _refine_hist.d_res_low . _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function o_bond_d ? ? ? ? 'X-RAY DIFFRACTION' ? o_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? o_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? o_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? o_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? o_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? o_angle_deg ? ? ? ? 'X-RAY DIFFRACTION' ? o_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? o_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? o_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? o_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? o_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? o_improper_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? o_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? o_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? o_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? o_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? o_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? o_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _struct.entry_id 1D55 _struct.title 'CRYSTAL STRUCTURE OF THE 2:1 COMPLEX BETWEEN $D(/GAAGCTTC$) AND THE ANTICANCER DRUG ACTINOMYCIN D' _struct.pdbx_descriptor 'PROTEIN/DNA Complex, 2-AMINO-1,9-DICARBONYL-4,6-DIMETHYL-10-DEHYDRO-PHENOXAZIN-3-ONE, METHYL GROUP' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1D55 _struct_keywords.pdbx_keywords DNA _struct_keywords.text DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 4 ? G N N 4 ? H N N 5 ? # _struct_biol.id 1 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order hydrog1 hydrog ? ? A G . N1 ? ? ? 1_555 B C . N3 ? ? A G 1 B C 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog2 hydrog ? ? A G . N2 ? ? ? 1_555 B C . O2 ? ? A G 1 B C 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog3 hydrog ? ? A G . O6 ? ? ? 1_555 B C . N4 ? ? A G 1 B C 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog4 hydrog ? ? A A . N1 ? ? ? 1_555 B T . N3 ? ? A A 2 B T 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog5 hydrog ? ? A A . N6 ? ? ? 1_555 B T . O4 ? ? A A 2 B T 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog6 hydrog ? ? A A . N1 ? ? ? 1_555 B T . N3 ? ? A A 3 B T 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog7 hydrog ? ? A A . N6 ? ? ? 1_555 B T . O4 ? ? A A 3 B T 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog8 hydrog ? ? A G . N1 ? ? ? 1_555 B C . N3 ? ? A G 4 B C 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog9 hydrog ? ? A G . N2 ? ? ? 1_555 B C . O2 ? ? A G 4 B C 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog10 hydrog ? ? A G . O6 ? ? ? 1_555 B C . N4 ? ? A G 4 B C 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog11 hydrog ? ? A C . N3 ? ? ? 1_555 B G . N1 ? ? A C 5 B G 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog12 hydrog ? ? A C . N4 ? ? ? 1_555 B G . O6 ? ? A C 5 B G 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog13 hydrog ? ? A C . O2 ? ? ? 1_555 B G . N2 ? ? A C 5 B G 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog14 hydrog ? ? A T . N3 ? ? ? 1_555 B A . N1 ? ? A T 6 B A 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog15 hydrog ? ? A T . O4 ? ? ? 1_555 B A . N6 ? ? A T 6 B A 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog16 hydrog ? ? A T . N3 ? ? ? 1_555 B A . N1 ? ? A T 7 B A 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog17 hydrog ? ? A T . O4 ? ? ? 1_555 B A . N6 ? ? A T 7 B A 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog18 hydrog ? ? A C . N3 ? ? ? 1_555 B G . N1 ? ? A C 8 B G 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog19 hydrog ? ? A C . N4 ? ? ? 1_555 B G . O6 ? ? A C 8 B G 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog20 hydrog ? ? A C . O2 ? ? ? 1_555 B G . N2 ? ? A C 8 B G 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _database_PDB_matrix.entry_id 1D55 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1D55 _atom_sites.fract_transf_matrix[1][1] 0.019467 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.008586 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016106 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.043648 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_sites_footnote.id _atom_sites_footnote.text 1 'VALINES 2 I AND 2 J OF ACTINOMYCIN D ARE D-VALINES.' 2 'THE METHYL GROUP IS ATTACHED TO THE NITROGEN ATOM OF VAL 5 OF THE CYCLIC POLYPEPTIDE RINGS OF ACTINOMYCIN D.' # loop_ _atom_type.symbol C N O P # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code A 1 G 1 1 1 G G A . A 1 A 2 2 2 A A A . A 1 A 3 3 3 A A A . A 1 G 4 4 4 G G A . A 1 C 5 5 5 C C A . A 1 T 6 6 6 T T A . A 1 T 7 7 7 T T A . A 1 C 8 8 8 C C A . B 1 G 1 9 9 G G B . B 1 A 2 10 10 A A B . B 1 A 3 11 11 A A B . B 1 G 4 12 12 G G B . B 1 C 5 13 13 C C B . B 1 T 6 14 14 T T B . B 1 T 7 15 15 T T B . B 1 C 8 16 16 C C B . C 2 THR 1 1 1 THR THR I . C 2 VAL 2 2 2 VAL VAL I . C 2 PRO 3 3 3 PRO PRO I . C 2 SAR 4 4 4 SAR SAR I . C 2 VAL 5 5 5 VAL VAL I . D 2 THR 1 1 1 THR THR J . D 2 VAL 2 2 2 VAL VAL J . D 2 PRO 3 3 3 PRO PRO J . D 2 SAR 4 4 4 SAR SAR J . D 2 VAL 5 5 5 VAL VAL J . E 3 PXZ 1 17 17 PXZ PXZ ? . F 4 CH3 1 5 5 CH3 CH3 I . G 4 CH3 1 5 5 CH3 CH3 J . H 5 HOH 1 28 28 HOH HOH ? . H 5 HOH 2 29 29 HOH HOH ? . H 5 HOH 3 30 30 HOH HOH ? . H 5 HOH 4 31 31 HOH HOH ? . H 5 HOH 5 32 32 HOH HOH ? . H 5 HOH 6 33 33 HOH HOH ? . H 5 HOH 7 34 34 HOH HOH ? . H 5 HOH 8 35 35 HOH HOH ? . H 5 HOH 9 36 36 HOH HOH ? . H 5 HOH 10 37 37 HOH HOH ? . H 5 HOH 11 38 38 HOH HOH ? . H 5 HOH 12 39 39 HOH HOH ? . H 5 HOH 13 40 40 HOH HOH ? . H 5 HOH 14 41 41 HOH HOH ? . H 5 HOH 15 42 42 HOH HOH ? . H 5 HOH 16 43 43 HOH HOH ? . H 5 HOH 17 44 44 HOH HOH ? . H 5 HOH 18 45 45 HOH HOH ? . H 5 HOH 19 46 46 HOH HOH ? . H 5 HOH 20 47 47 HOH HOH ? . H 5 HOH 21 48 48 HOH HOH ? . H 5 HOH 22 49 49 HOH HOH ? . H 5 HOH 23 50 50 HOH HOH ? . H 5 HOH 24 51 51 HOH HOH ? . H 5 HOH 25 52 52 HOH HOH ? . H 5 HOH 26 53 53 HOH HOH ? . H 5 HOH 27 54 54 HOH HOH ? . H 5 HOH 28 55 55 HOH HOH ? . H 5 HOH 29 56 56 HOH HOH ? . H 5 HOH 30 57 57 HOH HOH ? . H 5 HOH 31 58 58 HOH HOH ? . H 5 HOH 32 59 59 HOH HOH ? . H 5 HOH 33 60 60 HOH HOH ? . H 5 HOH 34 61 61 HOH HOH ? . H 5 HOH 35 62 62 HOH HOH ? . H 5 HOH 36 63 63 HOH HOH ? . H 5 HOH 37 64 64 HOH HOH ? . H 5 HOH 38 65 65 HOH HOH ? . H 5 HOH 39 66 66 HOH HOH ? . H 5 HOH 40 67 67 HOH HOH ? . H 5 HOH 41 68 68 HOH HOH ? . H 5 HOH 42 69 69 HOH HOH ? . H 5 HOH 43 70 70 HOH HOH ? . H 5 HOH 44 71 71 HOH HOH ? . H 5 HOH 45 72 72 HOH HOH ? . H 5 HOH 46 73 73 HOH HOH ? . H 5 HOH 47 74 74 HOH HOH ? . H 5 HOH 48 75 75 HOH HOH ? . H 5 HOH 49 76 76 HOH HOH ? . H 5 HOH 50 77 77 HOH HOH ? . H 5 HOH 51 78 78 HOH HOH ? . H 5 HOH 52 79 79 HOH HOH ? . H 5 HOH 53 80 80 HOH HOH ? . H 5 HOH 54 81 81 HOH HOH ? . H 5 HOH 55 82 82 HOH HOH ? . H 5 HOH 56 83 83 HOH HOH ? . H 5 HOH 57 84 84 HOH HOH ? . H 5 HOH 58 85 85 HOH HOH ? . H 5 HOH 59 86 86 HOH HOH ? . H 5 HOH 60 87 87 HOH HOH ? . H 5 HOH 61 88 88 HOH HOH ? . H 5 HOH 62 89 89 HOH HOH ? . H 5 HOH 63 90 90 HOH HOH ? . H 5 HOH 64 91 91 HOH HOH ? . H 5 HOH 65 92 92 HOH HOH ? . H 5 HOH 66 93 93 HOH HOH ? . H 5 HOH 67 94 94 HOH HOH ? . H 5 HOH 68 95 95 HOH HOH ? . H 5 HOH 69 96 96 HOH HOH ? . H 5 HOH 70 97 97 HOH HOH ? . H 5 HOH 71 98 98 HOH HOH ? . H 5 HOH 72 99 99 HOH HOH ? . H 5 HOH 73 100 100 HOH HOH ? . H 5 HOH 74 101 101 HOH HOH ? . H 5 HOH 75 102 102 HOH HOH ? . H 5 HOH 76 103 103 HOH HOH ? . H 5 HOH 77 104 104 HOH HOH ? . H 5 HOH 78 105 105 HOH HOH ? . H 5 HOH 79 106 106 HOH HOH ? . H 5 HOH 80 107 107 HOH HOH ? . H 5 HOH 81 108 108 HOH HOH ? . H 5 HOH 82 109 109 HOH HOH ? . H 5 HOH 83 110 110 HOH HOH ? . H 5 HOH 84 111 111 HOH HOH ? . H 5 HOH 85 112 112 HOH HOH ? . H 5 HOH 86 113 113 HOH HOH ? . H 5 HOH 87 114 114 HOH HOH ? . H 5 HOH 88 115 115 HOH HOH ? . H 5 HOH 89 116 116 HOH HOH ? . H 5 HOH 90 117 117 HOH HOH ? . H 5 HOH 91 118 118 HOH HOH ? . H 5 HOH 92 119 119 HOH HOH ? . H 5 HOH 93 120 120 HOH HOH ? . H 5 HOH 94 121 121 HOH HOH ? . H 5 HOH 95 122 122 HOH HOH ? . H 5 HOH 96 123 123 HOH HOH ? . H 5 HOH 97 124 124 HOH HOH ? . H 5 HOH 98 125 125 HOH HOH ? . H 5 HOH 99 126 126 HOH HOH ? . H 5 HOH 100 127 127 HOH HOH ? . H 5 HOH 101 128 128 HOH HOH ? . H 5 HOH 102 129 129 HOH HOH ? . H 5 HOH 103 130 130 HOH HOH ? . H 5 HOH 104 131 131 HOH HOH ? . H 5 HOH 105 132 132 HOH HOH ? . H 5 HOH 106 133 133 HOH HOH ? . H 5 HOH 107 134 134 HOH HOH ? . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1993-10-31 2 'Structure model' 1 1 1995-10-15 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description 1 1 'Structure model' repository 'Initial release' ? 2 2 'Structure model' repository Obsolete ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 C I THR 1 ? ? N I VAL 2 ? ? 1.34 2 1 N I THR 1 ? ? C . PXZ 17 ? ? 1.34 3 1 C I PRO 3 ? ? N I SAR 4 ? ? 1.35 4 1 C J PRO 3 ? ? N J SAR 4 ? ? 1.35 5 1 C I VAL 2 ? ? N I PRO 3 ? ? 1.35 6 1 C J VAL 2 ? ? N J PRO 3 ? ? 1.35 7 1 N J THR 1 ? ? C* . PXZ 17 ? ? 1.36 8 1 C J SAR 4 ? ? N J VAL 5 ? ? 1.37 9 1 OG1 J THR 1 ? ? C J VAL 5 ? ? 1.37 10 1 C I SAR 4 ? ? N I VAL 5 ? ? 1.38 11 1 OG1 I THR 1 ? ? C I VAL 5 ? ? 1.40 12 1 C J THR 1 ? ? N J VAL 2 ? ? 1.41 13 1 N J VAL 5 ? ? C J CH3 5 ? ? 1.48 14 1 N I VAL 5 ? ? C I CH3 5 ? ? 1.49 15 1 O3* A A 3 ? ? P A G 4 ? ? 1.61 16 1 O3* B C 13 ? ? P B T 14 ? ? 1.61 17 1 O3* B T 15 ? ? P B C 16 ? ? 1.61 18 1 O3* B A 11 ? ? P B G 12 ? ? 1.63 19 1 O3* A T 7 ? ? P A C 8 ? ? 1.63 20 1 O3* A C 5 ? ? P A T 6 ? ? 1.63 21 1 O3* A A 2 ? ? P A A 3 ? ? 1.63 22 1 O3* B A 10 ? ? P B A 11 ? ? 1.64 23 1 O3* B G 12 ? ? P B C 13 ? ? 1.64 24 1 O3* A T 6 ? ? P A T 7 ? ? 1.64 25 1 O3* B T 14 ? ? P B T 15 ? ? 1.64 26 1 O3* A G 4 ? ? P A C 5 ? ? 1.69 27 1 O3* B G 9 ? ? P B A 10 ? ? 1.70 28 1 O3* A G 1 ? ? P A A 2 ? ? 1.71 29 1 N I THR 1 ? ? O . PXZ 17 ? ? 2.15 30 1 OG1 J THR 1 ? ? O J VAL 5 ? ? 2.16 31 1 OG1 I THR 1 ? ? O I VAL 5 ? ? 2.19 # loop_ _pdbx_validate_chiral.id _pdbx_validate_chiral.PDB_model_num _pdbx_validate_chiral.auth_atom_id _pdbx_validate_chiral.label_alt_id _pdbx_validate_chiral.auth_asym_id _pdbx_validate_chiral.auth_comp_id _pdbx_validate_chiral.auth_seq_id _pdbx_validate_chiral.PDB_ins_code _pdbx_validate_chiral.details _pdbx_validate_chiral.omega 1 1 CA ? I VAL 2 ? 'WRONG HAND' . 2 1 CA ? J VAL 2 ? 'WRONG HAND' . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 N 1 A G 1 ? OP3 ? A G 1 OP3 2 1 N 1 A G 1 ? P ? A G 1 P 3 1 N 1 A G 1 ? OP1 ? A G 1 OP1 4 1 N 1 A G 1 ? OP2 ? A G 1 OP2 5 1 N 1 A G 1 ? "O5'" ? A G 1 "O5'" 6 1 N 1 A G 1 ? "C5'" ? A G 1 "C5'" 7 1 N 1 A G 1 ? "C4'" ? A G 1 "C4'" 8 1 N 1 A G 1 ? "O4'" ? A G 1 "O4'" 9 1 N 1 A G 1 ? "C3'" ? A G 1 "C3'" 10 1 N 1 A G 1 ? "O3'" ? A G 1 "O3'" 11 1 N 1 A G 1 ? "C2'" ? A G 1 "C2'" 12 1 N 1 A G 1 ? "O2'" ? A G 1 "O2'" 13 1 N 1 A G 1 ? "C1'" ? A G 1 "C1'" 14 1 N 1 A A 2 ? OP3 ? A A 2 OP3 15 1 N 1 A A 2 ? OP1 ? A A 2 OP1 16 1 N 1 A A 2 ? OP2 ? A A 2 OP2 17 1 N 1 A A 2 ? "O5'" ? A A 2 "O5'" 18 1 N 1 A A 2 ? "C5'" ? A A 2 "C5'" 19 1 N 1 A A 2 ? "C4'" ? A A 2 "C4'" 20 1 N 1 A A 2 ? "O4'" ? A A 2 "O4'" 21 1 N 1 A A 2 ? "C3'" ? A A 2 "C3'" 22 1 N 1 A A 2 ? "O3'" ? A A 2 "O3'" 23 1 N 1 A A 2 ? "C2'" ? A A 2 "C2'" 24 1 N 1 A A 2 ? "O2'" ? A A 2 "O2'" 25 1 N 1 A A 2 ? "C1'" ? A A 2 "C1'" 26 1 N 1 A A 3 ? OP3 ? A A 3 OP3 27 1 N 1 A A 3 ? OP1 ? A A 3 OP1 28 1 N 1 A A 3 ? OP2 ? A A 3 OP2 29 1 N 1 A A 3 ? "O5'" ? A A 3 "O5'" 30 1 N 1 A A 3 ? "C5'" ? A A 3 "C5'" 31 1 N 1 A A 3 ? "C4'" ? A A 3 "C4'" 32 1 N 1 A A 3 ? "O4'" ? A A 3 "O4'" 33 1 N 1 A A 3 ? "C3'" ? A A 3 "C3'" 34 1 N 1 A A 3 ? "O3'" ? A A 3 "O3'" 35 1 N 1 A A 3 ? "C2'" ? A A 3 "C2'" 36 1 N 1 A A 3 ? "O2'" ? A A 3 "O2'" 37 1 N 1 A A 3 ? "C1'" ? A A 3 "C1'" 38 1 N 1 A G 4 ? OP3 ? A G 4 OP3 39 1 N 1 A G 4 ? OP1 ? A G 4 OP1 40 1 N 1 A G 4 ? OP2 ? A G 4 OP2 41 1 N 1 A G 4 ? "O5'" ? A G 4 "O5'" 42 1 N 1 A G 4 ? "C5'" ? A G 4 "C5'" 43 1 N 1 A G 4 ? "C4'" ? A G 4 "C4'" 44 1 N 1 A G 4 ? "O4'" ? A G 4 "O4'" 45 1 N 1 A G 4 ? "C3'" ? A G 4 "C3'" 46 1 N 1 A G 4 ? "O3'" ? A G 4 "O3'" 47 1 N 1 A G 4 ? "C2'" ? A G 4 "C2'" 48 1 N 1 A G 4 ? "O2'" ? A G 4 "O2'" 49 1 N 1 A G 4 ? "C1'" ? A G 4 "C1'" 50 1 N 1 A C 5 ? OP3 ? A C 5 OP3 51 1 N 1 A C 5 ? OP1 ? A C 5 OP1 52 1 N 1 A C 5 ? OP2 ? A C 5 OP2 53 1 N 1 A C 5 ? "O5'" ? A C 5 "O5'" 54 1 N 1 A C 5 ? "C5'" ? A C 5 "C5'" 55 1 N 1 A C 5 ? "C4'" ? A C 5 "C4'" 56 1 N 1 A C 5 ? "O4'" ? A C 5 "O4'" 57 1 N 1 A C 5 ? "C3'" ? A C 5 "C3'" 58 1 N 1 A C 5 ? "O3'" ? A C 5 "O3'" 59 1 N 1 A C 5 ? "C2'" ? A C 5 "C2'" 60 1 N 1 A C 5 ? "O2'" ? A C 5 "O2'" 61 1 N 1 A C 5 ? "C1'" ? A C 5 "C1'" 62 1 N 1 A T 6 ? OP3 ? A T 6 OP3 63 1 N 1 A T 6 ? OP1 ? A T 6 OP1 64 1 N 1 A T 6 ? OP2 ? A T 6 OP2 65 1 N 1 A T 6 ? "O5'" ? A T 6 "O5'" 66 1 N 1 A T 6 ? "C5'" ? A T 6 "C5'" 67 1 N 1 A T 6 ? "C4'" ? A T 6 "C4'" 68 1 N 1 A T 6 ? "O4'" ? A T 6 "O4'" 69 1 N 1 A T 6 ? "C3'" ? A T 6 "C3'" 70 1 N 1 A T 6 ? "O3'" ? A T 6 "O3'" 71 1 N 1 A T 6 ? "C2'" ? A T 6 "C2'" 72 1 N 1 A T 6 ? "C1'" ? A T 6 "C1'" 73 1 N 1 A T 6 ? C7 ? A T 6 C7 74 1 N 1 A T 7 ? OP3 ? A T 7 OP3 75 1 N 1 A T 7 ? OP1 ? A T 7 OP1 76 1 N 1 A T 7 ? OP2 ? A T 7 OP2 77 1 N 1 A T 7 ? "O5'" ? A T 7 "O5'" 78 1 N 1 A T 7 ? "C5'" ? A T 7 "C5'" 79 1 N 1 A T 7 ? "C4'" ? A T 7 "C4'" 80 1 N 1 A T 7 ? "O4'" ? A T 7 "O4'" 81 1 N 1 A T 7 ? "C3'" ? A T 7 "C3'" 82 1 N 1 A T 7 ? "O3'" ? A T 7 "O3'" 83 1 N 1 A T 7 ? "C2'" ? A T 7 "C2'" 84 1 N 1 A T 7 ? "C1'" ? A T 7 "C1'" 85 1 N 1 A T 7 ? C7 ? A T 7 C7 86 1 N 1 A C 8 ? OP3 ? A C 8 OP3 87 1 N 1 A C 8 ? OP1 ? A C 8 OP1 88 1 N 1 A C 8 ? OP2 ? A C 8 OP2 89 1 N 1 A C 8 ? "O5'" ? A C 8 "O5'" 90 1 N 1 A C 8 ? "C5'" ? A C 8 "C5'" 91 1 N 1 A C 8 ? "C4'" ? A C 8 "C4'" 92 1 N 1 A C 8 ? "O4'" ? A C 8 "O4'" 93 1 N 1 A C 8 ? "C3'" ? A C 8 "C3'" 94 1 N 1 A C 8 ? "O3'" ? A C 8 "O3'" 95 1 N 1 A C 8 ? "C2'" ? A C 8 "C2'" 96 1 N 1 A C 8 ? "O2'" ? A C 8 "O2'" 97 1 N 1 A C 8 ? "C1'" ? A C 8 "C1'" 98 1 N 1 B G 9 ? OP3 ? B G 1 OP3 99 1 N 1 B G 9 ? P ? B G 1 P 100 1 N 1 B G 9 ? OP1 ? B G 1 OP1 101 1 N 1 B G 9 ? OP2 ? B G 1 OP2 102 1 N 1 B G 9 ? "O5'" ? B G 1 "O5'" 103 1 N 1 B G 9 ? "C5'" ? B G 1 "C5'" 104 1 N 1 B G 9 ? "C4'" ? B G 1 "C4'" 105 1 N 1 B G 9 ? "O4'" ? B G 1 "O4'" 106 1 N 1 B G 9 ? "C3'" ? B G 1 "C3'" 107 1 N 1 B G 9 ? "O3'" ? B G 1 "O3'" 108 1 N 1 B G 9 ? "C2'" ? B G 1 "C2'" 109 1 N 1 B G 9 ? "O2'" ? B G 1 "O2'" 110 1 N 1 B G 9 ? "C1'" ? B G 1 "C1'" 111 1 N 1 B A 10 ? OP3 ? B A 2 OP3 112 1 N 1 B A 10 ? OP1 ? B A 2 OP1 113 1 N 1 B A 10 ? OP2 ? B A 2 OP2 114 1 N 1 B A 10 ? "O5'" ? B A 2 "O5'" 115 1 N 1 B A 10 ? "C5'" ? B A 2 "C5'" 116 1 N 1 B A 10 ? "C4'" ? B A 2 "C4'" 117 1 N 1 B A 10 ? "O4'" ? B A 2 "O4'" 118 1 N 1 B A 10 ? "C3'" ? B A 2 "C3'" 119 1 N 1 B A 10 ? "O3'" ? B A 2 "O3'" 120 1 N 1 B A 10 ? "C2'" ? B A 2 "C2'" 121 1 N 1 B A 10 ? "O2'" ? B A 2 "O2'" 122 1 N 1 B A 10 ? "C1'" ? B A 2 "C1'" 123 1 N 1 B A 11 ? OP3 ? B A 3 OP3 124 1 N 1 B A 11 ? OP1 ? B A 3 OP1 125 1 N 1 B A 11 ? OP2 ? B A 3 OP2 126 1 N 1 B A 11 ? "O5'" ? B A 3 "O5'" 127 1 N 1 B A 11 ? "C5'" ? B A 3 "C5'" 128 1 N 1 B A 11 ? "C4'" ? B A 3 "C4'" 129 1 N 1 B A 11 ? "O4'" ? B A 3 "O4'" 130 1 N 1 B A 11 ? "C3'" ? B A 3 "C3'" 131 1 N 1 B A 11 ? "O3'" ? B A 3 "O3'" 132 1 N 1 B A 11 ? "C2'" ? B A 3 "C2'" 133 1 N 1 B A 11 ? "O2'" ? B A 3 "O2'" 134 1 N 1 B A 11 ? "C1'" ? B A 3 "C1'" 135 1 N 1 B G 12 ? OP3 ? B G 4 OP3 136 1 N 1 B G 12 ? OP1 ? B G 4 OP1 137 1 N 1 B G 12 ? OP2 ? B G 4 OP2 138 1 N 1 B G 12 ? "O5'" ? B G 4 "O5'" 139 1 N 1 B G 12 ? "C5'" ? B G 4 "C5'" 140 1 N 1 B G 12 ? "C4'" ? B G 4 "C4'" 141 1 N 1 B G 12 ? "O4'" ? B G 4 "O4'" 142 1 N 1 B G 12 ? "C3'" ? B G 4 "C3'" 143 1 N 1 B G 12 ? "O3'" ? B G 4 "O3'" 144 1 N 1 B G 12 ? "C2'" ? B G 4 "C2'" 145 1 N 1 B G 12 ? "O2'" ? B G 4 "O2'" 146 1 N 1 B G 12 ? "C1'" ? B G 4 "C1'" 147 1 N 1 B C 13 ? OP3 ? B C 5 OP3 148 1 N 1 B C 13 ? OP1 ? B C 5 OP1 149 1 N 1 B C 13 ? OP2 ? B C 5 OP2 150 1 N 1 B C 13 ? "O5'" ? B C 5 "O5'" 151 1 N 1 B C 13 ? "C5'" ? B C 5 "C5'" 152 1 N 1 B C 13 ? "C4'" ? B C 5 "C4'" 153 1 N 1 B C 13 ? "O4'" ? B C 5 "O4'" 154 1 N 1 B C 13 ? "C3'" ? B C 5 "C3'" 155 1 N 1 B C 13 ? "O3'" ? B C 5 "O3'" 156 1 N 1 B C 13 ? "C2'" ? B C 5 "C2'" 157 1 N 1 B C 13 ? "O2'" ? B C 5 "O2'" 158 1 N 1 B C 13 ? "C1'" ? B C 5 "C1'" 159 1 N 1 B T 14 ? OP3 ? B T 6 OP3 160 1 N 1 B T 14 ? OP1 ? B T 6 OP1 161 1 N 1 B T 14 ? OP2 ? B T 6 OP2 162 1 N 1 B T 14 ? "O5'" ? B T 6 "O5'" 163 1 N 1 B T 14 ? "C5'" ? B T 6 "C5'" 164 1 N 1 B T 14 ? "C4'" ? B T 6 "C4'" 165 1 N 1 B T 14 ? "O4'" ? B T 6 "O4'" 166 1 N 1 B T 14 ? "C3'" ? B T 6 "C3'" 167 1 N 1 B T 14 ? "O3'" ? B T 6 "O3'" 168 1 N 1 B T 14 ? "C2'" ? B T 6 "C2'" 169 1 N 1 B T 14 ? "C1'" ? B T 6 "C1'" 170 1 N 1 B T 14 ? C7 ? B T 6 C7 171 1 N 1 B T 15 ? OP3 ? B T 7 OP3 172 1 N 1 B T 15 ? OP1 ? B T 7 OP1 173 1 N 1 B T 15 ? OP2 ? B T 7 OP2 174 1 N 1 B T 15 ? "O5'" ? B T 7 "O5'" 175 1 N 1 B T 15 ? "C5'" ? B T 7 "C5'" 176 1 N 1 B T 15 ? "C4'" ? B T 7 "C4'" 177 1 N 1 B T 15 ? "O4'" ? B T 7 "O4'" 178 1 N 1 B T 15 ? "C3'" ? B T 7 "C3'" 179 1 N 1 B T 15 ? "O3'" ? B T 7 "O3'" 180 1 N 1 B T 15 ? "C2'" ? B T 7 "C2'" 181 1 N 1 B T 15 ? "C1'" ? B T 7 "C1'" 182 1 N 1 B T 15 ? C7 ? B T 7 C7 183 1 N 1 B C 16 ? OP3 ? B C 8 OP3 184 1 N 1 B C 16 ? OP1 ? B C 8 OP1 185 1 N 1 B C 16 ? OP2 ? B C 8 OP2 186 1 N 1 B C 16 ? "O5'" ? B C 8 "O5'" 187 1 N 1 B C 16 ? "C5'" ? B C 8 "C5'" 188 1 N 1 B C 16 ? "C4'" ? B C 8 "C4'" 189 1 N 1 B C 16 ? "O4'" ? B C 8 "O4'" 190 1 N 1 B C 16 ? "C3'" ? B C 8 "C3'" 191 1 N 1 B C 16 ? "O3'" ? B C 8 "O3'" 192 1 N 1 B C 16 ? "C2'" ? B C 8 "C2'" 193 1 N 1 B C 16 ? "O2'" ? B C 8 "O2'" 194 1 N 1 B C 16 ? "C1'" ? B C 8 "C1'" 195 1 N 1 I THR 1 ? OXT ? C THR 1 OXT 196 1 N 1 I VAL 2 ? OXT ? C VAL 2 OXT 197 1 N 1 I PRO 3 ? OXT ? C PRO 3 OXT 198 1 N 1 I SAR 4 ? OXT ? C SAR 4 OXT 199 1 N 1 I VAL 5 ? OXT ? C VAL 5 OXT 200 1 N 1 J THR 1 ? OXT ? D THR 1 OXT 201 1 N 1 J VAL 2 ? OXT ? D VAL 2 OXT 202 1 N 1 J PRO 3 ? OXT ? D PRO 3 OXT 203 1 N 1 J SAR 4 ? OXT ? D SAR 4 OXT 204 1 N 1 J VAL 5 ? OXT ? D VAL 5 OXT 205 1 N 1 . PXZ 17 ? "C'" ? E PXZ 1 "C'" 206 1 N 1 . PXZ 17 ? "O'" ? E PXZ 1 "O'" # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1D55 'double helix' 1D55 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G . 1_555 B C . 1_555 -0.009 -0.149 0.354 -36.551 0.000 -9.549 1 A_G1:C16_B A 1 ? B 16 ? 19 1 1 A A . 1_555 B T . 1_555 0.043 -0.080 -0.354 -9.765 0.000 -10.928 2 A_A2:T15_B A 2 ? B 15 ? 20 1 1 A A . 1_555 B T . 1_555 -0.698 -0.299 -0.009 -12.512 0.000 2.313 3 A_A3:T14_B A 3 ? B 14 ? 20 1 1 A G . 1_555 B C . 1_555 -0.424 -0.381 0.013 -12.864 0.000 -8.959 4 A_G4:C13_B A 4 ? B 13 ? 19 1 1 A C . 1_555 B G . 1_555 0.682 -0.327 -0.303 10.980 0.000 -3.227 5 A_C5:G12_B A 5 ? B 12 ? 19 1 1 A T . 1_555 B A . 1_555 0.260 -0.105 -0.789 14.078 0.000 6.785 6 A_T6:A11_B A 6 ? B 11 ? 20 1 1 A T . 1_555 B A . 1_555 -0.007 -0.163 -0.464 -5.791 0.000 -4.494 7 A_T7:A10_B A 7 ? B 10 ? 20 1 1 A C . 1_555 B G . 1_555 0.359 -0.128 0.647 -27.257 0.000 -1.726 8 A_C8:G9_B A 8 ? B 9 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G . 1_555 B C . 1_555 A A . 1_555 B T . 1_555 -0.844 -2.198 2.936 15.349 2.422 15.308 -6.532 6.770 1.236 7.122 -45.133 21.780 1 AA_G1A2:T15C16_BB A 1 ? B 16 ? A 2 ? B 15 ? 1 A A . 1_555 B T . 1_555 A A . 1_555 B T . 1_555 0.142 2.339 2.947 -6.213 -0.559 43.286 3.189 -0.722 2.872 -0.753 8.370 43.712 2 AA_A2A3:T14T15_BB A 2 ? B 15 ? A 3 ? B 14 ? 1 A A . 1_555 B T . 1_555 A G . 1_555 B C . 1_555 -0.196 -0.860 3.136 -0.999 10.530 28.057 -3.656 0.190 2.653 20.807 1.974 29.947 3 AA_A3G4:C13T14_BB A 3 ? B 14 ? A 4 ? B 13 ? 1 A G . 1_555 B C . 1_555 A C . 1_555 B G . 1_555 0.496 0.084 6.170 6.822 10.619 6.960 -18.366 10.035 3.283 51.520 -33.100 14.406 4 AA_G4C5:G12C13_BB A 4 ? B 13 ? A 5 ? B 12 ? 1 A C . 1_555 B G . 1_555 A T . 1_555 B A . 1_555 -0.070 2.633 3.352 8.106 3.802 39.942 3.326 1.042 3.499 5.483 -11.689 40.893 5 AA_C5T6:A11G12_BB A 5 ? B 12 ? A 6 ? B 11 ? 1 A T . 1_555 B A . 1_555 A T . 1_555 B A . 1_555 -2.101 0.433 4.082 -9.081 7.872 39.943 -0.499 1.677 4.441 11.220 12.943 41.641 6 AA_T6T7:A10A11_BB A 6 ? B 11 ? A 7 ? B 10 ? 1 A T . 1_555 B A . 1_555 A C . 1_555 B G . 1_555 0.501 -1.164 4.624 -0.302 21.567 18.545 -8.664 -1.111 2.158 49.767 0.696 28.374 7 AA_T7C8:G9A10_BB A 7 ? B 10 ? A 8 ? B 9 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 1 ;DNA (5'-D(*GP*AP*AP*GP*CP*TP*TP*C)-3') ; G 2 THREONINE THR 3 2-AMINO-1,9-DICARBONYL-4,6-DIMETHYL-10-DEHYDRO-PHENOXAZIN-3-ONE PXZ 4 'METHYL GROUP' CH3 5 water HOH #