data_1D59
# 
_entry.id   1D59 
# 
_audit_conform.dict_name       mmcif_pdbx.dic 
_audit_conform.dict_version    5.385 
_audit_conform.dict_location   http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 
# 
loop_
_database_2.database_id 
_database_2.database_code 
_database_2.pdbx_database_accession 
_database_2.pdbx_DOI 
PDB   1D59         pdb_00001d59 10.2210/pdb1d59/pdb 
RCSB  UDL018       ?            ?                   
WWPDB D_1000172660 ?            ?                   
# 
loop_
_pdbx_audit_revision_history.ordinal 
_pdbx_audit_revision_history.data_content_type 
_pdbx_audit_revision_history.major_revision 
_pdbx_audit_revision_history.minor_revision 
_pdbx_audit_revision_history.revision_date 
1 'Structure model' 1 0 1993-04-15 
2 'Structure model' 1 1 2008-05-22 
3 'Structure model' 1 2 2011-07-13 
4 'Structure model' 1 3 2024-02-07 
# 
_pdbx_audit_revision_details.ordinal             1 
_pdbx_audit_revision_details.revision_ordinal    1 
_pdbx_audit_revision_details.data_content_type   'Structure model' 
_pdbx_audit_revision_details.provider            repository 
_pdbx_audit_revision_details.type                'Initial release' 
_pdbx_audit_revision_details.description         ? 
_pdbx_audit_revision_details.details             ? 
# 
loop_
_pdbx_audit_revision_group.ordinal 
_pdbx_audit_revision_group.revision_ordinal 
_pdbx_audit_revision_group.data_content_type 
_pdbx_audit_revision_group.group 
1 2 'Structure model' 'Version format compliance' 
2 3 'Structure model' 'Version format compliance' 
3 4 'Structure model' 'Data collection'           
4 4 'Structure model' 'Database references'       
# 
loop_
_pdbx_audit_revision_category.ordinal 
_pdbx_audit_revision_category.revision_ordinal 
_pdbx_audit_revision_category.data_content_type 
_pdbx_audit_revision_category.category 
1 4 'Structure model' chem_comp_atom 
2 4 'Structure model' chem_comp_bond 
3 4 'Structure model' database_2     
# 
loop_
_pdbx_audit_revision_item.ordinal 
_pdbx_audit_revision_item.revision_ordinal 
_pdbx_audit_revision_item.data_content_type 
_pdbx_audit_revision_item.item 
1 4 'Structure model' '_database_2.pdbx_DOI'                
2 4 'Structure model' '_database_2.pdbx_database_accession' 
# 
_pdbx_database_status.status_code                     REL 
_pdbx_database_status.entry_id                        1D59 
_pdbx_database_status.recvd_initial_deposition_date   1992-02-25 
_pdbx_database_status.deposit_site                    BNL 
_pdbx_database_status.process_site                    NDB 
_pdbx_database_status.SG_entry                        . 
_pdbx_database_status.pdb_format_compatible           Y 
_pdbx_database_status.status_code_mr                  ? 
_pdbx_database_status.status_code_sf                  ? 
_pdbx_database_status.status_code_cs                  ? 
_pdbx_database_status.status_code_nmr_data            ? 
_pdbx_database_status.methods_development_category    ? 
# 
loop_
_audit_author.name 
_audit_author.pdbx_ordinal 
'Kang, C.'    1 
'Zhang, X.'   2 
'Ratliff, R.' 3 
'Moyzis, R.'  4 
'Rich, A.'    5 
# 
_citation.id                        primary 
_citation.title                     'Crystal structure of four-stranded Oxytricha telomeric DNA.' 
_citation.journal_abbrev            Nature 
_citation.journal_volume            356 
_citation.page_first                126 
_citation.page_last                 131 
_citation.year                      1992 
_citation.journal_id_ASTM           NATUAS 
_citation.country                   UK 
_citation.journal_id_ISSN           0028-0836 
_citation.journal_id_CSD            0006 
_citation.book_publisher            ? 
_citation.pdbx_database_id_PubMed   1545863 
_citation.pdbx_database_id_DOI      10.1038/356126a0 
# 
loop_
_citation_author.citation_id 
_citation_author.name 
_citation_author.ordinal 
_citation_author.identifier_ORCID 
primary 'Kang, C.'    1 ? 
primary 'Zhang, X.'   2 ? 
primary 'Ratliff, R.' 3 ? 
primary 'Moyzis, R.'  4 ? 
primary 'Rich, A.'    5 ? 
# 
_entity.id                         1 
_entity.type                       polymer 
_entity.src_method                 syn 
_entity.pdbx_description           
;DNA (5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*GP*GP*G)-3')
;
_entity.formula_weight             3805.460 
_entity.pdbx_number_of_molecules   4 
_entity.pdbx_ec                    ? 
_entity.pdbx_mutation              ? 
_entity.pdbx_fragment              ? 
_entity.details                    ? 
# 
_entity_poly.entity_id                      1 
_entity_poly.type                           polydeoxyribonucleotide 
_entity_poly.nstd_linkage                   no 
_entity_poly.nstd_monomer                   no 
_entity_poly.pdbx_seq_one_letter_code       '(DG)(DG)(DG)(DG)(DT)(DT)(DT)(DT)(DG)(DG)(DG)(DG)' 
_entity_poly.pdbx_seq_one_letter_code_can   GGGGTTTTGGGG 
_entity_poly.pdbx_strand_id                 A,B,C,D 
_entity_poly.pdbx_target_identifier         ? 
# 
loop_
_entity_poly_seq.entity_id 
_entity_poly_seq.num 
_entity_poly_seq.mon_id 
_entity_poly_seq.hetero 
1 1  DG n 
1 2  DG n 
1 3  DG n 
1 4  DG n 
1 5  DT n 
1 6  DT n 
1 7  DT n 
1 8  DT n 
1 9  DG n 
1 10 DG n 
1 11 DG n 
1 12 DG n 
# 
loop_
_chem_comp.id 
_chem_comp.type 
_chem_comp.mon_nstd_flag 
_chem_comp.name 
_chem_comp.pdbx_synonyms 
_chem_comp.formula 
_chem_comp.formula_weight 
DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 
DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE"         ? 'C10 H15 N2 O8 P' 322.208 
# 
loop_
_pdbx_poly_seq_scheme.asym_id 
_pdbx_poly_seq_scheme.entity_id 
_pdbx_poly_seq_scheme.seq_id 
_pdbx_poly_seq_scheme.mon_id 
_pdbx_poly_seq_scheme.ndb_seq_num 
_pdbx_poly_seq_scheme.pdb_seq_num 
_pdbx_poly_seq_scheme.auth_seq_num 
_pdbx_poly_seq_scheme.pdb_mon_id 
_pdbx_poly_seq_scheme.auth_mon_id 
_pdbx_poly_seq_scheme.pdb_strand_id 
_pdbx_poly_seq_scheme.pdb_ins_code 
_pdbx_poly_seq_scheme.hetero 
A 1 1  DG 1  1  1  DG G A . n 
A 1 2  DG 2  2  2  DG G A . n 
A 1 3  DG 3  3  3  DG G A . n 
A 1 4  DG 4  4  4  DG G A . n 
A 1 5  DT 5  5  5  DT T A . n 
A 1 6  DT 6  6  6  DT T A . n 
A 1 7  DT 7  7  7  DT T A . n 
A 1 8  DT 8  8  8  DT T A . n 
A 1 9  DG 9  9  9  DG G A . n 
A 1 10 DG 10 10 10 DG G A . n 
A 1 11 DG 11 11 11 DG G A . n 
A 1 12 DG 12 12 12 DG G A . n 
B 1 1  DG 1  13 13 DG G B . n 
B 1 2  DG 2  14 14 DG G B . n 
B 1 3  DG 3  15 15 DG G B . n 
B 1 4  DG 4  16 16 DG G B . n 
B 1 5  DT 5  17 17 DT T B . n 
B 1 6  DT 6  18 18 DT T B . n 
B 1 7  DT 7  19 19 DT T B . n 
B 1 8  DT 8  20 20 DT T B . n 
B 1 9  DG 9  21 21 DG G B . n 
B 1 10 DG 10 22 22 DG G B . n 
B 1 11 DG 11 23 23 DG G B . n 
B 1 12 DG 12 24 24 DG G B . n 
C 1 1  DG 1  25 25 DG G C . n 
C 1 2  DG 2  26 26 DG G C . n 
C 1 3  DG 3  27 27 DG G C . n 
C 1 4  DG 4  28 28 DG G C . n 
C 1 5  DT 5  29 29 DT T C . n 
C 1 6  DT 6  30 30 DT T C . n 
C 1 7  DT 7  31 31 DT T C . n 
C 1 8  DT 8  32 32 DT T C . n 
C 1 9  DG 9  33 33 DG G C . n 
C 1 10 DG 10 34 34 DG G C . n 
C 1 11 DG 11 35 35 DG G C . n 
C 1 12 DG 12 36 36 DG G C . n 
D 1 1  DG 1  37 37 DG G D . n 
D 1 2  DG 2  38 38 DG G D . n 
D 1 3  DG 3  39 39 DG G D . n 
D 1 4  DG 4  40 40 DG G D . n 
D 1 5  DT 5  41 41 DT T D . n 
D 1 6  DT 6  42 42 DT T D . n 
D 1 7  DT 7  43 43 DT T D . n 
D 1 8  DT 8  44 44 DT T D . n 
D 1 9  DG 9  45 45 DG G D . n 
D 1 10 DG 10 46 46 DG G D . n 
D 1 11 DG 11 47 47 DG G D . n 
D 1 12 DG 12 48 48 DG G D . n 
# 
_software.name             X-PLOR 
_software.classification   refinement 
_software.version          . 
_software.citation_id      ? 
_software.pdbx_ordinal     1 
# 
_cell.entry_id           1D59 
_cell.length_a           27.730 
_cell.length_b           49.570 
_cell.length_c           97.270 
_cell.angle_alpha        90.00 
_cell.angle_beta         90.00 
_cell.angle_gamma        90.00 
_cell.Z_PDB              16 
_cell.pdbx_unique_axis   ? 
# 
_symmetry.entry_id                         1D59 
_symmetry.space_group_name_H-M             'P 21 21 21' 
_symmetry.pdbx_full_space_group_name_H-M   ? 
_symmetry.cell_setting                     ? 
_symmetry.Int_Tables_number                19 
# 
_exptl.entry_id          1D59 
_exptl.method            'X-RAY DIFFRACTION' 
_exptl.crystals_number   ? 
# 
_exptl_crystal.id                    1 
_exptl_crystal.density_meas          ? 
_exptl_crystal.density_Matthews      2.20 
_exptl_crystal.density_percent_sol   43.99 
_exptl_crystal.description           ? 
# 
_exptl_crystal_grow.crystal_id      1 
_exptl_crystal_grow.method          'VAPOR DIFFUSION, HANGING DROP' 
_exptl_crystal_grow.temp            ? 
_exptl_crystal_grow.temp_details    ? 
_exptl_crystal_grow.pH              7.00 
_exptl_crystal_grow.pdbx_details    'pH 7.00, VAPOR DIFFUSION, HANGING DROP' 
_exptl_crystal_grow.pdbx_pH_range   ? 
# 
loop_
_exptl_crystal_grow_comp.crystal_id 
_exptl_crystal_grow_comp.id 
_exptl_crystal_grow_comp.sol_id 
_exptl_crystal_grow_comp.name 
_exptl_crystal_grow_comp.volume 
_exptl_crystal_grow_comp.conc 
_exptl_crystal_grow_comp.details 
1 1 1 WATER          ? ? ? 
1 2 1 MPD            ? ? ? 
1 3 1 MGCL2          ? ? ? 
1 4 1 SPERMINE       ? ? ? 
1 5 1 'K CACODYLATE' ? ? ? 
1 6 2 WATER          ? ? ? 
1 7 2 MPD            ? ? ? 
# 
_diffrn.id                     1 
_diffrn.crystal_id             1 
_diffrn.ambient_temp           ? 
_diffrn.ambient_temp_details   ? 
# 
_diffrn_detector.diffrn_id              1 
_diffrn_detector.detector               'AREA DETECTOR' 
_diffrn_detector.type                   SDMS 
_diffrn_detector.pdbx_collection_date   ? 
_diffrn_detector.details                ? 
# 
_diffrn_radiation.diffrn_id                        1 
_diffrn_radiation.wavelength_id                    1 
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l   ? 
_diffrn_radiation.monochromator                    ? 
_diffrn_radiation.pdbx_diffrn_protocol             ? 
_diffrn_radiation.pdbx_scattering_type             x-ray 
# 
_diffrn_radiation_wavelength.id           1 
_diffrn_radiation_wavelength.wavelength   . 
_diffrn_radiation_wavelength.wt           1.0 
# 
_diffrn_source.diffrn_id                   1 
_diffrn_source.source                      ? 
_diffrn_source.type                        ? 
_diffrn_source.pdbx_synchrotron_site       ? 
_diffrn_source.pdbx_synchrotron_beamline   ? 
_diffrn_source.pdbx_wavelength             ? 
_diffrn_source.pdbx_wavelength_list        ? 
# 
_reflns.entry_id                     1D59 
_reflns.observed_criterion_sigma_I   ? 
_reflns.observed_criterion_sigma_F   2.000 
_reflns.d_resolution_low             ? 
_reflns.d_resolution_high            2.300 
_reflns.number_obs                   2471 
_reflns.number_all                   4963 
_reflns.percent_possible_obs         ? 
_reflns.pdbx_Rmerge_I_obs            ? 
_reflns.pdbx_Rsym_value              ? 
_reflns.pdbx_netI_over_sigmaI        ? 
_reflns.B_iso_Wilson_estimate        ? 
_reflns.pdbx_redundancy              ? 
_reflns.pdbx_diffrn_id               1 
_reflns.pdbx_ordinal                 1 
# 
_refine.entry_id                                 1D59 
_refine.ls_number_reflns_obs                     2471 
_refine.ls_number_reflns_all                     ? 
_refine.pdbx_ls_sigma_I                          ? 
_refine.pdbx_ls_sigma_F                          2.000 
_refine.pdbx_data_cutoff_high_absF               ? 
_refine.pdbx_data_cutoff_low_absF                ? 
_refine.pdbx_data_cutoff_high_rms_absF           ? 
_refine.ls_d_res_low                             10.000 
_refine.ls_d_res_high                            2.300 
_refine.ls_percent_reflns_obs                    ? 
_refine.ls_R_factor_obs                          0.1950000 
_refine.ls_R_factor_all                          ? 
_refine.ls_R_factor_R_work                       0.1950000 
_refine.ls_R_factor_R_free                       ? 
_refine.ls_R_factor_R_free_error                 ? 
_refine.ls_R_factor_R_free_error_details         ? 
_refine.ls_percent_reflns_R_free                 ? 
_refine.ls_number_reflns_R_free                  ? 
_refine.ls_number_parameters                     ? 
_refine.ls_number_restraints                     ? 
_refine.occupancy_min                            ? 
_refine.occupancy_max                            ? 
_refine.B_iso_mean                               ? 
_refine.aniso_B[1][1]                            ? 
_refine.aniso_B[2][2]                            ? 
_refine.aniso_B[3][3]                            ? 
_refine.aniso_B[1][2]                            ? 
_refine.aniso_B[1][3]                            ? 
_refine.aniso_B[2][3]                            ? 
_refine.solvent_model_details                    ? 
_refine.solvent_model_param_ksol                 ? 
_refine.solvent_model_param_bsol                 ? 
_refine.pdbx_ls_cross_valid_method               ? 
_refine.details                                  ? 
_refine.pdbx_starting_model                      ? 
_refine.pdbx_method_to_determine_struct          ? 
_refine.pdbx_isotropic_thermal_model             ? 
_refine.pdbx_stereochemistry_target_values       ? 
_refine.pdbx_stereochem_target_val_spec_case     ? 
_refine.pdbx_R_Free_selection_details            ? 
_refine.pdbx_overall_ESU_R                       ? 
_refine.pdbx_overall_ESU_R_Free                  ? 
_refine.overall_SU_ML                            ? 
_refine.overall_SU_B                             ? 
_refine.pdbx_refine_id                           'X-RAY DIFFRACTION' 
_refine.pdbx_diffrn_id                           1 
_refine.pdbx_TLS_residual_ADP_flag               ? 
_refine.correlation_coeff_Fo_to_Fc               ? 
_refine.correlation_coeff_Fo_to_Fc_free          ? 
_refine.pdbx_solvent_vdw_probe_radii             ? 
_refine.pdbx_solvent_ion_probe_radii             ? 
_refine.pdbx_solvent_shrinkage_radii             ? 
_refine.pdbx_overall_phase_error                 ? 
_refine.overall_SU_R_Cruickshank_DPI             ? 
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI   ? 
_refine.pdbx_overall_SU_R_Blow_DPI               ? 
_refine.pdbx_overall_SU_R_free_Blow_DPI          ? 
# 
_refine_hist.pdbx_refine_id                   'X-RAY DIFFRACTION' 
_refine_hist.cycle_id                         LAST 
_refine_hist.pdbx_number_atoms_protein        0 
_refine_hist.pdbx_number_atoms_nucleic_acid   1132 
_refine_hist.pdbx_number_atoms_ligand         0 
_refine_hist.number_atoms_solvent             0 
_refine_hist.number_atoms_total               1132 
_refine_hist.d_res_high                       2.300 
_refine_hist.d_res_low                        10.000 
# 
loop_
_refine_ls_restr.type 
_refine_ls_restr.dev_ideal 
_refine_ls_restr.dev_ideal_target 
_refine_ls_restr.weight 
_refine_ls_restr.number 
_refine_ls_restr.pdbx_refine_id 
_refine_ls_restr.pdbx_restraint_function 
x_bond_d                0.016 ? ? ? 'X-RAY DIFFRACTION' ? 
x_bond_d_na             ?     ? ? ? 'X-RAY DIFFRACTION' ? 
x_bond_d_prot           ?     ? ? ? 'X-RAY DIFFRACTION' ? 
x_angle_d               ?     ? ? ? 'X-RAY DIFFRACTION' ? 
x_angle_d_na            ?     ? ? ? 'X-RAY DIFFRACTION' ? 
x_angle_d_prot          ?     ? ? ? 'X-RAY DIFFRACTION' ? 
x_angle_deg             3.99  ? ? ? 'X-RAY DIFFRACTION' ? 
x_angle_deg_na          ?     ? ? ? 'X-RAY DIFFRACTION' ? 
x_angle_deg_prot        ?     ? ? ? 'X-RAY DIFFRACTION' ? 
x_dihedral_angle_d      ?     ? ? ? 'X-RAY DIFFRACTION' ? 
x_dihedral_angle_d_na   ?     ? ? ? 'X-RAY DIFFRACTION' ? 
x_dihedral_angle_d_prot ?     ? ? ? 'X-RAY DIFFRACTION' ? 
x_improper_angle_d      ?     ? ? ? 'X-RAY DIFFRACTION' ? 
x_improper_angle_d_na   ?     ? ? ? 'X-RAY DIFFRACTION' ? 
x_improper_angle_d_prot ?     ? ? ? 'X-RAY DIFFRACTION' ? 
x_mcbond_it             ?     ? ? ? 'X-RAY DIFFRACTION' ? 
x_mcangle_it            ?     ? ? ? 'X-RAY DIFFRACTION' ? 
x_scbond_it             ?     ? ? ? 'X-RAY DIFFRACTION' ? 
x_scangle_it            ?     ? ? ? 'X-RAY DIFFRACTION' ? 
# 
_database_PDB_matrix.entry_id          1D59 
_database_PDB_matrix.origx[1][1]       1.000000 
_database_PDB_matrix.origx[1][2]       0.000000 
_database_PDB_matrix.origx[1][3]       0.000000 
_database_PDB_matrix.origx[2][1]       0.000000 
_database_PDB_matrix.origx[2][2]       1.000000 
_database_PDB_matrix.origx[2][3]       0.000000 
_database_PDB_matrix.origx[3][1]       0.000000 
_database_PDB_matrix.origx[3][2]       0.000000 
_database_PDB_matrix.origx[3][3]       1.000000 
_database_PDB_matrix.origx_vector[1]   0.00000 
_database_PDB_matrix.origx_vector[2]   0.00000 
_database_PDB_matrix.origx_vector[3]   0.00000 
# 
_struct.entry_id                  1D59 
_struct.title                     'CRYSTAL STRUCTURE OF 4-STRANDED OXYTRICHA TELOMERIC DNA' 
_struct.pdbx_model_details        ? 
_struct.pdbx_CASP_flag            ? 
_struct.pdbx_model_type_details   ? 
# 
_struct_keywords.entry_id        1D59 
_struct_keywords.pdbx_keywords   DNA 
_struct_keywords.text            'U-DNA, QUADRUPLE HELIX, TETRAPLEX, LOOP, DNA' 
# 
loop_
_struct_asym.id 
_struct_asym.pdbx_blank_PDB_chainid_flag 
_struct_asym.pdbx_modified 
_struct_asym.entity_id 
_struct_asym.details 
A N N 1 ? 
B N N 1 ? 
C N N 1 ? 
D N N 1 ? 
# 
_struct_ref.id                         1 
_struct_ref.entity_id                  1 
_struct_ref.db_name                    PDB 
_struct_ref.db_code                    1D59 
_struct_ref.pdbx_db_accession          1D59 
_struct_ref.pdbx_db_isoform            ? 
_struct_ref.pdbx_seq_one_letter_code   ? 
_struct_ref.pdbx_align_begin           ? 
# 
loop_
_struct_ref_seq.align_id 
_struct_ref_seq.ref_id 
_struct_ref_seq.pdbx_PDB_id_code 
_struct_ref_seq.pdbx_strand_id 
_struct_ref_seq.seq_align_beg 
_struct_ref_seq.pdbx_seq_align_beg_ins_code 
_struct_ref_seq.seq_align_end 
_struct_ref_seq.pdbx_seq_align_end_ins_code 
_struct_ref_seq.pdbx_db_accession 
_struct_ref_seq.db_align_beg 
_struct_ref_seq.pdbx_db_align_beg_ins_code 
_struct_ref_seq.db_align_end 
_struct_ref_seq.pdbx_db_align_end_ins_code 
_struct_ref_seq.pdbx_auth_seq_align_beg 
_struct_ref_seq.pdbx_auth_seq_align_end 
1 1 1D59 A 1 ? 12 ? 1D59 1  ? 12 ? 1  12 
2 1 1D59 B 1 ? 12 ? 1D59 13 ? 24 ? 13 24 
3 1 1D59 C 1 ? 12 ? 1D59 25 ? 36 ? 25 36 
4 1 1D59 D 1 ? 12 ? 1D59 37 ? 48 ? 37 48 
# 
loop_
_pdbx_struct_assembly.id 
_pdbx_struct_assembly.details 
_pdbx_struct_assembly.method_details 
_pdbx_struct_assembly.oligomeric_details 
_pdbx_struct_assembly.oligomeric_count 
1 author_defined_assembly ? dimeric 2 
2 author_defined_assembly ? dimeric 2 
# 
loop_
_pdbx_struct_assembly_gen.assembly_id 
_pdbx_struct_assembly_gen.oper_expression 
_pdbx_struct_assembly_gen.asym_id_list 
1 1 A,B 
2 1 C,D 
# 
_pdbx_struct_oper_list.id                   1 
_pdbx_struct_oper_list.type                 'identity operation' 
_pdbx_struct_oper_list.name                 1_555 
_pdbx_struct_oper_list.symmetry_operation   x,y,z 
_pdbx_struct_oper_list.matrix[1][1]         1.0000000000 
_pdbx_struct_oper_list.matrix[1][2]         0.0000000000 
_pdbx_struct_oper_list.matrix[1][3]         0.0000000000 
_pdbx_struct_oper_list.vector[1]            0.0000000000 
_pdbx_struct_oper_list.matrix[2][1]         0.0000000000 
_pdbx_struct_oper_list.matrix[2][2]         1.0000000000 
_pdbx_struct_oper_list.matrix[2][3]         0.0000000000 
_pdbx_struct_oper_list.vector[2]            0.0000000000 
_pdbx_struct_oper_list.matrix[3][1]         0.0000000000 
_pdbx_struct_oper_list.matrix[3][2]         0.0000000000 
_pdbx_struct_oper_list.matrix[3][3]         1.0000000000 
_pdbx_struct_oper_list.vector[3]            0.0000000000 
# 
loop_
_struct_biol.id 
1 
2 
# 
loop_
_struct_conn.id 
_struct_conn.conn_type_id 
_struct_conn.pdbx_leaving_atom_flag 
_struct_conn.pdbx_PDB_id 
_struct_conn.ptnr1_label_asym_id 
_struct_conn.ptnr1_label_comp_id 
_struct_conn.ptnr1_label_seq_id 
_struct_conn.ptnr1_label_atom_id 
_struct_conn.pdbx_ptnr1_label_alt_id 
_struct_conn.pdbx_ptnr1_PDB_ins_code 
_struct_conn.pdbx_ptnr1_standard_comp_id 
_struct_conn.ptnr1_symmetry 
_struct_conn.ptnr2_label_asym_id 
_struct_conn.ptnr2_label_comp_id 
_struct_conn.ptnr2_label_seq_id 
_struct_conn.ptnr2_label_atom_id 
_struct_conn.pdbx_ptnr2_label_alt_id 
_struct_conn.pdbx_ptnr2_PDB_ins_code 
_struct_conn.ptnr1_auth_asym_id 
_struct_conn.ptnr1_auth_comp_id 
_struct_conn.ptnr1_auth_seq_id 
_struct_conn.ptnr2_auth_asym_id 
_struct_conn.ptnr2_auth_comp_id 
_struct_conn.ptnr2_auth_seq_id 
_struct_conn.ptnr2_symmetry 
_struct_conn.pdbx_ptnr3_label_atom_id 
_struct_conn.pdbx_ptnr3_label_seq_id 
_struct_conn.pdbx_ptnr3_label_comp_id 
_struct_conn.pdbx_ptnr3_label_asym_id 
_struct_conn.pdbx_ptnr3_label_alt_id 
_struct_conn.pdbx_ptnr3_PDB_ins_code 
_struct_conn.details 
_struct_conn.pdbx_dist_value 
_struct_conn.pdbx_value_order 
_struct_conn.pdbx_role 
hydrog1  hydrog ? ? A DG 1  N7 ? ? ? 1_555 A DG 12 N2 ? ? A DG 1  A DG 12 1_555 ? ? ? ? ? ? TYPE_6_PAIR     ? ? ? 
hydrog2  hydrog ? ? A DG 1  O6 ? ? ? 1_555 A DG 12 N1 ? ? A DG 1  A DG 12 1_555 ? ? ? ? ? ? TYPE_6_PAIR     ? ? ? 
hydrog3  hydrog ? ? A DG 1  N1 ? ? ? 1_555 B DG 4  N7 ? ? A DG 1  B DG 16 1_555 ? ? ? ? ? ? 'DG-DG MISPAIR' ? ? ? 
hydrog4  hydrog ? ? A DG 2  N1 ? ? ? 1_555 A DG 11 O6 ? ? A DG 2  A DG 11 1_555 ? ? ? ? ? ? TYPE_6_PAIR     ? ? ? 
hydrog5  hydrog ? ? A DG 2  N2 ? ? ? 1_555 A DG 11 N7 ? ? A DG 2  A DG 11 1_555 ? ? ? ? ? ? TYPE_6_PAIR     ? ? ? 
hydrog6  hydrog ? ? A DG 2  N7 ? ? ? 1_555 B DG 3  N2 ? ? A DG 2  B DG 15 1_555 ? ? ? ? ? ? TYPE_6_PAIR     ? ? ? 
hydrog7  hydrog ? ? A DG 2  O6 ? ? ? 1_555 B DG 3  N1 ? ? A DG 2  B DG 15 1_555 ? ? ? ? ? ? TYPE_6_PAIR     ? ? ? 
hydrog8  hydrog ? ? A DG 3  N7 ? ? ? 1_555 A DG 10 N2 ? ? A DG 3  A DG 10 1_555 ? ? ? ? ? ? TYPE_6_PAIR     ? ? ? 
hydrog9  hydrog ? ? A DG 3  O6 ? ? ? 1_555 A DG 10 N1 ? ? A DG 3  A DG 10 1_555 ? ? ? ? ? ? TYPE_6_PAIR     ? ? ? 
hydrog10 hydrog ? ? A DG 3  N1 ? ? ? 1_555 B DG 2  N7 ? ? A DG 3  B DG 14 1_555 ? ? ? ? ? ? 'DG-DG MISPAIR' ? ? ? 
hydrog11 hydrog ? ? A DG 4  N1 ? ? ? 1_555 A DG 9  O6 ? ? A DG 4  A DG 9  1_555 ? ? ? ? ? ? TYPE_6_PAIR     ? ? ? 
hydrog12 hydrog ? ? A DG 4  N2 ? ? ? 1_555 A DG 9  N7 ? ? A DG 4  A DG 9  1_555 ? ? ? ? ? ? TYPE_6_PAIR     ? ? ? 
hydrog13 hydrog ? ? A DG 4  O6 ? ? ? 1_555 A DG 10 N1 ? ? A DG 4  A DG 10 1_555 ? ? ? ? ? ? 'DG-DG MISPAIR' ? ? ? 
hydrog14 hydrog ? ? A DG 4  N7 ? ? ? 1_555 B DG 1  N2 ? ? A DG 4  B DG 13 1_555 ? ? ? ? ? ? TYPE_6_PAIR     ? ? ? 
hydrog15 hydrog ? ? A DG 4  O6 ? ? ? 1_555 B DG 1  N1 ? ? A DG 4  B DG 13 1_555 ? ? ? ? ? ? TYPE_6_PAIR     ? ? ? 
hydrog16 hydrog ? ? A DG 9  N1 ? ? ? 1_555 B DG 1  O6 ? ? A DG 9  B DG 13 1_555 ? ? ? ? ? ? TYPE_3_PAIR     ? ? ? 
hydrog17 hydrog ? ? A DG 9  O6 ? ? ? 1_555 B DG 1  N1 ? ? A DG 9  B DG 13 1_555 ? ? ? ? ? ? TYPE_3_PAIR     ? ? ? 
hydrog18 hydrog ? ? A DG 9  N2 ? ? ? 1_555 B DG 11 O6 ? ? A DG 9  B DG 23 1_555 ? ? ? ? ? ? 'DG-DG MISPAIR' ? ? ? 
hydrog19 hydrog ? ? A DG 9  N1 ? ? ? 1_555 B DG 12 O6 ? ? A DG 9  B DG 24 1_555 ? ? ? ? ? ? TYPE_6_PAIR     ? ? ? 
hydrog20 hydrog ? ? A DG 9  N2 ? ? ? 1_555 B DG 12 N7 ? ? A DG 9  B DG 24 1_555 ? ? ? ? ? ? TYPE_6_PAIR     ? ? ? 
hydrog21 hydrog ? ? A DG 10 N7 ? ? ? 1_555 B DG 11 N2 ? ? A DG 10 B DG 23 1_555 ? ? ? ? ? ? TYPE_6_PAIR     ? ? ? 
hydrog22 hydrog ? ? A DG 10 O6 ? ? ? 1_555 B DG 11 N1 ? ? A DG 10 B DG 23 1_555 ? ? ? ? ? ? TYPE_6_PAIR     ? ? ? 
hydrog23 hydrog ? ? A DG 11 N1 ? ? ? 1_555 B DG 10 O6 ? ? A DG 11 B DG 22 1_555 ? ? ? ? ? ? TYPE_6_PAIR     ? ? ? 
hydrog24 hydrog ? ? A DG 11 N2 ? ? ? 1_555 B DG 10 N7 ? ? A DG 11 B DG 22 1_555 ? ? ? ? ? ? TYPE_6_PAIR     ? ? ? 
hydrog25 hydrog ? ? A DG 12 N7 ? ? ? 1_555 B DG 9  N2 ? ? A DG 12 B DG 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR     ? ? ? 
hydrog26 hydrog ? ? A DG 12 O6 ? ? ? 1_555 B DG 9  N1 ? ? A DG 12 B DG 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR     ? ? ? 
hydrog27 hydrog ? ? B DG 1  N7 ? ? ? 1_555 B DG 12 N2 ? ? B DG 13 B DG 24 1_555 ? ? ? ? ? ? TYPE_6_PAIR     ? ? ? 
hydrog28 hydrog ? ? B DG 1  O6 ? ? ? 1_555 B DG 12 N1 ? ? B DG 13 B DG 24 1_555 ? ? ? ? ? ? TYPE_6_PAIR     ? ? ? 
hydrog29 hydrog ? ? B DG 2  N1 ? ? ? 1_555 B DG 11 O6 ? ? B DG 14 B DG 23 1_555 ? ? ? ? ? ? TYPE_6_PAIR     ? ? ? 
hydrog30 hydrog ? ? B DG 2  N2 ? ? ? 1_555 B DG 11 N7 ? ? B DG 14 B DG 23 1_555 ? ? ? ? ? ? TYPE_6_PAIR     ? ? ? 
hydrog31 hydrog ? ? B DG 3  N7 ? ? ? 1_555 B DG 10 N2 ? ? B DG 15 B DG 22 1_555 ? ? ? ? ? ? TYPE_6_PAIR     ? ? ? 
hydrog32 hydrog ? ? B DG 3  O6 ? ? ? 1_555 B DG 10 N1 ? ? B DG 15 B DG 22 1_555 ? ? ? ? ? ? TYPE_6_PAIR     ? ? ? 
hydrog33 hydrog ? ? B DG 4  N1 ? ? ? 1_555 B DG 9  O6 ? ? B DG 16 B DG 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR     ? ? ? 
hydrog34 hydrog ? ? B DG 4  N2 ? ? ? 1_555 B DG 9  N7 ? ? B DG 16 B DG 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR     ? ? ? 
hydrog35 hydrog ? ? C DG 1  N7 ? ? ? 1_555 C DG 12 N2 ? ? C DG 25 C DG 36 1_555 ? ? ? ? ? ? TYPE_6_PAIR     ? ? ? 
hydrog36 hydrog ? ? C DG 1  O6 ? ? ? 1_555 C DG 12 N1 ? ? C DG 25 C DG 36 1_555 ? ? ? ? ? ? TYPE_6_PAIR     ? ? ? 
hydrog37 hydrog ? ? C DG 1  N1 ? ? ? 1_555 D DG 4  O6 ? ? C DG 25 D DG 40 1_555 ? ? ? ? ? ? 'DG-DG MISPAIR' ? ? ? 
hydrog38 hydrog ? ? C DG 2  N1 ? ? ? 1_555 C DG 11 O6 ? ? C DG 26 C DG 35 1_555 ? ? ? ? ? ? TYPE_6_PAIR     ? ? ? 
hydrog39 hydrog ? ? C DG 2  N2 ? ? ? 1_555 C DG 11 N7 ? ? C DG 26 C DG 35 1_555 ? ? ? ? ? ? TYPE_6_PAIR     ? ? ? 
hydrog40 hydrog ? ? C DG 2  N7 ? ? ? 1_555 D DG 3  N2 ? ? C DG 26 D DG 39 1_555 ? ? ? ? ? ? TYPE_6_PAIR     ? ? ? 
hydrog41 hydrog ? ? C DG 2  O6 ? ? ? 1_555 D DG 3  N1 ? ? C DG 26 D DG 39 1_555 ? ? ? ? ? ? TYPE_6_PAIR     ? ? ? 
hydrog42 hydrog ? ? C DG 3  N7 ? ? ? 1_555 C DG 10 N2 ? ? C DG 27 C DG 34 1_555 ? ? ? ? ? ? TYPE_6_PAIR     ? ? ? 
hydrog43 hydrog ? ? C DG 3  O6 ? ? ? 1_555 C DG 10 N1 ? ? C DG 27 C DG 34 1_555 ? ? ? ? ? ? TYPE_6_PAIR     ? ? ? 
hydrog44 hydrog ? ? C DG 3  N1 ? ? ? 1_555 D DG 2  N7 ? ? C DG 27 D DG 38 1_555 ? ? ? ? ? ? 'DG-DG MISPAIR' ? ? ? 
hydrog45 hydrog ? ? C DG 4  N1 ? ? ? 1_555 C DG 9  O6 ? ? C DG 28 C DG 33 1_555 ? ? ? ? ? ? TYPE_6_PAIR     ? ? ? 
hydrog46 hydrog ? ? C DG 4  N2 ? ? ? 1_555 C DG 9  N7 ? ? C DG 28 C DG 33 1_555 ? ? ? ? ? ? TYPE_6_PAIR     ? ? ? 
hydrog47 hydrog ? ? C DG 4  N7 ? ? ? 1_555 D DG 1  N2 ? ? C DG 28 D DG 37 1_555 ? ? ? ? ? ? TYPE_6_PAIR     ? ? ? 
hydrog48 hydrog ? ? C DG 4  O6 ? ? ? 1_555 D DG 1  N1 ? ? C DG 28 D DG 37 1_555 ? ? ? ? ? ? TYPE_6_PAIR     ? ? ? 
hydrog49 hydrog ? ? C DG 9  N2 ? ? ? 1_555 D DG 11 O6 ? ? C DG 33 D DG 47 1_555 ? ? ? ? ? ? 'DG-DG MISPAIR' ? ? ? 
hydrog50 hydrog ? ? C DG 9  N1 ? ? ? 1_555 D DG 12 O6 ? ? C DG 33 D DG 48 1_555 ? ? ? ? ? ? TYPE_6_PAIR     ? ? ? 
hydrog51 hydrog ? ? C DG 9  N2 ? ? ? 1_555 D DG 12 N7 ? ? C DG 33 D DG 48 1_555 ? ? ? ? ? ? TYPE_6_PAIR     ? ? ? 
hydrog52 hydrog ? ? C DG 10 N7 ? ? ? 1_555 D DG 11 N2 ? ? C DG 34 D DG 47 1_555 ? ? ? ? ? ? 'DG-DG MISPAIR' ? ? ? 
hydrog53 hydrog ? ? C DG 11 N1 ? ? ? 1_555 D DG 10 O6 ? ? C DG 35 D DG 46 1_555 ? ? ? ? ? ? TYPE_6_PAIR     ? ? ? 
hydrog54 hydrog ? ? C DG 11 N2 ? ? ? 1_555 D DG 10 N7 ? ? C DG 35 D DG 46 1_555 ? ? ? ? ? ? TYPE_6_PAIR     ? ? ? 
hydrog55 hydrog ? ? C DG 12 N7 ? ? ? 1_555 D DG 9  N1 ? ? C DG 36 D DG 45 1_555 ? ? ? ? ? ? 'DG-DG MISPAIR' ? ? ? 
hydrog56 hydrog ? ? D DG 1  N7 ? ? ? 1_555 D DG 12 N1 ? ? D DG 37 D DG 48 1_555 ? ? ? ? ? ? 'DG-DG MISPAIR' ? ? ? 
hydrog57 hydrog ? ? D DG 2  N1 ? ? ? 1_555 D DG 11 O6 ? ? D DG 38 D DG 47 1_555 ? ? ? ? ? ? TYPE_6_PAIR     ? ? ? 
hydrog58 hydrog ? ? D DG 2  N2 ? ? ? 1_555 D DG 11 N7 ? ? D DG 38 D DG 47 1_555 ? ? ? ? ? ? TYPE_6_PAIR     ? ? ? 
hydrog59 hydrog ? ? D DG 3  N7 ? ? ? 1_555 D DG 10 N2 ? ? D DG 39 D DG 46 1_555 ? ? ? ? ? ? TYPE_6_PAIR     ? ? ? 
hydrog60 hydrog ? ? D DG 3  O6 ? ? ? 1_555 D DG 10 N1 ? ? D DG 39 D DG 46 1_555 ? ? ? ? ? ? TYPE_6_PAIR     ? ? ? 
hydrog61 hydrog ? ? D DG 4  N1 ? ? ? 1_555 D DG 9  O6 ? ? D DG 40 D DG 45 1_555 ? ? ? ? ? ? TYPE_6_PAIR     ? ? ? 
hydrog62 hydrog ? ? D DG 4  N2 ? ? ? 1_555 D DG 9  N7 ? ? D DG 40 D DG 45 1_555 ? ? ? ? ? ? TYPE_6_PAIR     ? ? ? 
# 
_struct_conn_type.id          hydrog 
_struct_conn_type.criteria    ? 
_struct_conn_type.reference   ? 
# 
loop_
_pdbx_validate_close_contact.id 
_pdbx_validate_close_contact.PDB_model_num 
_pdbx_validate_close_contact.auth_atom_id_1 
_pdbx_validate_close_contact.auth_asym_id_1 
_pdbx_validate_close_contact.auth_comp_id_1 
_pdbx_validate_close_contact.auth_seq_id_1 
_pdbx_validate_close_contact.PDB_ins_code_1 
_pdbx_validate_close_contact.label_alt_id_1 
_pdbx_validate_close_contact.auth_atom_id_2 
_pdbx_validate_close_contact.auth_asym_id_2 
_pdbx_validate_close_contact.auth_comp_id_2 
_pdbx_validate_close_contact.auth_seq_id_2 
_pdbx_validate_close_contact.PDB_ins_code_2 
_pdbx_validate_close_contact.label_alt_id_2 
_pdbx_validate_close_contact.dist 
1 1 N7  A DG 3  ? ? H22 A DG 10 ? ? 1.48 
2 1 N7  C DG 27 ? ? H22 C DG 34 ? ? 1.54 
3 1 N7  A DG 1  ? ? H22 A DG 12 ? ? 1.56 
4 1 H22 C DG 28 ? ? N7  C DG 33 ? ? 1.57 
# 
_pdbx_validate_symm_contact.id                1 
_pdbx_validate_symm_contact.PDB_model_num     1 
_pdbx_validate_symm_contact.auth_atom_id_1    OP2 
_pdbx_validate_symm_contact.auth_asym_id_1    A 
_pdbx_validate_symm_contact.auth_comp_id_1    DT 
_pdbx_validate_symm_contact.auth_seq_id_1     5 
_pdbx_validate_symm_contact.PDB_ins_code_1    ? 
_pdbx_validate_symm_contact.label_alt_id_1    ? 
_pdbx_validate_symm_contact.site_symmetry_1   1_555 
_pdbx_validate_symm_contact.auth_atom_id_2    OP2 
_pdbx_validate_symm_contact.auth_asym_id_2    D 
_pdbx_validate_symm_contact.auth_comp_id_2    DT 
_pdbx_validate_symm_contact.auth_seq_id_2     42 
_pdbx_validate_symm_contact.PDB_ins_code_2    ? 
_pdbx_validate_symm_contact.label_alt_id_2    ? 
_pdbx_validate_symm_contact.site_symmetry_2   3_654 
_pdbx_validate_symm_contact.dist              2.14 
# 
loop_
_pdbx_validate_rmsd_angle.id 
_pdbx_validate_rmsd_angle.PDB_model_num 
_pdbx_validate_rmsd_angle.auth_atom_id_1 
_pdbx_validate_rmsd_angle.auth_asym_id_1 
_pdbx_validate_rmsd_angle.auth_comp_id_1 
_pdbx_validate_rmsd_angle.auth_seq_id_1 
_pdbx_validate_rmsd_angle.PDB_ins_code_1 
_pdbx_validate_rmsd_angle.label_alt_id_1 
_pdbx_validate_rmsd_angle.auth_atom_id_2 
_pdbx_validate_rmsd_angle.auth_asym_id_2 
_pdbx_validate_rmsd_angle.auth_comp_id_2 
_pdbx_validate_rmsd_angle.auth_seq_id_2 
_pdbx_validate_rmsd_angle.PDB_ins_code_2 
_pdbx_validate_rmsd_angle.label_alt_id_2 
_pdbx_validate_rmsd_angle.auth_atom_id_3 
_pdbx_validate_rmsd_angle.auth_asym_id_3 
_pdbx_validate_rmsd_angle.auth_comp_id_3 
_pdbx_validate_rmsd_angle.auth_seq_id_3 
_pdbx_validate_rmsd_angle.PDB_ins_code_3 
_pdbx_validate_rmsd_angle.label_alt_id_3 
_pdbx_validate_rmsd_angle.angle_value 
_pdbx_validate_rmsd_angle.angle_target_value 
_pdbx_validate_rmsd_angle.angle_deviation 
_pdbx_validate_rmsd_angle.angle_standard_deviation 
_pdbx_validate_rmsd_angle.linker_flag 
1  1 "O4'" A DG 1  ? ? "C1'" A DG 1  ? ? N9    A DG 1  ? ? 112.52 108.30 4.22   0.30 N 
2  1 "C3'" A DG 1  ? ? "O3'" A DG 1  ? ? P     A DG 2  ? ? 129.55 119.70 9.85   1.20 Y 
3  1 "O4'" A DG 2  ? ? "C1'" A DG 2  ? ? N9    A DG 2  ? ? 112.04 108.30 3.74   0.30 N 
4  1 "C3'" A DG 2  ? ? "O3'" A DG 2  ? ? P     A DG 3  ? ? 128.30 119.70 8.60   1.20 Y 
5  1 "O4'" A DG 3  ? ? "C1'" A DG 3  ? ? N9    A DG 3  ? ? 112.70 108.30 4.40   0.30 N 
6  1 "C3'" A DG 3  ? ? "O3'" A DG 3  ? ? P     A DG 4  ? ? 129.63 119.70 9.93   1.20 Y 
7  1 "O4'" A DG 4  ? ? "C1'" A DG 4  ? ? N9    A DG 4  ? ? 111.64 108.30 3.34   0.30 N 
8  1 "O4'" A DT 5  ? ? "C1'" A DT 5  ? ? N1    A DT 5  ? ? 111.20 108.30 2.90   0.30 N 
9  1 C2    A DT 5  ? ? N3    A DT 5  ? ? C4    A DT 5  ? ? 122.76 127.20 -4.44  0.60 N 
10 1 "O4'" A DT 6  ? ? "C1'" A DT 6  ? ? N1    A DT 6  ? ? 113.41 108.30 5.11   0.30 N 
11 1 N1    A DT 6  ? ? C2    A DT 6  ? ? N3    A DT 6  ? ? 118.26 114.60 3.66   0.60 N 
12 1 C2    A DT 6  ? ? N3    A DT 6  ? ? C4    A DT 6  ? ? 122.85 127.20 -4.35  0.60 N 
13 1 "C3'" A DT 6  ? ? "O3'" A DT 6  ? ? P     A DT 7  ? ? 128.45 119.70 8.75   1.20 Y 
14 1 "C1'" A DT 7  ? ? "O4'" A DT 7  ? ? "C4'" A DT 7  ? ? 102.19 110.10 -7.91  1.00 N 
15 1 "O4'" A DT 7  ? ? "C1'" A DT 7  ? ? N1    A DT 7  ? ? 112.74 108.30 4.44   0.30 N 
16 1 C2    A DT 7  ? ? N3    A DT 7  ? ? C4    A DT 7  ? ? 121.75 127.20 -5.45  0.60 N 
17 1 C6    A DT 7  ? ? C5    A DT 7  ? ? C7    A DT 7  ? ? 119.21 122.90 -3.69  0.60 N 
18 1 "C3'" A DT 7  ? ? "O3'" A DT 7  ? ? P     A DT 8  ? ? 131.04 119.70 11.34  1.20 Y 
19 1 "O4'" A DT 8  ? ? "C1'" A DT 8  ? ? N1    A DT 8  ? ? 112.50 108.30 4.20   0.30 N 
20 1 C2    A DT 8  ? ? N3    A DT 8  ? ? C4    A DT 8  ? ? 122.71 127.20 -4.49  0.60 N 
21 1 "O4'" A DG 9  ? ? "C1'" A DG 9  ? ? N9    A DG 9  ? ? 111.55 108.30 3.25   0.30 N 
22 1 "C3'" A DG 9  ? ? "O3'" A DG 9  ? ? P     A DG 10 ? ? 127.28 119.70 7.58   1.20 Y 
23 1 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? N9    A DG 10 ? ? 115.18 108.30 6.88   0.30 N 
24 1 "O4'" A DG 12 ? ? "C1'" A DG 12 ? ? N9    A DG 12 ? ? 111.48 108.30 3.18   0.30 N 
25 1 "O4'" B DG 13 ? ? "C1'" B DG 13 ? ? "C2'" B DG 13 ? ? 100.51 105.90 -5.39  0.80 N 
26 1 "O4'" B DG 13 ? ? "C1'" B DG 13 ? ? N9    B DG 13 ? ? 115.94 108.30 7.64   0.30 N 
27 1 "O4'" B DG 14 ? ? "C1'" B DG 14 ? ? N9    B DG 14 ? ? 111.57 108.30 3.27   0.30 N 
28 1 "O4'" B DG 15 ? ? "C1'" B DG 15 ? ? N9    B DG 15 ? ? 114.52 108.30 6.22   0.30 N 
29 1 "C3'" B DG 15 ? ? "O3'" B DG 15 ? ? P     B DG 16 ? ? 127.71 119.70 8.01   1.20 Y 
30 1 "C3'" B DG 16 ? ? "O3'" B DG 16 ? ? P     B DT 17 ? ? 128.67 119.70 8.97   1.20 Y 
31 1 C2    B DT 17 ? ? N3    B DT 17 ? ? C4    B DT 17 ? ? 122.01 127.20 -5.19  0.60 N 
32 1 C6    B DT 17 ? ? C5    B DT 17 ? ? C7    B DT 17 ? ? 119.19 122.90 -3.71  0.60 N 
33 1 "O4'" B DT 18 ? ? "C1'" B DT 18 ? ? N1    B DT 18 ? ? 113.56 108.30 5.26   0.30 N 
34 1 C2    B DT 18 ? ? N3    B DT 18 ? ? C4    B DT 18 ? ? 122.59 127.20 -4.61  0.60 N 
35 1 "O4'" B DT 19 ? ? "C1'" B DT 19 ? ? N1    B DT 19 ? ? 111.24 108.30 2.94   0.30 N 
36 1 C2    B DT 19 ? ? N3    B DT 19 ? ? C4    B DT 19 ? ? 122.61 127.20 -4.59  0.60 N 
37 1 "C3'" B DT 19 ? ? "O3'" B DT 19 ? ? P     B DT 20 ? ? 130.47 119.70 10.77  1.20 Y 
38 1 C2    B DT 20 ? ? N3    B DT 20 ? ? C4    B DT 20 ? ? 122.13 127.20 -5.07  0.60 N 
39 1 "C3'" B DT 20 ? ? "O3'" B DT 20 ? ? P     B DG 21 ? ? 129.55 119.70 9.85   1.20 Y 
40 1 "O4'" B DG 21 ? ? "C1'" B DG 21 ? ? N9    B DG 21 ? ? 111.75 108.30 3.45   0.30 N 
41 1 "C3'" B DG 21 ? ? "O3'" B DG 21 ? ? P     B DG 22 ? ? 127.15 119.70 7.45   1.20 Y 
42 1 "O4'" B DG 22 ? ? "C1'" B DG 22 ? ? N9    B DG 22 ? ? 111.76 108.30 3.46   0.30 N 
43 1 "O4'" B DG 23 ? ? "C1'" B DG 23 ? ? N9    B DG 23 ? ? 112.52 108.30 4.22   0.30 N 
44 1 "O4'" B DG 24 ? ? "C1'" B DG 24 ? ? N9    B DG 24 ? ? 110.67 108.30 2.37   0.30 N 
45 1 "O4'" C DG 25 ? ? "C1'" C DG 25 ? ? N9    C DG 25 ? ? 113.89 108.30 5.59   0.30 N 
46 1 "O4'" C DG 26 ? ? "C1'" C DG 26 ? ? N9    C DG 26 ? ? 112.67 108.30 4.37   0.30 N 
47 1 "C3'" C DG 26 ? ? "O3'" C DG 26 ? ? P     C DG 27 ? ? 129.94 119.70 10.24  1.20 Y 
48 1 OP1   C DG 27 ? ? P     C DG 27 ? ? OP2   C DG 27 ? ? 109.77 119.60 -9.83  1.50 N 
49 1 "C1'" C DG 27 ? ? "O4'" C DG 27 ? ? "C4'" C DG 27 ? ? 100.05 110.10 -10.05 1.00 N 
50 1 "O4'" C DG 27 ? ? "C1'" C DG 27 ? ? N9    C DG 27 ? ? 115.96 108.30 7.66   0.30 N 
51 1 "C3'" C DG 27 ? ? "O3'" C DG 27 ? ? P     C DG 28 ? ? 129.06 119.70 9.36   1.20 Y 
52 1 "O4'" C DG 28 ? ? "C1'" C DG 28 ? ? N9    C DG 28 ? ? 110.49 108.30 2.19   0.30 N 
53 1 "O4'" C DT 29 ? ? "C4'" C DT 29 ? ? "C3'" C DT 29 ? ? 102.05 104.50 -2.45  0.40 N 
54 1 "O4'" C DT 29 ? ? "C1'" C DT 29 ? ? N1    C DT 29 ? ? 113.08 108.30 4.78   0.30 N 
55 1 C2    C DT 29 ? ? N3    C DT 29 ? ? C4    C DT 29 ? ? 122.58 127.20 -4.62  0.60 N 
56 1 "O4'" C DT 30 ? ? "C1'" C DT 30 ? ? N1    C DT 30 ? ? 112.83 108.30 4.53   0.30 N 
57 1 C2    C DT 30 ? ? N3    C DT 30 ? ? C4    C DT 30 ? ? 122.48 127.20 -4.72  0.60 N 
58 1 "O4'" C DT 31 ? ? "C1'" C DT 31 ? ? N1    C DT 31 ? ? 111.99 108.30 3.69   0.30 N 
59 1 C2    C DT 31 ? ? N3    C DT 31 ? ? C4    C DT 31 ? ? 122.25 127.20 -4.95  0.60 N 
60 1 "C3'" C DT 31 ? ? "O3'" C DT 31 ? ? P     C DT 32 ? ? 128.18 119.70 8.48   1.20 Y 
61 1 "O4'" C DT 32 ? ? "C1'" C DT 32 ? ? N1    C DT 32 ? ? 111.02 108.30 2.72   0.30 N 
62 1 C2    C DT 32 ? ? N3    C DT 32 ? ? C4    C DT 32 ? ? 122.84 127.20 -4.36  0.60 N 
63 1 "O4'" C DG 33 ? ? "C1'" C DG 33 ? ? N9    C DG 33 ? ? 114.94 108.30 6.64   0.30 N 
64 1 "O4'" C DG 34 ? ? "C1'" C DG 34 ? ? N9    C DG 34 ? ? 112.87 108.30 4.57   0.30 N 
65 1 "C3'" C DG 34 ? ? "O3'" C DG 34 ? ? P     C DG 35 ? ? 128.99 119.70 9.29   1.20 Y 
66 1 "C1'" D DG 37 ? ? "O4'" D DG 37 ? ? "C4'" D DG 37 ? ? 103.93 110.10 -6.17  1.00 N 
67 1 "O4'" D DG 37 ? ? "C1'" D DG 37 ? ? N9    D DG 37 ? ? 116.02 108.30 7.72   0.30 N 
68 1 "O4'" D DG 39 ? ? "C1'" D DG 39 ? ? N9    D DG 39 ? ? 112.11 108.30 3.81   0.30 N 
69 1 C2    D DT 41 ? ? N3    D DT 41 ? ? C4    D DT 41 ? ? 122.49 127.20 -4.71  0.60 N 
70 1 "O4'" D DT 42 ? ? "C1'" D DT 42 ? ? N1    D DT 42 ? ? 113.22 108.30 4.92   0.30 N 
71 1 C2    D DT 42 ? ? N3    D DT 42 ? ? C4    D DT 42 ? ? 122.75 127.20 -4.45  0.60 N 
72 1 "O4'" D DT 43 ? ? "C1'" D DT 43 ? ? N1    D DT 43 ? ? 113.06 108.30 4.76   0.30 N 
73 1 C2    D DT 43 ? ? N3    D DT 43 ? ? C4    D DT 43 ? ? 122.46 127.20 -4.74  0.60 N 
74 1 "C3'" D DT 43 ? ? "O3'" D DT 43 ? ? P     D DT 44 ? ? 130.46 119.70 10.76  1.20 Y 
75 1 C2    D DT 44 ? ? N3    D DT 44 ? ? C4    D DT 44 ? ? 123.13 127.20 -4.07  0.60 N 
76 1 "C3'" D DT 44 ? ? "O3'" D DT 44 ? ? P     D DG 45 ? ? 129.71 119.70 10.01  1.20 Y 
77 1 "O4'" D DG 45 ? ? "C1'" D DG 45 ? ? N9    D DG 45 ? ? 113.81 108.30 5.51   0.30 N 
78 1 "C3'" D DG 45 ? ? "O3'" D DG 45 ? ? P     D DG 46 ? ? 128.98 119.70 9.28   1.20 Y 
79 1 "O4'" D DG 46 ? ? "C1'" D DG 46 ? ? N9    D DG 46 ? ? 112.43 108.30 4.13   0.30 N 
80 1 "C3'" D DG 46 ? ? "O3'" D DG 46 ? ? P     D DG 47 ? ? 131.37 119.70 11.67  1.20 Y 
81 1 "O4'" D DG 47 ? ? "C1'" D DG 47 ? ? N9    D DG 47 ? ? 112.30 108.30 4.00   0.30 N 
82 1 "O4'" D DG 48 ? ? "C1'" D DG 48 ? ? N9    D DG 48 ? ? 111.88 108.30 3.58   0.30 N 
83 1 C5    D DG 48 ? ? C6    D DG 48 ? ? N1    D DG 48 ? ? 114.63 111.50 3.13   0.50 N 
# 
loop_
_pdbx_validate_planes.id 
_pdbx_validate_planes.PDB_model_num 
_pdbx_validate_planes.auth_comp_id 
_pdbx_validate_planes.auth_asym_id 
_pdbx_validate_planes.auth_seq_id 
_pdbx_validate_planes.PDB_ins_code 
_pdbx_validate_planes.label_alt_id 
_pdbx_validate_planes.rmsd 
_pdbx_validate_planes.type 
1  1 DG A 1  ? ? 0.066 'SIDE CHAIN' 
2  1 DG A 3  ? ? 0.072 'SIDE CHAIN' 
3  1 DT A 5  ? ? 0.084 'SIDE CHAIN' 
4  1 DT A 7  ? ? 0.245 'SIDE CHAIN' 
5  1 DT A 8  ? ? 0.107 'SIDE CHAIN' 
6  1 DG A 9  ? ? 0.049 'SIDE CHAIN' 
7  1 DG A 10 ? ? 0.111 'SIDE CHAIN' 
8  1 DG B 16 ? ? 0.050 'SIDE CHAIN' 
9  1 DT B 17 ? ? 0.265 'SIDE CHAIN' 
10 1 DT B 18 ? ? 0.070 'SIDE CHAIN' 
11 1 DT B 19 ? ? 0.127 'SIDE CHAIN' 
12 1 DT B 20 ? ? 0.165 'SIDE CHAIN' 
13 1 DG B 21 ? ? 0.064 'SIDE CHAIN' 
14 1 DG B 24 ? ? 0.075 'SIDE CHAIN' 
15 1 DG C 25 ? ? 0.092 'SIDE CHAIN' 
16 1 DT C 30 ? ? 0.065 'SIDE CHAIN' 
17 1 DT C 31 ? ? 0.183 'SIDE CHAIN' 
18 1 DG C 33 ? ? 0.052 'SIDE CHAIN' 
19 1 DG C 34 ? ? 0.058 'SIDE CHAIN' 
20 1 DG D 38 ? ? 0.094 'SIDE CHAIN' 
21 1 DT D 41 ? ? 0.125 'SIDE CHAIN' 
22 1 DT D 42 ? ? 0.130 'SIDE CHAIN' 
23 1 DT D 44 ? ? 0.153 'SIDE CHAIN' 
# 
_refine_B_iso.class            'ALL ATOMS' 
_refine_B_iso.details          TR 
_refine_B_iso.treatment        isotropic 
_refine_B_iso.pdbx_refine_id   'X-RAY DIFFRACTION' 
# 
_refine_occupancy.class            'ALL ATOMS' 
_refine_occupancy.treatment        fix 
_refine_occupancy.pdbx_refine_id   'X-RAY DIFFRACTION' 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_ordinal 
DG OP3    O N N 1  
DG P      P N N 2  
DG OP1    O N N 3  
DG OP2    O N N 4  
DG "O5'"  O N N 5  
DG "C5'"  C N N 6  
DG "C4'"  C N R 7  
DG "O4'"  O N N 8  
DG "C3'"  C N S 9  
DG "O3'"  O N N 10 
DG "C2'"  C N N 11 
DG "C1'"  C N R 12 
DG N9     N Y N 13 
DG C8     C Y N 14 
DG N7     N Y N 15 
DG C5     C Y N 16 
DG C6     C N N 17 
DG O6     O N N 18 
DG N1     N N N 19 
DG C2     C N N 20 
DG N2     N N N 21 
DG N3     N N N 22 
DG C4     C Y N 23 
DG HOP3   H N N 24 
DG HOP2   H N N 25 
DG "H5'"  H N N 26 
DG "H5''" H N N 27 
DG "H4'"  H N N 28 
DG "H3'"  H N N 29 
DG "HO3'" H N N 30 
DG "H2'"  H N N 31 
DG "H2''" H N N 32 
DG "H1'"  H N N 33 
DG H8     H N N 34 
DG H1     H N N 35 
DG H21    H N N 36 
DG H22    H N N 37 
DT OP3    O N N 38 
DT P      P N N 39 
DT OP1    O N N 40 
DT OP2    O N N 41 
DT "O5'"  O N N 42 
DT "C5'"  C N N 43 
DT "C4'"  C N R 44 
DT "O4'"  O N N 45 
DT "C3'"  C N S 46 
DT "O3'"  O N N 47 
DT "C2'"  C N N 48 
DT "C1'"  C N R 49 
DT N1     N N N 50 
DT C2     C N N 51 
DT O2     O N N 52 
DT N3     N N N 53 
DT C4     C N N 54 
DT O4     O N N 55 
DT C5     C N N 56 
DT C7     C N N 57 
DT C6     C N N 58 
DT HOP3   H N N 59 
DT HOP2   H N N 60 
DT "H5'"  H N N 61 
DT "H5''" H N N 62 
DT "H4'"  H N N 63 
DT "H3'"  H N N 64 
DT "HO3'" H N N 65 
DT "H2'"  H N N 66 
DT "H2''" H N N 67 
DT "H1'"  H N N 68 
DT H3     H N N 69 
DT H71    H N N 70 
DT H72    H N N 71 
DT H73    H N N 72 
DT H6     H N N 73 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
DG OP3   P      sing N N 1  
DG OP3   HOP3   sing N N 2  
DG P     OP1    doub N N 3  
DG P     OP2    sing N N 4  
DG P     "O5'"  sing N N 5  
DG OP2   HOP2   sing N N 6  
DG "O5'" "C5'"  sing N N 7  
DG "C5'" "C4'"  sing N N 8  
DG "C5'" "H5'"  sing N N 9  
DG "C5'" "H5''" sing N N 10 
DG "C4'" "O4'"  sing N N 11 
DG "C4'" "C3'"  sing N N 12 
DG "C4'" "H4'"  sing N N 13 
DG "O4'" "C1'"  sing N N 14 
DG "C3'" "O3'"  sing N N 15 
DG "C3'" "C2'"  sing N N 16 
DG "C3'" "H3'"  sing N N 17 
DG "O3'" "HO3'" sing N N 18 
DG "C2'" "C1'"  sing N N 19 
DG "C2'" "H2'"  sing N N 20 
DG "C2'" "H2''" sing N N 21 
DG "C1'" N9     sing N N 22 
DG "C1'" "H1'"  sing N N 23 
DG N9    C8     sing Y N 24 
DG N9    C4     sing Y N 25 
DG C8    N7     doub Y N 26 
DG C8    H8     sing N N 27 
DG N7    C5     sing Y N 28 
DG C5    C6     sing N N 29 
DG C5    C4     doub Y N 30 
DG C6    O6     doub N N 31 
DG C6    N1     sing N N 32 
DG N1    C2     sing N N 33 
DG N1    H1     sing N N 34 
DG C2    N2     sing N N 35 
DG C2    N3     doub N N 36 
DG N2    H21    sing N N 37 
DG N2    H22    sing N N 38 
DG N3    C4     sing N N 39 
DT OP3   P      sing N N 40 
DT OP3   HOP3   sing N N 41 
DT P     OP1    doub N N 42 
DT P     OP2    sing N N 43 
DT P     "O5'"  sing N N 44 
DT OP2   HOP2   sing N N 45 
DT "O5'" "C5'"  sing N N 46 
DT "C5'" "C4'"  sing N N 47 
DT "C5'" "H5'"  sing N N 48 
DT "C5'" "H5''" sing N N 49 
DT "C4'" "O4'"  sing N N 50 
DT "C4'" "C3'"  sing N N 51 
DT "C4'" "H4'"  sing N N 52 
DT "O4'" "C1'"  sing N N 53 
DT "C3'" "O3'"  sing N N 54 
DT "C3'" "C2'"  sing N N 55 
DT "C3'" "H3'"  sing N N 56 
DT "O3'" "HO3'" sing N N 57 
DT "C2'" "C1'"  sing N N 58 
DT "C2'" "H2'"  sing N N 59 
DT "C2'" "H2''" sing N N 60 
DT "C1'" N1     sing N N 61 
DT "C1'" "H1'"  sing N N 62 
DT N1    C2     sing N N 63 
DT N1    C6     sing N N 64 
DT C2    O2     doub N N 65 
DT C2    N3     sing N N 66 
DT N3    C4     sing N N 67 
DT N3    H3     sing N N 68 
DT C4    O4     doub N N 69 
DT C4    C5     sing N N 70 
DT C5    C7     sing N N 71 
DT C5    C6     doub N N 72 
DT C7    H71    sing N N 73 
DT C7    H72    sing N N 74 
DT C7    H73    sing N N 75 
DT C6    H6     sing N N 76 
# 
_ndb_struct_conf_na.entry_id   1D59 
_ndb_struct_conf_na.feature    'quadruple helix' 
# 
_atom_sites.entry_id                    1D59 
_atom_sites.fract_transf_matrix[1][1]   0.036062 
_atom_sites.fract_transf_matrix[1][2]   0.000000 
_atom_sites.fract_transf_matrix[1][3]   0.000000 
_atom_sites.fract_transf_matrix[2][1]   0.000000 
_atom_sites.fract_transf_matrix[2][2]   0.020173 
_atom_sites.fract_transf_matrix[2][3]   0.000000 
_atom_sites.fract_transf_matrix[3][1]   0.000000 
_atom_sites.fract_transf_matrix[3][2]   0.000000 
_atom_sites.fract_transf_matrix[3][3]   0.010281 
_atom_sites.fract_transf_vector[1]      0.00000 
_atom_sites.fract_transf_vector[2]      0.00000 
_atom_sites.fract_transf_vector[3]      0.00000 
# 
loop_
_atom_type.symbol 
C 
H 
N 
O 
P 
# 
loop_