HEADER GENE REGULATION 12-OCT-99 1D5V TITLE SOLUTION STRUCTURE OF THE FORKHEAD DOMAIN OF THE ADIPOCYTE- TITLE 2 TRANSCRIPTION FACTOR FREAC-11 (S12) COMPND MOL_ID: 1; COMPND 2 MOLECULE: S12 TRANSCRIPTION FACTOR (FKH-14); COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: DNA-BINDING DOMAIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 TISSUE: ADIPOSE TISSUE; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET-11A KEYWDS WINGED HELIX, DNA-RECOGNITION HELIX, GENE REGULATION EXPDTA SOLUTION NMR NUMMDL 25 AUTHOR M.J.P.VAN DONGEN,A.CEDERBERG,P.CARLSSON,S.ENERBACK,M.WIKSTROM REVDAT 4 16-FEB-22 1D5V 1 REMARK SEQADV REVDAT 3 24-FEB-09 1D5V 1 VERSN REVDAT 2 01-APR-03 1D5V 1 JRNL REVDAT 1 11-OCT-00 1D5V 0 JRNL AUTH M.J.VAN DONGEN,A.CEDERBERG,P.CARLSSON,S.ENERBACK,M.WIKSTROM JRNL TITL SOLUTION STRUCTURE AND DYNAMICS OF THE DNA-BINDING DOMAIN OF JRNL TITL 2 THE ADIPOCYTE-TRANSCRIPTION FACTOR FREAC-11. JRNL REF J.MOL.BIOL. V. 296 351 2000 JRNL REFN ISSN 0022-2836 JRNL PMID 10669593 JRNL DOI 10.1006/JMBI.1999.3476 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NMRPIPE 1, ANSIG 3.3 REMARK 3 AUTHORS : DELAGLIO (NMRPIPE), KRAULIS (ANSIG) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE STRUCTURE WAS DETERMINED FROM 1042 REMARK 3 DISTANCE RESTRAINTS, COMPLEMENTED WITH 145 RESTRAINTS ON REMARK 3 DIHEDRAL ANGLES AND 36 RESTRAINTS ON HYDROGEN BOND LENGTHS. REMARK 4 REMARK 4 1D5V COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-OCT-99. REMARK 100 THE DEPOSITION ID IS D_1000009821. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 300 REMARK 210 PH : 6.1 REMARK 210 IONIC STRENGTH : 15 MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1 MM S12 DBD, 10 MM NACL, 5 MM REMARK 210 MGCL2, 0.02% NAN3, 5 MM DTT; 1 REMARK 210 MM S12 DBD, 10 MM NACL, 5 MM REMARK 210 MGCL2, 0.02% NAN3, 5 MM DTT REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 3D_13C REMARK 210 -SEPARATED_NOESY; HNHA; CROSS REMARK 210 RELAXATION BETWEEN 13CA-1HA REMARK 210 DIPOLAR AND 13C' CHEMICAL SHIFT REMARK 210 ANISOTROPY; CROSS RELAXATION REMARK 210 BETWEEN 13CA-1HA AND 15N-1HN REMARK 210 DIPOLAR INTERACTIONS REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ; 600 MHZ; 500 MHZ REMARK 210 SPECTROMETER MODEL : UNITYPLUS REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : X-PLOR 3.1 REMARK 210 METHOD USED : COMBINED DISTANCE REMARK 210 GEOMETRY/SIMULATING ANNEALING REMARK 210 PROCEDURE REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 125 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 25 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 8 REMARK 210 REMARK 210 REMARK: HNCA, HN(CO)CA, HNCACB, CACB(CO)NH AND HNCO EXPERIMENTS REMARK 210 WERE USED TO OBTAIN SEQUENTIAL ASSIGNMENTS FOR THE BACKBONE. REMARK 210 SIDE-CHAIN RESONANCES WERE ASSIGNED USING TOCSY-15N-HSQC, C(CO) REMARK 210 NH, H(CCO)NH AND HC(C)H-TOCSY EXPERIMENTS. REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 PRO A 6 -8.03 -48.41 REMARK 500 1 LEU A 56 59.00 -69.59 REMARK 500 1 SER A 57 -55.64 -172.55 REMARK 500 1 ARG A 67 -168.58 -72.23 REMARK 500 1 PRO A 72 -157.78 -82.18 REMARK 500 1 SER A 84 49.03 -83.54 REMARK 500 1 MET A 87 6.15 -69.05 REMARK 500 2 PRO A 5 155.57 -42.66 REMARK 500 2 PRO A 82 -137.16 -50.86 REMARK 500 3 PRO A 5 160.57 -45.58 REMARK 500 3 PRO A 39 -7.25 -49.75 REMARK 500 3 GLN A 46 -168.89 -59.91 REMARK 500 3 LYS A 74 -105.99 -82.94 REMARK 500 3 PRO A 82 -141.86 -55.12 REMARK 500 3 ASP A 83 45.38 -81.96 REMARK 500 3 PHE A 93 -13.76 -46.46 REMARK 500 4 PRO A 6 28.79 -73.27 REMARK 500 4 ARG A 67 -161.38 -79.07 REMARK 500 5 PRO A 6 -12.11 -42.25 REMARK 500 5 PRO A 39 -6.07 -50.31 REMARK 500 5 LEU A 56 59.21 -65.29 REMARK 500 5 SER A 57 -54.87 -159.97 REMARK 500 5 PRO A 66 -168.84 -71.12 REMARK 500 5 PRO A 82 -79.72 -53.25 REMARK 500 5 ASP A 83 42.62 -162.08 REMARK 500 5 SER A 84 110.00 -45.37 REMARK 500 5 TYR A 85 -76.67 -89.95 REMARK 500 5 ASN A 90 44.68 -80.96 REMARK 500 6 PRO A 6 27.66 -74.67 REMARK 500 6 PRO A 82 -135.99 -49.69 REMARK 500 6 SER A 84 44.30 -179.97 REMARK 500 6 PHE A 88 35.87 -89.49 REMARK 500 6 ASN A 90 1.50 -65.96 REMARK 500 6 SER A 92 120.36 -173.47 REMARK 500 7 PRO A 5 154.26 -40.93 REMARK 500 7 PRO A 6 30.22 -75.72 REMARK 500 7 PRO A 21 -73.94 -37.33 REMARK 500 7 GLU A 22 -79.97 -90.10 REMARK 500 7 LYS A 23 -34.65 -165.50 REMARK 500 7 LYS A 45 -66.39 -95.55 REMARK 500 7 PRO A 66 162.67 -35.52 REMARK 500 7 ARG A 67 -172.36 -59.79 REMARK 500 7 PRO A 72 -131.68 -47.89 REMARK 500 8 PRO A 6 26.61 -73.40 REMARK 500 8 PRO A 82 -153.69 -74.55 REMARK 500 8 SER A 84 85.83 -59.30 REMARK 500 8 PHE A 88 -107.82 -59.15 REMARK 500 8 ASN A 90 31.35 -90.89 REMARK 500 9 PRO A 6 -12.17 -42.03 REMARK 500 9 LYS A 70 -15.21 -49.82 REMARK 500 REMARK 500 THIS ENTRY HAS 155 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL DBREF 1D5V A 1 94 UNP Q99958 FOXC2_HUMAN 69 162 SEQADV 1D5V MET A 1 UNP Q99958 ASP 69 CONFLICT SEQRES 1 A 94 MET LEU VAL LYS PRO PRO TYR SER TYR ILE ALA LEU ILE SEQRES 2 A 94 THR MET ALA ILE GLN ASN ALA PRO GLU LYS LYS ILE THR SEQRES 3 A 94 LEU ASN GLY ILE TYR GLN PHE ILE MET ASP ARG PHE PRO SEQRES 4 A 94 PHE TYR ARG GLU ASN LYS GLN GLY TRP GLN ASN SER ILE SEQRES 5 A 94 ARG HIS ASN LEU SER LEU ASN GLU CYS PHE VAL LYS VAL SEQRES 6 A 94 PRO ARG ASP ASP LYS LYS PRO GLY LYS GLY SER TYR TRP SEQRES 7 A 94 THR LEU ASP PRO ASP SER TYR ASN MET PHE GLU ASN GLY SEQRES 8 A 94 SER PHE LEU HELIX 1 1 SER A 8 ASN A 19 1 12 HELIX 2 2 THR A 26 PHE A 38 1 13 HELIX 3 3 PRO A 39 ASN A 44 1 6 HELIX 4 4 GLY A 47 ASN A 59 1 13 SHEET 1 A 2 PHE A 62 LYS A 64 0 SHEET 2 A 2 TRP A 78 LEU A 80 -1 O THR A 79 N VAL A 63 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1