data_1D60 # _entry.id 1D60 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.385 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1D60 pdb_00001d60 10.2210/pdb1d60/pdb RCSB BDJB43 ? ? WWPDB D_1000172661 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1993-04-15 2 'Structure model' 1 1 2008-05-22 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-02-07 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_struct_conn_angle 5 4 'Structure model' struct_conn 6 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.value' 6 4 'Structure model' '_struct_conn.pdbx_dist_value' 7 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 8 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 9 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 10 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1D60 _pdbx_database_status.recvd_initial_deposition_date 1992-02-26 _pdbx_database_status.deposit_site BNL _pdbx_database_status.process_site NDB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Lipanov, A.' 1 'Kopka, M.L.' 2 'Kaczor-Grzeskowiak, M.' 3 'Quintana, J.' 4 'Dickerson, R.E.' 5 # _citation.id primary _citation.title 'Structure of the B-DNA decamer C-C-A-A-C-I-T-T-G-G in two different space groups: conformational flexibility of B-DNA.' _citation.journal_abbrev Biochemistry _citation.journal_volume 32 _citation.page_first 1373 _citation.page_last 1389 _citation.year 1993 _citation.journal_id_ASTM BICHAW _citation.country US _citation.journal_id_ISSN 0006-2960 _citation.journal_id_CSD 0033 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 8448146 _citation.pdbx_database_id_DOI 10.1021/bi00056a024 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Lipanov, A.' 1 ? primary 'Kopka, M.L.' 2 ? primary 'Kaczor-Grzeskowiak, M.' 3 ? primary 'Quintana, J.' 4 ? primary 'Dickerson, R.E.' 5 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*CP*CP*AP*AP*CP*IP*TP*TP*GP*G)-3') ; 3029.990 2 ? ? ? ? 2 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 3 water nat water 18.015 42 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code '(DC)(DC)(DA)(DA)(DC)(DI)(DT)(DT)(DG)(DG)' _entity_poly.pdbx_seq_one_letter_code_can CCAACITTGG _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MAGNESIUM ION' MG 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DC n 1 3 DA n 1 4 DA n 1 5 DC n 1 6 DI n 1 7 DT n 1 8 DT n 1 9 DG n 1 10 DG n # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DI 'DNA linking' y "2'-DEOXYINOSINE-5'-MONOPHOSPHATE" ? 'C10 H13 N4 O7 P' 332.207 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 HOH non-polymer . WATER ? 'H2 O' 18.015 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 1 1 DC C A . n A 1 2 DC 2 2 2 DC C A . n A 1 3 DA 3 3 3 DA A A . n A 1 4 DA 4 4 4 DA A A . n A 1 5 DC 5 5 5 DC C A . n A 1 6 DI 6 6 6 DI I A . n A 1 7 DT 7 7 7 DT T A . n A 1 8 DT 8 8 8 DT T A . n A 1 9 DG 9 9 9 DG G A . n A 1 10 DG 10 10 10 DG G A . n B 1 1 DC 1 11 11 DC C B . n B 1 2 DC 2 12 12 DC C B . n B 1 3 DA 3 13 13 DA A B . n B 1 4 DA 4 14 14 DA A B . n B 1 5 DC 5 15 15 DC C B . n B 1 6 DI 6 16 16 DI I B . n B 1 7 DT 7 17 17 DT T B . n B 1 8 DT 8 18 18 DT T B . n B 1 9 DG 9 19 19 DG G B . n B 1 10 DG 10 20 20 DG G B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG 1 21 21 MG MO6 B . D 3 HOH 1 22 22 HOH HOH A . D 3 HOH 2 23 23 HOH HOH A . D 3 HOH 3 24 24 HOH HOH A . D 3 HOH 4 25 25 HOH HOH A . D 3 HOH 5 26 26 HOH HOH A . D 3 HOH 6 28 28 HOH HOH A . D 3 HOH 7 31 31 HOH HOH A . D 3 HOH 8 36 36 HOH HOH A . D 3 HOH 9 37 37 HOH HOH A . D 3 HOH 10 38 38 HOH HOH A . D 3 HOH 11 39 39 HOH HOH A . D 3 HOH 12 40 40 HOH HOH A . D 3 HOH 13 47 47 HOH HOH A . D 3 HOH 14 49 49 HOH HOH A . D 3 HOH 15 50 50 HOH HOH A . D 3 HOH 16 51 51 HOH HOH A . D 3 HOH 17 56 56 HOH HOH A . D 3 HOH 18 57 57 HOH HOH A . E 3 HOH 1 27 27 HOH HOH B . E 3 HOH 2 29 29 HOH HOH B . E 3 HOH 3 30 30 HOH HOH B . E 3 HOH 4 32 32 HOH HOH B . E 3 HOH 5 33 33 HOH HOH B . E 3 HOH 6 34 34 HOH HOH B . E 3 HOH 7 35 35 HOH HOH B . E 3 HOH 8 41 41 HOH HOH B . E 3 HOH 9 42 42 HOH HOH B . E 3 HOH 10 43 43 HOH HOH B . E 3 HOH 11 44 44 HOH HOH B . E 3 HOH 12 45 45 HOH HOH B . E 3 HOH 13 46 46 HOH HOH B . E 3 HOH 14 48 48 HOH HOH B . E 3 HOH 15 52 52 HOH HOH B . E 3 HOH 16 53 53 HOH HOH B . E 3 HOH 17 54 54 HOH HOH B . E 3 HOH 18 55 55 HOH HOH B . E 3 HOH 19 58 21 HOH MO6 B . E 3 HOH 20 59 21 HOH MO6 B . E 3 HOH 21 60 21 HOH MO6 B . E 3 HOH 22 61 21 HOH MO6 B . E 3 HOH 23 62 21 HOH MO6 B . E 3 HOH 24 63 21 HOH MO6 B . # _software.name NUCLSQ _software.classification refinement _software.version . _software.citation_id ? _software.pdbx_ordinal 1 # _cell.entry_id 1D60 _cell.length_a 33.230 _cell.length_b 33.230 _cell.length_c 94.770 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1D60 _symmetry.space_group_name_H-M 'P 32 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 # _exptl.entry_id 1D60 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.49 _exptl_crystal.density_percent_sol 50.65 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 277.00 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.00 _exptl_crystal_grow.pdbx_details 'pH 7.00, VAPOR DIFFUSION, SITTING DROP, temperature 277.00K' _exptl_crystal_grow.pdbx_pH_range ? # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 WATER ? ? ? 1 2 1 MPD ? ? ? 1 3 1 'MG ACETATE' ? ? ? 1 4 1 'NA CACODYLATE' ? ? ? 1 5 1 SPERMINE ? ? ? 1 6 2 WATER ? ? ? 1 7 2 MPD ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 248.00 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector DIFFRACTOMETER _diffrn_detector.type 'RIGAKU AFC-5R' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type ? _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1D60 _reflns.observed_criterion_sigma_I 2.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 8.000 _reflns.d_resolution_high 2.200 _reflns.number_obs 1725 _reflns.number_all 3202 _reflns.percent_possible_obs ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _refine.entry_id 1D60 _refine.ls_number_reflns_obs 1725 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 8.000 _refine.ls_d_res_high 2.200 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.1620000 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 402 _refine_hist.pdbx_number_atoms_ligand 7 _refine_hist.number_atoms_solvent 36 _refine_hist.number_atoms_total 445 _refine_hist.d_res_high 2.200 _refine_hist.d_res_low 8.000 # _database_PDB_matrix.entry_id 1D60 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1D60 _struct.title 'THE STRUCTURE OF THE B-DNA DECAMER C-C-A-A-C-I-T-T-G-G: TRIGONAL FORM' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1D60 _struct_keywords.pdbx_keywords DNA _struct_keywords.text 'B-DNA, DOUBLE HELIX, MODIFIED, DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 1D60 _struct_ref.pdbx_db_accession 1D60 _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1D60 A 1 ? 10 ? 1D60 1 ? 10 ? 1 10 2 1 1D60 B 1 ? 10 ? 1D60 11 ? 20 ? 11 20 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? C MG . MG ? ? ? 1_555 E HOH . O ? ? B MG 21 B HOH 58 1_555 ? ? ? ? ? ? ? 2.063 ? ? metalc2 metalc ? ? C MG . MG ? ? ? 1_555 E HOH . O ? ? B MG 21 B HOH 59 1_555 ? ? ? ? ? ? ? 1.945 ? ? metalc3 metalc ? ? C MG . MG ? ? ? 1_555 E HOH . O ? ? B MG 21 B HOH 60 1_555 ? ? ? ? ? ? ? 1.985 ? ? metalc4 metalc ? ? C MG . MG ? ? ? 1_555 E HOH . O ? ? B MG 21 B HOH 61 1_555 ? ? ? ? ? ? ? 1.974 ? ? metalc5 metalc ? ? C MG . MG ? ? ? 1_555 E HOH . O ? ? B MG 21 B HOH 62 1_555 ? ? ? ? ? ? ? 2.037 ? ? metalc6 metalc ? ? C MG . MG ? ? ? 1_555 E HOH . O ? ? B MG 21 B HOH 63 1_555 ? ? ? ? ? ? ? 1.965 ? ? hydrog1 hydrog ? ? A DC 1 N3 ? ? ? 1_555 B DG 10 N1 ? ? A DC 1 B DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DC 1 N4 ? ? ? 1_555 B DG 10 O6 ? ? A DC 1 B DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 1 O2 ? ? ? 1_555 B DG 10 N2 ? ? A DC 1 B DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DC 2 N3 ? ? ? 1_555 B DG 9 N1 ? ? A DC 2 B DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DC 2 N4 ? ? ? 1_555 B DG 9 O6 ? ? A DC 2 B DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DC 2 O2 ? ? ? 1_555 B DG 9 N2 ? ? A DC 2 B DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DA 3 N1 ? ? ? 1_555 B DT 8 N3 ? ? A DA 3 B DT 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DA 3 N6 ? ? ? 1_555 B DT 8 O4 ? ? A DA 3 B DT 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DA 4 N1 ? ? ? 1_555 B DT 7 N3 ? ? A DA 4 B DT 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DA 4 N6 ? ? ? 1_555 B DT 7 O4 ? ? A DA 4 B DT 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DT 7 N3 ? ? ? 1_555 B DA 4 N1 ? ? A DT 7 B DA 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DT 7 O4 ? ? ? 1_555 B DA 4 N6 ? ? A DT 7 B DA 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DT 8 N3 ? ? ? 1_555 B DA 3 N1 ? ? A DT 8 B DA 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DT 8 O4 ? ? ? 1_555 B DA 3 N6 ? ? A DT 8 B DA 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DG 9 N1 ? ? ? 1_555 B DC 2 N3 ? ? A DG 9 B DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DG 9 N2 ? ? ? 1_555 B DC 2 O2 ? ? A DG 9 B DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DG 9 O6 ? ? ? 1_555 B DC 2 N4 ? ? A DG 9 B DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DG 10 N1 ? ? ? 1_555 B DC 1 N3 ? ? A DG 10 B DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DG 10 N2 ? ? ? 1_555 B DC 1 O2 ? ? A DG 10 B DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DG 10 O6 ? ? ? 1_555 B DC 1 N4 ? ? A DG 10 B DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? E HOH . ? B HOH 58 ? 1_555 MG ? C MG . ? B MG 21 ? 1_555 O ? E HOH . ? B HOH 59 ? 1_555 175.1 ? 2 O ? E HOH . ? B HOH 58 ? 1_555 MG ? C MG . ? B MG 21 ? 1_555 O ? E HOH . ? B HOH 60 ? 1_555 86.9 ? 3 O ? E HOH . ? B HOH 59 ? 1_555 MG ? C MG . ? B MG 21 ? 1_555 O ? E HOH . ? B HOH 60 ? 1_555 89.0 ? 4 O ? E HOH . ? B HOH 58 ? 1_555 MG ? C MG . ? B MG 21 ? 1_555 O ? E HOH . ? B HOH 61 ? 1_555 87.3 ? 5 O ? E HOH . ? B HOH 59 ? 1_555 MG ? C MG . ? B MG 21 ? 1_555 O ? E HOH . ? B HOH 61 ? 1_555 96.8 ? 6 O ? E HOH . ? B HOH 60 ? 1_555 MG ? C MG . ? B MG 21 ? 1_555 O ? E HOH . ? B HOH 61 ? 1_555 174.2 ? 7 O ? E HOH . ? B HOH 58 ? 1_555 MG ? C MG . ? B MG 21 ? 1_555 O ? E HOH . ? B HOH 62 ? 1_555 85.6 ? 8 O ? E HOH . ? B HOH 59 ? 1_555 MG ? C MG . ? B MG 21 ? 1_555 O ? E HOH . ? B HOH 62 ? 1_555 91.8 ? 9 O ? E HOH . ? B HOH 60 ? 1_555 MG ? C MG . ? B MG 21 ? 1_555 O ? E HOH . ? B HOH 62 ? 1_555 91.4 ? 10 O ? E HOH . ? B HOH 61 ? 1_555 MG ? C MG . ? B MG 21 ? 1_555 O ? E HOH . ? B HOH 62 ? 1_555 88.3 ? 11 O ? E HOH . ? B HOH 58 ? 1_555 MG ? C MG . ? B MG 21 ? 1_555 O ? E HOH . ? B HOH 63 ? 1_555 90.9 ? 12 O ? E HOH . ? B HOH 59 ? 1_555 MG ? C MG . ? B MG 21 ? 1_555 O ? E HOH . ? B HOH 63 ? 1_555 91.9 ? 13 O ? E HOH . ? B HOH 60 ? 1_555 MG ? C MG . ? B MG 21 ? 1_555 O ? E HOH . ? B HOH 63 ? 1_555 91.6 ? 14 O ? E HOH . ? B HOH 61 ? 1_555 MG ? C MG . ? B MG 21 ? 1_555 O ? E HOH . ? B HOH 63 ? 1_555 88.3 ? 15 O ? E HOH . ? B HOH 62 ? 1_555 MG ? C MG . ? B MG 21 ? 1_555 O ? E HOH . ? B HOH 63 ? 1_555 175.3 ? # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id B _struct_site.pdbx_auth_comp_id MG _struct_site.pdbx_auth_seq_id 21 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 6 _struct_site.details 'BINDING SITE FOR RESIDUE MG B 21' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 HOH E . ? HOH B 58 . ? 1_555 ? 2 AC1 6 HOH E . ? HOH B 59 . ? 1_555 ? 3 AC1 6 HOH E . ? HOH B 60 . ? 1_555 ? 4 AC1 6 HOH E . ? HOH B 61 . ? 1_555 ? 5 AC1 6 HOH E . ? HOH B 62 . ? 1_555 ? 6 AC1 6 HOH E . ? HOH B 63 . ? 1_555 ? # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 N3 A DC 1 ? ? C4 A DC 1 ? ? 1.380 1.335 0.045 0.007 N 2 1 "O3'" B DC 15 ? ? P B DI 16 ? ? 1.528 1.607 -0.079 0.012 Y # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A DC 1 ? ? "C4'" A DC 1 ? ? "C3'" A DC 1 ? ? 100.69 104.50 -3.81 0.40 N 2 1 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 115.98 108.30 7.68 0.30 N 3 1 "C3'" A DC 1 ? ? "O3'" A DC 1 ? ? P A DC 2 ? ? 136.79 119.70 17.09 1.20 Y 4 1 P A DC 2 ? ? "O5'" A DC 2 ? ? "C5'" A DC 2 ? ? 108.12 120.90 -12.78 1.60 N 5 1 "O4'" A DC 2 ? ? "C1'" A DC 2 ? ? N1 A DC 2 ? ? 112.99 108.30 4.69 0.30 N 6 1 "C3'" A DC 2 ? ? "O3'" A DC 2 ? ? P A DA 3 ? ? 154.77 119.70 35.07 1.20 Y 7 1 P A DA 3 ? ? "O5'" A DA 3 ? ? "C5'" A DA 3 ? ? 137.94 120.90 17.04 1.60 N 8 1 "O4'" A DA 3 ? ? "C1'" A DA 3 ? ? N9 A DA 3 ? ? 116.09 108.30 7.79 0.30 N 9 1 N1 A DA 3 ? ? C2 A DA 3 ? ? N3 A DA 3 ? ? 123.55 129.30 -5.75 0.50 N 10 1 C2 A DA 3 ? ? N3 A DA 3 ? ? C4 A DA 3 ? ? 113.72 110.60 3.12 0.50 N 11 1 N1 A DA 3 ? ? C6 A DA 3 ? ? N6 A DA 3 ? ? 115.00 118.60 -3.60 0.60 N 12 1 C5 A DA 3 ? ? C6 A DA 3 ? ? N6 A DA 3 ? ? 129.00 123.70 5.30 0.80 N 13 1 "O4'" A DA 4 ? ? "C1'" A DA 4 ? ? N9 A DA 4 ? ? 112.78 108.30 4.48 0.30 N 14 1 N1 A DA 4 ? ? C2 A DA 4 ? ? N3 A DA 4 ? ? 124.79 129.30 -4.51 0.50 N 15 1 "C3'" A DA 4 ? ? "O3'" A DA 4 ? ? P A DC 5 ? ? 132.57 119.70 12.87 1.20 Y 16 1 "C1'" A DC 5 ? ? "O4'" A DC 5 ? ? "C4'" A DC 5 ? ? 103.28 110.10 -6.82 1.00 N 17 1 N1 A DC 5 ? ? "C1'" A DC 5 ? ? "C2'" A DC 5 ? ? 125.57 114.30 11.27 1.40 N 18 1 "O3'" A DC 5 ? ? P A DI 6 ? ? OP1 A DI 6 ? ? 117.57 110.50 7.07 1.10 Y 19 1 "C3'" A DI 6 ? ? "O3'" A DI 6 ? ? P A DT 7 ? ? 138.83 119.70 19.13 1.20 Y 20 1 "O5'" A DT 7 ? ? "C5'" A DT 7 ? ? "C4'" A DT 7 ? ? 102.51 109.40 -6.89 0.80 N 21 1 N1 A DT 7 ? ? C2 A DT 7 ? ? N3 A DT 7 ? ? 119.76 114.60 5.16 0.60 N 22 1 C2 A DT 7 ? ? N3 A DT 7 ? ? C4 A DT 7 ? ? 121.02 127.20 -6.18 0.60 N 23 1 N3 A DT 7 ? ? C4 A DT 7 ? ? C5 A DT 7 ? ? 119.32 115.20 4.12 0.60 N 24 1 N3 A DT 7 ? ? C2 A DT 7 ? ? O2 A DT 7 ? ? 115.26 122.30 -7.04 0.60 N 25 1 N3 A DT 7 ? ? C4 A DT 7 ? ? O4 A DT 7 ? ? 115.40 119.90 -4.50 0.60 N 26 1 "C3'" A DT 7 ? ? "O3'" A DT 7 ? ? P A DT 8 ? ? 130.64 119.70 10.94 1.20 Y 27 1 OP1 A DT 8 ? ? P A DT 8 ? ? OP2 A DT 8 ? ? 105.91 119.60 -13.69 1.50 N 28 1 "O5'" A DT 8 ? ? P A DT 8 ? ? OP1 A DT 8 ? ? 122.69 110.70 11.99 1.20 N 29 1 "O4'" A DT 8 ? ? "C1'" A DT 8 ? ? N1 A DT 8 ? ? 111.08 108.30 2.78 0.30 N 30 1 N1 A DT 8 ? ? C2 A DT 8 ? ? N3 A DT 8 ? ? 118.75 114.60 4.15 0.60 N 31 1 C2 A DT 8 ? ? N3 A DT 8 ? ? C4 A DT 8 ? ? 120.57 127.20 -6.63 0.60 N 32 1 N3 A DT 8 ? ? C4 A DT 8 ? ? C5 A DT 8 ? ? 120.30 115.20 5.10 0.60 N 33 1 C6 A DT 8 ? ? C5 A DT 8 ? ? C7 A DT 8 ? ? 118.62 122.90 -4.28 0.60 N 34 1 "O5'" A DG 9 ? ? "C5'" A DG 9 ? ? "C4'" A DG 9 ? ? 100.61 109.40 -8.79 0.80 N 35 1 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 113.12 108.30 4.82 0.30 N 36 1 C6 A DG 9 ? ? N1 A DG 9 ? ? C2 A DG 9 ? ? 121.34 125.10 -3.76 0.60 N 37 1 C5 A DG 9 ? ? C6 A DG 9 ? ? N1 A DG 9 ? ? 115.04 111.50 3.54 0.50 N 38 1 N1 A DG 9 ? ? C6 A DG 9 ? ? O6 A DG 9 ? ? 115.47 119.90 -4.43 0.60 N 39 1 "C3'" A DG 9 ? ? "O3'" A DG 9 ? ? P A DG 10 ? ? 142.83 119.70 23.13 1.20 Y 40 1 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? "C2'" A DG 10 ? ? 99.28 105.90 -6.62 0.80 N 41 1 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? N9 A DG 10 ? ? 101.79 108.00 -6.21 0.70 N 42 1 N3 A DG 10 ? ? C2 A DG 10 ? ? N2 A DG 10 ? ? 115.07 119.90 -4.83 0.70 N 43 1 N1 A DG 10 ? ? C6 A DG 10 ? ? O6 A DG 10 ? ? 124.01 119.90 4.11 0.60 N 44 1 C5 A DG 10 ? ? C6 A DG 10 ? ? O6 A DG 10 ? ? 122.59 128.60 -6.01 0.60 N 45 1 N3 B DC 11 ? ? C4 B DC 11 ? ? C5 B DC 11 ? ? 118.81 121.90 -3.09 0.40 N 46 1 N1 B DC 11 ? ? C2 B DC 11 ? ? O2 B DC 11 ? ? 123.50 118.90 4.60 0.60 N 47 1 "C3'" B DC 11 ? ? "O3'" B DC 11 ? ? P B DC 12 ? ? 133.35 119.70 13.65 1.20 Y 48 1 "O3'" B DC 11 ? ? P B DC 12 ? ? OP2 B DC 12 ? ? 119.18 110.50 8.68 1.10 Y 49 1 "O5'" B DC 12 ? ? "C5'" B DC 12 ? ? "C4'" B DC 12 ? ? 101.42 109.40 -7.98 0.80 N 50 1 N1 B DC 12 ? ? C2 B DC 12 ? ? O2 B DC 12 ? ? 122.91 118.90 4.01 0.60 N 51 1 "O5'" B DA 13 ? ? P B DA 13 ? ? OP2 B DA 13 ? ? 119.09 110.70 8.39 1.20 N 52 1 "C5'" B DA 13 ? ? "C4'" B DA 13 ? ? "O4'" B DA 13 ? ? 116.41 109.80 6.61 1.10 N 53 1 "C1'" B DA 13 ? ? "O4'" B DA 13 ? ? "C4'" B DA 13 ? ? 114.54 110.30 4.24 0.70 N 54 1 "O4'" B DA 13 ? ? "C1'" B DA 13 ? ? N9 B DA 13 ? ? 114.70 108.30 6.40 0.30 N 55 1 N1 B DA 13 ? ? C2 B DA 13 ? ? N3 B DA 13 ? ? 125.78 129.30 -3.52 0.50 N 56 1 "C3'" B DA 13 ? ? "O3'" B DA 13 ? ? P B DA 14 ? ? 127.95 119.70 8.25 1.20 Y 57 1 "O5'" B DA 14 ? ? "C5'" B DA 14 ? ? "C4'" B DA 14 ? ? 102.32 109.40 -7.08 0.80 N 58 1 N1 B DA 14 ? ? C2 B DA 14 ? ? N3 B DA 14 ? ? 124.73 129.30 -4.57 0.50 N 59 1 C2 B DA 14 ? ? N3 B DA 14 ? ? C4 B DA 14 ? ? 113.84 110.60 3.24 0.50 N 60 1 C2 B DC 15 ? ? N3 B DC 15 ? ? C4 B DC 15 ? ? 123.35 119.90 3.45 0.50 N 61 1 N1 B DC 15 ? ? C2 B DC 15 ? ? O2 B DC 15 ? ? 122.59 118.90 3.69 0.60 N 62 1 "C3'" B DC 15 ? ? "O3'" B DC 15 ? ? P B DI 16 ? ? 146.06 119.70 26.36 1.20 Y 63 1 "C3'" B DI 16 ? ? "O3'" B DI 16 ? ? P B DT 17 ? ? 127.78 119.70 8.08 1.20 Y 64 1 "O5'" B DT 17 ? ? P B DT 17 ? ? OP2 B DT 17 ? ? 121.93 110.70 11.23 1.20 N 65 1 "O5'" B DT 17 ? ? "C5'" B DT 17 ? ? "C4'" B DT 17 ? ? 103.30 109.40 -6.10 0.80 N 66 1 P B DT 17 ? ? "O5'" B DT 17 ? ? "C5'" B DT 17 ? ? 133.71 120.90 12.81 1.60 N 67 1 "O4'" B DT 17 ? ? "C4'" B DT 17 ? ? "C3'" B DT 17 ? ? 100.27 104.50 -4.23 0.40 N 68 1 "C1'" B DT 17 ? ? "O4'" B DT 17 ? ? "C4'" B DT 17 ? ? 103.30 110.10 -6.80 1.00 N 69 1 "O4'" B DT 17 ? ? "C1'" B DT 17 ? ? "C2'" B DT 17 ? ? 100.95 105.90 -4.95 0.80 N 70 1 C2 B DT 17 ? ? N3 B DT 17 ? ? C4 B DT 17 ? ? 122.94 127.20 -4.26 0.60 N 71 1 C4 B DT 17 ? ? C5 B DT 17 ? ? C7 B DT 17 ? ? 123.09 119.00 4.09 0.60 N 72 1 C6 B DT 17 ? ? C5 B DT 17 ? ? C7 B DT 17 ? ? 117.57 122.90 -5.33 0.60 N 73 1 "C3'" B DT 17 ? ? "O3'" B DT 17 ? ? P B DT 18 ? ? 136.03 119.70 16.33 1.20 Y 74 1 "O5'" B DT 18 ? ? "C5'" B DT 18 ? ? "C4'" B DT 18 ? ? 103.58 109.40 -5.82 0.80 N 75 1 P B DT 18 ? ? "O5'" B DT 18 ? ? "C5'" B DT 18 ? ? 144.42 120.90 23.52 1.60 N 76 1 "O4'" B DT 18 ? ? "C1'" B DT 18 ? ? "C2'" B DT 18 ? ? 101.06 105.90 -4.84 0.80 N 77 1 "O4'" B DT 18 ? ? "C1'" B DT 18 ? ? N1 B DT 18 ? ? 98.72 108.00 -9.28 0.70 N 78 1 C2 B DT 18 ? ? N3 B DT 18 ? ? C4 B DT 18 ? ? 122.71 127.20 -4.49 0.60 N 79 1 N1 B DT 18 ? ? C2 B DT 18 ? ? O2 B DT 18 ? ? 117.63 123.10 -5.47 0.80 N 80 1 C4 B DT 18 ? ? C5 B DT 18 ? ? C7 B DT 18 ? ? 123.14 119.00 4.14 0.60 N 81 1 C6 B DT 18 ? ? C5 B DT 18 ? ? C7 B DT 18 ? ? 118.70 122.90 -4.20 0.60 N 82 1 "C3'" B DT 18 ? ? "O3'" B DT 18 ? ? P B DG 19 ? ? 128.72 119.70 9.02 1.20 Y 83 1 P B DG 19 ? ? "O5'" B DG 19 ? ? "C5'" B DG 19 ? ? 130.87 120.90 9.97 1.60 N 84 1 "C3'" B DG 19 ? ? "O3'" B DG 19 ? ? P B DG 20 ? ? 140.95 119.70 21.25 1.20 Y 85 1 OP1 B DG 20 ? ? P B DG 20 ? ? OP2 B DG 20 ? ? 109.50 119.60 -10.10 1.50 N 86 1 P B DG 20 ? ? "O5'" B DG 20 ? ? "C5'" B DG 20 ? ? 146.04 120.90 25.14 1.60 N 87 1 "O4'" B DG 20 ? ? "C1'" B DG 20 ? ? N9 B DG 20 ? ? 121.42 108.30 13.12 0.30 N 88 1 C6 B DG 20 ? ? N1 B DG 20 ? ? C2 B DG 20 ? ? 121.25 125.10 -3.85 0.60 N 89 1 C5 B DG 20 ? ? C6 B DG 20 ? ? N1 B DG 20 ? ? 114.69 111.50 3.19 0.50 N # loop_ _refine_B_iso.class _refine_B_iso.details _refine_B_iso.treatment _refine_B_iso.pdbx_refine_id 'ALL ATOMS' TR isotropic 'X-RAY DIFFRACTION' 'ALL WATERS' TR isotropic 'X-RAY DIFFRACTION' # loop_ _refine_occupancy.class _refine_occupancy.treatment _refine_occupancy.pdbx_refine_id 'ALL ATOMS' fix 'X-RAY DIFFRACTION' 'ALL WATERS' fix 'X-RAY DIFFRACTION' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal DA OP3 O N N 1 DA P P N N 2 DA OP1 O N N 3 DA OP2 O N N 4 DA "O5'" O N N 5 DA "C5'" C N N 6 DA "C4'" C N R 7 DA "O4'" O N N 8 DA "C3'" C N S 9 DA "O3'" O N N 10 DA "C2'" C N N 11 DA "C1'" C N R 12 DA N9 N Y N 13 DA C8 C Y N 14 DA N7 N Y N 15 DA C5 C Y N 16 DA C6 C Y N 17 DA N6 N N N 18 DA N1 N Y N 19 DA C2 C Y N 20 DA N3 N Y N 21 DA C4 C Y N 22 DA HOP3 H N N 23 DA HOP2 H N N 24 DA "H5'" H N N 25 DA "H5''" H N N 26 DA "H4'" H N N 27 DA "H3'" H N N 28 DA "HO3'" H N N 29 DA "H2'" H N N 30 DA "H2''" H N N 31 DA "H1'" H N N 32 DA H8 H N N 33 DA H61 H N N 34 DA H62 H N N 35 DA H2 H N N 36 DC OP3 O N N 37 DC P P N N 38 DC OP1 O N N 39 DC OP2 O N N 40 DC "O5'" O N N 41 DC "C5'" C N N 42 DC "C4'" C N R 43 DC "O4'" O N N 44 DC "C3'" C N S 45 DC "O3'" O N N 46 DC "C2'" C N N 47 DC "C1'" C N R 48 DC N1 N N N 49 DC C2 C N N 50 DC O2 O N N 51 DC N3 N N N 52 DC C4 C N N 53 DC N4 N N N 54 DC C5 C N N 55 DC C6 C N N 56 DC HOP3 H N N 57 DC HOP2 H N N 58 DC "H5'" H N N 59 DC "H5''" H N N 60 DC "H4'" H N N 61 DC "H3'" H N N 62 DC "HO3'" H N N 63 DC "H2'" H N N 64 DC "H2''" H N N 65 DC "H1'" H N N 66 DC H41 H N N 67 DC H42 H N N 68 DC H5 H N N 69 DC H6 H N N 70 DG OP3 O N N 71 DG P P N N 72 DG OP1 O N N 73 DG OP2 O N N 74 DG "O5'" O N N 75 DG "C5'" C N N 76 DG "C4'" C N R 77 DG "O4'" O N N 78 DG "C3'" C N S 79 DG "O3'" O N N 80 DG "C2'" C N N 81 DG "C1'" C N R 82 DG N9 N Y N 83 DG C8 C Y N 84 DG N7 N Y N 85 DG C5 C Y N 86 DG C6 C N N 87 DG O6 O N N 88 DG N1 N N N 89 DG C2 C N N 90 DG N2 N N N 91 DG N3 N N N 92 DG C4 C Y N 93 DG HOP3 H N N 94 DG HOP2 H N N 95 DG "H5'" H N N 96 DG "H5''" H N N 97 DG "H4'" H N N 98 DG "H3'" H N N 99 DG "HO3'" H N N 100 DG "H2'" H N N 101 DG "H2''" H N N 102 DG "H1'" H N N 103 DG H8 H N N 104 DG H1 H N N 105 DG H21 H N N 106 DG H22 H N N 107 DI OP3 O N N 108 DI P P N N 109 DI OP1 O N N 110 DI OP2 O N N 111 DI "O5'" O N N 112 DI "C5'" C N N 113 DI "C4'" C N R 114 DI "O4'" O N N 115 DI "C3'" C N S 116 DI "O3'" O N N 117 DI "C2'" C N N 118 DI "C1'" C N R 119 DI N9 N Y N 120 DI C8 C Y N 121 DI N7 N Y N 122 DI C5 C Y N 123 DI C6 C N N 124 DI O6 O N N 125 DI N1 N N N 126 DI C2 C N N 127 DI N3 N N N 128 DI C4 C Y N 129 DI HOP3 H N N 130 DI HOP2 H N N 131 DI "H5'" H N N 132 DI "H5''" H N N 133 DI "H4'" H N N 134 DI "H3'" H N N 135 DI "HO3'" H N N 136 DI "H2'" H N N 137 DI "H2''" H N N 138 DI "H1'" H N N 139 DI H8 H N N 140 DI H1 H N N 141 DI H2 H N N 142 DT OP3 O N N 143 DT P P N N 144 DT OP1 O N N 145 DT OP2 O N N 146 DT "O5'" O N N 147 DT "C5'" C N N 148 DT "C4'" C N R 149 DT "O4'" O N N 150 DT "C3'" C N S 151 DT "O3'" O N N 152 DT "C2'" C N N 153 DT "C1'" C N R 154 DT N1 N N N 155 DT C2 C N N 156 DT O2 O N N 157 DT N3 N N N 158 DT C4 C N N 159 DT O4 O N N 160 DT C5 C N N 161 DT C7 C N N 162 DT C6 C N N 163 DT HOP3 H N N 164 DT HOP2 H N N 165 DT "H5'" H N N 166 DT "H5''" H N N 167 DT "H4'" H N N 168 DT "H3'" H N N 169 DT "HO3'" H N N 170 DT "H2'" H N N 171 DT "H2''" H N N 172 DT "H1'" H N N 173 DT H3 H N N 174 DT H71 H N N 175 DT H72 H N N 176 DT H73 H N N 177 DT H6 H N N 178 HOH O O N N 179 HOH H1 H N N 180 HOH H2 H N N 181 MG MG MG N N 182 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DA OP3 P sing N N 1 DA OP3 HOP3 sing N N 2 DA P OP1 doub N N 3 DA P OP2 sing N N 4 DA P "O5'" sing N N 5 DA OP2 HOP2 sing N N 6 DA "O5'" "C5'" sing N N 7 DA "C5'" "C4'" sing N N 8 DA "C5'" "H5'" sing N N 9 DA "C5'" "H5''" sing N N 10 DA "C4'" "O4'" sing N N 11 DA "C4'" "C3'" sing N N 12 DA "C4'" "H4'" sing N N 13 DA "O4'" "C1'" sing N N 14 DA "C3'" "O3'" sing N N 15 DA "C3'" "C2'" sing N N 16 DA "C3'" "H3'" sing N N 17 DA "O3'" "HO3'" sing N N 18 DA "C2'" "C1'" sing N N 19 DA "C2'" "H2'" sing N N 20 DA "C2'" "H2''" sing N N 21 DA "C1'" N9 sing N N 22 DA "C1'" "H1'" sing N N 23 DA N9 C8 sing Y N 24 DA N9 C4 sing Y N 25 DA C8 N7 doub Y N 26 DA C8 H8 sing N N 27 DA N7 C5 sing Y N 28 DA C5 C6 sing Y N 29 DA C5 C4 doub Y N 30 DA C6 N6 sing N N 31 DA C6 N1 doub Y N 32 DA N6 H61 sing N N 33 DA N6 H62 sing N N 34 DA N1 C2 sing Y N 35 DA C2 N3 doub Y N 36 DA C2 H2 sing N N 37 DA N3 C4 sing Y N 38 DC OP3 P sing N N 39 DC OP3 HOP3 sing N N 40 DC P OP1 doub N N 41 DC P OP2 sing N N 42 DC P "O5'" sing N N 43 DC OP2 HOP2 sing N N 44 DC "O5'" "C5'" sing N N 45 DC "C5'" "C4'" sing N N 46 DC "C5'" "H5'" sing N N 47 DC "C5'" "H5''" sing N N 48 DC "C4'" "O4'" sing N N 49 DC "C4'" "C3'" sing N N 50 DC "C4'" "H4'" sing N N 51 DC "O4'" "C1'" sing N N 52 DC "C3'" "O3'" sing N N 53 DC "C3'" "C2'" sing N N 54 DC "C3'" "H3'" sing N N 55 DC "O3'" "HO3'" sing N N 56 DC "C2'" "C1'" sing N N 57 DC "C2'" "H2'" sing N N 58 DC "C2'" "H2''" sing N N 59 DC "C1'" N1 sing N N 60 DC "C1'" "H1'" sing N N 61 DC N1 C2 sing N N 62 DC N1 C6 sing N N 63 DC C2 O2 doub N N 64 DC C2 N3 sing N N 65 DC N3 C4 doub N N 66 DC C4 N4 sing N N 67 DC C4 C5 sing N N 68 DC N4 H41 sing N N 69 DC N4 H42 sing N N 70 DC C5 C6 doub N N 71 DC C5 H5 sing N N 72 DC C6 H6 sing N N 73 DG OP3 P sing N N 74 DG OP3 HOP3 sing N N 75 DG P OP1 doub N N 76 DG P OP2 sing N N 77 DG P "O5'" sing N N 78 DG OP2 HOP2 sing N N 79 DG "O5'" "C5'" sing N N 80 DG "C5'" "C4'" sing N N 81 DG "C5'" "H5'" sing N N 82 DG "C5'" "H5''" sing N N 83 DG "C4'" "O4'" sing N N 84 DG "C4'" "C3'" sing N N 85 DG "C4'" "H4'" sing N N 86 DG "O4'" "C1'" sing N N 87 DG "C3'" "O3'" sing N N 88 DG "C3'" "C2'" sing N N 89 DG "C3'" "H3'" sing N N 90 DG "O3'" "HO3'" sing N N 91 DG "C2'" "C1'" sing N N 92 DG "C2'" "H2'" sing N N 93 DG "C2'" "H2''" sing N N 94 DG "C1'" N9 sing N N 95 DG "C1'" "H1'" sing N N 96 DG N9 C8 sing Y N 97 DG N9 C4 sing Y N 98 DG C8 N7 doub Y N 99 DG C8 H8 sing N N 100 DG N7 C5 sing Y N 101 DG C5 C6 sing N N 102 DG C5 C4 doub Y N 103 DG C6 O6 doub N N 104 DG C6 N1 sing N N 105 DG N1 C2 sing N N 106 DG N1 H1 sing N N 107 DG C2 N2 sing N N 108 DG C2 N3 doub N N 109 DG N2 H21 sing N N 110 DG N2 H22 sing N N 111 DG N3 C4 sing N N 112 DI OP3 P sing N N 113 DI OP3 HOP3 sing N N 114 DI P OP1 doub N N 115 DI P OP2 sing N N 116 DI P "O5'" sing N N 117 DI OP2 HOP2 sing N N 118 DI "O5'" "C5'" sing N N 119 DI "C5'" "C4'" sing N N 120 DI "C5'" "H5'" sing N N 121 DI "C5'" "H5''" sing N N 122 DI "C4'" "O4'" sing N N 123 DI "C4'" "C3'" sing N N 124 DI "C4'" "H4'" sing N N 125 DI "O4'" "C1'" sing N N 126 DI "C3'" "O3'" sing N N 127 DI "C3'" "C2'" sing N N 128 DI "C3'" "H3'" sing N N 129 DI "O3'" "HO3'" sing N N 130 DI "C2'" "C1'" sing N N 131 DI "C2'" "H2'" sing N N 132 DI "C2'" "H2''" sing N N 133 DI "C1'" N9 sing N N 134 DI "C1'" "H1'" sing N N 135 DI N9 C8 sing Y N 136 DI N9 C4 sing Y N 137 DI C8 N7 doub Y N 138 DI C8 H8 sing N N 139 DI N7 C5 sing Y N 140 DI C5 C6 sing N N 141 DI C5 C4 doub Y N 142 DI C6 O6 doub N N 143 DI C6 N1 sing N N 144 DI N1 C2 sing N N 145 DI N1 H1 sing N N 146 DI C2 N3 doub N N 147 DI C2 H2 sing N N 148 DI N3 C4 sing N N 149 DT OP3 P sing N N 150 DT OP3 HOP3 sing N N 151 DT P OP1 doub N N 152 DT P OP2 sing N N 153 DT P "O5'" sing N N 154 DT OP2 HOP2 sing N N 155 DT "O5'" "C5'" sing N N 156 DT "C5'" "C4'" sing N N 157 DT "C5'" "H5'" sing N N 158 DT "C5'" "H5''" sing N N 159 DT "C4'" "O4'" sing N N 160 DT "C4'" "C3'" sing N N 161 DT "C4'" "H4'" sing N N 162 DT "O4'" "C1'" sing N N 163 DT "C3'" "O3'" sing N N 164 DT "C3'" "C2'" sing N N 165 DT "C3'" "H3'" sing N N 166 DT "O3'" "HO3'" sing N N 167 DT "C2'" "C1'" sing N N 168 DT "C2'" "H2'" sing N N 169 DT "C2'" "H2''" sing N N 170 DT "C1'" N1 sing N N 171 DT "C1'" "H1'" sing N N 172 DT N1 C2 sing N N 173 DT N1 C6 sing N N 174 DT C2 O2 doub N N 175 DT C2 N3 sing N N 176 DT N3 C4 sing N N 177 DT N3 H3 sing N N 178 DT C4 O4 doub N N 179 DT C4 C5 sing N N 180 DT C5 C7 sing N N 181 DT C5 C6 doub N N 182 DT C7 H71 sing N N 183 DT C7 H72 sing N N 184 DT C7 H73 sing N N 185 DT C6 H6 sing N N 186 HOH O H1 sing N N 187 HOH O H2 sing N N 188 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1D60 'b-form double helix' 1D60 'internal loop' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 1 1_555 B DG 10 1_555 -0.208 -0.364 0.507 -2.681 -2.407 -3.076 1 A_DC1:DG20_B A 1 ? B 20 ? 19 1 1 A DC 2 1_555 B DG 9 1_555 0.597 -0.507 -0.796 13.463 -8.175 -2.660 2 A_DC2:DG19_B A 2 ? B 19 ? 19 1 1 A DA 3 1_555 B DT 8 1_555 -0.601 -0.459 -0.167 0.176 -7.383 0.513 3 A_DA3:DT18_B A 3 ? B 18 ? 20 1 1 A DA 4 1_555 B DT 7 1_555 0.011 -0.200 0.160 3.565 -13.523 1.639 4 A_DA4:DT17_B A 4 ? B 17 ? 20 1 1 A DT 7 1_555 B DA 4 1_555 -0.474 -0.206 -0.116 -8.754 -9.301 -7.945 5 A_DT7:DA14_B A 7 ? B 14 ? 20 1 1 A DT 8 1_555 B DA 3 1_555 0.465 -0.114 0.032 -7.927 -10.534 2.981 6 A_DT8:DA13_B A 8 ? B 13 ? 20 1 1 A DG 9 1_555 B DC 2 1_555 0.324 -0.169 -0.282 -3.857 0.462 -0.698 7 A_DG9:DC12_B A 9 ? B 12 ? 19 1 1 A DG 10 1_555 B DC 1 1_555 0.310 -0.160 0.046 7.320 -5.135 1.380 8 A_DG10:DC11_B A 10 ? B 11 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 1 1_555 B DG 10 1_555 A DC 2 1_555 B DG 9 1_555 0.252 0.320 2.857 13.005 4.862 30.691 -0.161 1.476 2.755 8.651 -23.142 33.616 1 AA_DC1DC2:DG19DG20_BB A 1 ? B 20 ? A 2 ? B 19 ? 1 A DC 2 1_555 B DG 9 1_555 A DA 3 1_555 B DT 8 1_555 0.265 0.742 3.731 -3.444 7.587 29.810 -0.320 -1.274 3.748 14.397 6.535 30.927 2 AA_DC2DA3:DT18DG19_BB A 2 ? B 19 ? A 3 ? B 18 ? 1 A DA 3 1_555 B DT 8 1_555 A DA 4 1_555 B DT 7 1_555 -0.113 0.258 3.230 -4.099 1.961 39.787 0.154 -0.299 3.234 2.870 5.999 40.035 3 AA_DA3DA4:DT17DT18_BB A 3 ? B 18 ? A 4 ? B 17 ? 1 A DT 7 1_555 B DA 4 1_555 A DT 8 1_555 B DA 3 1_555 0.330 0.039 3.263 -0.723 -0.550 39.620 0.122 -0.571 3.256 -0.811 1.067 39.630 4 AA_DT7DT8:DA13DA14_BB A 7 ? B 14 ? A 8 ? B 13 ? 1 A DT 8 1_555 B DA 3 1_555 A DG 9 1_555 B DC 2 1_555 0.291 0.982 3.288 3.356 6.149 34.079 0.670 0.044 3.420 10.356 -5.652 34.770 5 AA_DT8DG9:DC12DA13_BB A 8 ? B 13 ? A 9 ? B 12 ? 1 A DG 9 1_555 B DC 2 1_555 A DG 10 1_555 B DC 1 1_555 -0.283 0.946 3.219 -2.177 1.146 30.595 1.563 0.110 3.263 2.168 4.117 30.691 6 AA_DG9DG10:DC11DC12_BB A 9 ? B 12 ? A 10 ? B 11 ? # _atom_sites.entry_id 1D60 _atom_sites.fract_transf_matrix[1][1] 0.030093 _atom_sites.fract_transf_matrix[1][2] 0.017374 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.034749 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010552 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P # loop_