data_1D66 # _entry.id 1D66 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.385 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1D66 pdb_00001d66 10.2210/pdb1d66/pdb RCSB PDT003 ? ? WWPDB D_1000172667 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1992-03-06 2 'Structure model' 1 1 2008-05-22 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-02-07 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_struct_conn_angle 5 4 'Structure model' struct_conn 6 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.value' 8 4 'Structure model' '_struct_conn.pdbx_dist_value' 9 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 10 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 11 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 12 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 13 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 14 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 15 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 16 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 17 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 18 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 19 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 20 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 21 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 22 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 23 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1D66 _pdbx_database_status.recvd_initial_deposition_date 1992-03-06 _pdbx_database_status.deposit_site BNL _pdbx_database_status.process_site BNL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Marmorstein, R.' 1 'Carey, M.' 2 'Ptashne, M.' 3 'Harrison, S.C.' 4 # _citation.id primary _citation.title 'DNA recognition by GAL4: structure of a protein-DNA complex.' _citation.journal_abbrev Nature _citation.journal_volume 356 _citation.page_first 408 _citation.page_last 414 _citation.year 1992 _citation.journal_id_ASTM NATUAS _citation.country UK _citation.journal_id_ISSN 0028-0836 _citation.journal_id_CSD 0006 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 1557122 _citation.pdbx_database_id_DOI 10.1038/356408a0 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Marmorstein, R.' 1 ? primary 'Carey, M.' 2 ? primary 'Ptashne, M.' 3 ? primary 'Harrison, S.C.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*CP*CP*GP*GP*AP*GP*GP*AP*CP*AP*GP*TP*CP*CP*TP*CP*C P*GP*G)-3') ; 5831.761 1 ? ? ? ? 2 polymer syn ;DNA (5'-D(*CP*CP*GP*GP*AP*GP*GP*AP*CP*TP*GP*TP*CP*CP*TP*CP*C P*GP*G)-3') ; 5822.748 1 ? ? ? ? 3 polymer man 'PROTEIN (GAL4)' 7816.353 2 ? ? ? ? 4 non-polymer syn 'CADMIUM ION' 112.411 4 ? ? ? ? 5 water nat water 18.015 51 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DC)(DC)(DG)(DG)(DA)(DG)(DG)(DA)(DC)(DA)(DG)(DT)(DC)(DC)(DT)(DC)(DC)(DG)(DG)' CCGGAGGACAGTCCTCCGG D ? 2 polydeoxyribonucleotide no no '(DC)(DC)(DG)(DG)(DA)(DG)(DG)(DA)(DC)(DT)(DG)(DT)(DC)(DC)(DT)(DC)(DC)(DG)(DG)' CCGGAGGACTGTCCTCCGG E ? 3 'polypeptide(L)' no no MKLLSSIEQACDICRLKKLKCSKEKPKCAKCLKNNWECRYSPKTKRSPLTRAHLTEVESRLERLEF MKLLSSIEQACDICRLKKLKCSKEKPKCAKCLKNNWECRYSPKTKRSPLTRAHLTEVESRLERLEF A,B ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'CADMIUM ION' CD 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DC n 1 3 DG n 1 4 DG n 1 5 DA n 1 6 DG n 1 7 DG n 1 8 DA n 1 9 DC n 1 10 DA n 1 11 DG n 1 12 DT n 1 13 DC n 1 14 DC n 1 15 DT n 1 16 DC n 1 17 DC n 1 18 DG n 1 19 DG n 2 1 DC n 2 2 DC n 2 3 DG n 2 4 DG n 2 5 DA n 2 6 DG n 2 7 DG n 2 8 DA n 2 9 DC n 2 10 DT n 2 11 DG n 2 12 DT n 2 13 DC n 2 14 DC n 2 15 DT n 2 16 DC n 2 17 DC n 2 18 DG n 2 19 DG n 3 1 MET n 3 2 LYS n 3 3 LEU n 3 4 LEU n 3 5 SER n 3 6 SER n 3 7 ILE n 3 8 GLU n 3 9 GLN n 3 10 ALA n 3 11 CYS n 3 12 ASP n 3 13 ILE n 3 14 CYS n 3 15 ARG n 3 16 LEU n 3 17 LYS n 3 18 LYS n 3 19 LEU n 3 20 LYS n 3 21 CYS n 3 22 SER n 3 23 LYS n 3 24 GLU n 3 25 LYS n 3 26 PRO n 3 27 LYS n 3 28 CYS n 3 29 ALA n 3 30 LYS n 3 31 CYS n 3 32 LEU n 3 33 LYS n 3 34 ASN n 3 35 ASN n 3 36 TRP n 3 37 GLU n 3 38 CYS n 3 39 ARG n 3 40 TYR n 3 41 SER n 3 42 PRO n 3 43 LYS n 3 44 THR n 3 45 LYS n 3 46 ARG n 3 47 SER n 3 48 PRO n 3 49 LEU n 3 50 THR n 3 51 ARG n 3 52 ALA n 3 53 HIS n 3 54 LEU n 3 55 THR n 3 56 GLU n 3 57 VAL n 3 58 GLU n 3 59 SER n 3 60 ARG n 3 61 LEU n 3 62 GLU n 3 63 ARG n 3 64 LEU n 3 65 GLU n 3 66 PHE n # _entity_src_gen.entity_id 3 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ;baker's yeast ; _entity_src_gen.gene_src_genus Saccharomyces _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Saccharomyces cerevisiae' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 4932 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CD non-polymer . 'CADMIUM ION' ? 'Cd 2' 112.411 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 1 1 DC C D . n A 1 2 DC 2 2 2 DC C D . n A 1 3 DG 3 3 3 DG G D . n A 1 4 DG 4 4 4 DG G D . n A 1 5 DA 5 5 5 DA A D . n A 1 6 DG 6 6 6 DG G D . n A 1 7 DG 7 7 7 DG G D . n A 1 8 DA 8 8 8 DA A D . n A 1 9 DC 9 9 9 DC C D . n A 1 10 DA 10 10 10 DA A D . n A 1 11 DG 11 11 11 DG G D . n A 1 12 DT 12 12 12 DT T D . n A 1 13 DC 13 13 13 DC C D . n A 1 14 DC 14 14 14 DC C D . n A 1 15 DT 15 15 15 DT T D . n A 1 16 DC 16 16 16 DC C D . n A 1 17 DC 17 17 17 DC C D . n A 1 18 DG 18 18 18 DG G D . n A 1 19 DG 19 19 19 DG G D . n B 2 1 DC 1 20 20 DC C E . n B 2 2 DC 2 21 21 DC C E . n B 2 3 DG 3 22 22 DG G E . n B 2 4 DG 4 23 23 DG G E . n B 2 5 DA 5 24 24 DA A E . n B 2 6 DG 6 25 25 DG G E . n B 2 7 DG 7 26 26 DG G E . n B 2 8 DA 8 27 27 DA A E . n B 2 9 DC 9 28 28 DC C E . n B 2 10 DT 10 29 29 DT T E . n B 2 11 DG 11 30 30 DG G E . n B 2 12 DT 12 31 31 DT T E . n B 2 13 DC 13 32 32 DC C E . n B 2 14 DC 14 33 33 DC C E . n B 2 15 DT 15 34 34 DT T E . n B 2 16 DC 16 35 35 DC C E . n B 2 17 DC 17 36 36 DC C E . n B 2 18 DG 18 37 37 DG G E . n B 2 19 DG 19 38 38 DG G E . n C 3 1 MET 1 1 ? ? ? A . n C 3 2 LYS 2 2 ? ? ? A . n C 3 3 LEU 3 3 ? ? ? A . n C 3 4 LEU 4 4 ? ? ? A . n C 3 5 SER 5 5 ? ? ? A . n C 3 6 SER 6 6 ? ? ? A . n C 3 7 ILE 7 7 ? ? ? A . n C 3 8 GLU 8 8 8 GLU GLU A . n C 3 9 GLN 9 9 9 GLN GLN A . n C 3 10 ALA 10 10 10 ALA ALA A . n C 3 11 CYS 11 11 11 CYS CYS A . n C 3 12 ASP 12 12 12 ASP ASP A . n C 3 13 ILE 13 13 13 ILE ILE A . n C 3 14 CYS 14 14 14 CYS CYS A . n C 3 15 ARG 15 15 15 ARG ARG A . n C 3 16 LEU 16 16 16 LEU LEU A . n C 3 17 LYS 17 17 17 LYS LYS A . n C 3 18 LYS 18 18 18 LYS LYS A . n C 3 19 LEU 19 19 19 LEU LEU A . n C 3 20 LYS 20 20 20 LYS LYS A . n C 3 21 CYS 21 21 21 CYS CYS A . n C 3 22 SER 22 22 22 SER SER A . n C 3 23 LYS 23 23 23 LYS LYS A . n C 3 24 GLU 24 24 24 GLU GLU A . n C 3 25 LYS 25 25 25 LYS LYS A . n C 3 26 PRO 26 26 26 PRO PRO A . n C 3 27 LYS 27 27 27 LYS LYS A . n C 3 28 CYS 28 28 28 CYS CYS A . n C 3 29 ALA 29 29 29 ALA ALA A . n C 3 30 LYS 30 30 30 LYS LYS A . n C 3 31 CYS 31 31 31 CYS CYS A . n C 3 32 LEU 32 32 32 LEU LEU A . n C 3 33 LYS 33 33 33 LYS LYS A . n C 3 34 ASN 34 34 34 ASN ASN A . n C 3 35 ASN 35 35 35 ASN ASN A . n C 3 36 TRP 36 36 36 TRP TRP A . n C 3 37 GLU 37 37 37 GLU GLU A . n C 3 38 CYS 38 38 38 CYS CYS A . n C 3 39 ARG 39 39 39 ARG ARG A . n C 3 40 TYR 40 40 40 TYR TYR A . n C 3 41 SER 41 41 41 SER SER A . n C 3 42 PRO 42 42 42 PRO PRO A . n C 3 43 LYS 43 43 43 LYS LYS A . n C 3 44 THR 44 44 44 THR THR A . n C 3 45 LYS 45 45 45 LYS LYS A . n C 3 46 ARG 46 46 46 ARG ARG A . n C 3 47 SER 47 47 47 SER SER A . n C 3 48 PRO 48 48 48 PRO PRO A . n C 3 49 LEU 49 49 49 LEU LEU A . n C 3 50 THR 50 50 50 THR THR A . n C 3 51 ARG 51 51 51 ARG ARG A . n C 3 52 ALA 52 52 52 ALA ALA A . n C 3 53 HIS 53 53 53 HIS HIS A . n C 3 54 LEU 54 54 54 LEU LEU A . n C 3 55 THR 55 55 55 THR THR A . n C 3 56 GLU 56 56 56 GLU GLU A . n C 3 57 VAL 57 57 57 VAL VAL A . n C 3 58 GLU 58 58 58 GLU GLU A . n C 3 59 SER 59 59 59 SER SER A . n C 3 60 ARG 60 60 60 ARG ARG A . n C 3 61 LEU 61 61 61 LEU LEU A . n C 3 62 GLU 62 62 62 GLU GLU A . n C 3 63 ARG 63 63 63 ARG ARG A . n C 3 64 LEU 64 64 64 LEU LEU A . n C 3 65 GLU 65 65 ? ? ? A . n C 3 66 PHE 66 66 ? ? ? A . n D 3 1 MET 1 1 ? ? ? B . n D 3 2 LYS 2 2 ? ? ? B . n D 3 3 LEU 3 3 ? ? ? B . n D 3 4 LEU 4 4 ? ? ? B . n D 3 5 SER 5 5 ? ? ? B . n D 3 6 SER 6 6 ? ? ? B . n D 3 7 ILE 7 7 ? ? ? B . n D 3 8 GLU 8 8 8 GLU GLU B . n D 3 9 GLN 9 9 9 GLN GLN B . n D 3 10 ALA 10 10 10 ALA ALA B . n D 3 11 CYS 11 11 11 CYS CYS B . n D 3 12 ASP 12 12 12 ASP ASP B . n D 3 13 ILE 13 13 13 ILE ILE B . n D 3 14 CYS 14 14 14 CYS CYS B . n D 3 15 ARG 15 15 15 ARG ARG B . n D 3 16 LEU 16 16 16 LEU LEU B . n D 3 17 LYS 17 17 17 LYS LYS B . n D 3 18 LYS 18 18 18 LYS LYS B . n D 3 19 LEU 19 19 19 LEU LEU B . n D 3 20 LYS 20 20 20 LYS LYS B . n D 3 21 CYS 21 21 21 CYS CYS B . n D 3 22 SER 22 22 22 SER SER B . n D 3 23 LYS 23 23 23 LYS LYS B . n D 3 24 GLU 24 24 24 GLU GLU B . n D 3 25 LYS 25 25 25 LYS LYS B . n D 3 26 PRO 26 26 26 PRO PRO B . n D 3 27 LYS 27 27 27 LYS LYS B . n D 3 28 CYS 28 28 28 CYS CYS B . n D 3 29 ALA 29 29 29 ALA ALA B . n D 3 30 LYS 30 30 30 LYS LYS B . n D 3 31 CYS 31 31 31 CYS CYS B . n D 3 32 LEU 32 32 32 LEU LEU B . n D 3 33 LYS 33 33 33 LYS LYS B . n D 3 34 ASN 34 34 34 ASN ASN B . n D 3 35 ASN 35 35 35 ASN ASN B . n D 3 36 TRP 36 36 36 TRP TRP B . n D 3 37 GLU 37 37 37 GLU GLU B . n D 3 38 CYS 38 38 38 CYS CYS B . n D 3 39 ARG 39 39 39 ARG ARG B . n D 3 40 TYR 40 40 40 TYR TYR B . n D 3 41 SER 41 41 41 SER SER B . n D 3 42 PRO 42 42 42 PRO PRO B . n D 3 43 LYS 43 43 43 LYS LYS B . n D 3 44 THR 44 44 44 THR THR B . n D 3 45 LYS 45 45 45 LYS LYS B . n D 3 46 ARG 46 46 46 ARG ARG B . n D 3 47 SER 47 47 47 SER SER B . n D 3 48 PRO 48 48 48 PRO PRO B . n D 3 49 LEU 49 49 49 LEU LEU B . n D 3 50 THR 50 50 50 THR THR B . n D 3 51 ARG 51 51 51 ARG ARG B . n D 3 52 ALA 52 52 52 ALA ALA B . n D 3 53 HIS 53 53 53 HIS HIS B . n D 3 54 LEU 54 54 54 LEU LEU B . n D 3 55 THR 55 55 55 THR THR B . n D 3 56 GLU 56 56 56 GLU GLU B . n D 3 57 VAL 57 57 57 VAL VAL B . n D 3 58 GLU 58 58 58 GLU GLU B . n D 3 59 SER 59 59 59 SER SER B . n D 3 60 ARG 60 60 60 ARG ARG B . n D 3 61 LEU 61 61 61 LEU LEU B . n D 3 62 GLU 62 62 62 GLU GLU B . n D 3 63 ARG 63 63 63 ARG ARG B . n D 3 64 LEU 64 64 64 LEU LEU B . n D 3 65 GLU 65 65 ? ? ? B . n D 3 66 PHE 66 66 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 4 CD 1 67 41 CD CD A . F 4 CD 1 68 42 CD CD A . G 4 CD 1 67 39 CD CD B . H 4 CD 1 68 40 CD CD B . I 5 HOH 1 306 306 HOH HOH D . I 5 HOH 2 307 307 HOH HOH D . I 5 HOH 3 319 319 HOH HOH D . I 5 HOH 4 322 322 HOH HOH D . I 5 HOH 5 324 324 HOH HOH D . I 5 HOH 6 333 333 HOH HOH D . I 5 HOH 7 348 348 HOH HOH D . I 5 HOH 8 352 352 HOH HOH D . I 5 HOH 9 381 381 HOH HOH D . I 5 HOH 10 384 384 HOH HOH D . I 5 HOH 11 385 385 HOH HOH D . I 5 HOH 12 397 397 HOH HOH D . I 5 HOH 13 410 410 HOH HOH D . J 5 HOH 1 323 323 HOH HOH E . J 5 HOH 2 328 328 HOH HOH E . J 5 HOH 3 332 332 HOH HOH E . J 5 HOH 4 344 344 HOH HOH E . J 5 HOH 5 356 356 HOH HOH E . J 5 HOH 6 358 358 HOH HOH E . J 5 HOH 7 366 366 HOH HOH E . J 5 HOH 8 391 391 HOH HOH E . J 5 HOH 9 392 392 HOH HOH E . J 5 HOH 10 406 406 HOH HOH E . J 5 HOH 11 430 430 HOH HOH E . K 5 HOH 1 301 301 HOH HOH A . K 5 HOH 2 308 308 HOH HOH A . K 5 HOH 3 314 314 HOH HOH A . K 5 HOH 4 317 317 HOH HOH A . K 5 HOH 5 321 321 HOH HOH A . K 5 HOH 6 325 325 HOH HOH A . K 5 HOH 7 329 329 HOH HOH A . K 5 HOH 8 343 343 HOH HOH A . K 5 HOH 9 346 346 HOH HOH A . K 5 HOH 10 387 387 HOH HOH A . K 5 HOH 11 424 424 HOH HOH A . K 5 HOH 12 425 425 HOH HOH A . K 5 HOH 13 429 429 HOH HOH A . K 5 HOH 14 431 431 HOH HOH A . L 5 HOH 1 303 303 HOH HOH B . L 5 HOH 2 304 304 HOH HOH B . L 5 HOH 3 311 311 HOH HOH B . L 5 HOH 4 316 316 HOH HOH B . L 5 HOH 5 340 340 HOH HOH B . L 5 HOH 6 342 342 HOH HOH B . L 5 HOH 7 353 353 HOH HOH B . L 5 HOH 8 377 377 HOH HOH B . L 5 HOH 9 379 379 HOH HOH B . L 5 HOH 10 380 380 HOH HOH B . L 5 HOH 11 382 382 HOH HOH B . L 5 HOH 12 414 414 HOH HOH B . L 5 HOH 13 432 432 HOH HOH B . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal X-PLOR refinement . ? 1 TNT refinement . ? 2 CORELS refinement . ? 3 # _cell.entry_id 1D66 _cell.length_a 80.850 _cell.length_b 80.850 _cell.length_c 73.700 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1D66 _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 # _exptl.entry_id 1D66 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 43.17 _exptl_crystal.density_Matthews 2.16 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.80 _exptl_crystal_grow.pdbx_details 'pH 6.80, VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pdbx_pH_range ? # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 WATER ? ? ? 1 2 1 MPD ? ? ? 1 3 1 CACL2 ? ? ? 1 4 1 NACL ? ? ? 1 5 1 'NA CACODYLATE' ? ? ? 1 6 2 WATER ? ? ? 1 7 2 MPD ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 118.00 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'AREA DETECTOR' _diffrn_detector.type SIEMENS _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type RIGAKU _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1D66 _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low ? _reflns.d_resolution_high 2.700 _reflns.number_obs ? _reflns.number_all ? _reflns.percent_possible_obs ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _refine.entry_id 1D66 _refine.ls_number_reflns_obs 6411 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 16.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 8.000 _refine.ls_d_res_high 2.700 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.2300000 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2300000 _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 934 _refine_hist.pdbx_number_atoms_nucleic_acid 773 _refine_hist.pdbx_number_atoms_ligand 4 _refine_hist.number_atoms_solvent 51 _refine_hist.number_atoms_total 1762 _refine_hist.d_res_high 2.700 _refine_hist.d_res_low 8.000 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.015 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 2.90 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _struct_ncs_oper.id 1 _struct_ncs_oper.code given _struct_ncs_oper.details ? _struct_ncs_oper.matrix[1][1] 0.969990 _struct_ncs_oper.matrix[1][2] 0.014680 _struct_ncs_oper.matrix[1][3] -0.242700 _struct_ncs_oper.matrix[2][1] 0.014290 _struct_ncs_oper.matrix[2][2] -0.999900 _struct_ncs_oper.matrix[2][3] -0.003900 _struct_ncs_oper.matrix[3][1] -0.242710 _struct_ncs_oper.matrix[3][2] -0.000190 _struct_ncs_oper.matrix[3][3] -0.970100 _struct_ncs_oper.vector[1] 7.19246 _struct_ncs_oper.vector[2] 83.38941 _struct_ncs_oper.vector[3] 62.87497 # _database_PDB_matrix.entry_id 1D66 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1D66 _struct.title 'DNA RECOGNITION BY GAL4: STRUCTURE OF A PROTEIN/DNA COMPLEX' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1D66 _struct_keywords.pdbx_keywords TRANSCRIPTION/DNA _struct_keywords.text 'PROTEIN-DNA COMPLEX, DOUBLE HELIX, TRANSCRIPTION-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? F N N 4 ? G N N 4 ? H N N 4 ? I N N 5 ? J N N 5 ? K N N 5 ? L N N 5 ? # loop_ _struct_ref.id _struct_ref.db_code _struct_ref.db_name _struct_ref.entity_id _struct_ref.pdbx_db_accession _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_db_isoform 1 GAL4_YEAST UNP 3 P04386 ? ? ? 2 1D66 PDB 1 1D66 ? ? ? 3 1D66 PDB 2 1D66 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1D66 A 1 ? 65 ? P04386 1 ? 65 ? 1 65 2 1 1D66 B 1 ? 65 ? P04386 1 ? 65 ? 1 65 3 2 1D66 D 1 ? 19 ? 1D66 1 ? 19 ? 1 19 4 3 1D66 E 1 ? 19 ? 1D66 20 ? 38 ? 20 38 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ;THE TRANSFORMATION PRESENTED ON *MTRIX* RECORDS BELOW WILL YIELD APPROXIMATE COORDINATES FOR CHAIN *B* WHEN APPLIED TO CHAIN *A*. ; _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 H1A CYS C 11 ? LYS C 18 ? CYS A 11 LYS A 18 1 ? 8 HELX_P HELX_P2 H2A CYS C 28 ? ASN C 35 ? CYS A 28 ASN A 35 1 ? 8 HELX_P HELX_P3 H3A THR C 50 ? LEU C 64 ? THR A 50 LEU A 64 1 ? 15 HELX_P HELX_P4 H1B CYS D 11 ? LYS D 18 ? CYS B 11 LYS B 18 1 ? 8 HELX_P HELX_P5 H2B CYS D 28 ? ASN D 35 ? CYS B 28 ASN B 35 1 ? 8 HELX_P HELX_P6 H3B THR D 50 ? LEU D 64 ? THR B 50 LEU B 64 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? C CYS 11 SG ? ? ? 1_555 E CD . CD ? ? A CYS 11 A CD 67 1_555 ? ? ? ? ? ? ? 2.489 ? ? metalc2 metalc ? ? C CYS 11 SG ? ? ? 1_555 F CD . CD ? ? A CYS 11 A CD 68 1_555 ? ? ? ? ? ? ? 2.517 ? ? metalc3 metalc ? ? C CYS 14 SG ? ? ? 1_555 F CD . CD ? ? A CYS 14 A CD 68 1_555 ? ? ? ? ? ? ? 2.498 ? ? metalc4 metalc ? ? C CYS 21 SG ? ? ? 1_555 F CD . CD ? ? A CYS 21 A CD 68 1_555 ? ? ? ? ? ? ? 2.497 ? ? metalc5 metalc ? ? C CYS 28 SG ? ? ? 1_555 E CD . CD ? ? A CYS 28 A CD 67 1_555 ? ? ? ? ? ? ? 2.550 ? ? metalc6 metalc ? ? C CYS 28 SG ? ? ? 1_555 F CD . CD ? ? A CYS 28 A CD 68 1_555 ? ? ? ? ? ? ? 2.514 ? ? metalc7 metalc ? ? C CYS 31 SG ? ? ? 1_555 E CD . CD ? ? A CYS 31 A CD 67 1_555 ? ? ? ? ? ? ? 2.488 ? ? metalc8 metalc ? ? C CYS 38 SG ? ? ? 1_555 E CD . CD ? ? A CYS 38 A CD 67 1_555 ? ? ? ? ? ? ? 2.455 ? ? metalc9 metalc ? ? D CYS 11 SG ? ? ? 1_555 G CD . CD ? ? B CYS 11 B CD 67 1_555 ? ? ? ? ? ? ? 2.540 ? ? metalc10 metalc ? ? D CYS 11 SG ? ? ? 1_555 H CD . CD ? ? B CYS 11 B CD 68 1_555 ? ? ? ? ? ? ? 2.492 ? ? metalc11 metalc ? ? D CYS 14 SG ? ? ? 1_555 H CD . CD ? ? B CYS 14 B CD 68 1_555 ? ? ? ? ? ? ? 2.479 ? ? metalc12 metalc ? ? D CYS 21 SG ? ? ? 1_555 H CD . CD ? ? B CYS 21 B CD 68 1_555 ? ? ? ? ? ? ? 2.468 ? ? metalc13 metalc ? ? D CYS 28 SG ? ? ? 1_555 G CD . CD ? ? B CYS 28 B CD 67 1_555 ? ? ? ? ? ? ? 2.539 ? ? metalc14 metalc ? ? D CYS 28 SG ? ? ? 1_555 H CD . CD ? ? B CYS 28 B CD 68 1_555 ? ? ? ? ? ? ? 2.495 ? ? metalc15 metalc ? ? D CYS 31 SG ? ? ? 1_555 G CD . CD ? ? B CYS 31 B CD 67 1_555 ? ? ? ? ? ? ? 2.454 ? ? metalc16 metalc ? ? D CYS 38 SG ? ? ? 1_555 G CD . CD ? ? B CYS 38 B CD 67 1_555 ? ? ? ? ? ? ? 2.478 ? ? hydrog1 hydrog ? ? A DC 1 N3 ? ? ? 1_555 B DG 19 N1 ? ? D DC 1 E DG 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DC 1 N4 ? ? ? 1_555 B DG 19 O6 ? ? D DC 1 E DG 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 1 O2 ? ? ? 1_555 B DG 19 N2 ? ? D DC 1 E DG 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DC 2 N3 ? ? ? 1_555 B DG 18 N1 ? ? D DC 2 E DG 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DC 2 N4 ? ? ? 1_555 B DG 18 O6 ? ? D DC 2 E DG 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DC 2 O2 ? ? ? 1_555 B DG 18 N2 ? ? D DC 2 E DG 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DG 3 N1 ? ? ? 1_555 B DC 17 N3 ? ? D DG 3 E DC 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DG 3 N2 ? ? ? 1_555 B DC 17 O2 ? ? D DG 3 E DC 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DG 3 O6 ? ? ? 1_555 B DC 17 N4 ? ? D DG 3 E DC 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DG 4 N1 ? ? ? 1_555 B DC 16 N3 ? ? D DG 4 E DC 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DG 4 N2 ? ? ? 1_555 B DC 16 O2 ? ? D DG 4 E DC 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DG 4 O6 ? ? ? 1_555 B DC 16 N4 ? ? D DG 4 E DC 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DG 6 N1 ? ? ? 1_555 B DC 14 N3 ? ? D DG 6 E DC 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DG 6 N2 ? ? ? 1_555 B DC 14 O2 ? ? D DG 6 E DC 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DG 6 O6 ? ? ? 1_555 B DC 14 N4 ? ? D DG 6 E DC 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DG 7 N1 ? ? ? 1_555 B DC 13 N3 ? ? D DG 7 E DC 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DG 7 N2 ? ? ? 1_555 B DC 13 O2 ? ? D DG 7 E DC 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DG 7 O6 ? ? ? 1_555 B DC 13 N4 ? ? D DG 7 E DC 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DA 8 N1 ? ? ? 1_555 B DT 12 N3 ? ? D DA 8 E DT 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DA 8 N6 ? ? ? 1_555 B DT 12 O4 ? ? D DA 8 E DT 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DC 9 N3 ? ? ? 1_555 B DG 11 N1 ? ? D DC 9 E DG 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DC 9 N4 ? ? ? 1_555 B DG 11 O6 ? ? D DC 9 E DG 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DC 9 O2 ? ? ? 1_555 B DG 11 N2 ? ? D DC 9 E DG 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DA 10 N1 ? ? ? 1_555 B DT 10 N3 ? ? D DA 10 E DT 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DA 10 N6 ? ? ? 1_555 B DT 10 O4 ? ? D DA 10 E DT 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DG 11 O6 ? ? ? 1_555 B DC 9 N4 ? ? D DG 11 E DC 28 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? hydrog27 hydrog ? ? A DT 12 N3 ? ? ? 1_555 B DA 8 N1 ? ? D DT 12 E DA 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DT 12 O4 ? ? ? 1_555 B DA 8 N6 ? ? D DT 12 E DA 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DC 13 N3 ? ? ? 1_555 B DG 7 N1 ? ? D DC 13 E DG 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DC 13 N4 ? ? ? 1_555 B DG 7 O6 ? ? D DC 13 E DG 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A DC 13 O2 ? ? ? 1_555 B DG 7 N2 ? ? D DC 13 E DG 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A DC 14 N4 ? ? ? 1_555 B DG 6 O6 ? ? D DC 14 E DG 25 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? hydrog33 hydrog ? ? A DT 15 N3 ? ? ? 1_555 B DA 5 N1 ? ? D DT 15 E DA 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A DT 15 O4 ? ? ? 1_555 B DA 5 N6 ? ? D DT 15 E DA 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A DC 16 N3 ? ? ? 1_555 B DG 4 N1 ? ? D DC 16 E DG 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A DC 16 N4 ? ? ? 1_555 B DG 4 O6 ? ? D DC 16 E DG 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A DC 16 O2 ? ? ? 1_555 B DG 4 N2 ? ? D DC 16 E DG 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A DC 17 N3 ? ? ? 1_555 B DG 3 N1 ? ? D DC 17 E DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A DC 17 N4 ? ? ? 1_555 B DG 3 O6 ? ? D DC 17 E DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A DC 17 O2 ? ? ? 1_555 B DG 3 N2 ? ? D DC 17 E DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A DG 18 N1 ? ? ? 1_555 B DC 2 N3 ? ? D DG 18 E DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A DG 18 N2 ? ? ? 1_555 B DC 2 O2 ? ? D DG 18 E DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A DG 18 O6 ? ? ? 1_555 B DC 2 N4 ? ? D DG 18 E DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A DG 19 N1 ? ? ? 1_555 B DC 1 N3 ? ? D DG 19 E DC 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? A DG 19 N2 ? ? ? 1_555 B DC 1 O2 ? ? D DG 19 E DC 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? A DG 19 O6 ? ? ? 1_555 B DC 1 N4 ? ? D DG 19 E DC 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? C CYS 11 ? A CYS 11 ? 1_555 CD ? E CD . ? A CD 67 ? 1_555 SG ? C CYS 28 ? A CYS 28 ? 1_555 91.9 ? 2 SG ? C CYS 11 ? A CYS 11 ? 1_555 CD ? E CD . ? A CD 67 ? 1_555 SG ? C CYS 31 ? A CYS 31 ? 1_555 119.6 ? 3 SG ? C CYS 28 ? A CYS 28 ? 1_555 CD ? E CD . ? A CD 67 ? 1_555 SG ? C CYS 31 ? A CYS 31 ? 1_555 104.5 ? 4 SG ? C CYS 11 ? A CYS 11 ? 1_555 CD ? E CD . ? A CD 67 ? 1_555 SG ? C CYS 38 ? A CYS 38 ? 1_555 121.9 ? 5 SG ? C CYS 28 ? A CYS 28 ? 1_555 CD ? E CD . ? A CD 67 ? 1_555 SG ? C CYS 38 ? A CYS 38 ? 1_555 108.5 ? 6 SG ? C CYS 31 ? A CYS 31 ? 1_555 CD ? E CD . ? A CD 67 ? 1_555 SG ? C CYS 38 ? A CYS 38 ? 1_555 107.2 ? 7 SG ? C CYS 11 ? A CYS 11 ? 1_555 CD ? F CD . ? A CD 68 ? 1_555 SG ? C CYS 14 ? A CYS 14 ? 1_555 106.4 ? 8 SG ? C CYS 11 ? A CYS 11 ? 1_555 CD ? F CD . ? A CD 68 ? 1_555 SG ? C CYS 21 ? A CYS 21 ? 1_555 104.3 ? 9 SG ? C CYS 14 ? A CYS 14 ? 1_555 CD ? F CD . ? A CD 68 ? 1_555 SG ? C CYS 21 ? A CYS 21 ? 1_555 112.5 ? 10 SG ? C CYS 11 ? A CYS 11 ? 1_555 CD ? F CD . ? A CD 68 ? 1_555 SG ? C CYS 28 ? A CYS 28 ? 1_555 92.1 ? 11 SG ? C CYS 14 ? A CYS 14 ? 1_555 CD ? F CD . ? A CD 68 ? 1_555 SG ? C CYS 28 ? A CYS 28 ? 1_555 123.8 ? 12 SG ? C CYS 21 ? A CYS 21 ? 1_555 CD ? F CD . ? A CD 68 ? 1_555 SG ? C CYS 28 ? A CYS 28 ? 1_555 113.3 ? 13 SG ? D CYS 11 ? B CYS 11 ? 1_555 CD ? G CD . ? B CD 67 ? 1_555 SG ? D CYS 28 ? B CYS 28 ? 1_555 92.3 ? 14 SG ? D CYS 11 ? B CYS 11 ? 1_555 CD ? G CD . ? B CD 67 ? 1_555 SG ? D CYS 31 ? B CYS 31 ? 1_555 120.4 ? 15 SG ? D CYS 28 ? B CYS 28 ? 1_555 CD ? G CD . ? B CD 67 ? 1_555 SG ? D CYS 31 ? B CYS 31 ? 1_555 105.3 ? 16 SG ? D CYS 11 ? B CYS 11 ? 1_555 CD ? G CD . ? B CD 67 ? 1_555 SG ? D CYS 38 ? B CYS 38 ? 1_555 114.4 ? 17 SG ? D CYS 28 ? B CYS 28 ? 1_555 CD ? G CD . ? B CD 67 ? 1_555 SG ? D CYS 38 ? B CYS 38 ? 1_555 109.0 ? 18 SG ? D CYS 31 ? B CYS 31 ? 1_555 CD ? G CD . ? B CD 67 ? 1_555 SG ? D CYS 38 ? B CYS 38 ? 1_555 112.4 ? 19 SG ? D CYS 11 ? B CYS 11 ? 1_555 CD ? H CD . ? B CD 68 ? 1_555 SG ? D CYS 14 ? B CYS 14 ? 1_555 100.8 ? 20 SG ? D CYS 11 ? B CYS 11 ? 1_555 CD ? H CD . ? B CD 68 ? 1_555 SG ? D CYS 21 ? B CYS 21 ? 1_555 109.4 ? 21 SG ? D CYS 14 ? B CYS 14 ? 1_555 CD ? H CD . ? B CD 68 ? 1_555 SG ? D CYS 21 ? B CYS 21 ? 1_555 119.5 ? 22 SG ? D CYS 11 ? B CYS 11 ? 1_555 CD ? H CD . ? B CD 68 ? 1_555 SG ? D CYS 28 ? B CYS 28 ? 1_555 94.5 ? 23 SG ? D CYS 14 ? B CYS 14 ? 1_555 CD ? H CD . ? B CD 68 ? 1_555 SG ? D CYS 28 ? B CYS 28 ? 1_555 123.5 ? 24 SG ? D CYS 21 ? B CYS 21 ? 1_555 CD ? H CD . ? B CD 68 ? 1_555 SG ? D CYS 28 ? B CYS 28 ? 1_555 105.2 ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 LYS 25 C . ? LYS 25 A PRO 26 C ? PRO 26 A 1 29.14 2 LYS 25 D . ? LYS 25 B PRO 26 D ? PRO 26 B 1 6.02 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software B CD 67 ? 5 'BINDING SITE FOR RESIDUE CD B 67' AC2 Software B CD 68 ? 5 'BINDING SITE FOR RESIDUE CD B 68' AC3 Software A CD 67 ? 5 'BINDING SITE FOR RESIDUE CD A 67' AC4 Software A CD 68 ? 5 'BINDING SITE FOR RESIDUE CD A 68' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 CYS D 11 ? CYS B 11 . ? 1_555 ? 2 AC1 5 CYS D 28 ? CYS B 28 . ? 1_555 ? 3 AC1 5 CYS D 31 ? CYS B 31 . ? 1_555 ? 4 AC1 5 CYS D 38 ? CYS B 38 . ? 1_555 ? 5 AC1 5 CD H . ? CD B 68 . ? 1_555 ? 6 AC2 5 CYS D 11 ? CYS B 11 . ? 1_555 ? 7 AC2 5 CYS D 14 ? CYS B 14 . ? 1_555 ? 8 AC2 5 CYS D 21 ? CYS B 21 . ? 1_555 ? 9 AC2 5 CYS D 28 ? CYS B 28 . ? 1_555 ? 10 AC2 5 CD G . ? CD B 67 . ? 1_555 ? 11 AC3 5 CYS C 11 ? CYS A 11 . ? 1_555 ? 12 AC3 5 CYS C 28 ? CYS A 28 . ? 1_555 ? 13 AC3 5 CYS C 31 ? CYS A 31 . ? 1_555 ? 14 AC3 5 CYS C 38 ? CYS A 38 . ? 1_555 ? 15 AC3 5 CD F . ? CD A 68 . ? 1_555 ? 16 AC4 5 CYS C 11 ? CYS A 11 . ? 1_555 ? 17 AC4 5 CYS C 14 ? CYS A 14 . ? 1_555 ? 18 AC4 5 CYS C 21 ? CYS A 21 . ? 1_555 ? 19 AC4 5 CYS C 28 ? CYS A 28 . ? 1_555 ? 20 AC4 5 CD E . ? CD A 67 . ? 1_555 ? # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "C5'" D DC 1 ? ? "C4'" D DC 1 ? ? 1.602 1.512 0.090 0.007 N 2 1 N1 D DT 15 ? ? C2 D DT 15 ? ? 1.438 1.376 0.062 0.008 N 3 1 C4 D DT 15 ? ? C5 D DT 15 ? ? 1.500 1.445 0.055 0.009 N 4 1 C6 D DT 15 ? ? N1 D DT 15 ? ? 1.432 1.378 0.054 0.007 N 5 1 C5 D DT 15 ? ? C7 D DT 15 ? ? 1.540 1.496 0.044 0.006 N 6 1 "C5'" D DG 18 ? ? "C4'" D DG 18 ? ? 1.585 1.512 0.073 0.007 N 7 1 P E DG 22 ? ? "O5'" E DG 22 ? ? 1.653 1.593 0.060 0.010 N 8 1 "C5'" E DG 23 ? ? "C4'" E DG 23 ? ? 1.555 1.512 0.043 0.007 N 9 1 "C5'" E DA 24 ? ? "C4'" E DA 24 ? ? 1.566 1.512 0.054 0.007 N 10 1 "O3'" E DG 25 ? ? P E DG 26 ? ? 1.533 1.607 -0.074 0.012 Y 11 1 "O3'" E DG 26 ? ? "C3'" E DG 26 ? ? 1.375 1.419 -0.044 0.006 N 12 1 P E DT 29 ? ? "O5'" E DT 29 ? ? 1.527 1.593 -0.066 0.010 N 13 1 "C2'" E DT 29 ? ? "C1'" E DT 29 ? ? 1.452 1.518 -0.066 0.010 N 14 1 C6 E DT 29 ? ? N1 E DT 29 ? ? 1.332 1.378 -0.046 0.007 N 15 1 C6 E DT 34 ? ? N1 E DT 34 ? ? 1.428 1.378 0.050 0.007 N 16 1 NE2 B HIS 53 ? ? CD2 B HIS 53 ? ? 1.306 1.373 -0.067 0.011 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" D DC 1 ? ? "C1'" D DC 1 ? ? N1 D DC 1 ? ? 110.71 108.30 2.41 0.30 N 2 1 N1 D DC 1 ? ? C2 D DC 1 ? ? O2 D DC 1 ? ? 122.57 118.90 3.67 0.60 N 3 1 "O4'" D DC 2 ? ? "C1'" D DC 2 ? ? "C2'" D DC 2 ? ? 99.36 105.90 -6.54 0.80 N 4 1 "O4'" D DC 2 ? ? "C1'" D DC 2 ? ? N1 D DC 2 ? ? 113.10 108.30 4.80 0.30 N 5 1 N1 D DC 2 ? ? C2 D DC 2 ? ? O2 D DC 2 ? ? 122.82 118.90 3.92 0.60 N 6 1 "O4'" D DG 4 ? ? "C1'" D DG 4 ? ? "C2'" D DG 4 ? ? 98.47 105.90 -7.43 0.80 N 7 1 "O4'" D DG 4 ? ? "C1'" D DG 4 ? ? N9 D DG 4 ? ? 113.74 108.30 5.44 0.30 N 8 1 "O4'" D DA 5 ? ? "C1'" D DA 5 ? ? "C2'" D DA 5 ? ? 98.66 105.90 -7.24 0.80 N 9 1 "O4'" D DG 6 ? ? "C1'" D DG 6 ? ? "C2'" D DG 6 ? ? 99.66 105.90 -6.24 0.80 N 10 1 "O4'" D DG 6 ? ? "C1'" D DG 6 ? ? N9 D DG 6 ? ? 114.59 108.30 6.29 0.30 N 11 1 C8 D DG 6 ? ? N9 D DG 6 ? ? C4 D DG 6 ? ? 103.97 106.40 -2.43 0.40 N 12 1 "O4'" D DC 9 ? ? "C1'" D DC 9 ? ? "C2'" D DC 9 ? ? 98.56 105.90 -7.34 0.80 N 13 1 "O4'" D DC 9 ? ? "C1'" D DC 9 ? ? N1 D DC 9 ? ? 112.42 108.30 4.12 0.30 N 14 1 N1 D DC 9 ? ? C2 D DC 9 ? ? O2 D DC 9 ? ? 124.31 118.90 5.41 0.60 N 15 1 N3 D DC 9 ? ? C2 D DC 9 ? ? O2 D DC 9 ? ? 117.42 121.90 -4.48 0.70 N 16 1 "C3'" D DC 9 ? ? "O3'" D DC 9 ? ? P D DA 10 ? ? 127.88 119.70 8.18 1.20 Y 17 1 N1 D DA 10 ? ? C6 D DA 10 ? ? N6 D DA 10 ? ? 122.82 118.60 4.22 0.60 N 18 1 "C1'" D DG 11 ? ? "O4'" D DG 11 ? ? "C4'" D DG 11 ? ? 104.05 110.10 -6.05 1.00 N 19 1 "O4'" D DG 11 ? ? "C1'" D DG 11 ? ? N9 D DG 11 ? ? 113.80 108.30 5.50 0.30 N 20 1 "C3'" D DG 11 ? ? "O3'" D DG 11 ? ? P D DT 12 ? ? 129.16 119.70 9.46 1.20 Y 21 1 "O4'" D DT 12 ? ? "C1'" D DT 12 ? ? "C2'" D DT 12 ? ? 98.88 105.90 -7.02 0.80 N 22 1 C4 D DT 12 ? ? C5 D DT 12 ? ? C6 D DT 12 ? ? 122.19 118.00 4.19 0.60 N 23 1 N3 D DT 12 ? ? C2 D DT 12 ? ? O2 D DT 12 ? ? 116.77 122.30 -5.53 0.60 N 24 1 C5 D DT 12 ? ? C4 D DT 12 ? ? O4 D DT 12 ? ? 130.44 124.90 5.54 0.70 N 25 1 C4 D DT 12 ? ? C5 D DT 12 ? ? C7 D DT 12 ? ? 123.47 119.00 4.47 0.60 N 26 1 C6 D DT 12 ? ? C5 D DT 12 ? ? C7 D DT 12 ? ? 114.28 122.90 -8.62 0.60 N 27 1 "C3'" D DT 12 ? ? "O3'" D DT 12 ? ? P D DC 13 ? ? 132.11 119.70 12.41 1.20 Y 28 1 "O4'" D DC 13 ? ? "C1'" D DC 13 ? ? "C2'" D DC 13 ? ? 98.59 105.90 -7.31 0.80 N 29 1 N1 D DC 13 ? ? C2 D DC 13 ? ? O2 D DC 13 ? ? 123.89 118.90 4.99 0.60 N 30 1 N3 D DC 13 ? ? C2 D DC 13 ? ? O2 D DC 13 ? ? 117.61 121.90 -4.29 0.70 N 31 1 P D DC 14 ? ? "O5'" D DC 14 ? ? "C5'" D DC 14 ? ? 108.02 120.90 -12.88 1.60 N 32 1 "C4'" D DC 14 ? ? "C3'" D DC 14 ? ? "C2'" D DC 14 ? ? 94.38 102.20 -7.82 0.70 N 33 1 "C3'" D DC 14 ? ? "C2'" D DC 14 ? ? "C1'" D DC 14 ? ? 110.14 102.50 7.64 1.20 N 34 1 "O4'" D DC 14 ? ? "C1'" D DC 14 ? ? "C2'" D DC 14 ? ? 89.80 105.90 -16.10 0.80 N 35 1 "O4'" D DC 14 ? ? "C1'" D DC 14 ? ? N1 D DC 14 ? ? 115.55 108.30 7.25 0.30 N 36 1 C2 D DC 14 ? ? N3 D DC 14 ? ? C4 D DC 14 ? ? 122.98 119.90 3.08 0.50 N 37 1 "C4'" D DT 15 ? ? "C3'" D DT 15 ? ? "C2'" D DT 15 ? ? 96.98 102.20 -5.22 0.70 N 38 1 "O4'" D DT 15 ? ? "C1'" D DT 15 ? ? "C2'" D DT 15 ? ? 96.89 105.90 -9.01 0.80 N 39 1 "O4'" D DT 15 ? ? "C1'" D DT 15 ? ? N1 D DT 15 ? ? 114.18 108.30 5.88 0.30 N 40 1 N3 D DT 15 ? ? C2 D DT 15 ? ? O2 D DT 15 ? ? 117.18 122.30 -5.12 0.60 N 41 1 "C3'" D DT 15 ? ? "O3'" D DT 15 ? ? P D DC 16 ? ? 131.80 119.70 12.10 1.20 Y 42 1 "O4'" D DC 16 ? ? "C1'" D DC 16 ? ? "C2'" D DC 16 ? ? 99.54 105.90 -6.36 0.80 N 43 1 "O4'" D DC 17 ? ? "C1'" D DC 17 ? ? "C2'" D DC 17 ? ? 99.63 105.90 -6.27 0.80 N 44 1 "O4'" D DG 18 ? ? "C1'" D DG 18 ? ? N9 D DG 18 ? ? 113.51 108.30 5.21 0.30 N 45 1 "O4'" D DG 19 ? ? "C1'" D DG 19 ? ? "C2'" D DG 19 ? ? 100.85 105.90 -5.05 0.80 N 46 1 "O4'" E DC 20 ? ? "C1'" E DC 20 ? ? N1 E DC 20 ? ? 110.55 108.30 2.25 0.30 N 47 1 "O4'" E DC 21 ? ? "C1'" E DC 21 ? ? "C2'" E DC 21 ? ? 100.70 105.90 -5.20 0.80 N 48 1 P E DG 22 ? ? "O5'" E DG 22 ? ? "C5'" E DG 22 ? ? 131.66 120.90 10.76 1.60 N 49 1 "O4'" E DG 22 ? ? "C1'" E DG 22 ? ? N9 E DG 22 ? ? 103.61 108.00 -4.39 0.70 N 50 1 "O4'" E DG 23 ? ? "C1'" E DG 23 ? ? "C2'" E DG 23 ? ? 98.55 105.90 -7.35 0.80 N 51 1 "O4'" E DG 23 ? ? "C1'" E DG 23 ? ? N9 E DG 23 ? ? 112.18 108.30 3.88 0.30 N 52 1 "C3'" E DG 25 ? ? "C2'" E DG 25 ? ? "C1'" E DG 25 ? ? 94.83 102.40 -7.57 0.80 N 53 1 "O4'" E DG 25 ? ? "C1'" E DG 25 ? ? N9 E DG 25 ? ? 111.20 108.30 2.90 0.30 N 54 1 N1 E DG 25 ? ? C2 E DG 25 ? ? N3 E DG 25 ? ? 119.86 123.90 -4.04 0.60 N 55 1 N1 E DG 25 ? ? C2 E DG 25 ? ? N2 E DG 25 ? ? 124.75 116.20 8.55 0.90 N 56 1 N3 E DG 25 ? ? C2 E DG 25 ? ? N2 E DG 25 ? ? 115.32 119.90 -4.58 0.70 N 57 1 C5 E DG 25 ? ? C6 E DG 25 ? ? O6 E DG 25 ? ? 124.07 128.60 -4.53 0.60 N 58 1 C8 E DG 25 ? ? N9 E DG 25 ? ? "C1'" E DG 25 ? ? 137.30 127.00 10.30 1.30 N 59 1 C4 E DG 25 ? ? N9 E DG 25 ? ? "C1'" E DG 25 ? ? 115.56 126.50 -10.94 1.30 N 60 1 "O4'" E DC 28 ? ? "C1'" E DC 28 ? ? N1 E DC 28 ? ? 110.71 108.30 2.41 0.30 N 61 1 N1 E DC 28 ? ? C2 E DC 28 ? ? O2 E DC 28 ? ? 122.51 118.90 3.61 0.60 N 62 1 C4 E DT 29 ? ? C5 E DT 29 ? ? C6 E DT 29 ? ? 122.43 118.00 4.43 0.60 N 63 1 C5 E DT 29 ? ? C6 E DT 29 ? ? N1 E DT 29 ? ? 119.52 123.70 -4.18 0.60 N 64 1 C6 E DT 29 ? ? C5 E DT 29 ? ? C7 E DT 29 ? ? 118.30 122.90 -4.60 0.60 N 65 1 "C1'" E DG 30 ? ? "O4'" E DG 30 ? ? "C4'" E DG 30 ? ? 103.50 110.10 -6.60 1.00 N 66 1 "O4'" E DG 30 ? ? "C1'" E DG 30 ? ? N9 E DG 30 ? ? 113.34 108.30 5.04 0.30 N 67 1 "C3'" E DG 30 ? ? "O3'" E DG 30 ? ? P E DT 31 ? ? 136.59 119.70 16.89 1.20 Y 68 1 "O5'" E DT 31 ? ? P E DT 31 ? ? OP1 E DT 31 ? ? 99.12 105.70 -6.58 0.90 N 69 1 C4 E DT 31 ? ? C5 E DT 31 ? ? C6 E DT 31 ? ? 121.86 118.00 3.86 0.60 N 70 1 N3 E DT 31 ? ? C2 E DT 31 ? ? O2 E DT 31 ? ? 117.72 122.30 -4.58 0.60 N 71 1 C6 E DT 31 ? ? C5 E DT 31 ? ? C7 E DT 31 ? ? 119.12 122.90 -3.78 0.60 N 72 1 "O4'" E DC 32 ? ? "C4'" E DC 32 ? ? "C3'" E DC 32 ? ? 110.44 106.00 4.44 0.60 N 73 1 "C4'" E DC 32 ? ? "C3'" E DC 32 ? ? "C2'" E DC 32 ? ? 94.95 102.20 -7.25 0.70 N 74 1 "O4'" E DC 32 ? ? "C1'" E DC 32 ? ? "C2'" E DC 32 ? ? 96.96 105.90 -8.94 0.80 N 75 1 "O4'" E DC 32 ? ? "C1'" E DC 32 ? ? N1 E DC 32 ? ? 103.36 108.00 -4.64 0.70 N 76 1 "C3'" E DC 32 ? ? "O3'" E DC 32 ? ? P E DC 33 ? ? 128.88 119.70 9.18 1.20 Y 77 1 "C4'" E DC 33 ? ? "C3'" E DC 33 ? ? "C2'" E DC 33 ? ? 95.61 102.20 -6.59 0.70 N 78 1 "C3'" E DC 33 ? ? "C2'" E DC 33 ? ? "C1'" E DC 33 ? ? 111.14 102.50 8.64 1.20 N 79 1 "O4'" E DC 33 ? ? "C1'" E DC 33 ? ? "C2'" E DC 33 ? ? 96.91 105.90 -8.99 0.80 N 80 1 "O4'" E DC 33 ? ? "C1'" E DC 33 ? ? N1 E DC 33 ? ? 115.65 108.30 7.35 0.30 N 81 1 "C1'" E DT 34 ? ? "O4'" E DT 34 ? ? "C4'" E DT 34 ? ? 114.53 110.30 4.23 0.70 N 82 1 "O4'" E DT 34 ? ? "C1'" E DT 34 ? ? "C2'" E DT 34 ? ? 94.43 105.90 -11.47 0.80 N 83 1 "O4'" E DC 35 ? ? "C1'" E DC 35 ? ? "C2'" E DC 35 ? ? 101.01 105.90 -4.89 0.80 N 84 1 "O4'" E DC 35 ? ? "C1'" E DC 35 ? ? N1 E DC 35 ? ? 113.61 108.30 5.31 0.30 N 85 1 "O4'" E DC 36 ? ? "C1'" E DC 36 ? ? "C2'" E DC 36 ? ? 98.47 105.90 -7.43 0.80 N 86 1 "O4'" E DC 36 ? ? "C1'" E DC 36 ? ? N1 E DC 36 ? ? 111.57 108.30 3.27 0.30 N 87 1 "O4'" E DG 38 ? ? "C1'" E DG 38 ? ? N9 E DG 38 ? ? 110.30 108.30 2.00 0.30 N 88 1 CA A CYS 31 ? ? CB A CYS 31 ? ? SG A CYS 31 ? ? 124.01 114.20 9.81 1.10 N 89 1 CD1 A TRP 36 ? ? CG A TRP 36 ? ? CD2 A TRP 36 ? ? 112.09 106.30 5.79 0.80 N 90 1 CE2 A TRP 36 ? ? CD2 A TRP 36 ? ? CG A TRP 36 ? ? 102.42 107.30 -4.88 0.80 N 91 1 NE A ARG 39 ? ? CZ A ARG 39 ? ? NH2 A ARG 39 ? ? 116.95 120.30 -3.35 0.50 N 92 1 NE A ARG 60 ? ? CZ A ARG 60 ? ? NH2 A ARG 60 ? ? 117.30 120.30 -3.00 0.50 N 93 1 CA B CYS 11 ? ? CB B CYS 11 ? ? SG B CYS 11 ? ? 122.67 114.20 8.47 1.10 N 94 1 CD1 B TRP 36 ? ? CG B TRP 36 ? ? CD2 B TRP 36 ? ? 112.45 106.30 6.15 0.80 N 95 1 CE2 B TRP 36 ? ? CD2 B TRP 36 ? ? CG B TRP 36 ? ? 101.63 107.30 -5.67 0.80 N 96 1 NE B ARG 39 ? ? CZ B ARG 39 ? ? NH2 B ARG 39 ? ? 116.19 120.30 -4.11 0.50 N 97 1 NE B ARG 46 ? ? CZ B ARG 46 ? ? NH2 B ARG 46 ? ? 117.19 120.30 -3.11 0.50 N 98 1 CA B VAL 57 ? ? C B VAL 57 ? ? N B GLU 58 ? ? 133.58 117.20 16.38 2.20 Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 23 ? ? 83.26 12.54 2 1 GLU A 56 ? ? -58.15 -70.82 3 1 ARG A 63 ? ? 172.62 -37.05 4 1 LYS B 23 ? ? 54.89 13.86 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DT D 12 ? ? 0.075 'SIDE CHAIN' 2 1 DT D 15 ? ? 0.071 'SIDE CHAIN' 3 1 DG D 18 ? ? 0.051 'SIDE CHAIN' 4 1 DG E 37 ? ? 0.050 'SIDE CHAIN' 5 1 DG E 38 ? ? 0.072 'SIDE CHAIN' 6 1 TYR B 40 ? ? 0.065 'SIDE CHAIN' # _pdbx_entry_details.entry_id 1D66 _pdbx_entry_details.compound_details ;RESIDUES LEU A 19 - LYS A 27 AND LEU B 19 - LYS B 27 FORM TIGHT TURNS WHICH CONNECT HELICES. RESIDUES TRP A 39 - LEU A 49 AND TRP B 39 - LEU B 49 FORM EXTENDED CHAINS WHICH CONNECT HELICES. ; _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? C MET 1 2 1 Y 1 A LYS 2 ? C LYS 2 3 1 Y 1 A LEU 3 ? C LEU 3 4 1 Y 1 A LEU 4 ? C LEU 4 5 1 Y 1 A SER 5 ? C SER 5 6 1 Y 1 A SER 6 ? C SER 6 7 1 Y 1 A ILE 7 ? C ILE 7 8 1 Y 1 A GLU 65 ? C GLU 65 9 1 Y 1 A PHE 66 ? C PHE 66 10 1 Y 1 B MET 1 ? D MET 1 11 1 Y 1 B LYS 2 ? D LYS 2 12 1 Y 1 B LEU 3 ? D LEU 3 13 1 Y 1 B LEU 4 ? D LEU 4 14 1 Y 1 B SER 5 ? D SER 5 15 1 Y 1 B SER 6 ? D SER 6 16 1 Y 1 B ILE 7 ? D ILE 7 17 1 Y 1 B GLU 65 ? D GLU 65 18 1 Y 1 B PHE 66 ? D PHE 66 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CD CD CD N N 74 CYS N N N N 75 CYS CA C N R 76 CYS C C N N 77 CYS O O N N 78 CYS CB C N N 79 CYS SG S N N 80 CYS OXT O N N 81 CYS H H N N 82 CYS H2 H N N 83 CYS HA H N N 84 CYS HB2 H N N 85 CYS HB3 H N N 86 CYS HG H N N 87 CYS HXT H N N 88 DA OP3 O N N 89 DA P P N N 90 DA OP1 O N N 91 DA OP2 O N N 92 DA "O5'" O N N 93 DA "C5'" C N N 94 DA "C4'" C N R 95 DA "O4'" O N N 96 DA "C3'" C N S 97 DA "O3'" O N N 98 DA "C2'" C N N 99 DA "C1'" C N R 100 DA N9 N Y N 101 DA C8 C Y N 102 DA N7 N Y N 103 DA C5 C Y N 104 DA C6 C Y N 105 DA N6 N N N 106 DA N1 N Y N 107 DA C2 C Y N 108 DA N3 N Y N 109 DA C4 C Y N 110 DA HOP3 H N N 111 DA HOP2 H N N 112 DA "H5'" H N N 113 DA "H5''" H N N 114 DA "H4'" H N N 115 DA "H3'" H N N 116 DA "HO3'" H N N 117 DA "H2'" H N N 118 DA "H2''" H N N 119 DA "H1'" H N N 120 DA H8 H N N 121 DA H61 H N N 122 DA H62 H N N 123 DA H2 H N N 124 DC OP3 O N N 125 DC P P N N 126 DC OP1 O N N 127 DC OP2 O N N 128 DC "O5'" O N N 129 DC "C5'" C N N 130 DC "C4'" C N R 131 DC "O4'" O N N 132 DC "C3'" C N S 133 DC "O3'" O N N 134 DC "C2'" C N N 135 DC "C1'" C N R 136 DC N1 N N N 137 DC C2 C N N 138 DC O2 O N N 139 DC N3 N N N 140 DC C4 C N N 141 DC N4 N N N 142 DC C5 C N N 143 DC C6 C N N 144 DC HOP3 H N N 145 DC HOP2 H N N 146 DC "H5'" H N N 147 DC "H5''" H N N 148 DC "H4'" H N N 149 DC "H3'" H N N 150 DC "HO3'" H N N 151 DC "H2'" H N N 152 DC "H2''" H N N 153 DC "H1'" H N N 154 DC H41 H N N 155 DC H42 H N N 156 DC H5 H N N 157 DC H6 H N N 158 DG OP3 O N N 159 DG P P N N 160 DG OP1 O N N 161 DG OP2 O N N 162 DG "O5'" O N N 163 DG "C5'" C N N 164 DG "C4'" C N R 165 DG "O4'" O N N 166 DG "C3'" C N S 167 DG "O3'" O N N 168 DG "C2'" C N N 169 DG "C1'" C N R 170 DG N9 N Y N 171 DG C8 C Y N 172 DG N7 N Y N 173 DG C5 C Y N 174 DG C6 C N N 175 DG O6 O N N 176 DG N1 N N N 177 DG C2 C N N 178 DG N2 N N N 179 DG N3 N N N 180 DG C4 C Y N 181 DG HOP3 H N N 182 DG HOP2 H N N 183 DG "H5'" H N N 184 DG "H5''" H N N 185 DG "H4'" H N N 186 DG "H3'" H N N 187 DG "HO3'" H N N 188 DG "H2'" H N N 189 DG "H2''" H N N 190 DG "H1'" H N N 191 DG H8 H N N 192 DG H1 H N N 193 DG H21 H N N 194 DG H22 H N N 195 DT OP3 O N N 196 DT P P N N 197 DT OP1 O N N 198 DT OP2 O N N 199 DT "O5'" O N N 200 DT "C5'" C N N 201 DT "C4'" C N R 202 DT "O4'" O N N 203 DT "C3'" C N S 204 DT "O3'" O N N 205 DT "C2'" C N N 206 DT "C1'" C N R 207 DT N1 N N N 208 DT C2 C N N 209 DT O2 O N N 210 DT N3 N N N 211 DT C4 C N N 212 DT O4 O N N 213 DT C5 C N N 214 DT C7 C N N 215 DT C6 C N N 216 DT HOP3 H N N 217 DT HOP2 H N N 218 DT "H5'" H N N 219 DT "H5''" H N N 220 DT "H4'" H N N 221 DT "H3'" H N N 222 DT "HO3'" H N N 223 DT "H2'" H N N 224 DT "H2''" H N N 225 DT "H1'" H N N 226 DT H3 H N N 227 DT H71 H N N 228 DT H72 H N N 229 DT H73 H N N 230 DT H6 H N N 231 GLN N N N N 232 GLN CA C N S 233 GLN C C N N 234 GLN O O N N 235 GLN CB C N N 236 GLN CG C N N 237 GLN CD C N N 238 GLN OE1 O N N 239 GLN NE2 N N N 240 GLN OXT O N N 241 GLN H H N N 242 GLN H2 H N N 243 GLN HA H N N 244 GLN HB2 H N N 245 GLN HB3 H N N 246 GLN HG2 H N N 247 GLN HG3 H N N 248 GLN HE21 H N N 249 GLN HE22 H N N 250 GLN HXT H N N 251 GLU N N N N 252 GLU CA C N S 253 GLU C C N N 254 GLU O O N N 255 GLU CB C N N 256 GLU CG C N N 257 GLU CD C N N 258 GLU OE1 O N N 259 GLU OE2 O N N 260 GLU OXT O N N 261 GLU H H N N 262 GLU H2 H N N 263 GLU HA H N N 264 GLU HB2 H N N 265 GLU HB3 H N N 266 GLU HG2 H N N 267 GLU HG3 H N N 268 GLU HE2 H N N 269 GLU HXT H N N 270 HIS N N N N 271 HIS CA C N S 272 HIS C C N N 273 HIS O O N N 274 HIS CB C N N 275 HIS CG C Y N 276 HIS ND1 N Y N 277 HIS CD2 C Y N 278 HIS CE1 C Y N 279 HIS NE2 N Y N 280 HIS OXT O N N 281 HIS H H N N 282 HIS H2 H N N 283 HIS HA H N N 284 HIS HB2 H N N 285 HIS HB3 H N N 286 HIS HD1 H N N 287 HIS HD2 H N N 288 HIS HE1 H N N 289 HIS HE2 H N N 290 HIS HXT H N N 291 HOH O O N N 292 HOH H1 H N N 293 HOH H2 H N N 294 ILE N N N N 295 ILE CA C N S 296 ILE C C N N 297 ILE O O N N 298 ILE CB C N S 299 ILE CG1 C N N 300 ILE CG2 C N N 301 ILE CD1 C N N 302 ILE OXT O N N 303 ILE H H N N 304 ILE H2 H N N 305 ILE HA H N N 306 ILE HB H N N 307 ILE HG12 H N N 308 ILE HG13 H N N 309 ILE HG21 H N N 310 ILE HG22 H N N 311 ILE HG23 H N N 312 ILE HD11 H N N 313 ILE HD12 H N N 314 ILE HD13 H N N 315 ILE HXT H N N 316 LEU N N N N 317 LEU CA C N S 318 LEU C C N N 319 LEU O O N N 320 LEU CB C N N 321 LEU CG C N N 322 LEU CD1 C N N 323 LEU CD2 C N N 324 LEU OXT O N N 325 LEU H H N N 326 LEU H2 H N N 327 LEU HA H N N 328 LEU HB2 H N N 329 LEU HB3 H N N 330 LEU HG H N N 331 LEU HD11 H N N 332 LEU HD12 H N N 333 LEU HD13 H N N 334 LEU HD21 H N N 335 LEU HD22 H N N 336 LEU HD23 H N N 337 LEU HXT H N N 338 LYS N N N N 339 LYS CA C N S 340 LYS C C N N 341 LYS O O N N 342 LYS CB C N N 343 LYS CG C N N 344 LYS CD C N N 345 LYS CE C N N 346 LYS NZ N N N 347 LYS OXT O N N 348 LYS H H N N 349 LYS H2 H N N 350 LYS HA H N N 351 LYS HB2 H N N 352 LYS HB3 H N N 353 LYS HG2 H N N 354 LYS HG3 H N N 355 LYS HD2 H N N 356 LYS HD3 H N N 357 LYS HE2 H N N 358 LYS HE3 H N N 359 LYS HZ1 H N N 360 LYS HZ2 H N N 361 LYS HZ3 H N N 362 LYS HXT H N N 363 MET N N N N 364 MET CA C N S 365 MET C C N N 366 MET O O N N 367 MET CB C N N 368 MET CG C N N 369 MET SD S N N 370 MET CE C N N 371 MET OXT O N N 372 MET H H N N 373 MET H2 H N N 374 MET HA H N N 375 MET HB2 H N N 376 MET HB3 H N N 377 MET HG2 H N N 378 MET HG3 H N N 379 MET HE1 H N N 380 MET HE2 H N N 381 MET HE3 H N N 382 MET HXT H N N 383 PHE N N N N 384 PHE CA C N S 385 PHE C C N N 386 PHE O O N N 387 PHE CB C N N 388 PHE CG C Y N 389 PHE CD1 C Y N 390 PHE CD2 C Y N 391 PHE CE1 C Y N 392 PHE CE2 C Y N 393 PHE CZ C Y N 394 PHE OXT O N N 395 PHE H H N N 396 PHE H2 H N N 397 PHE HA H N N 398 PHE HB2 H N N 399 PHE HB3 H N N 400 PHE HD1 H N N 401 PHE HD2 H N N 402 PHE HE1 H N N 403 PHE HE2 H N N 404 PHE HZ H N N 405 PHE HXT H N N 406 PRO N N N N 407 PRO CA C N S 408 PRO C C N N 409 PRO O O N N 410 PRO CB C N N 411 PRO CG C N N 412 PRO CD C N N 413 PRO OXT O N N 414 PRO H H N N 415 PRO HA H N N 416 PRO HB2 H N N 417 PRO HB3 H N N 418 PRO HG2 H N N 419 PRO HG3 H N N 420 PRO HD2 H N N 421 PRO HD3 H N N 422 PRO HXT H N N 423 SER N N N N 424 SER CA C N S 425 SER C C N N 426 SER O O N N 427 SER CB C N N 428 SER OG O N N 429 SER OXT O N N 430 SER H H N N 431 SER H2 H N N 432 SER HA H N N 433 SER HB2 H N N 434 SER HB3 H N N 435 SER HG H N N 436 SER HXT H N N 437 THR N N N N 438 THR CA C N S 439 THR C C N N 440 THR O O N N 441 THR CB C N R 442 THR OG1 O N N 443 THR CG2 C N N 444 THR OXT O N N 445 THR H H N N 446 THR H2 H N N 447 THR HA H N N 448 THR HB H N N 449 THR HG1 H N N 450 THR HG21 H N N 451 THR HG22 H N N 452 THR HG23 H N N 453 THR HXT H N N 454 TRP N N N N 455 TRP CA C N S 456 TRP C C N N 457 TRP O O N N 458 TRP CB C N N 459 TRP CG C Y N 460 TRP CD1 C Y N 461 TRP CD2 C Y N 462 TRP NE1 N Y N 463 TRP CE2 C Y N 464 TRP CE3 C Y N 465 TRP CZ2 C Y N 466 TRP CZ3 C Y N 467 TRP CH2 C Y N 468 TRP OXT O N N 469 TRP H H N N 470 TRP H2 H N N 471 TRP HA H N N 472 TRP HB2 H N N 473 TRP HB3 H N N 474 TRP HD1 H N N 475 TRP HE1 H N N 476 TRP HE3 H N N 477 TRP HZ2 H N N 478 TRP HZ3 H N N 479 TRP HH2 H N N 480 TRP HXT H N N 481 TYR N N N N 482 TYR CA C N S 483 TYR C C N N 484 TYR O O N N 485 TYR CB C N N 486 TYR CG C Y N 487 TYR CD1 C Y N 488 TYR CD2 C Y N 489 TYR CE1 C Y N 490 TYR CE2 C Y N 491 TYR CZ C Y N 492 TYR OH O N N 493 TYR OXT O N N 494 TYR H H N N 495 TYR H2 H N N 496 TYR HA H N N 497 TYR HB2 H N N 498 TYR HB3 H N N 499 TYR HD1 H N N 500 TYR HD2 H N N 501 TYR HE1 H N N 502 TYR HE2 H N N 503 TYR HH H N N 504 TYR HXT H N N 505 VAL N N N N 506 VAL CA C N S 507 VAL C C N N 508 VAL O O N N 509 VAL CB C N N 510 VAL CG1 C N N 511 VAL CG2 C N N 512 VAL OXT O N N 513 VAL H H N N 514 VAL H2 H N N 515 VAL HA H N N 516 VAL HB H N N 517 VAL HG11 H N N 518 VAL HG12 H N N 519 VAL HG13 H N N 520 VAL HG21 H N N 521 VAL HG22 H N N 522 VAL HG23 H N N 523 VAL HXT H N N 524 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLU N CA sing N N 251 GLU N H sing N N 252 GLU N H2 sing N N 253 GLU CA C sing N N 254 GLU CA CB sing N N 255 GLU CA HA sing N N 256 GLU C O doub N N 257 GLU C OXT sing N N 258 GLU CB CG sing N N 259 GLU CB HB2 sing N N 260 GLU CB HB3 sing N N 261 GLU CG CD sing N N 262 GLU CG HG2 sing N N 263 GLU CG HG3 sing N N 264 GLU CD OE1 doub N N 265 GLU CD OE2 sing N N 266 GLU OE2 HE2 sing N N 267 GLU OXT HXT sing N N 268 HIS N CA sing N N 269 HIS N H sing N N 270 HIS N H2 sing N N 271 HIS CA C sing N N 272 HIS CA CB sing N N 273 HIS CA HA sing N N 274 HIS C O doub N N 275 HIS C OXT sing N N 276 HIS CB CG sing N N 277 HIS CB HB2 sing N N 278 HIS CB HB3 sing N N 279 HIS CG ND1 sing Y N 280 HIS CG CD2 doub Y N 281 HIS ND1 CE1 doub Y N 282 HIS ND1 HD1 sing N N 283 HIS CD2 NE2 sing Y N 284 HIS CD2 HD2 sing N N 285 HIS CE1 NE2 sing Y N 286 HIS CE1 HE1 sing N N 287 HIS NE2 HE2 sing N N 288 HIS OXT HXT sing N N 289 HOH O H1 sing N N 290 HOH O H2 sing N N 291 ILE N CA sing N N 292 ILE N H sing N N 293 ILE N H2 sing N N 294 ILE CA C sing N N 295 ILE CA CB sing N N 296 ILE CA HA sing N N 297 ILE C O doub N N 298 ILE C OXT sing N N 299 ILE CB CG1 sing N N 300 ILE CB CG2 sing N N 301 ILE CB HB sing N N 302 ILE CG1 CD1 sing N N 303 ILE CG1 HG12 sing N N 304 ILE CG1 HG13 sing N N 305 ILE CG2 HG21 sing N N 306 ILE CG2 HG22 sing N N 307 ILE CG2 HG23 sing N N 308 ILE CD1 HD11 sing N N 309 ILE CD1 HD12 sing N N 310 ILE CD1 HD13 sing N N 311 ILE OXT HXT sing N N 312 LEU N CA sing N N 313 LEU N H sing N N 314 LEU N H2 sing N N 315 LEU CA C sing N N 316 LEU CA CB sing N N 317 LEU CA HA sing N N 318 LEU C O doub N N 319 LEU C OXT sing N N 320 LEU CB CG sing N N 321 LEU CB HB2 sing N N 322 LEU CB HB3 sing N N 323 LEU CG CD1 sing N N 324 LEU CG CD2 sing N N 325 LEU CG HG sing N N 326 LEU CD1 HD11 sing N N 327 LEU CD1 HD12 sing N N 328 LEU CD1 HD13 sing N N 329 LEU CD2 HD21 sing N N 330 LEU CD2 HD22 sing N N 331 LEU CD2 HD23 sing N N 332 LEU OXT HXT sing N N 333 LYS N CA sing N N 334 LYS N H sing N N 335 LYS N H2 sing N N 336 LYS CA C sing N N 337 LYS CA CB sing N N 338 LYS CA HA sing N N 339 LYS C O doub N N 340 LYS C OXT sing N N 341 LYS CB CG sing N N 342 LYS CB HB2 sing N N 343 LYS CB HB3 sing N N 344 LYS CG CD sing N N 345 LYS CG HG2 sing N N 346 LYS CG HG3 sing N N 347 LYS CD CE sing N N 348 LYS CD HD2 sing N N 349 LYS CD HD3 sing N N 350 LYS CE NZ sing N N 351 LYS CE HE2 sing N N 352 LYS CE HE3 sing N N 353 LYS NZ HZ1 sing N N 354 LYS NZ HZ2 sing N N 355 LYS NZ HZ3 sing N N 356 LYS OXT HXT sing N N 357 MET N CA sing N N 358 MET N H sing N N 359 MET N H2 sing N N 360 MET CA C sing N N 361 MET CA CB sing N N 362 MET CA HA sing N N 363 MET C O doub N N 364 MET C OXT sing N N 365 MET CB CG sing N N 366 MET CB HB2 sing N N 367 MET CB HB3 sing N N 368 MET CG SD sing N N 369 MET CG HG2 sing N N 370 MET CG HG3 sing N N 371 MET SD CE sing N N 372 MET CE HE1 sing N N 373 MET CE HE2 sing N N 374 MET CE HE3 sing N N 375 MET OXT HXT sing N N 376 PHE N CA sing N N 377 PHE N H sing N N 378 PHE N H2 sing N N 379 PHE CA C sing N N 380 PHE CA CB sing N N 381 PHE CA HA sing N N 382 PHE C O doub N N 383 PHE C OXT sing N N 384 PHE CB CG sing N N 385 PHE CB HB2 sing N N 386 PHE CB HB3 sing N N 387 PHE CG CD1 doub Y N 388 PHE CG CD2 sing Y N 389 PHE CD1 CE1 sing Y N 390 PHE CD1 HD1 sing N N 391 PHE CD2 CE2 doub Y N 392 PHE CD2 HD2 sing N N 393 PHE CE1 CZ doub Y N 394 PHE CE1 HE1 sing N N 395 PHE CE2 CZ sing Y N 396 PHE CE2 HE2 sing N N 397 PHE CZ HZ sing N N 398 PHE OXT HXT sing N N 399 PRO N CA sing N N 400 PRO N CD sing N N 401 PRO N H sing N N 402 PRO CA C sing N N 403 PRO CA CB sing N N 404 PRO CA HA sing N N 405 PRO C O doub N N 406 PRO C OXT sing N N 407 PRO CB CG sing N N 408 PRO CB HB2 sing N N 409 PRO CB HB3 sing N N 410 PRO CG CD sing N N 411 PRO CG HG2 sing N N 412 PRO CG HG3 sing N N 413 PRO CD HD2 sing N N 414 PRO CD HD3 sing N N 415 PRO OXT HXT sing N N 416 SER N CA sing N N 417 SER N H sing N N 418 SER N H2 sing N N 419 SER CA C sing N N 420 SER CA CB sing N N 421 SER CA HA sing N N 422 SER C O doub N N 423 SER C OXT sing N N 424 SER CB OG sing N N 425 SER CB HB2 sing N N 426 SER CB HB3 sing N N 427 SER OG HG sing N N 428 SER OXT HXT sing N N 429 THR N CA sing N N 430 THR N H sing N N 431 THR N H2 sing N N 432 THR CA C sing N N 433 THR CA CB sing N N 434 THR CA HA sing N N 435 THR C O doub N N 436 THR C OXT sing N N 437 THR CB OG1 sing N N 438 THR CB CG2 sing N N 439 THR CB HB sing N N 440 THR OG1 HG1 sing N N 441 THR CG2 HG21 sing N N 442 THR CG2 HG22 sing N N 443 THR CG2 HG23 sing N N 444 THR OXT HXT sing N N 445 TRP N CA sing N N 446 TRP N H sing N N 447 TRP N H2 sing N N 448 TRP CA C sing N N 449 TRP CA CB sing N N 450 TRP CA HA sing N N 451 TRP C O doub N N 452 TRP C OXT sing N N 453 TRP CB CG sing N N 454 TRP CB HB2 sing N N 455 TRP CB HB3 sing N N 456 TRP CG CD1 doub Y N 457 TRP CG CD2 sing Y N 458 TRP CD1 NE1 sing Y N 459 TRP CD1 HD1 sing N N 460 TRP CD2 CE2 doub Y N 461 TRP CD2 CE3 sing Y N 462 TRP NE1 CE2 sing Y N 463 TRP NE1 HE1 sing N N 464 TRP CE2 CZ2 sing Y N 465 TRP CE3 CZ3 doub Y N 466 TRP CE3 HE3 sing N N 467 TRP CZ2 CH2 doub Y N 468 TRP CZ2 HZ2 sing N N 469 TRP CZ3 CH2 sing Y N 470 TRP CZ3 HZ3 sing N N 471 TRP CH2 HH2 sing N N 472 TRP OXT HXT sing N N 473 TYR N CA sing N N 474 TYR N H sing N N 475 TYR N H2 sing N N 476 TYR CA C sing N N 477 TYR CA CB sing N N 478 TYR CA HA sing N N 479 TYR C O doub N N 480 TYR C OXT sing N N 481 TYR CB CG sing N N 482 TYR CB HB2 sing N N 483 TYR CB HB3 sing N N 484 TYR CG CD1 doub Y N 485 TYR CG CD2 sing Y N 486 TYR CD1 CE1 sing Y N 487 TYR CD1 HD1 sing N N 488 TYR CD2 CE2 doub Y N 489 TYR CD2 HD2 sing N N 490 TYR CE1 CZ doub Y N 491 TYR CE1 HE1 sing N N 492 TYR CE2 CZ sing Y N 493 TYR CE2 HE2 sing N N 494 TYR CZ OH sing N N 495 TYR OH HH sing N N 496 TYR OXT HXT sing N N 497 VAL N CA sing N N 498 VAL N H sing N N 499 VAL N H2 sing N N 500 VAL CA C sing N N 501 VAL CA CB sing N N 502 VAL CA HA sing N N 503 VAL C O doub N N 504 VAL C OXT sing N N 505 VAL CB CG1 sing N N 506 VAL CB CG2 sing N N 507 VAL CB HB sing N N 508 VAL CG1 HG11 sing N N 509 VAL CG1 HG12 sing N N 510 VAL CG1 HG13 sing N N 511 VAL CG2 HG21 sing N N 512 VAL CG2 HG22 sing N N 513 VAL CG2 HG23 sing N N 514 VAL OXT HXT sing N N 515 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1D66 'double helix' 1D66 'b-form double helix' 1D66 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 1 1_555 B DG 19 1_555 0.410 -0.532 1.005 -6.130 -8.411 -1.535 1 D_DC1:DG38_E D 1 ? E 38 ? 19 1 1 A DC 2 1_555 B DG 18 1_555 0.772 -0.366 0.230 2.040 -5.200 -0.723 2 D_DC2:DG37_E D 2 ? E 37 ? 19 1 1 A DG 3 1_555 B DC 17 1_555 0.108 -0.463 0.195 8.405 -19.302 -8.958 3 D_DG3:DC36_E D 3 ? E 36 ? 19 1 1 A DG 4 1_555 B DC 16 1_555 -0.461 -0.306 -0.088 3.563 -4.720 -1.201 4 D_DG4:DC35_E D 4 ? E 35 ? 19 1 1 A DG 6 1_555 B DC 14 1_555 0.209 -0.333 0.361 -1.192 -9.786 0.327 5 D_DG6:DC33_E D 6 ? E 33 ? 19 1 1 A DG 7 1_555 B DC 13 1_555 -0.311 -0.514 -0.372 3.954 -11.562 -5.337 6 D_DG7:DC32_E D 7 ? E 32 ? 19 1 1 A DA 8 1_555 B DT 12 1_555 0.601 -0.365 0.573 9.129 -17.006 2.161 7 D_DA8:DT31_E D 8 ? E 31 ? 20 1 1 A DC 9 1_555 B DG 11 1_555 0.806 -0.606 -0.143 6.322 -9.214 -7.278 8 D_DC9:DG30_E D 9 ? E 30 ? 19 1 1 A DA 10 1_555 B DT 10 1_555 0.645 -0.490 0.698 -1.058 -14.280 -12.613 9 D_DA10:DT29_E D 10 ? E 29 ? 20 1 1 A DG 11 1_555 B DC 9 1_555 0.101 4.901 0.456 -4.734 -10.108 -87.026 10 D_DG11:DC28_E D 11 ? E 28 ? ? ? 1 A DT 12 1_555 B DA 8 1_555 0.190 -0.167 0.253 -7.858 -15.016 1.670 11 D_DT12:DA27_E D 12 ? E 27 ? 20 1 1 A DC 13 1_555 B DG 7 1_555 1.114 -0.530 0.257 -12.864 -8.637 -4.443 12 D_DC13:DG26_E D 13 ? E 26 ? 19 1 1 A DC 14 1_555 B DG 6 1_555 1.203 -0.232 0.011 -0.784 -6.575 -32.605 13 D_DC14:DG25_E D 14 ? E 25 ? ? ? 1 A DT 15 1_555 B DA 5 1_555 0.700 -0.271 0.246 -3.786 -13.762 -1.016 14 D_DT15:DA24_E D 15 ? E 24 ? 20 1 1 A DC 16 1_555 B DG 4 1_555 -0.214 0.154 -0.216 -3.769 -1.052 9.058 15 D_DC16:DG23_E D 16 ? E 23 ? 19 1 1 A DC 17 1_555 B DG 3 1_555 0.142 -0.551 -0.099 3.182 -7.250 -5.336 16 D_DC17:DG22_E D 17 ? E 22 ? 19 1 1 A DG 18 1_555 B DC 2 1_555 -0.976 -0.187 0.699 2.010 -1.935 5.254 17 D_DG18:DC21_E D 18 ? E 21 ? 19 1 1 A DG 19 1_555 B DC 1 1_555 1.092 -0.275 -0.003 5.651 -4.062 -5.809 18 D_DG19:DC20_E D 19 ? E 20 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 1 1_555 B DG 19 1_555 A DC 2 1_555 B DG 18 1_555 0.916 0.648 3.459 11.131 -6.366 33.487 2.050 0.251 3.408 -10.579 -18.497 35.793 1 DD_DC1DC2:DG37DG38_EE D 1 ? E 38 ? D 2 ? E 37 ? 1 A DC 2 1_555 B DG 18 1_555 A DG 3 1_555 B DC 17 1_555 -1.261 1.124 3.259 -2.123 6.273 33.892 0.885 1.783 3.475 10.634 3.600 34.515 2 DD_DC2DG3:DC36DG37_EE D 2 ? E 37 ? D 3 ? E 36 ? 1 A DG 3 1_555 B DC 17 1_555 A DG 4 1_555 B DC 16 1_555 1.345 -0.317 3.516 5.316 -6.445 35.060 0.508 -1.333 3.674 -10.515 -8.673 36.011 3 DD_DG3DG4:DC35DC36_EE D 3 ? E 36 ? D 4 ? E 35 ? 1 A DG 4 1_555 B DC 16 1_555 A DG 6 1_555 B DC 14 1_555 -0.534 0.411 6.790 -11.297 10.151 73.148 -0.324 -0.297 6.802 8.430 9.381 74.492 4 DD_DG4DG6:DC33DC35_EE D 4 ? E 35 ? D 6 ? E 33 ? 1 A DG 6 1_555 B DC 14 1_555 A DG 7 1_555 B DC 13 1_555 0.161 -0.076 3.262 8.132 4.251 24.672 -1.315 1.843 3.101 9.538 -18.246 26.298 5 DD_DG6DG7:DC32DC33_EE D 6 ? E 33 ? D 7 ? E 32 ? 1 A DG 7 1_555 B DC 13 1_555 A DA 8 1_555 B DT 12 1_555 -0.408 1.192 3.111 -6.491 2.703 42.716 1.360 -0.063 3.203 3.681 8.840 43.264 6 DD_DG7DA8:DT31DC32_EE D 7 ? E 32 ? D 8 ? E 31 ? 1 A DA 8 1_555 B DT 12 1_555 A DC 9 1_555 B DG 11 1_555 0.122 -0.906 3.368 3.573 -7.674 38.358 -0.380 0.270 3.476 -11.508 -5.358 39.247 7 DD_DA8DC9:DG30DT31_EE D 8 ? E 31 ? D 9 ? E 30 ? 1 A DC 9 1_555 B DG 11 1_555 A DA 10 1_555 B DT 10 1_555 -0.679 -0.221 3.661 -1.418 2.681 33.974 -0.854 0.905 3.658 4.578 2.421 34.105 8 DD_DC9DA10:DT29DG30_EE D 9 ? E 30 ? D 10 ? E 29 ? 1 A DA 10 1_555 B DT 10 1_555 A DG 11 1_555 B DC 9 1_555 2.119 -2.643 2.951 3.777 -1.707 71.816 -2.198 -1.687 3.098 -1.454 -3.217 71.919 9 DD_DA10DG11:DC28DT29_EE D 10 ? E 29 ? D 11 ? E 28 ? 1 A DG 11 1_555 B DC 9 1_555 A DT 12 1_555 B DA 8 1_555 -0.831 1.509 3.645 1.336 0.379 -4.898 -20.082 1.560 3.613 -4.317 15.232 -5.091 10 DD_DG11DT12:DA27DC28_EE D 11 ? E 28 ? D 12 ? E 27 ? 1 A DT 12 1_555 B DA 8 1_555 A DC 13 1_555 B DG 7 1_555 0.211 0.537 3.442 1.079 0.687 40.095 0.700 -0.178 3.455 1.002 -1.574 40.114 11 DD_DT12DC13:DG26DA27_EE D 12 ? E 27 ? D 13 ? E 26 ? 1 A DC 13 1_555 B DG 7 1_555 A DC 14 1_555 B DG 6 1_555 -1.411 -0.559 3.111 -4.350 6.700 32.150 -2.070 1.770 3.094 11.871 7.707 33.102 12 DD_DC13DC14:DG25DG26_EE D 13 ? E 26 ? D 14 ? E 25 ? 1 A DC 14 1_555 B DG 6 1_555 A DT 15 1_555 B DA 5 1_555 1.603 -1.034 3.560 3.855 5.034 30.768 -2.944 -2.170 3.521 9.362 -7.171 31.399 13 DD_DC14DT15:DA24DG25_EE D 14 ? E 25 ? D 15 ? E 24 ? 1 A DT 15 1_555 B DA 5 1_555 A DC 16 1_555 B DG 4 1_555 1.285 0.687 3.184 9.302 3.827 33.924 0.545 -0.690 3.461 6.387 -15.523 35.342 14 DD_DT15DC16:DG23DA24_EE D 15 ? E 24 ? D 16 ? E 23 ? 1 A DC 16 1_555 B DG 4 1_555 A DC 17 1_555 B DG 3 1_555 -2.027 0.685 3.355 -4.663 -6.500 35.338 2.060 2.576 3.412 -10.541 7.563 36.204 15 DD_DC16DC17:DG22DG23_EE D 16 ? E 23 ? D 17 ? E 22 ? 1 A DC 17 1_555 B DG 3 1_555 A DG 18 1_555 B DC 2 1_555 1.976 0.783 3.370 1.243 3.202 30.888 0.814 -3.437 3.506 5.990 -2.325 31.074 16 DD_DC17DG18:DC21DG22_EE D 17 ? E 22 ? D 18 ? E 21 ? 1 A DG 18 1_555 B DC 2 1_555 A DG 19 1_555 B DC 1 1_555 -1.325 0.305 3.332 0.560 6.275 45.072 -0.171 1.765 3.328 8.139 -0.726 45.488 17 DD_DG18DG19:DC20DC21_EE D 18 ? E 21 ? D 19 ? E 20 ? # _atom_sites.entry_id 1D66 _atom_sites.fract_transf_matrix[1][1] 0.012369 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012369 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013569 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CD N O P S # loop_