HEADER TRANSFERASE 13-OCT-99 1D6J TITLE CRYSTAL STRUCTURE OF ADENOSINE 5'-PHOSPHOSULFATE (APS) KINASE FROM TITLE 2 PENICILLIUM CHRYSOGENUM COMPND MOL_ID: 1; COMPND 2 MOLECULE: ADENOSINE-5'PHOSPHOSULFATE KINASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: APS KINASE; COMPND 5 EC: 2.7.1.25; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PENICILLIUM CHRYSOGENUM; SOURCE 3 ORGANISM_TAXID: 5076; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_PLASMID: PET23A KEYWDS APS KINASE, ADENYLYLSULFATE KINASE, SULFATE, NUCLEOTIDE KINASE, KEYWDS 2 TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR I.J.MACRAE,I.H.SEGEL,A.J.FISHER REVDAT 3 07-FEB-24 1D6J 1 REMARK REVDAT 2 24-FEB-09 1D6J 1 VERSN REVDAT 1 23-FEB-00 1D6J 0 JRNL AUTH I.J.MACRAE,I.H.SEGEL,A.J.FISHER JRNL TITL CRYSTAL STRUCTURE OF ADENOSINE 5'-PHOSPHOSULFATE KINASE FROM JRNL TITL 2 PENICILLIUM CHRYSOGENUM. JRNL REF BIOCHEMISTRY V. 39 1613 2000 JRNL REFN ISSN 0006-2960 JRNL PMID 10677210 JRNL DOI 10.1021/BI9924157 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 0.9 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.49 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 2297291.570 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 31625 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.207 REMARK 3 FREE R VALUE : 0.249 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1537 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.006 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.13 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.40 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 4842 REMARK 3 BIN R VALUE (WORKING SET) : 0.2650 REMARK 3 BIN FREE R VALUE : 0.3190 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.20 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 266 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.020 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2798 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 10 REMARK 3 SOLVENT ATOMS : 198 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 34.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 45.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 6.24000 REMARK 3 B22 (A**2) : -11.66000 REMARK 3 B33 (A**2) : 5.42000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.24 REMARK 3 ESD FROM SIGMAA (A) : 0.20 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.30 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.26 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.018 REMARK 3 BOND ANGLES (DEGREES) : 1.800 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 22.70 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.280 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 4.410 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 5.650 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 5.980 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 7.440 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.36 REMARK 3 BSOL : 69.96 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER.PARAM REMARK 3 PARAMETER FILE 3 : TAR.PAR REMARK 3 PARAMETER FILE 4 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : TAR.TOP REMARK 3 TOPOLOGY FILE 3 : WATER.TOP REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1D6J COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-OCT-99. REMARK 100 THE DEPOSITION ID IS D_1000009835. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-FEB-99 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31625 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : 0.04300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 30.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.13 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.4 REMARK 200 DATA REDUNDANCY IN SHELL : 3.20 REMARK 200 R MERGE FOR SHELL (I) : 0.25000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHASES REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.85 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.45 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.0 M NA/K TARTRATE, O.1 M MES, PH REMARK 280 6.0, 0.5% POLYETHYLINIMINE, BATCH, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 70.97550 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 70.97550 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 39.43100 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 41.74200 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 39.43100 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 41.74200 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 70.97550 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 39.43100 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 41.74200 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 70.97550 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 39.43100 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 41.74200 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3730 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15610 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -12.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 THR A 3 REMARK 465 ASN A 4 REMARK 465 ILE A 5 REMARK 465 THR A 6 REMARK 465 PHE A 7 REMARK 465 VAL A 144 REMARK 465 ALA A 145 REMARK 465 GLU A 146 REMARK 465 GLN A 147 REMARK 465 ARG A 148 REMARK 465 ASP A 149 REMARK 465 PRO A 150 REMARK 465 LYS A 151 REMARK 465 GLY A 152 REMARK 465 LEU A 153 REMARK 465 TYR A 154 REMARK 465 LYS A 155 REMARK 465 LYS A 156 REMARK 465 ALA A 157 REMARK 465 ARG A 158 REMARK 465 GLU A 159 REMARK 465 GLY A 160 REMARK 465 VAL A 161 REMARK 465 ILE A 162 REMARK 465 LYS A 163 REMARK 465 GLU A 164 REMARK 465 PHE A 165 REMARK 465 THR A 166 REMARK 465 GLY A 167 REMARK 465 ILE A 168 REMARK 465 SER A 169 REMARK 465 GLU A 211 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 THR B 3 REMARK 465 ASN B 4 REMARK 465 ILE B 5 REMARK 465 THR B 6 REMARK 465 PHE B 7 REMARK 465 ASP B 149 REMARK 465 PRO B 150 REMARK 465 LYS B 151 REMARK 465 GLY B 152 REMARK 465 LEU B 153 REMARK 465 TYR B 154 REMARK 465 LYS B 155 REMARK 465 LYS B 156 REMARK 465 ALA B 157 REMARK 465 ARG B 158 REMARK 465 GLU B 159 REMARK 465 GLY B 160 REMARK 465 VAL B 161 REMARK 465 ILE B 162 REMARK 465 LYS B 163 REMARK 465 GLU B 164 REMARK 465 PHE B 165 REMARK 465 THR B 166 REMARK 465 GLY B 167 REMARK 465 ILE B 168 REMARK 465 SER B 169 REMARK 465 GLU B 211 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 54 CB CG CD NE CZ NH1 NH2 REMARK 470 GLU A 127 CG CD OE1 OE2 REMARK 470 GLU A 128 CG CD OE1 OE2 REMARK 470 GLU A 143 CG CD OE1 OE2 REMARK 470 GLN A 190 CG CD OE1 NE2 REMARK 470 LYS A 209 CG CD CE NZ REMARK 470 LYS A 210 CG CD CE NZ REMARK 470 HIS B 8 CG ND1 CD2 CE1 NE2 REMARK 470 ARG B 54 CB CG CD NE CZ NH1 NH2 REMARK 470 THR B 124 OG1 CG2 REMARK 470 GLU B 128 CG CD OE1 OE2 REMARK 470 GLN B 147 CG CD OE1 NE2 REMARK 470 GLU B 186 CG CD OE1 OE2 REMARK 470 LYS B 210 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 12 CA - CB - CG ANGL. DEV. = 16.0 DEGREES REMARK 500 ARG A 113 NE - CZ - NH2 ANGL. DEV. = -3.0 DEGREES REMARK 500 SER B 10 N - CA - C ANGL. DEV. = -19.2 DEGREES REMARK 500 ARG B 148 NE - CZ - NH2 ANGL. DEV. = 3.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 9 -70.75 -53.63 REMARK 500 SER A 107 75.60 -170.11 REMARK 500 PRO A 125 3.82 -59.66 REMARK 500 GLU A 127 -160.73 173.17 REMARK 500 ASN A 177 60.76 -150.27 REMARK 500 LEU B 12 105.69 68.32 REMARK 500 GLN B 23 154.85 171.15 REMARK 500 ARG B 51 -73.01 -69.37 REMARK 500 SER B 76 151.53 -40.52 REMARK 500 SER B 107 74.26 -156.69 REMARK 500 GLU B 128 30.55 -97.59 REMARK 500 GLU B 146 2.56 -55.26 REMARK 500 GLN B 147 39.83 -78.76 REMARK 500 GLU B 186 39.57 38.10 REMARK 500 LYS B 209 152.75 -49.32 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR A 109 0.06 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TLA A 212 DBREF 1D6J A 1 211 UNP Q12657 KAPS_PENCH 1 211 DBREF 1D6J B 1 211 UNP Q12657 KAPS_PENCH 1 211 SEQRES 1 A 211 MET SER THR ASN ILE THR PHE HIS ALA SER ALA LEU THR SEQRES 2 A 211 ARG SER GLU ARG THR GLU LEU ARG ASN GLN ARG GLY LEU SEQRES 3 A 211 THR ILE TRP LEU THR GLY LEU SER ALA SER GLY LYS SER SEQRES 4 A 211 THR LEU ALA VAL GLU LEU GLU HIS GLN LEU VAL ARG ASP SEQRES 5 A 211 ARG ARG VAL HIS ALA TYR ARG LEU ASP GLY ASP ASN ILE SEQRES 6 A 211 ARG PHE GLY LEU ASN LYS ASP LEU GLY PHE SER GLU ALA SEQRES 7 A 211 ASP ARG ASN GLU ASN ILE ARG ARG ILE ALA GLU VAL ALA SEQRES 8 A 211 LYS LEU PHE ALA ASP SER ASN SER ILE ALA ILE THR SER SEQRES 9 A 211 PHE ILE SER PRO TYR ARG LYS ASP ARG ASP THR ALA ARG SEQRES 10 A 211 GLN LEU HIS GLU VAL ALA THR PRO GLY GLU GLU THR GLY SEQRES 11 A 211 LEU PRO PHE VAL GLU VAL TYR VAL ASP VAL PRO VAL GLU SEQRES 12 A 211 VAL ALA GLU GLN ARG ASP PRO LYS GLY LEU TYR LYS LYS SEQRES 13 A 211 ALA ARG GLU GLY VAL ILE LYS GLU PHE THR GLY ILE SER SEQRES 14 A 211 ALA PRO TYR GLU ALA PRO ALA ASN PRO GLU VAL HIS VAL SEQRES 15 A 211 LYS ASN TYR GLU LEU PRO VAL GLN ASP ALA VAL LYS GLN SEQRES 16 A 211 ILE ILE ASP TYR LEU ASP THR LYS GLY TYR LEU PRO ALA SEQRES 17 A 211 LYS LYS GLU SEQRES 1 B 211 MET SER THR ASN ILE THR PHE HIS ALA SER ALA LEU THR SEQRES 2 B 211 ARG SER GLU ARG THR GLU LEU ARG ASN GLN ARG GLY LEU SEQRES 3 B 211 THR ILE TRP LEU THR GLY LEU SER ALA SER GLY LYS SER SEQRES 4 B 211 THR LEU ALA VAL GLU LEU GLU HIS GLN LEU VAL ARG ASP SEQRES 5 B 211 ARG ARG VAL HIS ALA TYR ARG LEU ASP GLY ASP ASN ILE SEQRES 6 B 211 ARG PHE GLY LEU ASN LYS ASP LEU GLY PHE SER GLU ALA SEQRES 7 B 211 ASP ARG ASN GLU ASN ILE ARG ARG ILE ALA GLU VAL ALA SEQRES 8 B 211 LYS LEU PHE ALA ASP SER ASN SER ILE ALA ILE THR SER SEQRES 9 B 211 PHE ILE SER PRO TYR ARG LYS ASP ARG ASP THR ALA ARG SEQRES 10 B 211 GLN LEU HIS GLU VAL ALA THR PRO GLY GLU GLU THR GLY SEQRES 11 B 211 LEU PRO PHE VAL GLU VAL TYR VAL ASP VAL PRO VAL GLU SEQRES 12 B 211 VAL ALA GLU GLN ARG ASP PRO LYS GLY LEU TYR LYS LYS SEQRES 13 B 211 ALA ARG GLU GLY VAL ILE LYS GLU PHE THR GLY ILE SER SEQRES 14 B 211 ALA PRO TYR GLU ALA PRO ALA ASN PRO GLU VAL HIS VAL SEQRES 15 B 211 LYS ASN TYR GLU LEU PRO VAL GLN ASP ALA VAL LYS GLN SEQRES 16 B 211 ILE ILE ASP TYR LEU ASP THR LYS GLY TYR LEU PRO ALA SEQRES 17 B 211 LYS LYS GLU HET TLA A 212 10 HETNAM TLA L(+)-TARTARIC ACID FORMUL 3 TLA C4 H6 O6 FORMUL 4 HOH *198(H2 O) HELIX 1 1 THR A 13 ASN A 22 1 10 HELIX 2 2 LEU A 33 SER A 36 5 4 HELIX 3 3 GLY A 37 ARG A 51 1 15 HELIX 4 4 ASP A 61 GLY A 68 1 8 HELIX 5 5 SER A 76 SER A 97 1 22 HELIX 6 6 TYR A 109 VAL A 122 1 14 HELIX 7 7 PRO A 188 LYS A 203 1 16 HELIX 8 8 THR B 13 ASN B 22 1 10 HELIX 9 9 GLY B 37 ARG B 51 1 15 HELIX 10 10 GLY B 62 PHE B 67 1 6 HELIX 11 11 SER B 76 SER B 97 1 22 HELIX 12 12 TYR B 109 VAL B 122 1 14 HELIX 13 13 PRO B 141 GLU B 146 1 6 HELIX 14 14 PRO B 188 LYS B 203 1 16 SHEET 1 A 5 ALA A 57 ARG A 59 0 SHEET 2 A 5 ILE A 100 THR A 103 1 O ILE A 100 N TYR A 58 SHEET 3 A 5 LEU A 26 THR A 31 1 O LEU A 26 N ALA A 101 SHEET 4 A 5 PHE A 133 ASP A 139 1 N VAL A 134 O THR A 27 SHEET 5 A 5 VAL A 180 LYS A 183 1 O VAL A 180 N TYR A 137 SHEET 1 B 5 ALA B 57 ARG B 59 0 SHEET 2 B 5 ILE B 100 THR B 103 1 O ILE B 100 N TYR B 58 SHEET 3 B 5 LEU B 26 THR B 31 1 O LEU B 26 N ALA B 101 SHEET 4 B 5 PHE B 133 ASP B 139 1 N VAL B 134 O THR B 27 SHEET 5 B 5 VAL B 180 LYS B 183 1 O VAL B 180 N TYR B 137 SITE 1 AC1 8 GLY A 62 ARG A 66 SER A 104 PHE A 105 SITE 2 AC1 8 ILE A 106 HOH A 282 HOH A 301 HOH A 302 CRYST1 78.862 83.484 141.951 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012680 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011978 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007045 0.00000