data_1D8R # _entry.id 1D8R # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.280 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1D8R RCSB RCSB009895 WWPDB D_1000009895 # _pdbx_database_PDB_obs_spr.id OBSLTE _pdbx_database_PDB_obs_spr.pdb_id 1VJ3 _pdbx_database_PDB_obs_spr.replace_pdb_id 1D8R _pdbx_database_PDB_obs_spr.date 2004-01-20 _pdbx_database_PDB_obs_spr.details ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 2cd2 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code OBS _pdbx_database_status.entry_id 1D8R _pdbx_database_status.recvd_initial_deposition_date 1999-10-25 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Cody, V.' 1 'Galitsky, N.' 2 'Rak, D.' 3 'Luft, J.R.' 4 'Queener, S.F.' 5 'Laughton, C.A.' 6 'Malcolm, F.G.' 7 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary ;Structural studies on bioactive compounds. 30. Crystal structure and molecular modeling studies on the Pneumocystis carinii dihydrofolate reductase cofactor complex with TAB, a highly selective antifolate. ; Biochemistry 39 3556 3564 2000 BICHAW US 0006-2960 0033 ? 10736154 10.1021/bi9924563 1 ;Ligand-Induced Conformational Changes in the Crystal Structures of Pneumocystis carinii Dihydrofolate Reductase Complexes with Folate and NADP+ ; Biochemistry 38 4303 4312 1999 BICHAW US 0006-2960 0033 ? ? 10.1021/bi982728m 2 'The Structure of Pneumocystis carinii Dihydrofolate Reductase to 1.9 A Resolution' 'Structure (London)' 2 915 924 1994 STRUE6 UK 0969-2126 2005 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Cody, V.' 1 primary 'Chan, D.' 2 primary 'Galitsky, N.' 3 primary 'Rak, D.' 4 primary 'Luft, J.R.' 5 primary 'Pangborn, W.' 6 primary 'Queener, S.F.' 7 primary 'Laughton, C.A.' 8 primary 'Stevens, M.F.' 9 1 'Cody, V.' 10 1 'Galitsky, N.' 11 1 'Rak, D.' 12 1 'Luft, J.R.' 13 1 'Pangborn, W.' 14 1 'Queener, S.F.' 15 2 'Champness, J.N.' 16 2 'Achari, A.' 17 2 'Ballantine, S.P.' 18 2 'Bryant, P.K.' 19 2 'Delves, C.J.' 20 2 'Stammers, D.K.' 21 # _cell.entry_id 1D8R _cell.length_a 37.481 _cell.length_b 43.137 _cell.length_c 61.288 _cell.angle_alpha 90.00 _cell.angle_beta 94.74 _cell.angle_gamma 90.00 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1D8R _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting monoclinic _symmetry.Int_Tables_number 4 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'PROTEIN (DIHYDROFOLATE REDUCTASE)' 23787.340 1 1.5.1.3 ? ? ? 2 non-polymer syn 'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 745.421 1 ? ? ? ? 3 non-polymer syn 'ACETIC ACID N-[2-CHLORO-5-[6-ETHYL-2,4-DIAMINO-PYRIMID-5-YL]-PHENYL]-[BENZYL-TRIAZEN-3-YL]ETHYL ESTER' 467.951 2 ? ? ? ? 4 water nat water 18.015 75 ? ? ? ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASN n 1 2 GLN n 1 3 GLN n 1 4 LYS n 1 5 SER n 1 6 LEU n 1 7 THR n 1 8 LEU n 1 9 ILE n 1 10 VAL n 1 11 ALA n 1 12 LEU n 1 13 THR n 1 14 THR n 1 15 SER n 1 16 TYR n 1 17 GLY n 1 18 ILE n 1 19 GLY n 1 20 ARG n 1 21 SER n 1 22 ASN n 1 23 SER n 1 24 LEU n 1 25 PRO n 1 26 TRP n 1 27 LYS n 1 28 LEU n 1 29 LYS n 1 30 LYS n 1 31 GLU n 1 32 ILE n 1 33 SER n 1 34 TYR n 1 35 PHE n 1 36 LYS n 1 37 ARG n 1 38 VAL n 1 39 THR n 1 40 SER n 1 41 PHE n 1 42 VAL n 1 43 PRO n 1 44 THR n 1 45 PHE n 1 46 ASP n 1 47 SER n 1 48 PHE n 1 49 GLU n 1 50 SER n 1 51 MET n 1 52 ASN n 1 53 VAL n 1 54 VAL n 1 55 LEU n 1 56 MET n 1 57 GLY n 1 58 ARG n 1 59 LYS n 1 60 THR n 1 61 TRP n 1 62 GLU n 1 63 SER n 1 64 ILE n 1 65 PRO n 1 66 LEU n 1 67 GLN n 1 68 PHE n 1 69 ARG n 1 70 PRO n 1 71 LEU n 1 72 LYS n 1 73 GLY n 1 74 ARG n 1 75 ILE n 1 76 ASN n 1 77 VAL n 1 78 VAL n 1 79 ILE n 1 80 THR n 1 81 ARG n 1 82 ASN n 1 83 GLU n 1 84 SER n 1 85 LEU n 1 86 ASP n 1 87 LEU n 1 88 GLY n 1 89 ASN n 1 90 GLY n 1 91 ILE n 1 92 HIS n 1 93 SER n 1 94 ALA n 1 95 LYS n 1 96 SER n 1 97 LEU n 1 98 ASP n 1 99 HIS n 1 100 ALA n 1 101 LEU n 1 102 GLU n 1 103 LEU n 1 104 LEU n 1 105 TYR n 1 106 ARG n 1 107 THR n 1 108 TYR n 1 109 GLY n 1 110 SER n 1 111 GLU n 1 112 SER n 1 113 SER n 1 114 VAL n 1 115 GLN n 1 116 ILE n 1 117 ASN n 1 118 ARG n 1 119 ILE n 1 120 PHE n 1 121 VAL n 1 122 ILE n 1 123 GLY n 1 124 GLY n 1 125 ALA n 1 126 GLN n 1 127 LEU n 1 128 TYR n 1 129 LYS n 1 130 ALA n 1 131 ALA n 1 132 MET n 1 133 ASP n 1 134 HIS n 1 135 PRO n 1 136 LYS n 1 137 LEU n 1 138 ASP n 1 139 ARG n 1 140 ILE n 1 141 MET n 1 142 ALA n 1 143 THR n 1 144 ILE n 1 145 ILE n 1 146 TYR n 1 147 LYS n 1 148 ASP n 1 149 ILE n 1 150 HIS n 1 151 CYS n 1 152 ASP n 1 153 VAL n 1 154 PHE n 1 155 PHE n 1 156 PRO n 1 157 LEU n 1 158 LYS n 1 159 PHE n 1 160 ARG n 1 161 ASP n 1 162 LYS n 1 163 GLU n 1 164 TRP n 1 165 SER n 1 166 SER n 1 167 VAL n 1 168 TRP n 1 169 LYS n 1 170 LYS n 1 171 GLU n 1 172 LYS n 1 173 HIS n 1 174 SER n 1 175 ASP n 1 176 LEU n 1 177 GLU n 1 178 SER n 1 179 TRP n 1 180 VAL n 1 181 GLY n 1 182 THR n 1 183 LYS n 1 184 VAL n 1 185 PRO n 1 186 HIS n 1 187 GLY n 1 188 LYS n 1 189 ILE n 1 190 ASN n 1 191 GLU n 1 192 ASP n 1 193 GLY n 1 194 PHE n 1 195 ASP n 1 196 TYR n 1 197 GLU n 1 198 PHE n 1 199 GLU n 1 200 MET n 1 201 TRP n 1 202 THR n 1 203 ARG n 1 204 ASP n 1 205 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'C-DNA P.CARINII DHFR' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'PNEUMOCYSTIS CARINII' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id ? _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name bacteria _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PT7-7 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name SWS _struct_ref.db_code DYR_PNECA _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1D8R _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 205 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P16184 _struct_ref_seq.db_align_beg 2 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 206 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 2 _struct_ref_seq.pdbx_auth_seq_align_end 206 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NDP non-polymer . 'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' ? 'C21 H30 N7 O17 P3' 745.421 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 TAB non-polymer . 'ACETIC ACID N-[2-CHLORO-5-[6-ETHYL-2,4-DIAMINO-PYRIMID-5-YL]-PHENYL]-[BENZYL-TRIAZEN-3-YL]ETHYL ESTER' ? 'C23 H26 Cl N7 O2' 467.951 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1D8R _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.97 _exptl_crystal.density_percent_sol 48.0 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'A novel thermal gradient technique' _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.pdbx_details ;10 ul of protein, 3 ul of MES/KCl buffer, 7 ul of 50%(w/v) PEG 2000 in 50 mM MES, 100 mM KCl, and placing the mixture in microcentrifuge tubes for equilibration on a thermal gradient apparatus. , pH 6.0, A novel thermal gradient technique ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 293 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IIC' _diffrn_detector.pdbx_collection_date 1998-02-01 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator GRAPH _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU 200' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1D8R _reflns.observed_criterion_sigma_I 1.0 _reflns.observed_criterion_sigma_F 2.0 _reflns.d_resolution_low 8.0 _reflns.d_resolution_high 2.1 _reflns.number_obs 10325 _reflns.number_all 11328 _reflns.percent_possible_obs 97.8 _reflns.pdbx_Rmerge_I_obs 0.064 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI 4.1 _reflns.B_iso_Wilson_estimate 16.7 _reflns.pdbx_redundancy 2.2 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_netI_over_sigmaI ? # _reflns_shell.d_res_high 2.10 _reflns_shell.d_res_low 2.18 _reflns_shell.percent_possible_all 96.9 _reflns_shell.Rmerge_I_obs 0.187 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy 3.1 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1105 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1D8R _refine.ls_number_reflns_obs 10325 _refine.ls_number_reflns_all 11328 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_d_res_low 8.0 _refine.ls_d_res_high 2.10 _refine.ls_percent_reflns_obs 97.8 _refine.ls_R_factor_obs 0.19 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean 24.34 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R_Free ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1678 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 81 _refine_hist.number_atoms_solvent 75 _refine_hist.number_atoms_total 1834 _refine_hist.d_res_high 2.10 _refine_hist.d_res_low 8.0 _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function p_bond_d 0.020 0.020 ? ? 'X-RAY DIFFRACTION' ? p_angle_d 0.065 0.040 ? ? 'X-RAY DIFFRACTION' ? p_planar_d 0.081 0.050 ? ? 'X-RAY DIFFRACTION' ? p_mcbond_it 1.564 1.750 ? ? 'X-RAY DIFFRACTION' ? p_mcangle_it 2.378 2.500 ? ? 'X-RAY DIFFRACTION' ? p_scbond_it 1.641 1.750 ? ? 'X-RAY DIFFRACTION' ? p_scangle_it 2.426 2.500 ? ? 'X-RAY DIFFRACTION' ? p_plane_restr 0.016 0.020 ? ? 'X-RAY DIFFRACTION' ? p_chiral_restr 0.228 0.150 ? ? 'X-RAY DIFFRACTION' ? p_singtor_nbd 0.229 0.500 ? ? 'X-RAY DIFFRACTION' ? p_multtor_nbd 0.313 0.500 ? ? 'X-RAY DIFFRACTION' ? p_xhyhbond_nbd 0.334 0.500 ? ? 'X-RAY DIFFRACTION' ? p_planar_tor 2.4 3.0 ? ? 'X-RAY DIFFRACTION' ? p_staggered_tor 23.6 15.0 ? ? 'X-RAY DIFFRACTION' ? p_orthonormal_tor 25.9 15.0 ? ? 'X-RAY DIFFRACTION' ? # _struct.entry_id 1D8R _struct.title ;STRUCTURAL STUDIES ON BIO-ACTIVE COMPOUNDS. CRYSTAL STRUCTURE AND MOLECULAR MODELING STUDIES ON THE PNEUMOCYSTIS CARINII DIHYDROFOLATE REDUCTASE COFACTOR COMPLEX WITH TAB, A HIGHLY SELECTIVE ANTIFOLATE. ; _struct.pdbx_descriptor 'DIHYDROFOLATE REDUCTASE (E.C.1.5.1.3)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1D8R _struct_keywords.pdbx_keywords OXIDOREDUCTASE _struct_keywords.text 'TAB, NADPH, MOLECULAR MODELING, OXIDOREDUCTASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LEU A 28 ? PHE A 41 ? LEU A 29 PHE A 42 1 ? 14 HELX_P HELX_P2 2 ARG A 58 ? ILE A 64 ? ARG A 59 ILE A 65 1 ? 7 HELX_P HELX_P3 3 PRO A 65 ? ARG A 69 ? PRO A 66 ARG A 70 5 ? 5 HELX_P HELX_P4 4 SER A 96 ? TYR A 108 ? SER A 97 TYR A 109 1 ? 13 HELX_P HELX_P5 5 GLY A 124 ? ASP A 133 ? GLY A 125 ASP A 134 1 ? 10 HELX_P HELX_P6 6 ASP A 161 ? SER A 165 ? ASP A 162 SER A 166 5 ? 5 HELX_P HELX_P7 7 LYS A 172 ? GLY A 181 ? LYS A 173 GLY A 182 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ARG 69 A . ? ARG 70 A PRO 70 A ? PRO 71 A 1 0.02 2 GLY 123 A . ? GLY 124 A GLY 124 A ? GLY 125 A 1 0.07 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 8 ? A1 ? 8 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel A1 1 2 ? parallel A1 2 3 ? parallel A1 3 4 ? parallel A1 4 5 ? parallel A1 5 6 ? parallel A1 6 7 ? anti-parallel A1 7 8 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 HIS A 92 ? ALA A 94 ? HIS A 93 ALA A 95 A 2 ARG A 74 ? ILE A 79 ? ARG A 75 ILE A 80 A 3 SER A 50 ? GLY A 57 ? SER A 51 GLY A 58 A 4 GLN A 115 ? VAL A 121 ? GLN A 116 VAL A 122 A 5 LEU A 6 ? THR A 13 ? LEU A 7 THR A 14 A 6 LEU A 137 ? ILE A 145 ? LEU A 138 ILE A 146 A 7 PHE A 194 ? THR A 202 ? PHE A 195 THR A 203 A 8 LYS A 169 ? LYS A 170 ? LYS A 170 LYS A 171 A1 1 HIS A 92 ? ALA A 94 ? HIS A 93 ALA A 95 A1 2 ARG A 74 ? ILE A 79 ? ARG A 75 ILE A 80 A1 3 SER A 50 ? GLY A 57 ? SER A 51 GLY A 58 A1 4 GLN A 115 ? VAL A 121 ? GLN A 116 VAL A 122 A1 5 LEU A 6 ? THR A 13 ? LEU A 7 THR A 14 A1 6 LEU A 137 ? ILE A 145 ? LEU A 138 ILE A 146 A1 7 PHE A 194 ? THR A 202 ? PHE A 195 THR A 203 A1 8 ILE A 189 ? GLU A 191 ? ILE A 190 GLU A 192 B 1 GLY A 17 ? GLY A 19 ? GLY A 18 GLY A 20 B 2 VAL A 153 ? PHE A 154 ? VAL A 154 PHE A 155 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N HIS A 92 ? N HIS A 93 O ASN A 76 ? O ASN A 77 A 2 3 N ILE A 75 ? N ILE A 76 O ASN A 52 ? O ASN A 53 A 3 4 N MET A 51 ? N MET A 52 O GLN A 115 ? O GLN A 116 A 4 5 N VAL A 121 ? N VAL A 122 O THR A 7 ? O THR A 8 A 5 6 O LEU A 6 ? O LEU A 7 N ASP A 138 ? N ASP A 139 A 6 7 N ILE A 144 ? N ILE A 145 O GLU A 197 ? O GLU A 198 A 7 8 N THR A 202 ? N THR A 203 O LYS A 169 ? O LYS A 170 A1 1 2 N HIS A 92 ? N HIS A 93 O ASN A 76 ? O ASN A 77 A1 2 3 N ILE A 75 ? N ILE A 76 O ASN A 52 ? O ASN A 53 A1 3 4 N MET A 51 ? N MET A 52 O GLN A 115 ? O GLN A 116 A1 4 5 N VAL A 121 ? N VAL A 122 O THR A 7 ? O THR A 8 A1 5 6 O LEU A 6 ? O LEU A 7 N ASP A 138 ? N ASP A 139 A1 6 7 N ILE A 144 ? N ILE A 145 O GLU A 197 ? O GLU A 198 A1 7 8 O TYR A 196 ? O TYR A 197 N ILE A 189 ? N ILE A 190 B 1 2 N ILE A 18 ? N ILE A 19 O VAL A 153 ? O VAL A 154 # _database_PDB_matrix.entry_id 1D8R _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1D8R _atom_sites.fract_transf_matrix[1][1] 0.026680 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.002212 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.023182 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.016372 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_sites_footnote.id _atom_sites_footnote.text 1 'CIS PROLINE - PRO 71 OMEGA = 0.02' 2 ;CIS GLYCINE - GLY 125 OMEGA = 0.07 PEPTIDE BOND DEVIATES SIGNIFICANTLY FROM TRANS CONFORMATION ; # loop_ _atom_type.symbol C CL N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASN 1 2 2 ASN ASN A . n A 1 2 GLN 2 3 3 GLN GLN A . n A 1 3 GLN 3 4 4 GLN GLN A . n A 1 4 LYS 4 5 5 LYS LYS A . n A 1 5 SER 5 6 6 SER SER A . n A 1 6 LEU 6 7 7 LEU LEU A . n A 1 7 THR 7 8 8 THR THR A . n A 1 8 LEU 8 9 9 LEU LEU A . n A 1 9 ILE 9 10 10 ILE ILE A . n A 1 10 VAL 10 11 11 VAL VAL A . n A 1 11 ALA 11 12 12 ALA ALA A . n A 1 12 LEU 12 13 13 LEU LEU A . n A 1 13 THR 13 14 14 THR THR A . n A 1 14 THR 14 15 15 THR THR A . n A 1 15 SER 15 16 16 SER SER A . n A 1 16 TYR 16 17 17 TYR TYR A . n A 1 17 GLY 17 18 18 GLY GLY A . n A 1 18 ILE 18 19 19 ILE ILE A . n A 1 19 GLY 19 20 20 GLY GLY A . n A 1 20 ARG 20 21 21 ARG ARG A . n A 1 21 SER 21 22 22 SER SER A . n A 1 22 ASN 22 23 23 ASN ASN A . n A 1 23 SER 23 24 24 SER SER A . n A 1 24 LEU 24 25 25 LEU LEU A . n A 1 25 PRO 25 26 26 PRO PRO A . n A 1 26 TRP 26 27 27 TRP TRP A . n A 1 27 LYS 27 28 28 LYS LYS A . n A 1 28 LEU 28 29 29 LEU LEU A . n A 1 29 LYS 29 30 30 LYS LYS A . n A 1 30 LYS 30 31 31 LYS LYS A . n A 1 31 GLU 31 32 32 GLU GLU A . n A 1 32 ILE 32 33 33 ILE ILE A . n A 1 33 SER 33 34 34 SER SER A . n A 1 34 TYR 34 35 35 TYR TYR A . n A 1 35 PHE 35 36 36 PHE PHE A . n A 1 36 LYS 36 37 37 LYS LYS A . n A 1 37 ARG 37 38 38 ARG ARG A . n A 1 38 VAL 38 39 39 VAL VAL A . n A 1 39 THR 39 40 40 THR THR A . n A 1 40 SER 40 41 41 SER SER A . n A 1 41 PHE 41 42 42 PHE PHE A . n A 1 42 VAL 42 43 43 VAL VAL A . n A 1 43 PRO 43 44 44 PRO PRO A . n A 1 44 THR 44 45 45 THR THR A . n A 1 45 PHE 45 46 46 PHE PHE A . n A 1 46 ASP 46 47 47 ASP ASP A . n A 1 47 SER 47 48 48 SER SER A . n A 1 48 PHE 48 49 49 PHE PHE A . n A 1 49 GLU 49 50 50 GLU GLU A . n A 1 50 SER 50 51 51 SER SER A . n A 1 51 MET 51 52 52 MET MET A . n A 1 52 ASN 52 53 53 ASN ASN A . n A 1 53 VAL 53 54 54 VAL VAL A . n A 1 54 VAL 54 55 55 VAL VAL A . n A 1 55 LEU 55 56 56 LEU LEU A . n A 1 56 MET 56 57 57 MET MET A . n A 1 57 GLY 57 58 58 GLY GLY A . n A 1 58 ARG 58 59 59 ARG ARG A . n A 1 59 LYS 59 60 60 LYS LYS A . n A 1 60 THR 60 61 61 THR THR A . n A 1 61 TRP 61 62 62 TRP TRP A . n A 1 62 GLU 62 63 63 GLU GLU A . n A 1 63 SER 63 64 64 SER SER A . n A 1 64 ILE 64 65 65 ILE ILE A . n A 1 65 PRO 65 66 66 PRO PRO A . n A 1 66 LEU 66 67 67 LEU LEU A . n A 1 67 GLN 67 68 68 GLN GLN A . n A 1 68 PHE 68 69 69 PHE PHE A . n A 1 69 ARG 69 70 70 ARG ARG A . n A 1 70 PRO 70 71 71 PRO PRO A . n A 1 71 LEU 71 72 72 LEU LEU A . n A 1 72 LYS 72 73 73 LYS LYS A . n A 1 73 GLY 73 74 74 GLY GLY A . n A 1 74 ARG 74 75 75 ARG ARG A . n A 1 75 ILE 75 76 76 ILE ILE A . n A 1 76 ASN 76 77 77 ASN ASN A . n A 1 77 VAL 77 78 78 VAL VAL A . n A 1 78 VAL 78 79 79 VAL VAL A . n A 1 79 ILE 79 80 80 ILE ILE A . n A 1 80 THR 80 81 81 THR THR A . n A 1 81 ARG 81 82 82 ARG ARG A . n A 1 82 ASN 82 83 83 ASN ASN A . n A 1 83 GLU 83 84 84 GLU GLU A . n A 1 84 SER 84 85 85 SER SER A . n A 1 85 LEU 85 86 86 LEU LEU A . n A 1 86 ASP 86 87 87 ASP ASP A . n A 1 87 LEU 87 88 88 LEU LEU A . n A 1 88 GLY 88 89 89 GLY GLY A . n A 1 89 ASN 89 90 90 ASN ASN A . n A 1 90 GLY 90 91 91 GLY GLY A . n A 1 91 ILE 91 92 92 ILE ILE A . n A 1 92 HIS 92 93 93 HIS HIS A . n A 1 93 SER 93 94 94 SER SER A . n A 1 94 ALA 94 95 95 ALA ALA A . n A 1 95 LYS 95 96 96 LYS LYS A . n A 1 96 SER 96 97 97 SER SER A . n A 1 97 LEU 97 98 98 LEU LEU A . n A 1 98 ASP 98 99 99 ASP ASP A . n A 1 99 HIS 99 100 100 HIS HIS A . n A 1 100 ALA 100 101 101 ALA ALA A . n A 1 101 LEU 101 102 102 LEU LEU A . n A 1 102 GLU 102 103 103 GLU GLU A . n A 1 103 LEU 103 104 104 LEU LEU A . n A 1 104 LEU 104 105 105 LEU LEU A . n A 1 105 TYR 105 106 106 TYR TYR A . n A 1 106 ARG 106 107 107 ARG ARG A . n A 1 107 THR 107 108 108 THR THR A . n A 1 108 TYR 108 109 109 TYR TYR A . n A 1 109 GLY 109 110 110 GLY GLY A . n A 1 110 SER 110 111 111 SER SER A . n A 1 111 GLU 111 112 112 GLU GLU A . n A 1 112 SER 112 113 113 SER SER A . n A 1 113 SER 113 114 114 SER SER A . n A 1 114 VAL 114 115 115 VAL VAL A . n A 1 115 GLN 115 116 116 GLN GLN A . n A 1 116 ILE 116 117 117 ILE ILE A . n A 1 117 ASN 117 118 118 ASN ASN A . n A 1 118 ARG 118 119 119 ARG ARG A . n A 1 119 ILE 119 120 120 ILE ILE A . n A 1 120 PHE 120 121 121 PHE PHE A . n A 1 121 VAL 121 122 122 VAL VAL A . n A 1 122 ILE 122 123 123 ILE ILE A . n A 1 123 GLY 123 124 124 GLY GLY A . n A 1 124 GLY 124 125 125 GLY GLY A . n A 1 125 ALA 125 126 126 ALA ALA A . n A 1 126 GLN 126 127 127 GLN GLN A . n A 1 127 LEU 127 128 128 LEU LEU A . n A 1 128 TYR 128 129 129 TYR TYR A . n A 1 129 LYS 129 130 130 LYS LYS A . n A 1 130 ALA 130 131 131 ALA ALA A . n A 1 131 ALA 131 132 132 ALA ALA A . n A 1 132 MET 132 133 133 MET MET A . n A 1 133 ASP 133 134 134 ASP ASP A . n A 1 134 HIS 134 135 135 HIS HIS A . n A 1 135 PRO 135 136 136 PRO PRO A . n A 1 136 LYS 136 137 137 LYS LYS A . n A 1 137 LEU 137 138 138 LEU LEU A . n A 1 138 ASP 138 139 139 ASP ASP A . n A 1 139 ARG 139 140 140 ARG ARG A . n A 1 140 ILE 140 141 141 ILE ILE A . n A 1 141 MET 141 142 142 MET MET A . n A 1 142 ALA 142 143 143 ALA ALA A . n A 1 143 THR 143 144 144 THR THR A . n A 1 144 ILE 144 145 145 ILE ILE A . n A 1 145 ILE 145 146 146 ILE ILE A . n A 1 146 TYR 146 147 147 TYR TYR A . n A 1 147 LYS 147 148 148 LYS LYS A . n A 1 148 ASP 148 149 149 ASP ASP A . n A 1 149 ILE 149 150 150 ILE ILE A . n A 1 150 HIS 150 151 151 HIS HIS A . n A 1 151 CYS 151 152 152 CYS CYS A . n A 1 152 ASP 152 153 153 ASP ASP A . n A 1 153 VAL 153 154 154 VAL VAL A . n A 1 154 PHE 154 155 155 PHE PHE A . n A 1 155 PHE 155 156 156 PHE PHE A . n A 1 156 PRO 156 157 157 PRO PRO A . n A 1 157 LEU 157 158 158 LEU LEU A . n A 1 158 LYS 158 159 159 LYS LYS A . n A 1 159 PHE 159 160 160 PHE PHE A . n A 1 160 ARG 160 161 161 ARG ARG A . n A 1 161 ASP 161 162 162 ASP ASP A . n A 1 162 LYS 162 163 163 LYS LYS A . n A 1 163 GLU 163 164 164 GLU GLU A . n A 1 164 TRP 164 165 165 TRP TRP A . n A 1 165 SER 165 166 166 SER SER A . n A 1 166 SER 166 167 167 SER SER A . n A 1 167 VAL 167 168 168 VAL VAL A . n A 1 168 TRP 168 169 169 TRP TRP A . n A 1 169 LYS 169 170 170 LYS LYS A . n A 1 170 LYS 170 171 171 LYS LYS A . n A 1 171 GLU 171 172 172 GLU GLU A . n A 1 172 LYS 172 173 173 LYS LYS A . n A 1 173 HIS 173 174 174 HIS HIS A . n A 1 174 SER 174 175 175 SER SER A . n A 1 175 ASP 175 176 176 ASP ASP A . n A 1 176 LEU 176 177 177 LEU LEU A . n A 1 177 GLU 177 178 178 GLU GLU A . n A 1 178 SER 178 179 179 SER SER A . n A 1 179 TRP 179 180 180 TRP TRP A . n A 1 180 VAL 180 181 181 VAL VAL A . n A 1 181 GLY 181 182 182 GLY GLY A . n A 1 182 THR 182 183 183 THR THR A . n A 1 183 LYS 183 184 184 LYS LYS A . n A 1 184 VAL 184 185 185 VAL VAL A . n A 1 185 PRO 185 186 186 PRO PRO A . n A 1 186 HIS 186 187 187 HIS HIS A . n A 1 187 GLY 187 188 188 GLY GLY A . n A 1 188 LYS 188 189 189 LYS LYS A . n A 1 189 ILE 189 190 190 ILE ILE A . n A 1 190 ASN 190 191 191 ASN ASN A . n A 1 191 GLU 191 192 192 GLU GLU A . n A 1 192 ASP 192 193 193 ASP ASP A . n A 1 193 GLY 193 194 194 GLY GLY A . n A 1 194 PHE 194 195 195 PHE PHE A . n A 1 195 ASP 195 196 196 ASP ASP A . n A 1 196 TYR 196 197 197 TYR TYR A . n A 1 197 GLU 197 198 198 GLU GLU A . n A 1 198 PHE 198 199 199 PHE PHE A . n A 1 199 GLU 199 200 200 GLU GLU A . n A 1 200 MET 200 201 201 MET MET A . n A 1 201 TRP 201 202 202 TRP TRP A . n A 1 202 THR 202 203 203 THR THR A . n A 1 203 ARG 203 204 204 ARG ARG A . n A 1 204 ASP 204 205 205 ASP ASP A . n A 1 205 LEU 205 206 206 LEU LEU A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NDP 1 207 -99999 NDP NDP ? . C 3 TAB 1 300 -99999 TAB TAB ? . D 3 TAB 1 301 -99999 TAB TAB ? . E 4 HOH 1 209 209 HOH HOH ? . E 4 HOH 2 210 210 HOH HOH ? . E 4 HOH 3 211 211 HOH HOH ? . E 4 HOH 4 212 212 HOH HOH ? . E 4 HOH 5 213 213 HOH HOH ? . E 4 HOH 6 214 214 HOH HOH ? . E 4 HOH 7 215 215 HOH HOH ? . E 4 HOH 8 216 216 HOH HOH ? . E 4 HOH 9 217 217 HOH HOH ? . E 4 HOH 10 218 218 HOH HOH ? . E 4 HOH 11 219 219 HOH HOH ? . E 4 HOH 12 220 220 HOH HOH ? . E 4 HOH 13 221 221 HOH HOH ? . E 4 HOH 14 222 222 HOH HOH ? . E 4 HOH 15 223 223 HOH HOH ? . E 4 HOH 16 224 224 HOH HOH ? . E 4 HOH 17 225 225 HOH HOH ? . E 4 HOH 18 226 226 HOH HOH ? . E 4 HOH 19 227 227 HOH HOH ? . E 4 HOH 20 228 228 HOH HOH ? . E 4 HOH 21 229 229 HOH HOH ? . E 4 HOH 22 230 230 HOH HOH ? . E 4 HOH 23 231 231 HOH HOH ? . E 4 HOH 24 232 232 HOH HOH ? . E 4 HOH 25 233 233 HOH HOH ? . E 4 HOH 26 234 234 HOH HOH ? . E 4 HOH 27 235 235 HOH HOH ? . E 4 HOH 28 236 236 HOH HOH ? . E 4 HOH 29 237 237 HOH HOH ? . E 4 HOH 30 238 238 HOH HOH ? . E 4 HOH 31 239 239 HOH HOH ? . E 4 HOH 32 240 240 HOH HOH ? . E 4 HOH 33 241 241 HOH HOH ? . E 4 HOH 34 242 242 HOH HOH ? . E 4 HOH 35 243 243 HOH HOH ? . E 4 HOH 36 244 244 HOH HOH ? . E 4 HOH 37 245 245 HOH HOH ? . E 4 HOH 38 246 246 HOH HOH ? . E 4 HOH 39 247 247 HOH HOH ? . E 4 HOH 40 248 248 HOH HOH ? . E 4 HOH 41 249 249 HOH HOH ? . E 4 HOH 42 250 250 HOH HOH ? . E 4 HOH 43 251 251 HOH HOH ? . E 4 HOH 44 252 252 HOH HOH ? . E 4 HOH 45 253 253 HOH HOH ? . E 4 HOH 46 254 254 HOH HOH ? . E 4 HOH 47 255 255 HOH HOH ? . E 4 HOH 48 256 256 HOH HOH ? . E 4 HOH 49 257 257 HOH HOH ? . E 4 HOH 50 258 258 HOH HOH ? . E 4 HOH 51 259 259 HOH HOH ? . E 4 HOH 52 260 260 HOH HOH ? . E 4 HOH 53 261 261 HOH HOH ? . E 4 HOH 54 262 262 HOH HOH ? . E 4 HOH 55 263 263 HOH HOH ? . E 4 HOH 56 264 264 HOH HOH ? . E 4 HOH 57 265 265 HOH HOH ? . E 4 HOH 58 266 266 HOH HOH ? . E 4 HOH 59 267 267 HOH HOH ? . E 4 HOH 60 268 268 HOH HOH ? . E 4 HOH 61 269 269 HOH HOH ? . E 4 HOH 62 270 270 HOH HOH ? . E 4 HOH 63 271 271 HOH HOH ? . E 4 HOH 64 272 272 HOH HOH ? . E 4 HOH 65 273 273 HOH HOH ? . E 4 HOH 66 274 274 HOH HOH ? . E 4 HOH 67 275 275 HOH HOH ? . E 4 HOH 68 276 276 HOH HOH ? . E 4 HOH 69 277 277 HOH HOH ? . E 4 HOH 70 278 278 HOH HOH ? . E 4 HOH 71 279 279 HOH HOH ? . E 4 HOH 72 280 280 HOH HOH ? . E 4 HOH 73 281 281 HOH HOH ? . E 4 HOH 74 282 282 HOH HOH ? . E 4 HOH 75 283 283 HOH HOH ? . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2000-10-25 2 'Structure model' 1 1 2004-01-20 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description 1 1 'Structure model' repository 'Initial release' ? 2 2 'Structure model' repository Obsolete ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DENZO 'data collection' . ? 1 R-AXIS 'data reduction' . ? 2 AMoRE 'model building' . ? 3 PROFFT refinement . ? 4 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OD2 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 ASP _pdbx_validate_close_contact.auth_seq_id_1 162 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 . _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 212 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.17 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CA A GLN 3 ? ? CB A GLN 3 ? ? CG A GLN 3 ? ? 132.19 113.40 18.79 2.20 N 2 1 CB A LEU 13 ? ? CG A LEU 13 ? ? CD1 A LEU 13 ? ? 133.64 111.00 22.64 1.70 N 3 1 N A SER 16 ? ? CA A SER 16 ? ? CB A SER 16 ? ? 100.71 110.50 -9.79 1.50 N 4 1 NE A ARG 21 ? ? CZ A ARG 21 ? ? NH1 A ARG 21 ? ? 126.14 120.30 5.84 0.50 N 5 1 NE A ARG 21 ? ? CZ A ARG 21 ? ? NH2 A ARG 21 ? ? 112.50 120.30 -7.80 0.50 N 6 1 CB A LEU 25 ? ? CA A LEU 25 ? ? C A LEU 25 ? ? 128.51 110.20 18.31 1.90 N 7 1 CB A TYR 35 ? ? CG A TYR 35 ? ? CD2 A TYR 35 ? ? 116.60 121.00 -4.40 0.60 N 8 1 CB A TYR 35 ? ? CG A TYR 35 ? ? CD1 A TYR 35 ? ? 126.32 121.00 5.32 0.60 N 9 1 CA A LYS 37 ? ? CB A LYS 37 ? ? CG A LYS 37 ? ? 128.81 113.40 15.41 2.20 N 10 1 CA A ARG 38 ? ? CB A ARG 38 ? ? CG A ARG 38 ? ? 138.22 113.40 24.82 2.20 N 11 1 CD A ARG 38 ? ? NE A ARG 38 ? ? CZ A ARG 38 ? ? 153.92 123.60 30.32 1.40 N 12 1 NH1 A ARG 38 ? ? CZ A ARG 38 ? ? NH2 A ARG 38 ? ? 107.65 119.40 -11.75 1.10 N 13 1 NE A ARG 38 ? ? CZ A ARG 38 ? ? NH2 A ARG 38 ? ? 130.90 120.30 10.60 0.50 N 14 1 CB A ASP 47 ? ? CG A ASP 47 ? ? OD2 A ASP 47 ? ? 112.77 118.30 -5.53 0.90 N 15 1 CG1 A VAL 54 ? ? CB A VAL 54 ? ? CG2 A VAL 54 ? ? 120.64 110.90 9.74 1.60 N 16 1 CA A ARG 59 ? ? CB A ARG 59 ? ? CG A ARG 59 ? ? 127.11 113.40 13.71 2.20 N 17 1 CA A GLU 63 ? ? CB A GLU 63 ? ? CG A GLU 63 ? ? 133.30 113.40 19.90 2.20 N 18 1 CB A GLU 63 ? ? CG A GLU 63 ? ? CD A GLU 63 ? ? 135.49 114.20 21.29 2.70 N 19 1 OE1 A GLU 63 ? ? CD A GLU 63 ? ? OE2 A GLU 63 ? ? 109.58 123.30 -13.72 1.20 N 20 1 NE A ARG 70 ? ? CZ A ARG 70 ? ? NH1 A ARG 70 ? ? 125.15 120.30 4.85 0.50 N 21 1 NE A ARG 75 ? ? CZ A ARG 75 ? ? NH1 A ARG 75 ? ? 126.45 120.30 6.15 0.50 N 22 1 NE A ARG 75 ? ? CZ A ARG 75 ? ? NH2 A ARG 75 ? ? 113.82 120.30 -6.48 0.50 N 23 1 CD A ARG 82 ? ? NE A ARG 82 ? ? CZ A ARG 82 ? ? 136.24 123.60 12.64 1.40 N 24 1 NE A ARG 82 ? ? CZ A ARG 82 ? ? NH1 A ARG 82 ? ? 126.59 120.30 6.29 0.50 N 25 1 NE A ARG 82 ? ? CZ A ARG 82 ? ? NH2 A ARG 82 ? ? 116.78 120.30 -3.52 0.50 N 26 1 CB A ASP 87 ? ? CG A ASP 87 ? ? OD1 A ASP 87 ? ? 130.98 118.30 12.68 0.90 N 27 1 OD1 A ASP 99 ? ? CG A ASP 99 ? ? OD2 A ASP 99 ? ? 143.02 123.30 19.72 1.90 N 28 1 CB A ASP 99 ? ? CG A ASP 99 ? ? OD2 A ASP 99 ? ? 101.98 118.30 -16.32 0.90 N 29 1 CB A ALA 101 ? ? CA A ALA 101 ? ? C A ALA 101 ? ? 120.35 110.10 10.25 1.50 N 30 1 CB A GLU 103 ? ? CG A GLU 103 ? ? CD A GLU 103 ? ? 131.16 114.20 16.96 2.70 N 31 1 CD A ARG 107 ? ? NE A ARG 107 ? ? CZ A ARG 107 ? ? 113.84 123.60 -9.76 1.40 N 32 1 NE A ARG 107 ? ? CZ A ARG 107 ? ? NH1 A ARG 107 ? ? 114.02 120.30 -6.28 0.50 N 33 1 NE A ARG 107 ? ? CZ A ARG 107 ? ? NH2 A ARG 107 ? ? 123.51 120.30 3.21 0.50 N 34 1 NE A ARG 119 ? ? CZ A ARG 119 ? ? NH2 A ARG 119 ? ? 112.55 120.30 -7.75 0.50 N 35 1 CB A ILE 123 ? ? CG1 A ILE 123 ? ? CD1 A ILE 123 ? ? 132.31 113.90 18.41 2.80 N 36 1 N A ALA 132 ? ? CA A ALA 132 ? ? CB A ALA 132 ? ? 100.17 110.10 -9.93 1.40 N 37 1 CB A ASP 134 ? ? CG A ASP 134 ? ? OD1 A ASP 134 ? ? 126.96 118.30 8.66 0.90 N 38 1 CB A ASP 134 ? ? CG A ASP 134 ? ? OD2 A ASP 134 ? ? 112.57 118.30 -5.73 0.90 N 39 1 CB A LEU 138 ? ? CA A LEU 138 ? ? C A LEU 138 ? ? 126.26 110.20 16.06 1.90 N 40 1 CB A ASP 139 ? ? CG A ASP 139 ? ? OD1 A ASP 139 ? ? 125.23 118.30 6.93 0.90 N 41 1 CB A ASP 139 ? ? CG A ASP 139 ? ? OD2 A ASP 139 ? ? 109.64 118.30 -8.66 0.90 N 42 1 NE A ARG 140 ? ? CZ A ARG 140 ? ? NH1 A ARG 140 ? ? 127.02 120.30 6.72 0.50 N 43 1 N A THR 144 ? ? CA A THR 144 ? ? CB A THR 144 ? ? 121.89 110.30 11.59 1.90 N 44 1 CB A ASP 153 ? ? CG A ASP 153 ? ? OD2 A ASP 153 ? ? 125.43 118.30 7.13 0.90 N 45 1 CA A VAL 168 ? ? CB A VAL 168 ? ? CG2 A VAL 168 ? ? 122.86 110.90 11.96 1.50 N 46 1 CB A ASP 176 ? ? CA A ASP 176 ? ? C A ASP 176 ? ? 124.12 110.40 13.72 2.00 N 47 1 CA A ASP 176 ? ? CB A ASP 176 ? ? CG A ASP 176 ? ? 134.79 113.40 21.39 2.20 N 48 1 CA A LEU 177 ? ? CB A LEU 177 ? ? CG A LEU 177 ? ? 129.85 115.30 14.55 2.30 N 49 1 CG A GLU 192 ? ? CD A GLU 192 ? ? OE2 A GLU 192 ? ? 105.76 118.30 -12.54 2.00 N 50 1 CA A PHE 195 ? ? CB A PHE 195 ? ? CG A PHE 195 ? ? 130.02 113.90 16.12 2.40 N 51 1 CG A GLU 200 ? ? CD A GLU 200 ? ? OE1 A GLU 200 ? ? 132.79 118.30 14.49 2.00 N 52 1 CD A ARG 204 ? ? NE A ARG 204 ? ? CZ A ARG 204 ? ? 179.61 123.60 56.01 1.40 N 53 1 NH1 A ARG 204 ? ? CZ A ARG 204 ? ? NH2 A ARG 204 ? ? 109.55 119.40 -9.85 1.10 N 54 1 NE A ARG 204 ? ? CZ A ARG 204 ? ? NH2 A ARG 204 ? ? 127.30 120.30 7.00 0.50 N 55 1 CB A ASP 205 ? ? CG A ASP 205 ? ? OD1 A ASP 205 ? ? 129.01 118.30 10.71 0.90 N 56 1 CB A ASP 205 ? ? CG A ASP 205 ? ? OD2 A ASP 205 ? ? 111.55 118.30 -6.75 0.90 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLN A 3 ? ? -30.20 154.26 2 1 GLN A 4 ? ? -145.79 -46.93 3 1 PRO A 26 ? ? -71.21 26.79 4 1 SER A 85 ? ? -90.66 -61.99 5 1 TYR A 109 ? ? -116.70 59.41 6 1 GLU A 112 ? ? -92.99 54.21 7 1 ASN A 118 ? ? -103.54 -83.46 8 1 LYS A 148 ? ? -177.13 139.67 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 N 1 . NDP 207 ? PA ? B NDP 1 PA 2 1 N 1 . NDP 207 ? O1A ? B NDP 1 O1A 3 1 N 1 . NDP 207 ? O2A ? B NDP 1 O2A 4 1 N 1 . NDP 207 ? O5B ? B NDP 1 O5B 5 1 N 1 . NDP 207 ? C5B ? B NDP 1 C5B 6 1 N 1 . NDP 207 ? C4B ? B NDP 1 C4B 7 1 N 1 . NDP 207 ? O4B ? B NDP 1 O4B 8 1 N 1 . NDP 207 ? C3B ? B NDP 1 C3B 9 1 N 1 . NDP 207 ? O3B ? B NDP 1 O3B 10 1 N 1 . NDP 207 ? C2B ? B NDP 1 C2B 11 1 N 1 . NDP 207 ? O2B ? B NDP 1 O2B 12 1 N 1 . NDP 207 ? C1B ? B NDP 1 C1B 13 1 N 1 . NDP 207 ? N9A ? B NDP 1 N9A 14 1 N 1 . NDP 207 ? C8A ? B NDP 1 C8A 15 1 N 1 . NDP 207 ? N7A ? B NDP 1 N7A 16 1 N 1 . NDP 207 ? C5A ? B NDP 1 C5A 17 1 N 1 . NDP 207 ? C6A ? B NDP 1 C6A 18 1 N 1 . NDP 207 ? N6A ? B NDP 1 N6A 19 1 N 1 . NDP 207 ? N1A ? B NDP 1 N1A 20 1 N 1 . NDP 207 ? C2A ? B NDP 1 C2A 21 1 N 1 . NDP 207 ? N3A ? B NDP 1 N3A 22 1 N 1 . NDP 207 ? C4A ? B NDP 1 C4A 23 1 N 1 . NDP 207 ? PN ? B NDP 1 PN 24 1 N 1 . NDP 207 ? O1N ? B NDP 1 O1N 25 1 N 1 . NDP 207 ? O2N ? B NDP 1 O2N 26 1 N 1 . NDP 207 ? O5D ? B NDP 1 O5D 27 1 N 1 . NDP 207 ? C5D ? B NDP 1 C5D 28 1 N 1 . NDP 207 ? C4D ? B NDP 1 C4D 29 1 N 1 . NDP 207 ? O4D ? B NDP 1 O4D 30 1 N 1 . NDP 207 ? C3D ? B NDP 1 C3D 31 1 N 1 . NDP 207 ? O3D ? B NDP 1 O3D 32 1 N 1 . NDP 207 ? C2D ? B NDP 1 C2D 33 1 N 1 . NDP 207 ? O2D ? B NDP 1 O2D 34 1 N 1 . NDP 207 ? C1D ? B NDP 1 C1D 35 1 N 1 . NDP 207 ? N1N ? B NDP 1 N1N 36 1 N 1 . NDP 207 ? C2N ? B NDP 1 C2N 37 1 N 1 . NDP 207 ? C3N ? B NDP 1 C3N 38 1 N 1 . NDP 207 ? C7N ? B NDP 1 C7N 39 1 N 1 . NDP 207 ? O7N ? B NDP 1 O7N 40 1 N 1 . NDP 207 ? N7N ? B NDP 1 N7N 41 1 N 1 . NDP 207 ? C4N ? B NDP 1 C4N 42 1 N 1 . NDP 207 ? C5N ? B NDP 1 C5N 43 1 N 1 . NDP 207 ? C6N ? B NDP 1 C6N 44 1 N 1 . NDP 207 ? P2B ? B NDP 1 P2B 45 1 N 1 . NDP 207 ? O1X ? B NDP 1 O1X 46 1 N 1 . NDP 207 ? O2X ? B NDP 1 O2X 47 1 N 1 . NDP 207 ? O3X ? B NDP 1 O3X # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' NDP 3 'ACETIC ACID N-[2-CHLORO-5-[6-ETHYL-2,4-DIAMINO-PYRIMID-5-YL]-PHENYL]-[BENZYL-TRIAZEN-3-YL]ETHYL ESTER' TAB 4 water HOH #