data_1D9I # _entry.id 1D9I # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.286 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1D9I RCSB RCSB009912 WWPDB D_1000009912 # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1D6W _pdbx_database_related.details 'Thrombin Selective Non-Electophilic Inhibitor MOL592' _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1D9I _pdbx_database_status.recvd_initial_deposition_date 1999-10-27 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Krishnan, R.' 1 'Mochalkin, I.' 2 'Arni, R.' 3 'Tulinsky, A.' 4 # _citation.id primary _citation.title 'Structure of thrombin complexed with selective non-electrophilic inhibitors having cyclohexyl moieties at P1.' _citation.journal_abbrev 'Acta Crystallogr.,Sect.D' _citation.journal_volume 56 _citation.page_first 294 _citation.page_last 303 _citation.year 2000 _citation.journal_id_ASTM ABCRE6 _citation.country DK _citation.journal_id_ISSN 0907-4449 _citation.journal_id_CSD 0766 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 10713516 _citation.pdbx_database_id_DOI 10.1107/S0907444900000068 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Krishnan, R.' 1 primary 'Mochalkin, I.' 2 primary 'Arni, R.' 3 primary 'Tulinsky, A.' 4 # _cell.entry_id 1D9I _cell.length_a 71.460 _cell.length_b 72.190 _cell.length_c 73.120 _cell.angle_alpha 90.00 _cell.angle_beta 100.70 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1D9I _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat THROMBIN 33151.043 1 3.4.21.5 ? ? ? 2 polymer syn HIRUGEN 1363.399 1 ? ? ? ? 3 non-polymer syn 'SODIUM ION' 22.990 2 ? ? ? ? 4 non-polymer syn ;(5S)-N-[(trans-4-aminocyclohexyl)methyl]-1,3-dioxo-2-[2-(phenylsulfonyl)ethyl]-2,3,5,8-tetrahydro-1H-[1,2,4]triazolo[1,2-a]pyridazine-5-carboxamide ; 475.561 1 ? ? ? ? 5 water nat water 18.015 98 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;ADCGLRPLFEKKSLEDKTERELLESYIDGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPW DKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLL QAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFV MKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQFG ; ;ADCGLRPLFEKKSLEDKTERELLESYIDGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPW DKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLL QAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFV MKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQFG ; A ? 2 'polypeptide(L)' no yes 'DFEEIPEE(TYS)L' DFEEIPEEYL I ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 ASP n 1 3 CYS n 1 4 GLY n 1 5 LEU n 1 6 ARG n 1 7 PRO n 1 8 LEU n 1 9 PHE n 1 10 GLU n 1 11 LYS n 1 12 LYS n 1 13 SER n 1 14 LEU n 1 15 GLU n 1 16 ASP n 1 17 LYS n 1 18 THR n 1 19 GLU n 1 20 ARG n 1 21 GLU n 1 22 LEU n 1 23 LEU n 1 24 GLU n 1 25 SER n 1 26 TYR n 1 27 ILE n 1 28 ASP n 1 29 GLY n 1 30 ARG n 1 31 ILE n 1 32 VAL n 1 33 GLU n 1 34 GLY n 1 35 SER n 1 36 ASP n 1 37 ALA n 1 38 GLU n 1 39 ILE n 1 40 GLY n 1 41 MET n 1 42 SER n 1 43 PRO n 1 44 TRP n 1 45 GLN n 1 46 VAL n 1 47 MET n 1 48 LEU n 1 49 PHE n 1 50 ARG n 1 51 LYS n 1 52 SER n 1 53 PRO n 1 54 GLN n 1 55 GLU n 1 56 LEU n 1 57 LEU n 1 58 CYS n 1 59 GLY n 1 60 ALA n 1 61 SER n 1 62 LEU n 1 63 ILE n 1 64 SER n 1 65 ASP n 1 66 ARG n 1 67 TRP n 1 68 VAL n 1 69 LEU n 1 70 THR n 1 71 ALA n 1 72 ALA n 1 73 HIS n 1 74 CYS n 1 75 LEU n 1 76 LEU n 1 77 TYR n 1 78 PRO n 1 79 PRO n 1 80 TRP n 1 81 ASP n 1 82 LYS n 1 83 ASN n 1 84 PHE n 1 85 THR n 1 86 GLU n 1 87 ASN n 1 88 ASP n 1 89 LEU n 1 90 LEU n 1 91 VAL n 1 92 ARG n 1 93 ILE n 1 94 GLY n 1 95 LYS n 1 96 HIS n 1 97 SER n 1 98 ARG n 1 99 THR n 1 100 ARG n 1 101 TYR n 1 102 GLU n 1 103 ARG n 1 104 ASN n 1 105 ILE n 1 106 GLU n 1 107 LYS n 1 108 ILE n 1 109 SER n 1 110 MET n 1 111 LEU n 1 112 GLU n 1 113 LYS n 1 114 ILE n 1 115 TYR n 1 116 ILE n 1 117 HIS n 1 118 PRO n 1 119 ARG n 1 120 TYR n 1 121 ASN n 1 122 TRP n 1 123 ARG n 1 124 GLU n 1 125 ASN n 1 126 LEU n 1 127 ASP n 1 128 ARG n 1 129 ASP n 1 130 ILE n 1 131 ALA n 1 132 LEU n 1 133 MET n 1 134 LYS n 1 135 LEU n 1 136 LYS n 1 137 LYS n 1 138 PRO n 1 139 VAL n 1 140 ALA n 1 141 PHE n 1 142 SER n 1 143 ASP n 1 144 TYR n 1 145 ILE n 1 146 HIS n 1 147 PRO n 1 148 VAL n 1 149 CYS n 1 150 LEU n 1 151 PRO n 1 152 ASP n 1 153 ARG n 1 154 GLU n 1 155 THR n 1 156 ALA n 1 157 ALA n 1 158 SER n 1 159 LEU n 1 160 LEU n 1 161 GLN n 1 162 ALA n 1 163 GLY n 1 164 TYR n 1 165 LYS n 1 166 GLY n 1 167 ARG n 1 168 VAL n 1 169 THR n 1 170 GLY n 1 171 TRP n 1 172 GLY n 1 173 ASN n 1 174 LEU n 1 175 LYS n 1 176 GLU n 1 177 THR n 1 178 TRP n 1 179 THR n 1 180 ALA n 1 181 ASN n 1 182 VAL n 1 183 GLY n 1 184 LYS n 1 185 GLY n 1 186 GLN n 1 187 PRO n 1 188 SER n 1 189 VAL n 1 190 LEU n 1 191 GLN n 1 192 VAL n 1 193 VAL n 1 194 ASN n 1 195 LEU n 1 196 PRO n 1 197 ILE n 1 198 VAL n 1 199 GLU n 1 200 ARG n 1 201 PRO n 1 202 VAL n 1 203 CYS n 1 204 LYS n 1 205 ASP n 1 206 SER n 1 207 THR n 1 208 ARG n 1 209 ILE n 1 210 ARG n 1 211 ILE n 1 212 THR n 1 213 ASP n 1 214 ASN n 1 215 MET n 1 216 PHE n 1 217 CYS n 1 218 ALA n 1 219 GLY n 1 220 TYR n 1 221 LYS n 1 222 PRO n 1 223 ASP n 1 224 GLU n 1 225 GLY n 1 226 LYS n 1 227 ARG n 1 228 GLY n 1 229 ASP n 1 230 ALA n 1 231 CYS n 1 232 GLU n 1 233 GLY n 1 234 ASP n 1 235 SER n 1 236 GLY n 1 237 GLY n 1 238 PRO n 1 239 PHE n 1 240 VAL n 1 241 MET n 1 242 LYS n 1 243 SER n 1 244 PRO n 1 245 PHE n 1 246 ASN n 1 247 ASN n 1 248 ARG n 1 249 TRP n 1 250 TYR n 1 251 GLN n 1 252 MET n 1 253 GLY n 1 254 ILE n 1 255 VAL n 1 256 SER n 1 257 TRP n 1 258 GLY n 1 259 GLU n 1 260 GLY n 1 261 CYS n 1 262 ASP n 1 263 ARG n 1 264 ASP n 1 265 GLY n 1 266 LYS n 1 267 TYR n 1 268 GLY n 1 269 PHE n 1 270 TYR n 1 271 THR n 1 272 HIS n 1 273 VAL n 1 274 PHE n 1 275 ARG n 1 276 LEU n 1 277 LYS n 1 278 LYS n 1 279 TRP n 1 280 ILE n 1 281 GLN n 1 282 LYS n 1 283 VAL n 1 284 ILE n 1 285 ASP n 1 286 GLN n 1 287 PHE n 1 288 GLY n 2 1 ASP n 2 2 PHE n 2 3 GLU n 2 4 GLU n 2 5 ILE n 2 6 PRO n 2 7 GLU n 2 8 GLU n 2 9 TYS n 2 10 LEU n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name human _entity_src_nat.pdbx_organism_scientific 'Homo sapiens' _entity_src_nat.pdbx_ncbi_taxonomy_id 9606 _entity_src_nat.genus Homo _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'Hirudo medicinalis' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 6421 _pdbx_entity_src_syn.details 'THIS SEQUENCE WAS CHEMICALLY SYNTHESIZED' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 UNP THRB_HUMAN 1 ? 334 P00734 ? 2 UNP HIR2_HIRME 2 ? 55 P28504 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1D9I A 1 B 288 ? P00734 334 ? 621 ? 1 246 2 2 1D9I I 1 ? 10 ? P28504 55 ? 64 ? 355 364 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 00P peptide-like . ;(5S)-N-[(trans-4-aminocyclohexyl)methyl]-1,3-dioxo-2-[2-(phenylsulfonyl)ethyl]-2,3,5,8-tetrahydro-1H-[1,2,4]triazolo[1,2-a]pyridazine-5-carboxamide ; ? 'C22 H29 N5 O5 S' 475.561 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 TYS 'L-peptide linking' n O-SULFO-L-TYROSINE ? 'C9 H11 N O6 S' 261.252 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1D9I _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.68 _exptl_crystal.density_percent_sol 54.16 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.3 _exptl_crystal_grow.pdbx_details ;24% PEG 8000 in 0.1M Sodium Phosphate Buffer, protein concentration: 3.5 mg/ml, pH 7.3, VAPOR DIFFUSION, HANGING DROP, temperature 298K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 143 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type RIGAKU _diffrn_detector.pdbx_collection_date 1999-01-10 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.54 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RU200' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.54 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1D9I _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F 1.0 _reflns.d_resolution_low 20.0 _reflns.d_resolution_high 2.3 _reflns.number_obs 9294 _reflns.number_all 14987 _reflns.percent_possible_obs 57 _reflns.pdbx_Rmerge_I_obs 0.058 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 1.6 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.3 _reflns_shell.d_res_low 2.5 _reflns_shell.percent_possible_all 38 _reflns_shell.Rmerge_I_obs 0.131 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 9294 _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 1D9I _refine.ls_number_reflns_obs 9092 _refine.ls_number_reflns_all 9294 _refine.pdbx_ls_sigma_I 1.0 _refine.pdbx_ls_sigma_F 1.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_d_res_low 8.0 _refine.ls_d_res_high 2.3 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.153 _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2340 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 35 _refine_hist.number_atoms_solvent 98 _refine_hist.number_atoms_total 2473 _refine_hist.d_res_high 2.3 _refine_hist.d_res_low 8.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function p_bond_d 0.016 ? ? ? 'X-RAY DIFFRACTION' ? p_angle_d 0.040 ? ? ? 'X-RAY DIFFRACTION' ? # _struct.entry_id 1D9I _struct.title 'STRUCTURE OF THROMBIN COMPLEXED WITH SELECTIVE NON-ELECTOPHILIC INHIBITORS HAVING CYCLOHEXYL MOIETIES AT P1' _struct.pdbx_descriptor THROMBIN _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1D9I _struct_keywords.pdbx_keywords 'HYDROLASE/HYDROLASE INHIBITOR' _struct_keywords.text 'GLOBULAR, HYDROLASE-HYDROLASE INHIBITOR COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? F N N 5 ? G N N 5 ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 18 B GLU A 24 H THR A 14 GLU A 14 1 ? 7 HELX_P HELX_P2 2 ALA A 71 ? CYS A 74 ? ALA A 55 CYS A 58 5 ? 4 HELX_P HELX_P3 3 PRO A 78 B ASP A 81 E PRO A 60 ASP A 60 5 ? 4 HELX_P HELX_P4 4 GLU A 154 ? LEU A 160 ? GLU A 127 LEU A 130 1 ? 7 HELX_P HELX_P5 5 GLU A 199 ? ASP A 205 ? GLU A 164 ASP A 170 1 ? 7 HELX_P HELX_P6 6 LEU A 276 ? GLY A 288 ? LEU A 234 GLY A 246 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 3 SG ? ? ? 1_555 A CYS 149 SG ? ? A CYS 1 A CYS 122 1_555 ? ? ? ? ? ? ? 2.010 ? disulf2 disulf ? ? A CYS 58 SG ? ? ? 1_555 A CYS 74 SG ? ? A CYS 42 A CYS 58 1_555 ? ? ? ? ? ? ? 2.042 ? disulf3 disulf ? ? A CYS 203 SG ? ? ? 1_555 A CYS 217 SG ? ? A CYS 168 A CYS 182 1_555 ? ? ? ? ? ? ? 2.027 ? disulf4 disulf ? ? A CYS 231 SG ? ? ? 1_555 A CYS 261 SG ? ? A CYS 191 A CYS 220 1_555 ? ? ? ? ? ? ? 2.029 ? metalc1 metalc ? ? C NA . NA ? ? ? 1_555 A LYS 204 O ? ? A NA 950 A LYS 169 1_555 ? ? ? ? ? ? ? 2.346 ? metalc2 metalc ? ? C NA . NA ? ? ? 1_555 A THR 207 O ? ? A NA 950 A THR 172 1_555 ? ? ? ? ? ? ? 2.561 ? metalc3 metalc ? ? D NA . NA ? ? ? 1_555 A LYS 266 O ? ? A NA 951 A LYS 224 1_555 ? ? ? ? ? ? ? 2.514 ? covale1 covale ? ? B GLU 8 C ? ? ? 1_555 B TYS 9 N ? ? I GLU 362 I TYS 363 1_555 ? ? ? ? ? ? ? 1.311 ? covale2 covale ? ? B TYS 9 C ? ? ? 1_555 B LEU 10 N ? ? I TYS 363 I LEU 364 1_555 ? ? ? ? ? ? ? 1.305 ? metalc4 metalc ? ? C NA . NA ? ? ? 1_555 A PHE 245 O ? A A NA 950 A PHE 204 4_546 ? ? ? ? ? ? ? 2.087 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? covale ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id SER _struct_mon_prot_cis.label_seq_id 52 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code A _struct_mon_prot_cis.auth_comp_id SER _struct_mon_prot_cis.auth_seq_id 36 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 53 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 37 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -0.30 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 8 ? B ? 7 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel B 6 7 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 SER A 35 ? ASP A 36 ? SER A 20 ASP A 21 A 2 GLN A 191 ? VAL A 198 ? GLN A 156 VAL A 163 A 3 LYS A 165 ? GLY A 170 ? LYS A 135 GLY A 140 A 4 PRO A 238 ? LYS A 242 ? PRO A 198 LYS A 202 A 5 TRP A 249 ? TRP A 257 ? TRP A 207 TRP A 215 A 6 GLY A 268 ? HIS A 272 ? GLY A 226 HIS A 230 A 7 MET A 215 ? ALA A 218 ? MET A 180 ALA A 183 A 8 GLN A 191 ? VAL A 198 ? GLN A 156 VAL A 163 B 1 LYS A 107 ? SER A 109 ? LYS A 81 SER A 83 B 2 LEU A 89 ? ILE A 93 ? LEU A 64 ILE A 68 B 3 GLN A 45 ? ARG A 50 ? GLN A 30 ARG A 35 B 4 GLU A 55 ? LEU A 62 ? GLU A 39 LEU A 46 B 5 TRP A 67 ? THR A 70 ? TRP A 51 THR A 54 B 6 ALA A 131 ? LEU A 135 ? ALA A 104 LEU A 108 B 7 LEU A 111 ? ILE A 116 ? LEU A 85 ILE A 90 C 1 LEU A 76 ? TYR A 77 A LEU A 60 TYR A 60 C 2 LYS A 82 F ASN A 83 G LYS A 60 ASN A 60 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N SER A 35 ? N SER A 20 O VAL A 192 ? O VAL A 157 A 2 3 O LEU A 195 ? O LEU A 160 N GLY A 166 ? N GLY A 136 A 3 4 N THR A 169 ? N THR A 139 O PRO A 238 ? O PRO A 198 A 4 5 O MET A 241 ? O MET A 201 N TYR A 250 ? N TYR A 208 A 5 6 O TRP A 257 ? O TRP A 215 N PHE A 269 ? N PHE A 227 A 6 7 N TYR A 270 ? N TYR A 228 O PHE A 216 ? O PHE A 181 A 7 8 O CYS A 217 ? O CYS A 182 N VAL A 198 ? N VAL A 163 B 1 2 N SER A 109 ? N SER A 83 O VAL A 91 ? O VAL A 66 B 2 3 N ARG A 92 ? N ARG A 67 O MET A 47 ? O MET A 32 B 3 4 N ARG A 50 ? N ARG A 35 O GLU A 55 ? O GLU A 39 B 4 5 O SER A 61 ? O SER A 45 N LEU A 69 ? N LEU A 53 B 5 6 N THR A 70 ? N THR A 54 O ALA A 131 ? O ALA A 104 B 6 7 O LYS A 134 ? O LYS A 107 N GLU A 112 ? N GLU A 86 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE NA A 950' AC2 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE NA A 951' AC3 Software ? ? ? ? 18 'BINDING SITE FOR RESIDUE 00P A 380' AC4 Software ? ? ? ? 13 'BINDING SITE FOR CHAIN I OF HIRUGEN' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 3 LYS A 204 ? LYS A 169 . ? 1_555 ? 2 AC1 3 THR A 207 ? THR A 172 . ? 1_555 ? 3 AC1 3 PHE A 245 A PHE A 204 . ? 4_546 ? 4 AC2 3 ASP A 262 ? ASP A 221 . ? 1_555 ? 5 AC2 3 ARG A 263 A ARG A 221 . ? 1_555 ? 6 AC2 3 LYS A 266 ? LYS A 224 . ? 1_555 ? 7 AC3 18 HIS A 73 ? HIS A 57 . ? 1_555 ? 8 AC3 18 TYR A 77 A TYR A 60 . ? 1_555 ? 9 AC3 18 TRP A 80 D TRP A 60 . ? 1_555 ? 10 AC3 18 ILE A 209 ? ILE A 174 . ? 1_555 ? 11 AC3 18 ASP A 229 ? ASP A 189 . ? 1_555 ? 12 AC3 18 ALA A 230 ? ALA A 190 . ? 1_555 ? 13 AC3 18 CYS A 231 ? CYS A 191 . ? 1_555 ? 14 AC3 18 GLU A 232 ? GLU A 192 . ? 1_555 ? 15 AC3 18 SER A 235 ? SER A 195 . ? 1_555 ? 16 AC3 18 VAL A 255 ? VAL A 213 . ? 1_555 ? 17 AC3 18 SER A 256 ? SER A 214 . ? 1_555 ? 18 AC3 18 TRP A 257 ? TRP A 215 . ? 1_555 ? 19 AC3 18 GLY A 258 ? GLY A 216 . ? 1_555 ? 20 AC3 18 GLU A 259 ? GLU A 217 . ? 1_555 ? 21 AC3 18 GLY A 260 ? GLY A 219 . ? 1_555 ? 22 AC3 18 CYS A 261 ? CYS A 220 . ? 1_555 ? 23 AC3 18 HOH F . ? HOH A 603 . ? 1_555 ? 24 AC3 18 HOH F . ? HOH A 637 . ? 1_555 ? 25 AC4 13 PHE A 49 ? PHE A 34 . ? 1_555 ? 26 AC4 13 LYS A 51 ? LYS A 36 . ? 1_555 ? 27 AC4 13 GLN A 54 ? GLN A 38 . ? 1_555 ? 28 AC4 13 LEU A 90 ? LEU A 65 . ? 1_555 ? 29 AC4 13 ARG A 98 ? ARG A 73 . ? 1_555 ? 30 AC4 13 THR A 99 ? THR A 74 . ? 1_555 ? 31 AC4 13 ARG A 100 ? ARG A 75 . ? 2_555 ? 32 AC4 13 ARG A 100 ? ARG A 75 . ? 1_555 ? 33 AC4 13 TYR A 101 ? TYR A 76 . ? 1_555 ? 34 AC4 13 LYS A 107 ? LYS A 81 . ? 1_555 ? 35 AC4 13 ILE A 108 ? ILE A 82 . ? 1_555 ? 36 AC4 13 HOH G . ? HOH I 629 . ? 1_555 ? 37 AC4 13 HOH G . ? HOH I 630 . ? 1_555 ? # _database_PDB_matrix.entry_id 1D9I _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1D9I _atom_sites.fract_transf_matrix[1][1] 0.013994 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.002644 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013852 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013918 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N NA O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 1 1 ALA ALA A B n A 1 2 ASP 2 1 1 ASP ASP A A n A 1 3 CYS 3 1 1 CYS CYS A . n A 1 4 GLY 4 2 2 GLY GLY A . n A 1 5 LEU 5 3 3 LEU LEU A . n A 1 6 ARG 6 4 4 ARG ARG A . n A 1 7 PRO 7 5 5 PRO PRO A . n A 1 8 LEU 8 6 6 LEU LEU A . n A 1 9 PHE 9 7 7 PHE PHE A . n A 1 10 GLU 10 8 8 GLU GLU A . n A 1 11 LYS 11 9 9 LYS LYS A . n A 1 12 LYS 12 10 10 LYS LYS A . n A 1 13 SER 13 11 11 SER SER A . n A 1 14 LEU 14 12 12 LEU LEU A . n A 1 15 GLU 15 13 13 GLU GLU A . n A 1 16 ASP 16 14 14 ASP ASP A . n A 1 17 LYS 17 14 14 LYS LYS A A n A 1 18 THR 18 14 14 THR THR A B n A 1 19 GLU 19 14 14 GLU GLU A C n A 1 20 ARG 20 14 14 ARG ARG A D n A 1 21 GLU 21 14 14 GLU GLU A E n A 1 22 LEU 22 14 14 LEU LEU A F n A 1 23 LEU 23 14 14 LEU LEU A G n A 1 24 GLU 24 14 14 GLU GLU A H n A 1 25 SER 25 14 14 SER SER A I n A 1 26 TYR 26 14 14 TYR TYR A J n A 1 27 ILE 27 14 14 ILE ILE A K n A 1 28 ASP 28 14 14 ASP ASP A L n A 1 29 GLY 29 14 ? ? ? A M n A 1 30 ARG 30 14 ? ? ? A N n A 1 31 ILE 31 16 16 ILE ILE A . n A 1 32 VAL 32 17 17 VAL VAL A . n A 1 33 GLU 33 18 18 GLU GLU A . n A 1 34 GLY 34 19 19 GLY GLY A . n A 1 35 SER 35 20 20 SER SER A . n A 1 36 ASP 36 21 21 ASP ASP A . n A 1 37 ALA 37 22 22 ALA ALA A . n A 1 38 GLU 38 23 23 GLU GLU A . n A 1 39 ILE 39 24 24 ILE ILE A . n A 1 40 GLY 40 25 25 GLY GLY A . n A 1 41 MET 41 26 26 MET MET A . n A 1 42 SER 42 27 27 SER SER A . n A 1 43 PRO 43 28 28 PRO PRO A . n A 1 44 TRP 44 29 29 TRP TRP A . n A 1 45 GLN 45 30 30 GLN GLN A . n A 1 46 VAL 46 31 31 VAL VAL A . n A 1 47 MET 47 32 32 MET MET A . n A 1 48 LEU 48 33 33 LEU LEU A . n A 1 49 PHE 49 34 34 PHE PHE A . n A 1 50 ARG 50 35 35 ARG ARG A . n A 1 51 LYS 51 36 36 LYS LYS A . n A 1 52 SER 52 36 36 SER SER A A n A 1 53 PRO 53 37 37 PRO PRO A . n A 1 54 GLN 54 38 38 GLN GLN A . n A 1 55 GLU 55 39 39 GLU GLU A . n A 1 56 LEU 56 40 40 LEU LEU A . n A 1 57 LEU 57 41 41 LEU LEU A . n A 1 58 CYS 58 42 42 CYS CYS A . n A 1 59 GLY 59 43 43 GLY GLY A . n A 1 60 ALA 60 44 44 ALA ALA A . n A 1 61 SER 61 45 45 SER SER A . n A 1 62 LEU 62 46 46 LEU LEU A . n A 1 63 ILE 63 47 47 ILE ILE A . n A 1 64 SER 64 48 48 SER SER A . n A 1 65 ASP 65 49 49 ASP ASP A . n A 1 66 ARG 66 50 50 ARG ARG A . n A 1 67 TRP 67 51 51 TRP TRP A . n A 1 68 VAL 68 52 52 VAL VAL A . n A 1 69 LEU 69 53 53 LEU LEU A . n A 1 70 THR 70 54 54 THR THR A . n A 1 71 ALA 71 55 55 ALA ALA A . n A 1 72 ALA 72 56 56 ALA ALA A . n A 1 73 HIS 73 57 57 HIS HIS A . n A 1 74 CYS 74 58 58 CYS CYS A . n A 1 75 LEU 75 59 59 LEU LEU A . n A 1 76 LEU 76 60 60 LEU LEU A . n A 1 77 TYR 77 60 60 TYR TYR A A n A 1 78 PRO 78 60 60 PRO PRO A B n A 1 79 PRO 79 60 60 PRO PRO A C n A 1 80 TRP 80 60 60 TRP TRP A D n A 1 81 ASP 81 60 60 ASP ASP A E n A 1 82 LYS 82 60 60 LYS LYS A F n A 1 83 ASN 83 60 60 ASN ASN A G n A 1 84 PHE 84 60 60 PHE PHE A H n A 1 85 THR 85 60 60 THR THR A I n A 1 86 GLU 86 61 61 GLU GLU A . n A 1 87 ASN 87 62 62 ASN ASN A . n A 1 88 ASP 88 63 63 ASP ASP A . n A 1 89 LEU 89 64 64 LEU LEU A . n A 1 90 LEU 90 65 65 LEU LEU A . n A 1 91 VAL 91 66 66 VAL VAL A . n A 1 92 ARG 92 67 67 ARG ARG A . n A 1 93 ILE 93 68 68 ILE ILE A . n A 1 94 GLY 94 69 69 GLY GLY A . n A 1 95 LYS 95 70 70 LYS LYS A . n A 1 96 HIS 96 71 71 HIS HIS A . n A 1 97 SER 97 72 72 SER SER A . n A 1 98 ARG 98 73 73 ARG ARG A . n A 1 99 THR 99 74 74 THR THR A . n A 1 100 ARG 100 75 75 ARG ARG A . n A 1 101 TYR 101 76 76 TYR TYR A . n A 1 102 GLU 102 77 77 GLU GLU A . n A 1 103 ARG 103 77 77 ARG ARG A A n A 1 104 ASN 104 78 78 ASN ASN A . n A 1 105 ILE 105 79 79 ILE ILE A . n A 1 106 GLU 106 80 80 GLU GLU A . n A 1 107 LYS 107 81 81 LYS LYS A . n A 1 108 ILE 108 82 82 ILE ILE A . n A 1 109 SER 109 83 83 SER SER A . n A 1 110 MET 110 84 84 MET MET A . n A 1 111 LEU 111 85 85 LEU LEU A . n A 1 112 GLU 112 86 86 GLU GLU A . n A 1 113 LYS 113 87 87 LYS LYS A . n A 1 114 ILE 114 88 88 ILE ILE A . n A 1 115 TYR 115 89 89 TYR TYR A . n A 1 116 ILE 116 90 90 ILE ILE A . n A 1 117 HIS 117 91 91 HIS HIS A . n A 1 118 PRO 118 92 92 PRO PRO A . n A 1 119 ARG 119 93 93 ARG ARG A . n A 1 120 TYR 120 94 94 TYR TYR A . n A 1 121 ASN 121 95 95 ASN ASN A . n A 1 122 TRP 122 96 96 TRP TRP A . n A 1 123 ARG 123 97 97 ARG ARG A . n A 1 124 GLU 124 97 97 GLU GLU A A n A 1 125 ASN 125 98 98 ASN ASN A . n A 1 126 LEU 126 99 99 LEU LEU A . n A 1 127 ASP 127 100 100 ASP ASP A . n A 1 128 ARG 128 101 101 ARG ARG A . n A 1 129 ASP 129 102 102 ASP ASP A . n A 1 130 ILE 130 103 103 ILE ILE A . n A 1 131 ALA 131 104 104 ALA ALA A . n A 1 132 LEU 132 105 105 LEU LEU A . n A 1 133 MET 133 106 106 MET MET A . n A 1 134 LYS 134 107 107 LYS LYS A . n A 1 135 LEU 135 108 108 LEU LEU A . n A 1 136 LYS 136 109 109 LYS LYS A . n A 1 137 LYS 137 110 110 LYS LYS A . n A 1 138 PRO 138 111 111 PRO PRO A . n A 1 139 VAL 139 112 112 VAL VAL A . n A 1 140 ALA 140 113 113 ALA ALA A . n A 1 141 PHE 141 114 114 PHE PHE A . n A 1 142 SER 142 115 115 SER SER A . n A 1 143 ASP 143 116 116 ASP ASP A . n A 1 144 TYR 144 117 117 TYR TYR A . n A 1 145 ILE 145 118 118 ILE ILE A . n A 1 146 HIS 146 119 119 HIS HIS A . n A 1 147 PRO 147 120 120 PRO PRO A . n A 1 148 VAL 148 121 121 VAL VAL A . n A 1 149 CYS 149 122 122 CYS CYS A . n A 1 150 LEU 150 123 123 LEU LEU A . n A 1 151 PRO 151 124 124 PRO PRO A . n A 1 152 ASP 152 125 125 ASP ASP A . n A 1 153 ARG 153 126 126 ARG ARG A . n A 1 154 GLU 154 127 127 GLU GLU A . n A 1 155 THR 155 128 128 THR THR A . n A 1 156 ALA 156 129 129 ALA ALA A . n A 1 157 ALA 157 129 129 ALA ALA A A n A 1 158 SER 158 129 129 SER SER A B n A 1 159 LEU 159 129 129 LEU LEU A C n A 1 160 LEU 160 130 130 LEU LEU A . n A 1 161 GLN 161 131 131 GLN GLN A . n A 1 162 ALA 162 132 132 ALA ALA A . n A 1 163 GLY 163 133 133 GLY GLY A . n A 1 164 TYR 164 134 134 TYR TYR A . n A 1 165 LYS 165 135 135 LYS LYS A . n A 1 166 GLY 166 136 136 GLY GLY A . n A 1 167 ARG 167 137 137 ARG ARG A . n A 1 168 VAL 168 138 138 VAL VAL A . n A 1 169 THR 169 139 139 THR THR A . n A 1 170 GLY 170 140 140 GLY GLY A . n A 1 171 TRP 171 141 141 TRP TRP A . n A 1 172 GLY 172 142 142 GLY GLY A . n A 1 173 ASN 173 143 143 ASN ASN A . n A 1 174 LEU 174 144 144 LEU LEU A . n A 1 175 LYS 175 145 145 LYS LYS A . n A 1 176 GLU 176 146 146 GLU GLU A . n A 1 177 THR 177 147 147 THR THR A . n A 1 178 TRP 178 147 ? ? ? A A n A 1 179 THR 179 147 ? ? ? A B n A 1 180 ALA 180 147 ? ? ? A C n A 1 181 ASN 181 147 ? ? ? A D n A 1 182 VAL 182 147 ? ? ? A E n A 1 183 GLY 183 147 ? ? ? A F n A 1 184 LYS 184 147 ? ? ? A G n A 1 185 GLY 185 150 150 GLY GLY A . n A 1 186 GLN 186 151 151 GLN GLN A . n A 1 187 PRO 187 152 152 PRO PRO A . n A 1 188 SER 188 153 153 SER SER A . n A 1 189 VAL 189 154 154 VAL VAL A . n A 1 190 LEU 190 155 155 LEU LEU A . n A 1 191 GLN 191 156 156 GLN GLN A . n A 1 192 VAL 192 157 157 VAL VAL A . n A 1 193 VAL 193 158 158 VAL VAL A . n A 1 194 ASN 194 159 159 ASN ASN A . n A 1 195 LEU 195 160 160 LEU LEU A . n A 1 196 PRO 196 161 161 PRO PRO A . n A 1 197 ILE 197 162 162 ILE ILE A . n A 1 198 VAL 198 163 163 VAL VAL A . n A 1 199 GLU 199 164 164 GLU GLU A . n A 1 200 ARG 200 165 165 ARG ARG A . n A 1 201 PRO 201 166 166 PRO PRO A . n A 1 202 VAL 202 167 167 VAL VAL A . n A 1 203 CYS 203 168 168 CYS CYS A . n A 1 204 LYS 204 169 169 LYS LYS A . n A 1 205 ASP 205 170 170 ASP ASP A . n A 1 206 SER 206 171 171 SER SER A . n A 1 207 THR 207 172 172 THR THR A . n A 1 208 ARG 208 173 173 ARG ARG A . n A 1 209 ILE 209 174 174 ILE ILE A . n A 1 210 ARG 210 175 175 ARG ARG A . n A 1 211 ILE 211 176 176 ILE ILE A . n A 1 212 THR 212 177 177 THR THR A . n A 1 213 ASP 213 178 178 ASP ASP A . n A 1 214 ASN 214 179 179 ASN ASN A . n A 1 215 MET 215 180 180 MET MET A . n A 1 216 PHE 216 181 181 PHE PHE A . n A 1 217 CYS 217 182 182 CYS CYS A . n A 1 218 ALA 218 183 183 ALA ALA A . n A 1 219 GLY 219 184 184 GLY GLY A . n A 1 220 TYR 220 184 184 TYR TYR A A n A 1 221 LYS 221 185 185 LYS LYS A . n A 1 222 PRO 222 186 186 PRO PRO A . n A 1 223 ASP 223 186 186 ASP ASP A A n A 1 224 GLU 224 186 186 GLU GLU A B n A 1 225 GLY 225 186 186 GLY GLY A C n A 1 226 LYS 226 186 186 LYS LYS A D n A 1 227 ARG 227 187 187 ARG ARG A . n A 1 228 GLY 228 188 188 GLY GLY A . n A 1 229 ASP 229 189 189 ASP ASP A . n A 1 230 ALA 230 190 190 ALA ALA A . n A 1 231 CYS 231 191 191 CYS CYS A . n A 1 232 GLU 232 192 192 GLU GLU A . n A 1 233 GLY 233 193 193 GLY GLY A . n A 1 234 ASP 234 194 194 ASP ASP A . n A 1 235 SER 235 195 195 SER SER A . n A 1 236 GLY 236 196 196 GLY GLY A . n A 1 237 GLY 237 197 197 GLY GLY A . n A 1 238 PRO 238 198 198 PRO PRO A . n A 1 239 PHE 239 199 199 PHE PHE A . n A 1 240 VAL 240 200 200 VAL VAL A . n A 1 241 MET 241 201 201 MET MET A . n A 1 242 LYS 242 202 202 LYS LYS A . n A 1 243 SER 243 203 203 SER SER A . n A 1 244 PRO 244 204 204 PRO PRO A . n A 1 245 PHE 245 204 204 PHE PHE A A n A 1 246 ASN 246 204 204 ASN ASN A B n A 1 247 ASN 247 205 205 ASN ASN A . n A 1 248 ARG 248 206 206 ARG ARG A . n A 1 249 TRP 249 207 207 TRP TRP A . n A 1 250 TYR 250 208 208 TYR TYR A . n A 1 251 GLN 251 209 209 GLN GLN A . n A 1 252 MET 252 210 210 MET MET A . n A 1 253 GLY 253 211 211 GLY GLY A . n A 1 254 ILE 254 212 212 ILE ILE A . n A 1 255 VAL 255 213 213 VAL VAL A . n A 1 256 SER 256 214 214 SER SER A . n A 1 257 TRP 257 215 215 TRP TRP A . n A 1 258 GLY 258 216 216 GLY GLY A . n A 1 259 GLU 259 217 217 GLU GLU A . n A 1 260 GLY 260 219 219 GLY GLY A . n A 1 261 CYS 261 220 220 CYS CYS A . n A 1 262 ASP 262 221 221 ASP ASP A . n A 1 263 ARG 263 221 221 ARG ARG A A n A 1 264 ASP 264 222 222 ASP ASP A . n A 1 265 GLY 265 223 223 GLY GLY A . n A 1 266 LYS 266 224 224 LYS LYS A . n A 1 267 TYR 267 225 225 TYR TYR A . n A 1 268 GLY 268 226 226 GLY GLY A . n A 1 269 PHE 269 227 227 PHE PHE A . n A 1 270 TYR 270 228 228 TYR TYR A . n A 1 271 THR 271 229 229 THR THR A . n A 1 272 HIS 272 230 230 HIS HIS A . n A 1 273 VAL 273 231 231 VAL VAL A . n A 1 274 PHE 274 232 232 PHE PHE A . n A 1 275 ARG 275 233 233 ARG ARG A . n A 1 276 LEU 276 234 234 LEU LEU A . n A 1 277 LYS 277 235 235 LYS LYS A . n A 1 278 LYS 278 236 236 LYS LYS A . n A 1 279 TRP 279 237 237 TRP TRP A . n A 1 280 ILE 280 238 238 ILE ILE A . n A 1 281 GLN 281 239 239 GLN GLN A . n A 1 282 LYS 282 240 240 LYS LYS A . n A 1 283 VAL 283 241 241 VAL VAL A . n A 1 284 ILE 284 242 242 ILE ILE A . n A 1 285 ASP 285 243 243 ASP ASP A . n A 1 286 GLN 286 244 244 GLN GLN A . n A 1 287 PHE 287 245 245 PHE PHE A . n A 1 288 GLY 288 246 246 GLY GLY A . n B 2 1 ASP 1 355 355 ASP ASP I . n B 2 2 PHE 2 356 356 PHE PHE I . n B 2 3 GLU 3 357 357 GLU GLU I . n B 2 4 GLU 4 358 358 GLU GLU I . n B 2 5 ILE 5 359 359 ILE ILE I . n B 2 6 PRO 6 360 360 PRO PRO I . n B 2 7 GLU 7 361 361 GLU GLU I . n B 2 8 GLU 8 362 362 GLU GLU I . n B 2 9 TYS 9 363 363 TYS TYS I . n B 2 10 LEU 10 364 364 LEU LEU I . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 NA 1 950 950 NA NA A . D 3 NA 1 951 951 NA NA A . E 4 00P 1 380 380 00P 00P A . F 5 HOH 1 401 401 HOH HOH A . F 5 HOH 2 402 402 HOH HOH A . F 5 HOH 3 403 403 HOH HOH A . F 5 HOH 4 405 405 HOH HOH A . F 5 HOH 5 406 406 HOH HOH A . F 5 HOH 6 407 407 HOH HOH A . F 5 HOH 7 408 408 HOH HOH A . F 5 HOH 8 409 409 HOH HOH A . F 5 HOH 9 412 412 HOH HOH A . F 5 HOH 10 413 413 HOH HOH A . F 5 HOH 11 416 416 HOH HOH A . F 5 HOH 12 418 418 HOH HOH A . F 5 HOH 13 419 419 HOH HOH A . F 5 HOH 14 420 420 HOH HOH A . F 5 HOH 15 421 421 HOH HOH A . F 5 HOH 16 422 422 HOH HOH A . F 5 HOH 17 426 426 HOH HOH A . F 5 HOH 18 428 428 HOH HOH A . F 5 HOH 19 429 429 HOH HOH A . F 5 HOH 20 430 430 HOH HOH A . F 5 HOH 21 431 431 HOH HOH A . F 5 HOH 22 435 435 HOH HOH A . F 5 HOH 23 436 436 HOH HOH A . F 5 HOH 24 437 437 HOH HOH A . F 5 HOH 25 440 440 HOH HOH A . F 5 HOH 26 442 442 HOH HOH A . F 5 HOH 27 445 445 HOH HOH A . F 5 HOH 28 449 449 HOH HOH A . F 5 HOH 29 450 450 HOH HOH A . F 5 HOH 30 451 451 HOH HOH A . F 5 HOH 31 457 457 HOH HOH A . F 5 HOH 32 461 461 HOH HOH A . F 5 HOH 33 463 463 HOH HOH A . F 5 HOH 34 465 465 HOH HOH A . F 5 HOH 35 466 466 HOH HOH A . F 5 HOH 36 471 471 HOH HOH A . F 5 HOH 37 477 477 HOH HOH A . F 5 HOH 38 482 482 HOH HOH A . F 5 HOH 39 483 483 HOH HOH A . F 5 HOH 40 490 490 HOH HOH A . F 5 HOH 41 491 491 HOH HOH A . F 5 HOH 42 494 494 HOH HOH A . F 5 HOH 43 495 495 HOH HOH A . F 5 HOH 44 497 497 HOH HOH A . F 5 HOH 45 498 498 HOH HOH A . F 5 HOH 46 501 501 HOH HOH A . F 5 HOH 47 503 503 HOH HOH A . F 5 HOH 48 515 515 HOH HOH A . F 5 HOH 49 519 519 HOH HOH A . F 5 HOH 50 522 522 HOH HOH A . F 5 HOH 51 523 523 HOH HOH A . F 5 HOH 52 525 525 HOH HOH A . F 5 HOH 53 527 527 HOH HOH A . F 5 HOH 54 535 535 HOH HOH A . F 5 HOH 55 551 551 HOH HOH A . F 5 HOH 56 555 555 HOH HOH A . F 5 HOH 57 557 557 HOH HOH A . F 5 HOH 58 566 566 HOH HOH A . F 5 HOH 59 575 575 HOH HOH A . F 5 HOH 60 601 601 HOH HOH A . F 5 HOH 61 602 602 HOH HOH A . F 5 HOH 62 603 603 HOH HOH A . F 5 HOH 63 604 604 HOH HOH A . F 5 HOH 64 605 605 HOH HOH A . F 5 HOH 65 607 607 HOH HOH A . F 5 HOH 66 608 608 HOH HOH A . F 5 HOH 67 609 609 HOH HOH A . F 5 HOH 68 610 610 HOH HOH A . F 5 HOH 69 612 612 HOH HOH A . F 5 HOH 70 613 613 HOH HOH A . F 5 HOH 71 615 615 HOH HOH A . F 5 HOH 72 616 616 HOH HOH A . F 5 HOH 73 618 618 HOH HOH A . F 5 HOH 74 619 619 HOH HOH A . F 5 HOH 75 620 620 HOH HOH A . F 5 HOH 76 621 621 HOH HOH A . F 5 HOH 77 623 623 HOH HOH A . F 5 HOH 78 625 625 HOH HOH A . F 5 HOH 79 626 626 HOH HOH A . F 5 HOH 80 628 628 HOH HOH A . F 5 HOH 81 631 631 HOH HOH A . F 5 HOH 82 632 632 HOH HOH A . F 5 HOH 83 633 633 HOH HOH A . F 5 HOH 84 634 634 HOH HOH A . F 5 HOH 85 635 635 HOH HOH A . F 5 HOH 86 636 636 HOH HOH A . F 5 HOH 87 637 637 HOH HOH A . F 5 HOH 88 639 639 HOH HOH A . F 5 HOH 89 640 640 HOH HOH A . F 5 HOH 90 642 642 HOH HOH A . F 5 HOH 91 643 643 HOH HOH A . F 5 HOH 92 644 644 HOH HOH A . F 5 HOH 93 646 646 HOH HOH A . F 5 HOH 94 647 647 HOH HOH A . G 5 HOH 1 467 467 HOH HOH I . G 5 HOH 2 617 617 HOH HOH I . G 5 HOH 3 629 629 HOH HOH I . G 5 HOH 4 630 630 HOH HOH I . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id B _pdbx_struct_mod_residue.label_comp_id TYS _pdbx_struct_mod_residue.label_seq_id 9 _pdbx_struct_mod_residue.auth_asym_id I _pdbx_struct_mod_residue.auth_comp_id TYS _pdbx_struct_mod_residue.auth_seq_id 363 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id TYR _pdbx_struct_mod_residue.details O-SULFO-L-TYROSINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1470 ? 1 MORE -24 ? 1 'SSA (A^2)' 12600 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 525 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id F _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A LYS 204 ? A LYS 169 ? 1_555 NA ? C NA . ? A NA 950 ? 1_555 O ? A THR 207 ? A THR 172 ? 1_555 77.5 ? 2 O ? A LYS 204 ? A LYS 169 ? 1_555 NA ? C NA . ? A NA 950 ? 1_555 O ? A PHE 245 ? A PHE 204 A 4_546 115.7 ? 3 O ? A THR 207 ? A THR 172 ? 1_555 NA ? C NA . ? A NA 950 ? 1_555 O ? A PHE 245 ? A PHE 204 A 4_546 99.5 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2000-10-30 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2012-12-12 5 'Structure model' 1 4 2013-03-13 6 'Structure model' 1 5 2017-10-04 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Atomic model' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Non-polymer description' 6 3 'Structure model' 'Structure summary' 7 3 'Structure model' 'Version format compliance' 8 4 'Structure model' Other 9 5 'Structure model' Other 10 6 'Structure model' 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 6 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category software # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal X-PLOR 'model building' . ? 1 PROFFT refinement . ? 2 X-PLOR phasing . ? 3 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 CB A ASP 1 A ? O A HOH 566 ? ? 1.87 2 1 O A ALA 183 ? ? O A HOH 445 ? ? 2.19 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 ASP _pdbx_validate_symm_contact.auth_seq_id_1 14 _pdbx_validate_symm_contact.PDB_ins_code_1 L _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 NH2 _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 ARG _pdbx_validate_symm_contact.auth_seq_id_2 173 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 4_556 _pdbx_validate_symm_contact.dist 2.10 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A ASP 1 A ? CG A ASP 1 A ? OD1 A ASP 1 A ? 125.84 118.30 7.54 0.90 N 2 1 CB A ASP 1 A ? CG A ASP 1 A ? OD2 A ASP 1 A ? 109.98 118.30 -8.32 0.90 N 3 1 NE A ARG 4 ? ? CZ A ARG 4 ? ? NH2 A ARG 4 ? ? 123.89 120.30 3.59 0.50 N 4 1 CB A GLU 13 ? ? CA A GLU 13 ? ? C A GLU 13 ? ? 98.10 110.40 -12.30 2.00 N 5 1 NE A ARG 14 D ? CZ A ARG 14 D ? NH1 A ARG 14 D ? 124.96 120.30 4.66 0.50 N 6 1 CB A ASP 21 ? ? CG A ASP 21 ? ? OD1 A ASP 21 ? ? 125.17 118.30 6.87 0.90 N 7 1 NE A ARG 35 ? ? CZ A ARG 35 ? ? NH1 A ARG 35 ? ? 124.81 120.30 4.51 0.50 N 8 1 CB A LEU 41 ? ? CA A LEU 41 ? ? C A LEU 41 ? ? 121.95 110.20 11.75 1.90 N 9 1 CA A LEU 41 ? ? CB A LEU 41 ? ? CG A LEU 41 ? ? 129.47 115.30 14.17 2.30 N 10 1 CA A CYS 42 ? ? CB A CYS 42 ? ? SG A CYS 42 ? ? 125.72 114.20 11.52 1.10 N 11 1 CB A ASP 49 ? ? CG A ASP 49 ? ? OD1 A ASP 49 ? ? 124.12 118.30 5.82 0.90 N 12 1 CB A ASP 49 ? ? CG A ASP 49 ? ? OD2 A ASP 49 ? ? 111.46 118.30 -6.84 0.90 N 13 1 NE A ARG 50 ? ? CZ A ARG 50 ? ? NH1 A ARG 50 ? ? 125.65 120.30 5.35 0.50 N 14 1 O A GLU 61 ? ? C A GLU 61 ? ? N A ASN 62 ? ? 110.06 122.70 -12.64 1.60 Y 15 1 CD A ARG 67 ? ? NE A ARG 67 ? ? CZ A ARG 67 ? ? 133.43 123.60 9.83 1.40 N 16 1 NE A ARG 67 ? ? CZ A ARG 67 ? ? NH1 A ARG 67 ? ? 125.48 120.30 5.18 0.50 N 17 1 NE A ARG 75 ? ? CZ A ARG 75 ? ? NH2 A ARG 75 ? ? 124.70 120.30 4.40 0.50 N 18 1 NE A ARG 77 A ? CZ A ARG 77 A ? NH2 A ARG 77 A ? 114.03 120.30 -6.27 0.50 N 19 1 NE A ARG 97 ? ? CZ A ARG 97 ? ? NH1 A ARG 97 ? ? 123.88 120.30 3.58 0.50 N 20 1 NE A ARG 97 ? ? CZ A ARG 97 ? ? NH2 A ARG 97 ? ? 117.11 120.30 -3.19 0.50 N 21 1 NE A ARG 101 ? ? CZ A ARG 101 ? ? NH1 A ARG 101 ? ? 124.43 120.30 4.13 0.50 N 22 1 NE A ARG 101 ? ? CZ A ARG 101 ? ? NH2 A ARG 101 ? ? 116.75 120.30 -3.55 0.50 N 23 1 N A ALA 113 ? ? CA A ALA 113 ? ? CB A ALA 113 ? ? 119.33 110.10 9.23 1.40 N 24 1 CB A ASP 125 ? ? CG A ASP 125 ? ? OD1 A ASP 125 ? ? 123.93 118.30 5.63 0.90 N 25 1 CB A TYR 134 ? ? CG A TYR 134 ? ? CD1 A TYR 134 ? ? 117.25 121.00 -3.75 0.60 N 26 1 NE A ARG 137 ? ? CZ A ARG 137 ? ? NH1 A ARG 137 ? ? 130.28 120.30 9.98 0.50 N 27 1 NE A ARG 137 ? ? CZ A ARG 137 ? ? NH2 A ARG 137 ? ? 112.69 120.30 -7.61 0.50 N 28 1 NE A ARG 165 ? ? CZ A ARG 165 ? ? NH2 A ARG 165 ? ? 117.18 120.30 -3.12 0.50 N 29 1 NE A ARG 173 ? ? CZ A ARG 173 ? ? NH2 A ARG 173 ? ? 117.08 120.30 -3.22 0.50 N 30 1 NE A ARG 175 ? ? CZ A ARG 175 ? ? NH2 A ARG 175 ? ? 123.69 120.30 3.39 0.50 N 31 1 CA A CYS 182 ? ? CB A CYS 182 ? ? SG A CYS 182 ? ? 121.34 114.20 7.14 1.10 N 32 1 NE A ARG 187 ? ? CZ A ARG 187 ? ? NH2 A ARG 187 ? ? 124.78 120.30 4.48 0.50 N 33 1 NE A ARG 206 ? ? CZ A ARG 206 ? ? NH2 A ARG 206 ? ? 123.82 120.30 3.52 0.50 N 34 1 CD A ARG 221 A ? NE A ARG 221 A ? CZ A ARG 221 A ? 114.06 123.60 -9.54 1.40 N 35 1 CB A TYR 228 ? ? CG A TYR 228 ? ? CD1 A TYR 228 ? ? 125.38 121.00 4.38 0.60 N 36 1 NE A ARG 233 ? ? CZ A ARG 233 ? ? NH1 A ARG 233 ? ? 123.55 120.30 3.25 0.50 N 37 1 CB I ASP 355 ? ? CG I ASP 355 ? ? OD1 I ASP 355 ? ? 125.50 118.30 7.20 0.90 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PHE A 7 ? ? -133.10 -91.54 2 1 SER A 11 ? ? 70.22 33.97 3 1 TYR A 14 J ? -64.32 2.70 4 1 ILE A 14 K ? 81.36 29.88 5 1 ASN A 60 G ? -174.90 83.91 6 1 GLU A 61 ? ? -73.31 29.07 7 1 HIS A 71 ? ? -134.93 -71.31 8 1 GLU A 77 ? ? -65.15 86.35 9 1 ARG A 77 A ? -24.22 -68.06 10 1 ARG A 93 ? ? -104.03 43.48 11 1 ASN A 95 ? ? -100.02 71.23 12 1 GLU A 97 A ? -124.79 -55.45 13 1 ASP A 170 ? ? -69.86 3.07 14 1 CYS A 191 ? ? -163.12 -167.43 15 1 SER A 195 ? ? -45.04 154.36 16 1 ASN A 205 ? ? 27.63 59.03 17 1 VAL A 213 ? ? -54.32 109.97 18 1 SER A 214 ? ? -101.39 -72.05 19 1 PRO I 360 ? ? -37.50 106.73 20 1 GLU I 361 ? ? -48.29 -12.81 # loop_ _pdbx_validate_main_chain_plane.id _pdbx_validate_main_chain_plane.PDB_model_num _pdbx_validate_main_chain_plane.auth_comp_id _pdbx_validate_main_chain_plane.auth_asym_id _pdbx_validate_main_chain_plane.auth_seq_id _pdbx_validate_main_chain_plane.PDB_ins_code _pdbx_validate_main_chain_plane.label_alt_id _pdbx_validate_main_chain_plane.improper_torsion_angle 1 1 LEU A 59 ? ? -10.15 2 1 GLU A 61 ? ? -17.03 3 1 TRP A 207 ? ? 15.96 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 ARG A 93 ? ? 0.103 'SIDE CHAIN' 2 1 ARG A 126 ? ? 0.123 'SIDE CHAIN' 3 1 ARG A 187 ? ? 0.158 'SIDE CHAIN' 4 1 ARG A 221 A ? 0.359 'SIDE CHAIN' # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 236 ? CG ? A LYS 278 CG 2 1 Y 1 A LYS 236 ? CD ? A LYS 278 CD 3 1 Y 1 A LYS 236 ? CE ? A LYS 278 CE 4 1 Y 1 A LYS 236 ? NZ ? A LYS 278 NZ 5 1 Y 1 I GLU 358 ? CB ? B GLU 4 CB 6 1 Y 1 I GLU 358 ? CG ? B GLU 4 CG 7 1 Y 1 I GLU 358 ? CD ? B GLU 4 CD 8 1 Y 1 I GLU 358 ? OE1 ? B GLU 4 OE1 9 1 Y 1 I GLU 358 ? OE2 ? B GLU 4 OE2 10 1 Y 1 I GLU 362 ? CB ? B GLU 8 CB 11 1 Y 1 I GLU 362 ? CG ? B GLU 8 CG 12 1 Y 1 I GLU 362 ? CD ? B GLU 8 CD 13 1 Y 1 I GLU 362 ? OE1 ? B GLU 8 OE1 14 1 Y 1 I GLU 362 ? OE2 ? B GLU 8 OE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 14 M A GLY 29 2 1 Y 1 A ARG 14 N A ARG 30 3 1 Y 1 A TRP 147 A A TRP 178 4 1 Y 1 A THR 147 B A THR 179 5 1 Y 1 A ALA 147 C A ALA 180 6 1 Y 1 A ASN 147 D A ASN 181 7 1 Y 1 A VAL 147 E A VAL 182 8 1 Y 1 A GLY 147 F A GLY 183 9 1 Y 1 A LYS 147 G A LYS 184 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'SODIUM ION' NA 4 ;(5S)-N-[(trans-4-aminocyclohexyl)methyl]-1,3-dioxo-2-[2-(phenylsulfonyl)ethyl]-2,3,5,8-tetrahydro-1H-[1,2,4]triazolo[1,2-a]pyridazine-5-carboxamide ; 00P 5 water HOH #