data_1D9J # _entry.id 1D9J # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.398 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1D9J pdb_00001d9j 10.2210/pdb1d9j/pdb RCSB RCSB009913 ? ? WWPDB D_1000009913 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1999-11-12 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-02-16 5 'Structure model' 1 4 2024-10-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 5 'Structure model' 'Data collection' 7 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_nmr_spectrometer 4 4 'Structure model' pdbx_struct_assembly 5 4 'Structure model' pdbx_struct_oper_list 6 4 'Structure model' struct_conn 7 4 'Structure model' struct_site 8 5 'Structure model' chem_comp_atom 9 5 'Structure model' chem_comp_bond 10 5 'Structure model' pdbx_entry_details 11 5 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_pdbx_nmr_spectrometer.model' 5 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 6 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 7 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 8 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1D9J _pdbx_database_status.recvd_initial_deposition_date 1999-10-28 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1D9L 'Solution Structure of Cecropin A(1-8)-Magainin 2 hybrid peptide analogue (Deletion GIG sequence from CA-MA)' unspecified PDB 1D9M 'Solution Structure of Cecropin A(1-8)-Magainin 2(1-12) hybrid peptide analogue (Substitution GIG sequence of CA-MA to Pro)' unspecified PDB 1D9O 'Solution Structure of Cecropin A(1-8)-Magainin 2(1-12) hybrid peptide analogue (Substitution GIG sequence of CA-MA to Pro)' unspecified PDB 1D9P 'Solution Structure of Cecropin A(1-8)-Magainin 2(1-12) hybrid peptide analogue (Substitution Trp2 of CA-MA to Leu)' unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Oh, D.' 1 'Kim, Y.' 2 # _citation.id primary _citation.title 'NMR structural characterization of cecropin A(1-8) - magainin 2(1-12) and cecropin A (1-8) - melittin (1-12) hybrid peptides.' _citation.journal_abbrev J.Pept.Res. _citation.journal_volume 53 _citation.page_first 578 _citation.page_last 589 _citation.year 1999 _citation.journal_id_ASTM JPERFA _citation.country DK _citation.journal_id_ISSN 1397-002X _citation.journal_id_CSD 2150 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 10424354 _citation.pdbx_database_id_DOI 10.1034/j.1399-3011.1999.00067.x # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Oh, D.' 1 ? primary 'Shin, S.Y.' 2 ? primary 'Kang, J.H.' 3 ? primary 'Hahm, K.S.' 4 ? primary 'Kim, K.L.' 5 ? primary 'Kim, Y.' 6 ? # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description 'CECROPIN A-MAGAININ 2 HYBRID PEPTIDE' _entity.formula_weight 2411.050 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code 'KWKLFKKIGIGKFLHSAKKF(NH2)' _entity_poly.pdbx_seq_one_letter_code_can KWKLFKKIGIGKFLHSAKKFX _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LYS n 1 2 TRP n 1 3 LYS n 1 4 LEU n 1 5 PHE n 1 6 LYS n 1 7 LYS n 1 8 ILE n 1 9 GLY n 1 10 ILE n 1 11 GLY n 1 12 LYS n 1 13 PHE n 1 14 LEU n 1 15 HIS n 1 16 SER n 1 17 ALA n 1 18 LYS n 1 19 LYS n 1 20 PHE n 1 21 NH2 n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details ;THIS PEPTIDE WAS CHEMICALLY SYNTHESIZED. THE SEQUENCE FOR THIS PEPTIDE IS A HYBRID OF SEQUENCES WHICH OCCUR NATURALLY IN HYALOPHORA CECROPIA (CECROPIA MOTH) AND XENOPUS LAEVIS (AFRICAN CLAWED FROG) ; # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 NH2 non-polymer . 'AMINO GROUP' ? 'H2 N' 16.023 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LYS 1 1 1 LYS LYS A . n A 1 2 TRP 2 2 2 TRP TRP A . n A 1 3 LYS 3 3 3 LYS LYS A . n A 1 4 LEU 4 4 4 LEU LEU A . n A 1 5 PHE 5 5 5 PHE PHE A . n A 1 6 LYS 6 6 6 LYS LYS A . n A 1 7 LYS 7 7 7 LYS LYS A . n A 1 8 ILE 8 8 8 ILE ILE A . n A 1 9 GLY 9 9 9 GLY GLY A . n A 1 10 ILE 10 10 10 ILE ILE A . n A 1 11 GLY 11 11 11 GLY GLY A . n A 1 12 LYS 12 12 12 LYS LYS A . n A 1 13 PHE 13 13 13 PHE PHE A . n A 1 14 LEU 14 14 14 LEU LEU A . n A 1 15 HIS 15 15 15 HIS HIS A . n A 1 16 SER 16 16 16 SER SER A . n A 1 17 ALA 17 17 17 ALA ALA A . n A 1 18 LYS 18 18 18 LYS LYS A . n A 1 19 LYS 19 19 19 LYS LYS A . n A 1 20 PHE 20 20 20 PHE PHE A . n A 1 21 NH2 21 21 21 NH2 NH2 A . n # _cell.entry_id 1D9J _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1D9J _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # _exptl.entry_id 1D9J _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _database_PDB_matrix.entry_id 1D9J _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1D9J _struct.title 'SOLUTION STRUCTURE OF CECROPIN A(1-8)-MAGAININ 2(1-12) HYBRID PEPTIDE' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1D9J _struct_keywords.pdbx_keywords 'ANTIMICROBIAL PROTEIN' _struct_keywords.text 'HELIX-HINGE-HELIX, ANTIMICROBIAL PROTEIN' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_db_accession _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_db_isoform 1 UNP CECA_HYACE 1 P01507 ? ? ? 2 UNP MAGA_XENLA 1 P11006 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1D9J A 1 ? 8 ? P01507 27 ? 34 ? 1 8 2 2 1D9J A 9 ? 20 ? P11006 129 ? 140 ? 9 20 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 TRP A 2 ? ILE A 8 ? TRP A 2 ILE A 8 5 ? 7 HELX_P HELX_P2 2 HIS A 15 ? LYS A 19 ? HIS A 15 LYS A 19 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id covale1 _struct_conn.conn_type_id covale _struct_conn.pdbx_leaving_atom_flag both _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id PHE _struct_conn.ptnr1_label_seq_id 20 _struct_conn.ptnr1_label_atom_id C _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_comp_id NH2 _struct_conn.ptnr2_label_seq_id 21 _struct_conn.ptnr2_label_atom_id N _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id PHE _struct_conn.ptnr1_auth_seq_id 20 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id NH2 _struct_conn.ptnr2_auth_seq_id 21 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 1.306 _struct_conn.pdbx_value_order ? _struct_conn.pdbx_role ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _pdbx_modification_feature.ordinal 1 _pdbx_modification_feature.label_comp_id NH2 _pdbx_modification_feature.label_asym_id A _pdbx_modification_feature.label_seq_id 21 _pdbx_modification_feature.label_alt_id ? _pdbx_modification_feature.modified_residue_label_comp_id PHE _pdbx_modification_feature.modified_residue_label_asym_id A _pdbx_modification_feature.modified_residue_label_seq_id 20 _pdbx_modification_feature.modified_residue_label_alt_id ? _pdbx_modification_feature.auth_comp_id NH2 _pdbx_modification_feature.auth_asym_id A _pdbx_modification_feature.auth_seq_id 21 _pdbx_modification_feature.PDB_ins_code ? _pdbx_modification_feature.symmetry 1_555 _pdbx_modification_feature.modified_residue_auth_comp_id PHE _pdbx_modification_feature.modified_residue_auth_asym_id A _pdbx_modification_feature.modified_residue_auth_seq_id 20 _pdbx_modification_feature.modified_residue_PDB_ins_code ? _pdbx_modification_feature.modified_residue_symmetry 1_555 _pdbx_modification_feature.comp_id_linking_atom . _pdbx_modification_feature.modified_residue_id_linking_atom . _pdbx_modification_feature.modified_residue_id PHE _pdbx_modification_feature.ref_pcm_id 15 _pdbx_modification_feature.ref_comp_id NH2 _pdbx_modification_feature.type None _pdbx_modification_feature.category 'Terminal amidation' # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id NH2 _struct_site.pdbx_auth_seq_id 21 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 1 _struct_site.details 'BINDING SITE FOR RESIDUE NH2 A 21' # _struct_site_gen.id 1 _struct_site_gen.site_id AC1 _struct_site_gen.pdbx_num_res 1 _struct_site_gen.label_comp_id PHE _struct_site_gen.label_asym_id A _struct_site_gen.label_seq_id 20 _struct_site_gen.pdbx_auth_ins_code ? _struct_site_gen.auth_comp_id PHE _struct_site_gen.auth_asym_id A _struct_site_gen.auth_seq_id 20 _struct_site_gen.label_atom_id . _struct_site_gen.label_alt_id ? _struct_site_gen.symmetry 1_555 _struct_site_gen.details ? # _pdbx_entry_details.entry_id 1D9J _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 3 O A ILE 10 ? ? H A PHE 13 ? ? 1.58 2 6 O A LYS 3 ? ? H A LYS 6 ? ? 1.49 3 10 O A SER 16 ? ? H A LYS 19 ? ? 1.59 4 17 O A ILE 10 ? ? H A LEU 14 ? ? 1.56 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 2 TRP A 2 ? ? 34.15 35.86 2 2 LYS A 6 ? ? -58.14 -8.70 3 2 LYS A 7 ? ? -162.86 30.23 4 4 TRP A 2 ? ? -161.40 -165.41 5 4 LYS A 7 ? ? -147.44 35.05 6 5 LYS A 6 ? ? -38.16 -26.64 7 5 LYS A 7 ? ? -152.79 54.25 8 5 ILE A 10 ? ? -165.81 -45.50 9 6 LEU A 4 ? ? -38.37 -30.03 10 10 ILE A 10 ? ? -162.97 -43.14 11 11 ILE A 10 ? ? -144.87 -41.05 12 15 TRP A 2 ? ? -172.42 -154.30 13 15 LYS A 3 ? ? -37.17 -28.95 14 16 TRP A 2 ? ? -153.86 -159.90 15 17 TRP A 2 ? ? -158.22 -151.44 16 17 LYS A 3 ? ? -48.25 -18.19 17 17 ILE A 10 ? ? -156.06 -39.86 18 18 TRP A 2 ? ? 70.62 -156.58 19 18 LYS A 3 ? ? -39.84 -24.80 20 19 ILE A 10 ? ? -148.86 -43.59 21 20 TRP A 2 ? ? -147.57 34.97 22 20 ILE A 10 ? ? -146.43 -71.51 # _pdbx_nmr_ensemble.entry_id 1D9J _pdbx_nmr_ensemble.conformers_calculated_total_number 50 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solvent_system 1 '2MM PEPTIDE; 90MM DPC MICELLES; 90% H2O, 10% D2O' ? 2 '2MM PEPTIDE; 90MM DPC MICELLES; D2O' ? # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 4.06 _pdbx_nmr_exptl_sample_conditions.ionic_strength ? _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 '2D NOESY' 1 2 1 '2D NOESY' 2 3 1 DQF-COSY 1 # _pdbx_nmr_details.entry_id 1D9J _pdbx_nmr_details.text 'THIS STRUCTURE WAS DETERMINED USING STANDARD 2D HOMONUCLEAR TECHNIQUES.' # _pdbx_nmr_refine.entry_id 1D9J _pdbx_nmr_refine.method 'HYBRID DISTANCE GEOMETRY-DYNAMICAL SIMULATED ANNEALING' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal collection XwinNMR 2.5 ? 1 processing Felix 95.0 ? 2 'data analysis' Felix 95.0 ? 3 refinement X-PLOR 3.851 BRUNGER 4 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 GLY N N N N 14 GLY CA C N N 15 GLY C C N N 16 GLY O O N N 17 GLY OXT O N N 18 GLY H H N N 19 GLY H2 H N N 20 GLY HA2 H N N 21 GLY HA3 H N N 22 GLY HXT H N N 23 HIS N N N N 24 HIS CA C N S 25 HIS C C N N 26 HIS O O N N 27 HIS CB C N N 28 HIS CG C Y N 29 HIS ND1 N Y N 30 HIS CD2 C Y N 31 HIS CE1 C Y N 32 HIS NE2 N Y N 33 HIS OXT O N N 34 HIS H H N N 35 HIS H2 H N N 36 HIS HA H N N 37 HIS HB2 H N N 38 HIS HB3 H N N 39 HIS HD1 H N N 40 HIS HD2 H N N 41 HIS HE1 H N N 42 HIS HE2 H N N 43 HIS HXT H N N 44 ILE N N N N 45 ILE CA C N S 46 ILE C C N N 47 ILE O O N N 48 ILE CB C N S 49 ILE CG1 C N N 50 ILE CG2 C N N 51 ILE CD1 C N N 52 ILE OXT O N N 53 ILE H H N N 54 ILE H2 H N N 55 ILE HA H N N 56 ILE HB H N N 57 ILE HG12 H N N 58 ILE HG13 H N N 59 ILE HG21 H N N 60 ILE HG22 H N N 61 ILE HG23 H N N 62 ILE HD11 H N N 63 ILE HD12 H N N 64 ILE HD13 H N N 65 ILE HXT H N N 66 LEU N N N N 67 LEU CA C N S 68 LEU C C N N 69 LEU O O N N 70 LEU CB C N N 71 LEU CG C N N 72 LEU CD1 C N N 73 LEU CD2 C N N 74 LEU OXT O N N 75 LEU H H N N 76 LEU H2 H N N 77 LEU HA H N N 78 LEU HB2 H N N 79 LEU HB3 H N N 80 LEU HG H N N 81 LEU HD11 H N N 82 LEU HD12 H N N 83 LEU HD13 H N N 84 LEU HD21 H N N 85 LEU HD22 H N N 86 LEU HD23 H N N 87 LEU HXT H N N 88 LYS N N N N 89 LYS CA C N S 90 LYS C C N N 91 LYS O O N N 92 LYS CB C N N 93 LYS CG C N N 94 LYS CD C N N 95 LYS CE C N N 96 LYS NZ N N N 97 LYS OXT O N N 98 LYS H H N N 99 LYS H2 H N N 100 LYS HA H N N 101 LYS HB2 H N N 102 LYS HB3 H N N 103 LYS HG2 H N N 104 LYS HG3 H N N 105 LYS HD2 H N N 106 LYS HD3 H N N 107 LYS HE2 H N N 108 LYS HE3 H N N 109 LYS HZ1 H N N 110 LYS HZ2 H N N 111 LYS HZ3 H N N 112 LYS HXT H N N 113 NH2 N N N N 114 NH2 HN1 H N N 115 NH2 HN2 H N N 116 PHE N N N N 117 PHE CA C N S 118 PHE C C N N 119 PHE O O N N 120 PHE CB C N N 121 PHE CG C Y N 122 PHE CD1 C Y N 123 PHE CD2 C Y N 124 PHE CE1 C Y N 125 PHE CE2 C Y N 126 PHE CZ C Y N 127 PHE OXT O N N 128 PHE H H N N 129 PHE H2 H N N 130 PHE HA H N N 131 PHE HB2 H N N 132 PHE HB3 H N N 133 PHE HD1 H N N 134 PHE HD2 H N N 135 PHE HE1 H N N 136 PHE HE2 H N N 137 PHE HZ H N N 138 PHE HXT H N N 139 SER N N N N 140 SER CA C N S 141 SER C C N N 142 SER O O N N 143 SER CB C N N 144 SER OG O N N 145 SER OXT O N N 146 SER H H N N 147 SER H2 H N N 148 SER HA H N N 149 SER HB2 H N N 150 SER HB3 H N N 151 SER HG H N N 152 SER HXT H N N 153 TRP N N N N 154 TRP CA C N S 155 TRP C C N N 156 TRP O O N N 157 TRP CB C N N 158 TRP CG C Y N 159 TRP CD1 C Y N 160 TRP CD2 C Y N 161 TRP NE1 N Y N 162 TRP CE2 C Y N 163 TRP CE3 C Y N 164 TRP CZ2 C Y N 165 TRP CZ3 C Y N 166 TRP CH2 C Y N 167 TRP OXT O N N 168 TRP H H N N 169 TRP H2 H N N 170 TRP HA H N N 171 TRP HB2 H N N 172 TRP HB3 H N N 173 TRP HD1 H N N 174 TRP HE1 H N N 175 TRP HE3 H N N 176 TRP HZ2 H N N 177 TRP HZ3 H N N 178 TRP HH2 H N N 179 TRP HXT H N N 180 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 GLY N CA sing N N 13 GLY N H sing N N 14 GLY N H2 sing N N 15 GLY CA C sing N N 16 GLY CA HA2 sing N N 17 GLY CA HA3 sing N N 18 GLY C O doub N N 19 GLY C OXT sing N N 20 GLY OXT HXT sing N N 21 HIS N CA sing N N 22 HIS N H sing N N 23 HIS N H2 sing N N 24 HIS CA C sing N N 25 HIS CA CB sing N N 26 HIS CA HA sing N N 27 HIS C O doub N N 28 HIS C OXT sing N N 29 HIS CB CG sing N N 30 HIS CB HB2 sing N N 31 HIS CB HB3 sing N N 32 HIS CG ND1 sing Y N 33 HIS CG CD2 doub Y N 34 HIS ND1 CE1 doub Y N 35 HIS ND1 HD1 sing N N 36 HIS CD2 NE2 sing Y N 37 HIS CD2 HD2 sing N N 38 HIS CE1 NE2 sing Y N 39 HIS CE1 HE1 sing N N 40 HIS NE2 HE2 sing N N 41 HIS OXT HXT sing N N 42 ILE N CA sing N N 43 ILE N H sing N N 44 ILE N H2 sing N N 45 ILE CA C sing N N 46 ILE CA CB sing N N 47 ILE CA HA sing N N 48 ILE C O doub N N 49 ILE C OXT sing N N 50 ILE CB CG1 sing N N 51 ILE CB CG2 sing N N 52 ILE CB HB sing N N 53 ILE CG1 CD1 sing N N 54 ILE CG1 HG12 sing N N 55 ILE CG1 HG13 sing N N 56 ILE CG2 HG21 sing N N 57 ILE CG2 HG22 sing N N 58 ILE CG2 HG23 sing N N 59 ILE CD1 HD11 sing N N 60 ILE CD1 HD12 sing N N 61 ILE CD1 HD13 sing N N 62 ILE OXT HXT sing N N 63 LEU N CA sing N N 64 LEU N H sing N N 65 LEU N H2 sing N N 66 LEU CA C sing N N 67 LEU CA CB sing N N 68 LEU CA HA sing N N 69 LEU C O doub N N 70 LEU C OXT sing N N 71 LEU CB CG sing N N 72 LEU CB HB2 sing N N 73 LEU CB HB3 sing N N 74 LEU CG CD1 sing N N 75 LEU CG CD2 sing N N 76 LEU CG HG sing N N 77 LEU CD1 HD11 sing N N 78 LEU CD1 HD12 sing N N 79 LEU CD1 HD13 sing N N 80 LEU CD2 HD21 sing N N 81 LEU CD2 HD22 sing N N 82 LEU CD2 HD23 sing N N 83 LEU OXT HXT sing N N 84 LYS N CA sing N N 85 LYS N H sing N N 86 LYS N H2 sing N N 87 LYS CA C sing N N 88 LYS CA CB sing N N 89 LYS CA HA sing N N 90 LYS C O doub N N 91 LYS C OXT sing N N 92 LYS CB CG sing N N 93 LYS CB HB2 sing N N 94 LYS CB HB3 sing N N 95 LYS CG CD sing N N 96 LYS CG HG2 sing N N 97 LYS CG HG3 sing N N 98 LYS CD CE sing N N 99 LYS CD HD2 sing N N 100 LYS CD HD3 sing N N 101 LYS CE NZ sing N N 102 LYS CE HE2 sing N N 103 LYS CE HE3 sing N N 104 LYS NZ HZ1 sing N N 105 LYS NZ HZ2 sing N N 106 LYS NZ HZ3 sing N N 107 LYS OXT HXT sing N N 108 NH2 N HN1 sing N N 109 NH2 N HN2 sing N N 110 PHE N CA sing N N 111 PHE N H sing N N 112 PHE N H2 sing N N 113 PHE CA C sing N N 114 PHE CA CB sing N N 115 PHE CA HA sing N N 116 PHE C O doub N N 117 PHE C OXT sing N N 118 PHE CB CG sing N N 119 PHE CB HB2 sing N N 120 PHE CB HB3 sing N N 121 PHE CG CD1 doub Y N 122 PHE CG CD2 sing Y N 123 PHE CD1 CE1 sing Y N 124 PHE CD1 HD1 sing N N 125 PHE CD2 CE2 doub Y N 126 PHE CD2 HD2 sing N N 127 PHE CE1 CZ doub Y N 128 PHE CE1 HE1 sing N N 129 PHE CE2 CZ sing Y N 130 PHE CE2 HE2 sing N N 131 PHE CZ HZ sing N N 132 PHE OXT HXT sing N N 133 SER N CA sing N N 134 SER N H sing N N 135 SER N H2 sing N N 136 SER CA C sing N N 137 SER CA CB sing N N 138 SER CA HA sing N N 139 SER C O doub N N 140 SER C OXT sing N N 141 SER CB OG sing N N 142 SER CB HB2 sing N N 143 SER CB HB3 sing N N 144 SER OG HG sing N N 145 SER OXT HXT sing N N 146 TRP N CA sing N N 147 TRP N H sing N N 148 TRP N H2 sing N N 149 TRP CA C sing N N 150 TRP CA CB sing N N 151 TRP CA HA sing N N 152 TRP C O doub N N 153 TRP C OXT sing N N 154 TRP CB CG sing N N 155 TRP CB HB2 sing N N 156 TRP CB HB3 sing N N 157 TRP CG CD1 doub Y N 158 TRP CG CD2 sing Y N 159 TRP CD1 NE1 sing Y N 160 TRP CD1 HD1 sing N N 161 TRP CD2 CE2 doub Y N 162 TRP CD2 CE3 sing Y N 163 TRP NE1 CE2 sing Y N 164 TRP NE1 HE1 sing N N 165 TRP CE2 CZ2 sing Y N 166 TRP CE3 CZ3 doub Y N 167 TRP CE3 HE3 sing N N 168 TRP CZ2 CH2 doub Y N 169 TRP CZ2 HZ2 sing N N 170 TRP CZ3 CH2 sing Y N 171 TRP CZ3 HZ3 sing N N 172 TRP CH2 HH2 sing N N 173 TRP OXT HXT sing N N 174 # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.type 1 AVANCE Bruker 400 ? 2 AMX Bruker 600 ? # _atom_sites.entry_id 1D9J _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O # loop_