data_1D9M # _entry.id 1D9M # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.399 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1D9M pdb_00001d9m 10.2210/pdb1d9m/pdb RCSB RCSB009916 ? ? WWPDB D_1000009916 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1999-11-12 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-02-16 5 'Structure model' 1 4 2024-11-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 5 'Structure model' 'Data collection' 7 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_nmr_spectrometer 4 4 'Structure model' pdbx_struct_assembly 5 4 'Structure model' pdbx_struct_oper_list 6 4 'Structure model' struct_conn 7 4 'Structure model' struct_site 8 5 'Structure model' chem_comp_atom 9 5 'Structure model' chem_comp_bond 10 5 'Structure model' pdbx_entry_details 11 5 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_pdbx_nmr_spectrometer.model' 5 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 6 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 7 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 8 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1D9M _pdbx_database_status.recvd_initial_deposition_date 1999-10-28 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1D9J '1D9J CONTAINS THE ORIGINAL CA-MA HYBRID PEPTIDE' unspecified PDB 1D9L '1D9L CONTAINS THE ANALOGUE OF CA-MA HYBRID PEPTIDE(P1:GIG DELETED)' unspecified PDB 1D9O 'SOLUTION STRUCTURE OF CECROPIN A(1-8)-MAGAININ 2(1-12) HYBRID PEPTIDE ANALOGUE (SUBSTITUTION GIG SEQUENCE OF CA-MA TO PRO)' unspecified PDB 1D9P 'SOLUTION STRUCTURE OF CECROPIN A(1-8)-MAGAININ 2(1-12) HYBRID PEPTIDE ANALOGUE (SUBSTITUTION TRP2 OF CA-MA TO LEU)' unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Oh, D.' 1 'Kim, Y.' 2 # _citation.id primary _citation.title 'NMR structural characterization of cecropin A(1-8) - magainin 2(1-12) and cecropin A (1-8) - melittin (1-12) hybrid peptides.' _citation.journal_abbrev J.Pept.Res. _citation.journal_volume 53 _citation.page_first 578 _citation.page_last 589 _citation.year 1999 _citation.journal_id_ASTM JPERFA _citation.country DK _citation.journal_id_ISSN 1397-002X _citation.journal_id_CSD 2150 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 10424354 _citation.pdbx_database_id_DOI 10.1034/j.1399-3011.1999.00067.x # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Oh, D.' 1 ? primary 'Shin, S.Y.' 2 ? primary 'Kang, J.H.' 3 ? primary 'Hahm, K.S.' 4 ? primary 'Kim, K.L.' 5 ? primary 'Kim, Y.' 6 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'CECROPIN A(1-8)-MAGAININ 2 HYBRID PEPTIDE ANALOGUE' _entity.formula_weight 2280.903 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code 'KWKLFKKIPKFLHSAKKF(NH2)' _entity_poly.pdbx_seq_one_letter_code_can KWKLFKKIPKFLHSAKKFX _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LYS n 1 2 TRP n 1 3 LYS n 1 4 LEU n 1 5 PHE n 1 6 LYS n 1 7 LYS n 1 8 ILE n 1 9 PRO n 1 10 LYS n 1 11 PHE n 1 12 LEU n 1 13 HIS n 1 14 SER n 1 15 ALA n 1 16 LYS n 1 17 LYS n 1 18 PHE n 1 19 NH2 n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'African clawed frog, cecropia moth' _entity_src_gen.gene_src_genus 'Xenopus, Hyalophora' _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species , _entity_src_gen.gene_src_strain , _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Xenopus laevis, Hyalophora cecropia' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 8355,7123 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location MEMBRANE _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 NH2 non-polymer . 'AMINO GROUP' ? 'H2 N' 16.023 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LYS 1 1 1 LYS LYS A . n A 1 2 TRP 2 2 2 TRP TRP A . n A 1 3 LYS 3 3 3 LYS LYS A . n A 1 4 LEU 4 4 4 LEU LEU A . n A 1 5 PHE 5 5 5 PHE PHE A . n A 1 6 LYS 6 6 6 LYS LYS A . n A 1 7 LYS 7 7 7 LYS LYS A . n A 1 8 ILE 8 8 8 ILE ILE A . n A 1 9 PRO 9 9 9 PRO PRO A . n A 1 10 LYS 10 10 10 LYS LYS A . n A 1 11 PHE 11 11 11 PHE PHE A . n A 1 12 LEU 12 12 12 LEU LEU A . n A 1 13 HIS 13 13 13 HIS HIS A . n A 1 14 SER 14 14 14 SER SER A . n A 1 15 ALA 15 15 15 ALA ALA A . n A 1 16 LYS 16 16 16 LYS LYS A . n A 1 17 LYS 17 17 17 LYS LYS A . n A 1 18 PHE 18 18 18 PHE PHE A . n A 1 19 NH2 19 19 19 NH2 NH2 A . n # _cell.entry_id 1D9M _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1D9M _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # _exptl.entry_id 1D9M _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _database_PDB_matrix.entry_id 1D9M _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1D9M _struct.title 'SOLUTION STRUCTURE OF CECROPIN A(1-8)-MAGAININ 2 HYBRID PEPTIDE ANALOGUE(P2)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1D9M _struct_keywords.pdbx_keywords 'MEMBRANE PROTEIN' _struct_keywords.text 'HELIX-HINGE-HELIX, MEMBRANE PROTEIN' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_db_accession _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_db_isoform 1 UNP CECA_HYACE 1 P01507 ? ? ? 2 UNP MAGA_XENLA 1 P11006 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1D9M A 1 ? 8 ? P01507 27 ? 34 ? 1 8 2 2 1D9M A 9 ? 18 ? P11006 223 ? 232 ? 9 18 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 TRP A 2 ? LYS A 7 ? TRP A 2 LYS A 7 5 ? 6 HELX_P HELX_P2 2 LYS A 10 ? LYS A 16 ? LYS A 10 LYS A 16 1 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id covale1 _struct_conn.conn_type_id covale _struct_conn.pdbx_leaving_atom_flag both _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id PHE _struct_conn.ptnr1_label_seq_id 18 _struct_conn.ptnr1_label_atom_id C _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_comp_id NH2 _struct_conn.ptnr2_label_seq_id 19 _struct_conn.ptnr2_label_atom_id N _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id PHE _struct_conn.ptnr1_auth_seq_id 18 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id NH2 _struct_conn.ptnr2_auth_seq_id 19 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 1.305 _struct_conn.pdbx_value_order ? _struct_conn.pdbx_role ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _pdbx_modification_feature.ordinal 1 _pdbx_modification_feature.label_comp_id NH2 _pdbx_modification_feature.label_asym_id A _pdbx_modification_feature.label_seq_id 19 _pdbx_modification_feature.label_alt_id ? _pdbx_modification_feature.modified_residue_label_comp_id PHE _pdbx_modification_feature.modified_residue_label_asym_id A _pdbx_modification_feature.modified_residue_label_seq_id 18 _pdbx_modification_feature.modified_residue_label_alt_id ? _pdbx_modification_feature.auth_comp_id NH2 _pdbx_modification_feature.auth_asym_id A _pdbx_modification_feature.auth_seq_id 19 _pdbx_modification_feature.PDB_ins_code ? _pdbx_modification_feature.symmetry 1_555 _pdbx_modification_feature.modified_residue_auth_comp_id PHE _pdbx_modification_feature.modified_residue_auth_asym_id A _pdbx_modification_feature.modified_residue_auth_seq_id 18 _pdbx_modification_feature.modified_residue_PDB_ins_code ? _pdbx_modification_feature.modified_residue_symmetry 1_555 _pdbx_modification_feature.comp_id_linking_atom . _pdbx_modification_feature.modified_residue_id_linking_atom . _pdbx_modification_feature.modified_residue_id PHE _pdbx_modification_feature.ref_pcm_id 15 _pdbx_modification_feature.ref_comp_id NH2 _pdbx_modification_feature.type None _pdbx_modification_feature.category 'Terminal amidation' # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id NH2 _struct_site.pdbx_auth_seq_id 19 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 2 _struct_site.details 'BINDING SITE FOR RESIDUE NH2 A 19' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 2 ALA A 15 ? ALA A 15 . ? 1_555 ? 2 AC1 2 PHE A 18 ? PHE A 18 . ? 1_555 ? # _pdbx_entry_details.entry_id 1D9M _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 3 O A LYS 3 ? ? H A LYS 6 ? ? 1.59 2 9 O A LEU 12 ? ? H A ALA 15 ? ? 1.51 3 11 O A LEU 12 ? ? H A ALA 15 ? ? 1.50 4 11 O A LYS 10 ? ? H A HIS 13 ? ? 1.55 5 17 O A ALA 15 ? ? HN1 A NH2 19 ? ? 1.55 6 19 O A LYS 3 ? ? H A LYS 6 ? ? 1.50 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 9 ? ? -66.64 56.07 2 2 TRP A 2 ? ? -155.82 -95.08 3 3 TRP A 2 ? ? -165.38 -122.16 4 3 PRO A 9 ? ? -71.27 46.20 5 5 TRP A 2 ? ? -147.37 21.77 6 5 LYS A 7 ? ? -104.81 67.18 7 8 TRP A 2 ? ? -165.33 62.32 8 8 PRO A 9 ? ? -78.96 44.44 9 10 TRP A 2 ? ? -161.17 -70.64 10 10 PRO A 9 ? ? -69.21 96.14 11 11 TRP A 2 ? ? -115.26 -158.73 12 11 PRO A 9 ? ? -68.28 83.64 13 12 ILE A 8 ? ? -44.46 103.88 14 13 TRP A 2 ? ? -158.21 -138.36 15 14 TRP A 2 ? ? -135.03 -72.86 16 15 TRP A 2 ? ? -162.82 71.45 17 15 LYS A 7 ? ? -152.38 32.35 18 16 LYS A 10 ? ? -84.35 33.68 19 18 LYS A 7 ? ? -149.82 42.78 20 19 TRP A 2 ? ? -140.83 -117.08 21 19 LYS A 3 ? ? -44.22 -98.23 22 19 LEU A 4 ? ? -44.53 -19.77 23 19 PRO A 9 ? ? -65.10 89.34 # _pdbx_nmr_ensemble.entry_id 1D9M _pdbx_nmr_ensemble.conformers_calculated_total_number 50 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solvent_system 1 '2MM PEPTIDE; 90MM DPC MICELLES; 90% H2O, 10% D2O' ? 2 '2MM PEPTIDE; 90MM DPC MICELLES; D2O' ? # loop_ _pdbx_nmr_exptl_sample_conditions.conditions_id _pdbx_nmr_exptl_sample_conditions.temperature _pdbx_nmr_exptl_sample_conditions.pressure _pdbx_nmr_exptl_sample_conditions.pH _pdbx_nmr_exptl_sample_conditions.ionic_strength _pdbx_nmr_exptl_sample_conditions.pressure_units _pdbx_nmr_exptl_sample_conditions.temperature_units 1 303 1 4.78 ? atm K 2 298 1 4.78 ? atm K 3 318 1 4.78 ? atm K # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 '2D NOESY' 1 2 1 DQF-COSY 1 3 1 '2D NOESY' 2 4 2 '2D NOESY' 1 5 3 '2D NOESY' 1 # _pdbx_nmr_details.entry_id 1D9M _pdbx_nmr_details.text 'THIS STRUCTURE WAS DETERMINED USING STANDARD 2D HOMONUCLEAR TECHNIQUES.' # _pdbx_nmr_refine.entry_id 1D9M _pdbx_nmr_refine.method 'HYBRID DISTANCE GEOMETRY-DYNAMICAL SIMULATED ANNEALING' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal collection XwinNMR 2.5 ? 1 processing Felix 95.0 ? 2 'data analysis' Felix 95.0 ? 3 refinement X-PLOR 3.851 BRUNGER 4 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 HIS N N N N 14 HIS CA C N S 15 HIS C C N N 16 HIS O O N N 17 HIS CB C N N 18 HIS CG C Y N 19 HIS ND1 N Y N 20 HIS CD2 C Y N 21 HIS CE1 C Y N 22 HIS NE2 N Y N 23 HIS OXT O N N 24 HIS H H N N 25 HIS H2 H N N 26 HIS HA H N N 27 HIS HB2 H N N 28 HIS HB3 H N N 29 HIS HD1 H N N 30 HIS HD2 H N N 31 HIS HE1 H N N 32 HIS HE2 H N N 33 HIS HXT H N N 34 ILE N N N N 35 ILE CA C N S 36 ILE C C N N 37 ILE O O N N 38 ILE CB C N S 39 ILE CG1 C N N 40 ILE CG2 C N N 41 ILE CD1 C N N 42 ILE OXT O N N 43 ILE H H N N 44 ILE H2 H N N 45 ILE HA H N N 46 ILE HB H N N 47 ILE HG12 H N N 48 ILE HG13 H N N 49 ILE HG21 H N N 50 ILE HG22 H N N 51 ILE HG23 H N N 52 ILE HD11 H N N 53 ILE HD12 H N N 54 ILE HD13 H N N 55 ILE HXT H N N 56 LEU N N N N 57 LEU CA C N S 58 LEU C C N N 59 LEU O O N N 60 LEU CB C N N 61 LEU CG C N N 62 LEU CD1 C N N 63 LEU CD2 C N N 64 LEU OXT O N N 65 LEU H H N N 66 LEU H2 H N N 67 LEU HA H N N 68 LEU HB2 H N N 69 LEU HB3 H N N 70 LEU HG H N N 71 LEU HD11 H N N 72 LEU HD12 H N N 73 LEU HD13 H N N 74 LEU HD21 H N N 75 LEU HD22 H N N 76 LEU HD23 H N N 77 LEU HXT H N N 78 LYS N N N N 79 LYS CA C N S 80 LYS C C N N 81 LYS O O N N 82 LYS CB C N N 83 LYS CG C N N 84 LYS CD C N N 85 LYS CE C N N 86 LYS NZ N N N 87 LYS OXT O N N 88 LYS H H N N 89 LYS H2 H N N 90 LYS HA H N N 91 LYS HB2 H N N 92 LYS HB3 H N N 93 LYS HG2 H N N 94 LYS HG3 H N N 95 LYS HD2 H N N 96 LYS HD3 H N N 97 LYS HE2 H N N 98 LYS HE3 H N N 99 LYS HZ1 H N N 100 LYS HZ2 H N N 101 LYS HZ3 H N N 102 LYS HXT H N N 103 NH2 N N N N 104 NH2 HN1 H N N 105 NH2 HN2 H N N 106 PHE N N N N 107 PHE CA C N S 108 PHE C C N N 109 PHE O O N N 110 PHE CB C N N 111 PHE CG C Y N 112 PHE CD1 C Y N 113 PHE CD2 C Y N 114 PHE CE1 C Y N 115 PHE CE2 C Y N 116 PHE CZ C Y N 117 PHE OXT O N N 118 PHE H H N N 119 PHE H2 H N N 120 PHE HA H N N 121 PHE HB2 H N N 122 PHE HB3 H N N 123 PHE HD1 H N N 124 PHE HD2 H N N 125 PHE HE1 H N N 126 PHE HE2 H N N 127 PHE HZ H N N 128 PHE HXT H N N 129 PRO N N N N 130 PRO CA C N S 131 PRO C C N N 132 PRO O O N N 133 PRO CB C N N 134 PRO CG C N N 135 PRO CD C N N 136 PRO OXT O N N 137 PRO H H N N 138 PRO HA H N N 139 PRO HB2 H N N 140 PRO HB3 H N N 141 PRO HG2 H N N 142 PRO HG3 H N N 143 PRO HD2 H N N 144 PRO HD3 H N N 145 PRO HXT H N N 146 SER N N N N 147 SER CA C N S 148 SER C C N N 149 SER O O N N 150 SER CB C N N 151 SER OG O N N 152 SER OXT O N N 153 SER H H N N 154 SER H2 H N N 155 SER HA H N N 156 SER HB2 H N N 157 SER HB3 H N N 158 SER HG H N N 159 SER HXT H N N 160 TRP N N N N 161 TRP CA C N S 162 TRP C C N N 163 TRP O O N N 164 TRP CB C N N 165 TRP CG C Y N 166 TRP CD1 C Y N 167 TRP CD2 C Y N 168 TRP NE1 N Y N 169 TRP CE2 C Y N 170 TRP CE3 C Y N 171 TRP CZ2 C Y N 172 TRP CZ3 C Y N 173 TRP CH2 C Y N 174 TRP OXT O N N 175 TRP H H N N 176 TRP H2 H N N 177 TRP HA H N N 178 TRP HB2 H N N 179 TRP HB3 H N N 180 TRP HD1 H N N 181 TRP HE1 H N N 182 TRP HE3 H N N 183 TRP HZ2 H N N 184 TRP HZ3 H N N 185 TRP HH2 H N N 186 TRP HXT H N N 187 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 HIS N CA sing N N 13 HIS N H sing N N 14 HIS N H2 sing N N 15 HIS CA C sing N N 16 HIS CA CB sing N N 17 HIS CA HA sing N N 18 HIS C O doub N N 19 HIS C OXT sing N N 20 HIS CB CG sing N N 21 HIS CB HB2 sing N N 22 HIS CB HB3 sing N N 23 HIS CG ND1 sing Y N 24 HIS CG CD2 doub Y N 25 HIS ND1 CE1 doub Y N 26 HIS ND1 HD1 sing N N 27 HIS CD2 NE2 sing Y N 28 HIS CD2 HD2 sing N N 29 HIS CE1 NE2 sing Y N 30 HIS CE1 HE1 sing N N 31 HIS NE2 HE2 sing N N 32 HIS OXT HXT sing N N 33 ILE N CA sing N N 34 ILE N H sing N N 35 ILE N H2 sing N N 36 ILE CA C sing N N 37 ILE CA CB sing N N 38 ILE CA HA sing N N 39 ILE C O doub N N 40 ILE C OXT sing N N 41 ILE CB CG1 sing N N 42 ILE CB CG2 sing N N 43 ILE CB HB sing N N 44 ILE CG1 CD1 sing N N 45 ILE CG1 HG12 sing N N 46 ILE CG1 HG13 sing N N 47 ILE CG2 HG21 sing N N 48 ILE CG2 HG22 sing N N 49 ILE CG2 HG23 sing N N 50 ILE CD1 HD11 sing N N 51 ILE CD1 HD12 sing N N 52 ILE CD1 HD13 sing N N 53 ILE OXT HXT sing N N 54 LEU N CA sing N N 55 LEU N H sing N N 56 LEU N H2 sing N N 57 LEU CA C sing N N 58 LEU CA CB sing N N 59 LEU CA HA sing N N 60 LEU C O doub N N 61 LEU C OXT sing N N 62 LEU CB CG sing N N 63 LEU CB HB2 sing N N 64 LEU CB HB3 sing N N 65 LEU CG CD1 sing N N 66 LEU CG CD2 sing N N 67 LEU CG HG sing N N 68 LEU CD1 HD11 sing N N 69 LEU CD1 HD12 sing N N 70 LEU CD1 HD13 sing N N 71 LEU CD2 HD21 sing N N 72 LEU CD2 HD22 sing N N 73 LEU CD2 HD23 sing N N 74 LEU OXT HXT sing N N 75 LYS N CA sing N N 76 LYS N H sing N N 77 LYS N H2 sing N N 78 LYS CA C sing N N 79 LYS CA CB sing N N 80 LYS CA HA sing N N 81 LYS C O doub N N 82 LYS C OXT sing N N 83 LYS CB CG sing N N 84 LYS CB HB2 sing N N 85 LYS CB HB3 sing N N 86 LYS CG CD sing N N 87 LYS CG HG2 sing N N 88 LYS CG HG3 sing N N 89 LYS CD CE sing N N 90 LYS CD HD2 sing N N 91 LYS CD HD3 sing N N 92 LYS CE NZ sing N N 93 LYS CE HE2 sing N N 94 LYS CE HE3 sing N N 95 LYS NZ HZ1 sing N N 96 LYS NZ HZ2 sing N N 97 LYS NZ HZ3 sing N N 98 LYS OXT HXT sing N N 99 NH2 N HN1 sing N N 100 NH2 N HN2 sing N N 101 PHE N CA sing N N 102 PHE N H sing N N 103 PHE N H2 sing N N 104 PHE CA C sing N N 105 PHE CA CB sing N N 106 PHE CA HA sing N N 107 PHE C O doub N N 108 PHE C OXT sing N N 109 PHE CB CG sing N N 110 PHE CB HB2 sing N N 111 PHE CB HB3 sing N N 112 PHE CG CD1 doub Y N 113 PHE CG CD2 sing Y N 114 PHE CD1 CE1 sing Y N 115 PHE CD1 HD1 sing N N 116 PHE CD2 CE2 doub Y N 117 PHE CD2 HD2 sing N N 118 PHE CE1 CZ doub Y N 119 PHE CE1 HE1 sing N N 120 PHE CE2 CZ sing Y N 121 PHE CE2 HE2 sing N N 122 PHE CZ HZ sing N N 123 PHE OXT HXT sing N N 124 PRO N CA sing N N 125 PRO N CD sing N N 126 PRO N H sing N N 127 PRO CA C sing N N 128 PRO CA CB sing N N 129 PRO CA HA sing N N 130 PRO C O doub N N 131 PRO C OXT sing N N 132 PRO CB CG sing N N 133 PRO CB HB2 sing N N 134 PRO CB HB3 sing N N 135 PRO CG CD sing N N 136 PRO CG HG2 sing N N 137 PRO CG HG3 sing N N 138 PRO CD HD2 sing N N 139 PRO CD HD3 sing N N 140 PRO OXT HXT sing N N 141 SER N CA sing N N 142 SER N H sing N N 143 SER N H2 sing N N 144 SER CA C sing N N 145 SER CA CB sing N N 146 SER CA HA sing N N 147 SER C O doub N N 148 SER C OXT sing N N 149 SER CB OG sing N N 150 SER CB HB2 sing N N 151 SER CB HB3 sing N N 152 SER OG HG sing N N 153 SER OXT HXT sing N N 154 TRP N CA sing N N 155 TRP N H sing N N 156 TRP N H2 sing N N 157 TRP CA C sing N N 158 TRP CA CB sing N N 159 TRP CA HA sing N N 160 TRP C O doub N N 161 TRP C OXT sing N N 162 TRP CB CG sing N N 163 TRP CB HB2 sing N N 164 TRP CB HB3 sing N N 165 TRP CG CD1 doub Y N 166 TRP CG CD2 sing Y N 167 TRP CD1 NE1 sing Y N 168 TRP CD1 HD1 sing N N 169 TRP CD2 CE2 doub Y N 170 TRP CD2 CE3 sing Y N 171 TRP NE1 CE2 sing Y N 172 TRP NE1 HE1 sing N N 173 TRP CE2 CZ2 sing Y N 174 TRP CE3 CZ3 doub Y N 175 TRP CE3 HE3 sing N N 176 TRP CZ2 CH2 doub Y N 177 TRP CZ2 HZ2 sing N N 178 TRP CZ3 CH2 sing Y N 179 TRP CZ3 HZ3 sing N N 180 TRP CH2 HH2 sing N N 181 TRP OXT HXT sing N N 182 # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.type 1 AVANCE Bruker 400 ? 2 AMX Bruker 600 ? # _atom_sites.entry_id 1D9M _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O # loop_