data_1DAX # _entry.id 1DAX # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.355 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1DAX pdb_00001dax 10.2210/pdb1dax/pdb WWPDB D_1000172717 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1DAX _pdbx_database_status.recvd_initial_deposition_date 1997-12-01 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Davy, S.L.' 1 'Osborne, M.J.' 2 'Moore, G.R.' 3 # _citation.id primary _citation.title ;Determination of the structure of oxidised Desulfovibrio africanus ferredoxin I by 1H NMR spectroscopy and comparison of its solution structure with its crystal structure. ; _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 277 _citation.page_first 683 _citation.page_last 706 _citation.year 1998 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 9533888 _citation.pdbx_database_id_DOI 10.1006/jmbi.1998.1631 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Davy, S.L.' 1 ? primary 'Osborne, M.J.' 2 ? primary 'Moore, G.R.' 3 ? # _cell.entry_id 1DAX _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1DAX _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'FERREDOXIN I' 7206.928 1 ? ? ? OXIDIZED 2 non-polymer syn 'IRON/SULFUR CLUSTER' 351.640 1 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ARKFYVDQDECIACESCVEIAPGAFAMDPEIEKAYVKDVEGASQEEVEEAMDTCPVQCIHWEDE _entity_poly.pdbx_seq_one_letter_code_can ARKFYVDQDECIACESCVEIAPGAFAMDPEIEKAYVKDVEGASQEEVEEAMDTCPVQCIHWEDE _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 ARG n 1 3 LYS n 1 4 PHE n 1 5 TYR n 1 6 VAL n 1 7 ASP n 1 8 GLN n 1 9 ASP n 1 10 GLU n 1 11 CYS n 1 12 ILE n 1 13 ALA n 1 14 CYS n 1 15 GLU n 1 16 SER n 1 17 CYS n 1 18 VAL n 1 19 GLU n 1 20 ILE n 1 21 ALA n 1 22 PRO n 1 23 GLY n 1 24 ALA n 1 25 PHE n 1 26 ALA n 1 27 MET n 1 28 ASP n 1 29 PRO n 1 30 GLU n 1 31 ILE n 1 32 GLU n 1 33 LYS n 1 34 ALA n 1 35 TYR n 1 36 VAL n 1 37 LYS n 1 38 ASP n 1 39 VAL n 1 40 GLU n 1 41 GLY n 1 42 ALA n 1 43 SER n 1 44 GLN n 1 45 GLU n 1 46 GLU n 1 47 VAL n 1 48 GLU n 1 49 GLU n 1 50 ALA n 1 51 MET n 1 52 ASP n 1 53 THR n 1 54 CYS n 1 55 PRO n 1 56 VAL n 1 57 GLN n 1 58 CYS n 1 59 ILE n 1 60 HIS n 1 61 TRP n 1 62 GLU n 1 63 ASP n 1 64 GLU n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name ? _entity_src_nat.pdbx_organism_scientific 'Desulfovibrio africanus' _entity_src_nat.pdbx_ncbi_taxonomy_id 873 _entity_src_nat.genus Desulfovibrio _entity_src_nat.species ? _entity_src_nat.strain BENGHAZI _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code FER1_DESAF _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession P00210 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_seq_one_letter_code ARKFYVDQDECIACESCVEIAPGAFAMDPEIEKAYVKDVEGASQEEVEEAMDTCPVQCIHWEDE _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1DAX _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 64 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P00210 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 64 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 64 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SF4 non-polymer . 'IRON/SULFUR CLUSTER' ? 'Fe4 S4' 351.640 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 DQF-COSY 1 2 1 TOCSY 1 3 1 NOESY 1 4 1 '1D NOE' 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 7.2 _pdbx_nmr_exptl_sample_conditions.ionic_strength ? _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '90%H2O/10%D2O, 99.9%D2O' # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.field_strength 1 'JEOL GX-400' JEOL 400 2 'JEOL A-500' Bruker 500 3 'BRUKER AMX500 AND AMX600' Varian 600 4 'VARIAN UNITY INOVA 600' Varian 600 # _pdbx_nmr_refine.entry_id 1DAX _pdbx_nmr_refine.method 'DISTANCE GEOMETRY, DG-SIMULATED ANNEALING' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_details.entry_id 1DAX _pdbx_nmr_details.text ;THE STRUCTURES WERE OBTAINED USING 1H-1H 2D NMR EXPERIMENTS (DQF-COSY, TOCSY, NOESY). ADDITIONALLY 1D NOE EXPERIMENTS PROVIDED INFORMATION ON THE REGIONS OF THE PROTEIN CLOSE TO THE PARAMAGNETIC 4FE-4S CLUSTER. ; # _pdbx_nmr_ensemble.entry_id 1DAX _pdbx_nmr_ensemble.conformers_calculated_total_number 75 _pdbx_nmr_ensemble.conformers_submitted_total_number 1 _pdbx_nmr_ensemble.conformer_selection_criteria ? # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal refinement DIANA 2.5 GUNTERT,WUTHRICH 1 'structure solution' DIANA 2.5 ? 2 'structure solution' X-PLOR 3.843 ? 3 # _exptl.entry_id 1DAX _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 1DAX _struct.title 'OXIDISED DESULFOVIBRIO AFRICANUS FERREDOXIN I, NMR, MINIMIZED AVERAGE STRUCTURE' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1DAX _struct_keywords.pdbx_keywords 'ELECTRON TRANSPORT' _struct_keywords.text 'ELECTRON TRANSPORT, OXIDISED DESULFOVIBRIO AFRICANUS FERREDOXIN I, ELECTRON-TRANSFER PROTEIN, 4FE-4S CLUSTER' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A Y N 1 ? B N N 2 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 16 ? ALA A 21 ? SER A 16 ALA A 21 1 ? 6 HELX_P HELX_P2 2 GLN A 44 ? THR A 53 ? GLN A 44 THR A 53 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A CYS 11 SG ? ? ? 1_555 B SF4 . FE1 ? ? A CYS 11 A SF4 65 1_555 ? ? ? ? ? ? ? 2.178 ? ? metalc2 metalc ? ? A CYS 14 SG ? ? ? 1_555 B SF4 . FE2 ? ? A CYS 14 A SF4 65 1_555 ? ? ? ? ? ? ? 2.181 ? ? metalc3 metalc ? ? A CYS 14 O ? ? ? 1_555 B SF4 . FE2 ? ? A CYS 14 A SF4 65 1_555 ? ? ? ? ? ? ? 2.444 ? ? metalc4 metalc ? ? A CYS 17 SG ? ? ? 1_555 B SF4 . FE3 ? ? A CYS 17 A SF4 65 1_555 ? ? ? ? ? ? ? 2.179 ? ? metalc5 metalc ? ? A CYS 54 SG ? ? ? 1_555 B SF4 . FE4 ? ? A CYS 54 A SF4 65 1_555 ? ? ? ? ? ? ? 2.179 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id A _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 PHE A 25 ? MET A 27 ? PHE A 25 MET A 27 A 2 ALA A 34 ? VAL A 36 ? ALA A 34 VAL A 36 # _pdbx_struct_sheet_hbond.sheet_id A _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id O _pdbx_struct_sheet_hbond.range_1_label_comp_id ALA _pdbx_struct_sheet_hbond.range_1_label_asym_id A _pdbx_struct_sheet_hbond.range_1_label_seq_id 26 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id O _pdbx_struct_sheet_hbond.range_1_auth_comp_id ALA _pdbx_struct_sheet_hbond.range_1_auth_asym_id A _pdbx_struct_sheet_hbond.range_1_auth_seq_id 26 _pdbx_struct_sheet_hbond.range_2_label_atom_id N _pdbx_struct_sheet_hbond.range_2_label_comp_id TYR _pdbx_struct_sheet_hbond.range_2_label_asym_id A _pdbx_struct_sheet_hbond.range_2_label_seq_id 35 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id N _pdbx_struct_sheet_hbond.range_2_auth_comp_id TYR _pdbx_struct_sheet_hbond.range_2_auth_asym_id A _pdbx_struct_sheet_hbond.range_2_auth_seq_id 35 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id SF4 _struct_site.pdbx_auth_seq_id 65 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 7 _struct_site.details 'BINDING SITE FOR RESIDUE SF4 A 65' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 7 CYS A 11 ? CYS A 11 . ? 1_555 ? 2 AC1 7 ILE A 12 ? ILE A 12 . ? 1_555 ? 3 AC1 7 CYS A 14 ? CYS A 14 . ? 1_555 ? 4 AC1 7 CYS A 17 ? CYS A 17 . ? 1_555 ? 5 AC1 7 ALA A 34 ? ALA A 34 . ? 1_555 ? 6 AC1 7 CYS A 54 ? CYS A 54 . ? 1_555 ? 7 AC1 7 CYS A 58 ? CYS A 58 . ? 1_555 ? # _database_PDB_matrix.entry_id 1DAX _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1DAX _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C FE H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 1 1 ALA ALA A . n A 1 2 ARG 2 2 2 ARG ARG A . n A 1 3 LYS 3 3 3 LYS LYS A . n A 1 4 PHE 4 4 4 PHE PHE A . n A 1 5 TYR 5 5 5 TYR TYR A . n A 1 6 VAL 6 6 6 VAL VAL A . n A 1 7 ASP 7 7 7 ASP ASP A . n A 1 8 GLN 8 8 8 GLN GLN A . n A 1 9 ASP 9 9 9 ASP ASP A . n A 1 10 GLU 10 10 10 GLU GLU A . n A 1 11 CYS 11 11 11 CYS CYS A . n A 1 12 ILE 12 12 12 ILE ILE A . n A 1 13 ALA 13 13 13 ALA ALA A . n A 1 14 CYS 14 14 14 CYS CYS A . n A 1 15 GLU 15 15 15 GLU GLU A . n A 1 16 SER 16 16 16 SER SER A . n A 1 17 CYS 17 17 17 CYS CYS A . n A 1 18 VAL 18 18 18 VAL VAL A . n A 1 19 GLU 19 19 19 GLU GLU A . n A 1 20 ILE 20 20 20 ILE ILE A . n A 1 21 ALA 21 21 21 ALA ALA A . n A 1 22 PRO 22 22 22 PRO PRO A . n A 1 23 GLY 23 23 23 GLY GLY A . n A 1 24 ALA 24 24 24 ALA ALA A . n A 1 25 PHE 25 25 25 PHE PHE A . n A 1 26 ALA 26 26 26 ALA ALA A . n A 1 27 MET 27 27 27 MET MET A . n A 1 28 ASP 28 28 28 ASP ASP A . n A 1 29 PRO 29 29 29 PRO PRO A . n A 1 30 GLU 30 30 30 GLU GLU A . n A 1 31 ILE 31 31 31 ILE ILE A . n A 1 32 GLU 32 32 32 GLU GLU A . n A 1 33 LYS 33 33 33 LYS LYS A . n A 1 34 ALA 34 34 34 ALA ALA A . n A 1 35 TYR 35 35 35 TYR TYR A . n A 1 36 VAL 36 36 36 VAL VAL A . n A 1 37 LYS 37 37 37 LYS LYS A . n A 1 38 ASP 38 38 38 ASP ASP A . n A 1 39 VAL 39 39 39 VAL VAL A . n A 1 40 GLU 40 40 40 GLU GLU A . n A 1 41 GLY 41 41 41 GLY GLY A . n A 1 42 ALA 42 42 42 ALA ALA A . n A 1 43 SER 43 43 43 SER SER A . n A 1 44 GLN 44 44 44 GLN GLN A . n A 1 45 GLU 45 45 45 GLU GLU A . n A 1 46 GLU 46 46 46 GLU GLU A . n A 1 47 VAL 47 47 47 VAL VAL A . n A 1 48 GLU 48 48 48 GLU GLU A . n A 1 49 GLU 49 49 49 GLU GLU A . n A 1 50 ALA 50 50 50 ALA ALA A . n A 1 51 MET 51 51 51 MET MET A . n A 1 52 ASP 52 52 52 ASP ASP A . n A 1 53 THR 53 53 53 THR THR A . n A 1 54 CYS 54 54 54 CYS CYS A . n A 1 55 PRO 55 55 55 PRO PRO A . n A 1 56 VAL 56 56 56 VAL VAL A . n A 1 57 GLN 57 57 57 GLN GLN A . n A 1 58 CYS 58 58 58 CYS CYS A . n A 1 59 ILE 59 59 59 ILE ILE A . n A 1 60 HIS 60 60 60 HIS HIS A . n A 1 61 TRP 61 61 61 TRP TRP A . n A 1 62 GLU 62 62 62 GLU GLU A . n A 1 63 ASP 63 63 63 ASP ASP A . n A 1 64 GLU 64 64 64 GLU GLU A . n # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id SF4 _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 65 _pdbx_nonpoly_scheme.auth_seq_num 65 _pdbx_nonpoly_scheme.pdb_mon_id SF4 _pdbx_nonpoly_scheme.auth_mon_id FS4 _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.pdb_ins_code . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 11 ? A CYS 11 ? 1_555 FE1 ? B SF4 . ? A SF4 65 ? 1_555 S2 ? B SF4 . ? A SF4 65 ? 1_555 113.8 ? 2 SG ? A CYS 11 ? A CYS 11 ? 1_555 FE1 ? B SF4 . ? A SF4 65 ? 1_555 S3 ? B SF4 . ? A SF4 65 ? 1_555 116.6 ? 3 S2 ? B SF4 . ? A SF4 65 ? 1_555 FE1 ? B SF4 . ? A SF4 65 ? 1_555 S3 ? B SF4 . ? A SF4 65 ? 1_555 108.0 ? 4 SG ? A CYS 11 ? A CYS 11 ? 1_555 FE1 ? B SF4 . ? A SF4 65 ? 1_555 S4 ? B SF4 . ? A SF4 65 ? 1_555 104.6 ? 5 S2 ? B SF4 . ? A SF4 65 ? 1_555 FE1 ? B SF4 . ? A SF4 65 ? 1_555 S4 ? B SF4 . ? A SF4 65 ? 1_555 105.0 ? 6 S3 ? B SF4 . ? A SF4 65 ? 1_555 FE1 ? B SF4 . ? A SF4 65 ? 1_555 S4 ? B SF4 . ? A SF4 65 ? 1_555 108.0 ? 7 SG ? A CYS 14 ? A CYS 14 ? 1_555 FE2 ? B SF4 . ? A SF4 65 ? 1_555 S1 ? B SF4 . ? A SF4 65 ? 1_555 100.4 ? 8 SG ? A CYS 14 ? A CYS 14 ? 1_555 FE2 ? B SF4 . ? A SF4 65 ? 1_555 S3 ? B SF4 . ? A SF4 65 ? 1_555 113.9 ? 9 S1 ? B SF4 . ? A SF4 65 ? 1_555 FE2 ? B SF4 . ? A SF4 65 ? 1_555 S3 ? B SF4 . ? A SF4 65 ? 1_555 100.3 ? 10 SG ? A CYS 14 ? A CYS 14 ? 1_555 FE2 ? B SF4 . ? A SF4 65 ? 1_555 S4 ? B SF4 . ? A SF4 65 ? 1_555 136.2 ? 11 S1 ? B SF4 . ? A SF4 65 ? 1_555 FE2 ? B SF4 . ? A SF4 65 ? 1_555 S4 ? B SF4 . ? A SF4 65 ? 1_555 98.0 ? 12 S3 ? B SF4 . ? A SF4 65 ? 1_555 FE2 ? B SF4 . ? A SF4 65 ? 1_555 S4 ? B SF4 . ? A SF4 65 ? 1_555 101.3 ? 13 SG ? A CYS 14 ? A CYS 14 ? 1_555 FE2 ? B SF4 . ? A SF4 65 ? 1_555 O ? A CYS 14 ? A CYS 14 ? 1_555 82.7 ? 14 S1 ? B SF4 . ? A SF4 65 ? 1_555 FE2 ? B SF4 . ? A SF4 65 ? 1_555 O ? A CYS 14 ? A CYS 14 ? 1_555 118.8 ? 15 S3 ? B SF4 . ? A SF4 65 ? 1_555 FE2 ? B SF4 . ? A SF4 65 ? 1_555 O ? A CYS 14 ? A CYS 14 ? 1_555 134.5 ? 16 S4 ? B SF4 . ? A SF4 65 ? 1_555 FE2 ? B SF4 . ? A SF4 65 ? 1_555 O ? A CYS 14 ? A CYS 14 ? 1_555 53.6 ? 17 SG ? A CYS 17 ? A CYS 17 ? 1_555 FE3 ? B SF4 . ? A SF4 65 ? 1_555 S1 ? B SF4 . ? A SF4 65 ? 1_555 102.2 ? 18 SG ? A CYS 17 ? A CYS 17 ? 1_555 FE3 ? B SF4 . ? A SF4 65 ? 1_555 S2 ? B SF4 . ? A SF4 65 ? 1_555 128.3 ? 19 S1 ? B SF4 . ? A SF4 65 ? 1_555 FE3 ? B SF4 . ? A SF4 65 ? 1_555 S2 ? B SF4 . ? A SF4 65 ? 1_555 105.3 ? 20 SG ? A CYS 17 ? A CYS 17 ? 1_555 FE3 ? B SF4 . ? A SF4 65 ? 1_555 S4 ? B SF4 . ? A SF4 65 ? 1_555 113.8 ? 21 S1 ? B SF4 . ? A SF4 65 ? 1_555 FE3 ? B SF4 . ? A SF4 65 ? 1_555 S4 ? B SF4 . ? A SF4 65 ? 1_555 107.2 ? 22 S2 ? B SF4 . ? A SF4 65 ? 1_555 FE3 ? B SF4 . ? A SF4 65 ? 1_555 S4 ? B SF4 . ? A SF4 65 ? 1_555 98.6 ? 23 SG ? A CYS 54 ? A CYS 54 ? 1_555 FE4 ? B SF4 . ? A SF4 65 ? 1_555 S1 ? B SF4 . ? A SF4 65 ? 1_555 115.1 ? 24 SG ? A CYS 54 ? A CYS 54 ? 1_555 FE4 ? B SF4 . ? A SF4 65 ? 1_555 S2 ? B SF4 . ? A SF4 65 ? 1_555 119.7 ? 25 S1 ? B SF4 . ? A SF4 65 ? 1_555 FE4 ? B SF4 . ? A SF4 65 ? 1_555 S2 ? B SF4 . ? A SF4 65 ? 1_555 104.0 ? 26 SG ? A CYS 54 ? A CYS 54 ? 1_555 FE4 ? B SF4 . ? A SF4 65 ? 1_555 S3 ? B SF4 . ? A SF4 65 ? 1_555 113.2 ? 27 S1 ? B SF4 . ? A SF4 65 ? 1_555 FE4 ? B SF4 . ? A SF4 65 ? 1_555 S3 ? B SF4 . ? A SF4 65 ? 1_555 103.1 ? 28 S2 ? B SF4 . ? A SF4 65 ? 1_555 FE4 ? B SF4 . ? A SF4 65 ? 1_555 S3 ? B SF4 . ? A SF4 65 ? 1_555 99.4 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1999-01-13 2 'Structure model' 1 1 2008-03-24 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-02-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Database references' 4 4 'Structure model' 'Derived calculations' 5 4 'Structure model' 'Experimental preparation' 6 4 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_database_status 3 4 'Structure model' pdbx_nmr_exptl_sample_conditions 4 4 'Structure model' pdbx_struct_assembly 5 4 'Structure model' pdbx_struct_oper_list 6 4 'Structure model' struct_conn 7 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_database_status.process_site' 4 4 'Structure model' '_pdbx_nmr_exptl_sample_conditions.pressure_units' 5 4 'Structure model' '_struct_conn.pdbx_dist_value' 6 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 7 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 8 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 9 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 10 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 11 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 12 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 13 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 14 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 15 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 16 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 17 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 18 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 19 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 20 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal X-PLOR 'model building' . ? 1 X-PLOR refinement . ? 2 X-PLOR phasing . ? 3 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A ASP 7 ? ? H A ASP 9 ? ? 0.23 2 1 OD2 A ASP 28 ? ? HD2 A PRO 29 ? ? 1.05 3 1 HA A MET 27 ? ? O A LYS 33 ? ? 1.07 4 1 HB2 A ALA 42 ? ? HG22 A VAL 47 ? ? 1.11 5 1 HB A ILE 20 ? ? HB3 A ALA 50 ? ? 1.19 6 1 O A ASP 7 ? ? N A ASP 9 ? ? 1.19 7 1 HG13 A ILE 12 ? ? H A ALA 13 ? ? 1.24 8 1 HA A TYR 5 ? ? HG13 A VAL 36 ? ? 1.25 9 1 HB3 A GLU 10 ? ? HB3 A CYS 58 ? ? 1.28 10 1 HG22 A VAL 6 ? ? CZ A PHE 25 ? ? 1.29 11 1 C A ASP 7 ? ? H A ASP 9 ? ? 1.32 12 1 HG12 A VAL 6 ? ? HB A ILE 59 ? ? 1.35 13 1 CG A ASP 28 ? ? HD2 A PRO 29 ? ? 1.39 14 1 O A TYR 5 ? ? HG13 A ILE 59 ? ? 1.41 15 1 O A GLN 44 ? ? HB2 A GLU 48 ? ? 1.47 16 1 O A ASP 28 ? ? HA A GLU 32 ? ? 1.53 17 1 HG11 A VAL 6 ? ? O A CYS 58 ? ? 1.54 18 1 HG3 A GLN 8 ? ? O A ALA 34 ? ? 1.59 19 1 O A ILE 31 ? ? N A LYS 33 ? ? 2.02 20 1 CA A MET 27 ? ? O A LYS 33 ? ? 2.06 21 1 CG2 A VAL 6 ? ? CZ A PHE 25 ? ? 2.15 22 1 C A ASP 7 ? ? N A ASP 9 ? ? 2.17 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 3 ? ? -123.94 -156.17 2 1 PHE A 4 ? ? 165.92 177.08 3 1 TYR A 5 ? ? 174.40 -160.02 4 1 GLN A 8 ? ? -0.86 -0.05 5 1 ALA A 13 ? ? 161.87 25.77 6 1 ILE A 20 ? ? -63.43 7.78 7 1 ALA A 21 ? ? -178.15 66.19 8 1 PRO A 22 ? ? -73.57 32.76 9 1 ALA A 26 ? ? -174.62 112.47 10 1 GLU A 32 ? ? 14.85 43.37 11 1 CYS A 58 ? ? -76.37 28.74 # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 1 _pdbx_validate_planes.auth_comp_id ARG _pdbx_validate_planes.auth_asym_id A _pdbx_validate_planes.auth_seq_id 2 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.089 _pdbx_validate_planes.type 'SIDE CHAIN' # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name 'IRON/SULFUR CLUSTER' _pdbx_entity_nonpoly.comp_id SF4 #