data_1DBM # _entry.id 1DBM # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1DBM WWPDB D_1000172722 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1DBM _pdbx_database_status.recvd_initial_deposition_date 1993-08-24 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site ? _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Arevalo, J.H.' 1 'Wilson, I.A.' 2 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Molecular basis of crossreactivity and the limits of antibody-antigen complementarity.' Nature 365 859 863 1993 NATUAS UK 0028-0836 0006 ? 8413674 10.1038/365859a0 1 ;Structural Analysis of Antibody Specificity: Detailed Comparison of Five Fab'-Steroid Complexes ; 'To be Published' ? ? ? ? ? ? ? 0353 ? ? ? 2 ;Three-Dimensional Structure of an Anti-Steroid Fab' and Progesterone-Fab' Complex ; J.Mol.Biol. 231 103 ? 1993 JMOBAK UK 0022-2836 0070 ? ? ? 3 ;Analysis of an Anti-Progesterone Antibody: Variable Crystal Morphology of the Fab' and Steroid-Fab' Complexes ; Immunology 62 511 ? 1987 IMMUAM UK 0019-2805 0753 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Arevalo, J.H.' 1 primary 'Taussig, M.J.' 2 primary 'Wilson, I.A.' 3 1 'Arevalo, J.H.' 4 1 'Hassig, C.A.' 5 1 'Stura, E.A.' 6 1 'Taussig, M.J.' 7 1 'Wilson, I.A.' 8 2 'Arevalo, J.H.' 9 2 'Stura, E.A.' 10 2 'Taussig, M.J.' 11 2 'Wilson, I.A.' 12 3 'Stura, E.A.' 13 3 'Arevalo, J.H.' 14 3 'Feinstein, A.' 15 3 'Heap, R.B.' 16 3 'Taussig, M.J.' 17 3 'Wilson, I.A.' 18 # _cell.entry_id 1DBM _cell.length_a 134.760 _cell.length_b 134.760 _cell.length_c 124.210 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1DBM _symmetry.space_group_name_H-M 'P 64 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 181 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'IGG1-KAPPA DB3 FAB (LIGHT CHAIN)' 23880.588 1 ? ? ? ? 2 polymer man 'IGG1-KAPPA DB3 FAB (HEAVY CHAIN)' 23754.656 1 ? ? ? ? 3 non-polymer syn PROGESTERONE-11-ALPHA-OL-HEMISUCCINATE 430.534 1 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;DVVMTQIPLSLPVNLGDQASISCRSSQSLIHSNGNTYLHWYLQKPGQSPKLLMYKVSNRFYGVPDRFSGSGSGTDFTLKI SRVEAEDLGIYFCSQSSHVPPTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSER QNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNR ; ;DVVMTQIPLSLPVNLGDQASISCRSSQSLIHSNGNTYLHWYLQKPGQSPKLLMYKVSNRFYGVPDRFSGSGSGTDFTLKI SRVEAEDLGIYFCSQSSHVPPTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSER QNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNR ; L ? 2 'polypeptide(L)' no no ;QIQLVQSGPELKKPGETVKISCKASGYAFTNYGVNWVKEAPGKELKWMGWINIYTGEPTYVDDFKGRFAFSLETSASTAY LEINNLKNEDTATYFCTRGDYVNWYFDVWGAGTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTW NSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSPRPSETVTCNVAHPASSTKVDKKIVPR ; ;QIQLVQSGPELKKPGETVKISCKASGYAFTNYGVNWVKEAPGKELKWMGWINIYTGEPTYVDDFKGRFAFSLETSASTAY LEINNLKNEDTATYFCTRGDYVNWYFDVWGAGTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTW NSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSPRPSETVTCNVAHPASSTKVDKKIVPR ; H ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASP n 1 2 VAL n 1 3 VAL n 1 4 MET n 1 5 THR n 1 6 GLN n 1 7 ILE n 1 8 PRO n 1 9 LEU n 1 10 SER n 1 11 LEU n 1 12 PRO n 1 13 VAL n 1 14 ASN n 1 15 LEU n 1 16 GLY n 1 17 ASP n 1 18 GLN n 1 19 ALA n 1 20 SER n 1 21 ILE n 1 22 SER n 1 23 CYS n 1 24 ARG n 1 25 SER n 1 26 SER n 1 27 GLN n 1 28 SER n 1 29 LEU n 1 30 ILE n 1 31 HIS n 1 32 SER n 1 33 ASN n 1 34 GLY n 1 35 ASN n 1 36 THR n 1 37 TYR n 1 38 LEU n 1 39 HIS n 1 40 TRP n 1 41 TYR n 1 42 LEU n 1 43 GLN n 1 44 LYS n 1 45 PRO n 1 46 GLY n 1 47 GLN n 1 48 SER n 1 49 PRO n 1 50 LYS n 1 51 LEU n 1 52 LEU n 1 53 MET n 1 54 TYR n 1 55 LYS n 1 56 VAL n 1 57 SER n 1 58 ASN n 1 59 ARG n 1 60 PHE n 1 61 TYR n 1 62 GLY n 1 63 VAL n 1 64 PRO n 1 65 ASP n 1 66 ARG n 1 67 PHE n 1 68 SER n 1 69 GLY n 1 70 SER n 1 71 GLY n 1 72 SER n 1 73 GLY n 1 74 THR n 1 75 ASP n 1 76 PHE n 1 77 THR n 1 78 LEU n 1 79 LYS n 1 80 ILE n 1 81 SER n 1 82 ARG n 1 83 VAL n 1 84 GLU n 1 85 ALA n 1 86 GLU n 1 87 ASP n 1 88 LEU n 1 89 GLY n 1 90 ILE n 1 91 TYR n 1 92 PHE n 1 93 CYS n 1 94 SER n 1 95 GLN n 1 96 SER n 1 97 SER n 1 98 HIS n 1 99 VAL n 1 100 PRO n 1 101 PRO n 1 102 THR n 1 103 PHE n 1 104 GLY n 1 105 GLY n 1 106 GLY n 1 107 THR n 1 108 LYS n 1 109 LEU n 1 110 GLU n 1 111 ILE n 1 112 LYS n 1 113 ARG n 1 114 ALA n 1 115 ASP n 1 116 ALA n 1 117 ALA n 1 118 PRO n 1 119 THR n 1 120 VAL n 1 121 SER n 1 122 ILE n 1 123 PHE n 1 124 PRO n 1 125 PRO n 1 126 SER n 1 127 SER n 1 128 GLU n 1 129 GLN n 1 130 LEU n 1 131 THR n 1 132 SER n 1 133 GLY n 1 134 GLY n 1 135 ALA n 1 136 SER n 1 137 VAL n 1 138 VAL n 1 139 CYS n 1 140 PHE n 1 141 LEU n 1 142 ASN n 1 143 ASN n 1 144 PHE n 1 145 TYR n 1 146 PRO n 1 147 LYS n 1 148 ASP n 1 149 ILE n 1 150 ASN n 1 151 VAL n 1 152 LYS n 1 153 TRP n 1 154 LYS n 1 155 ILE n 1 156 ASP n 1 157 GLY n 1 158 SER n 1 159 GLU n 1 160 ARG n 1 161 GLN n 1 162 ASN n 1 163 GLY n 1 164 VAL n 1 165 LEU n 1 166 ASN n 1 167 SER n 1 168 TRP n 1 169 THR n 1 170 ASP n 1 171 GLN n 1 172 ASP n 1 173 SER n 1 174 LYS n 1 175 ASP n 1 176 SER n 1 177 THR n 1 178 TYR n 1 179 SER n 1 180 MET n 1 181 SER n 1 182 SER n 1 183 THR n 1 184 LEU n 1 185 THR n 1 186 LEU n 1 187 THR n 1 188 LYS n 1 189 ASP n 1 190 GLU n 1 191 TYR n 1 192 GLU n 1 193 ARG n 1 194 HIS n 1 195 ASN n 1 196 SER n 1 197 TYR n 1 198 THR n 1 199 CYS n 1 200 GLU n 1 201 ALA n 1 202 THR n 1 203 HIS n 1 204 LYS n 1 205 THR n 1 206 SER n 1 207 THR n 1 208 SER n 1 209 PRO n 1 210 ILE n 1 211 VAL n 1 212 LYS n 1 213 SER n 1 214 PHE n 1 215 ASN n 1 216 ARG n 2 1 GLN n 2 2 ILE n 2 3 GLN n 2 4 LEU n 2 5 VAL n 2 6 GLN n 2 7 SER n 2 8 GLY n 2 9 PRO n 2 10 GLU n 2 11 LEU n 2 12 LYS n 2 13 LYS n 2 14 PRO n 2 15 GLY n 2 16 GLU n 2 17 THR n 2 18 VAL n 2 19 LYS n 2 20 ILE n 2 21 SER n 2 22 CYS n 2 23 LYS n 2 24 ALA n 2 25 SER n 2 26 GLY n 2 27 TYR n 2 28 ALA n 2 29 PHE n 2 30 THR n 2 31 ASN n 2 32 TYR n 2 33 GLY n 2 34 VAL n 2 35 ASN n 2 36 TRP n 2 37 VAL n 2 38 LYS n 2 39 GLU n 2 40 ALA n 2 41 PRO n 2 42 GLY n 2 43 LYS n 2 44 GLU n 2 45 LEU n 2 46 LYS n 2 47 TRP n 2 48 MET n 2 49 GLY n 2 50 TRP n 2 51 ILE n 2 52 ASN n 2 53 ILE n 2 54 TYR n 2 55 THR n 2 56 GLY n 2 57 GLU n 2 58 PRO n 2 59 THR n 2 60 TYR n 2 61 VAL n 2 62 ASP n 2 63 ASP n 2 64 PHE n 2 65 LYS n 2 66 GLY n 2 67 ARG n 2 68 PHE n 2 69 ALA n 2 70 PHE n 2 71 SER n 2 72 LEU n 2 73 GLU n 2 74 THR n 2 75 SER n 2 76 ALA n 2 77 SER n 2 78 THR n 2 79 ALA n 2 80 TYR n 2 81 LEU n 2 82 GLU n 2 83 ILE n 2 84 ASN n 2 85 ASN n 2 86 LEU n 2 87 LYS n 2 88 ASN n 2 89 GLU n 2 90 ASP n 2 91 THR n 2 92 ALA n 2 93 THR n 2 94 TYR n 2 95 PHE n 2 96 CYS n 2 97 THR n 2 98 ARG n 2 99 GLY n 2 100 ASP n 2 101 TYR n 2 102 VAL n 2 103 ASN n 2 104 TRP n 2 105 TYR n 2 106 PHE n 2 107 ASP n 2 108 VAL n 2 109 TRP n 2 110 GLY n 2 111 ALA n 2 112 GLY n 2 113 THR n 2 114 THR n 2 115 VAL n 2 116 THR n 2 117 VAL n 2 118 SER n 2 119 SER n 2 120 ALA n 2 121 LYS n 2 122 THR n 2 123 THR n 2 124 PRO n 2 125 PRO n 2 126 SER n 2 127 VAL n 2 128 TYR n 2 129 PRO n 2 130 LEU n 2 131 ALA n 2 132 PRO n 2 133 GLY n 2 134 SER n 2 135 ALA n 2 136 ALA n 2 137 GLN n 2 138 THR n 2 139 ASN n 2 140 SER n 2 141 MET n 2 142 VAL n 2 143 THR n 2 144 LEU n 2 145 GLY n 2 146 CYS n 2 147 LEU n 2 148 VAL n 2 149 LYS n 2 150 GLY n 2 151 TYR n 2 152 PHE n 2 153 PRO n 2 154 GLU n 2 155 PRO n 2 156 VAL n 2 157 THR n 2 158 VAL n 2 159 THR n 2 160 TRP n 2 161 ASN n 2 162 SER n 2 163 GLY n 2 164 SER n 2 165 LEU n 2 166 SER n 2 167 SER n 2 168 GLY n 2 169 VAL n 2 170 HIS n 2 171 THR n 2 172 PHE n 2 173 PRO n 2 174 ALA n 2 175 VAL n 2 176 LEU n 2 177 GLN n 2 178 SER n 2 179 ASP n 2 180 LEU n 2 181 TYR n 2 182 THR n 2 183 LEU n 2 184 SER n 2 185 SER n 2 186 SER n 2 187 VAL n 2 188 THR n 2 189 VAL n 2 190 PRO n 2 191 SER n 2 192 SER n 2 193 PRO n 2 194 ARG n 2 195 PRO n 2 196 SER n 2 197 GLU n 2 198 THR n 2 199 VAL n 2 200 THR n 2 201 CYS n 2 202 ASN n 2 203 VAL n 2 204 ALA n 2 205 HIS n 2 206 PRO n 2 207 ALA n 2 208 SER n 2 209 SER n 2 210 THR n 2 211 LYS n 2 212 VAL n 2 213 ASP n 2 214 LYS n 2 215 LYS n 2 216 ILE n 2 217 VAL n 2 218 PRO n 2 219 ARG n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? 'house mouse' ? ? ? ? ? ? ? ? 'Mus musculus' 10090 ? ? ? ? ? HYBRIDOMA ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample ? ? ? 'house mouse' ? ? ? ? ? ? ? ? 'Mus musculus' 10090 ? ? ? ? ? HYBRIDOMA ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_db_accession _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_db_isoform 1 GB AAB09710 1 1589925 1 ;DIVMTQSPLSLPVSLGDQASISCRSSQSVVHSNGNTYLEWFLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKI SRVEAEDLGVYYCFQASHVPWTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSER QNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRGEC ; ? 2 UNP GC1_MOUSE 2 P01868 1 ;AKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSPRPSETV TCNVAHPASSTKVDKKIVPRDCGCKPCICTVPEVSSVFIFPPKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFVDDVE VHTAQTQPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSAAFPAPIEKTISKTKGRPKAPQVYTIPPPKEQMAKDKV SLTCMITDFFPEDITVEWQWNGQPAENYKNTQPIMNTNGSYFVYSKLNVQKSNWEAGNTFTCSVLHEGLHNHHTEKSLSH SPGK ; ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1DBM L 1 ? 216 ? 1589925 1 ? 216 ? 1 211 2 2 1DBM H 120 ? 219 ? P01868 1 ? 100 ? 114 228 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1DBM VAL L 2 ? GB 1589925 ILE 2 CONFLICT 2 1 1 1DBM ILE L 7 ? GB 1589925 SER 7 CONFLICT 7 2 1 1DBM ASN L 14 ? GB 1589925 SER 14 CONFLICT 14 3 1 1DBM LEU L 29 B GB 1589925 VAL 29 CONFLICT 27 4 1 1DBM ILE L 30 C GB 1589925 VAL 30 CONFLICT 27 5 1 1DBM HIS L 39 ? GB 1589925 GLU 39 CONFLICT 34 6 1 1DBM TYR L 41 ? GB 1589925 PHE 41 CONFLICT 36 7 1 1DBM MET L 53 ? GB 1589925 ILE 53 CONFLICT 48 8 1 1DBM TYR L 61 ? GB 1589925 SER 61 CONFLICT 56 9 1 1DBM ILE L 90 ? GB 1589925 VAL 90 CONFLICT 85 10 1 1DBM PHE L 92 ? GB 1589925 TYR 92 CONFLICT 87 11 1 1DBM SER L 94 ? GB 1589925 PHE 94 CONFLICT 89 12 1 1DBM SER L 96 ? GB 1589925 ALA 96 CONFLICT 91 13 1 1DBM PRO L 101 ? GB 1589925 TRP 101 CONFLICT 96 14 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SIH non-polymer . PROGESTERONE-11-ALPHA-OL-HEMISUCCINATE ? 'C25 H34 O6' 430.534 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1DBM _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.42 _exptl_crystal.density_percent_sol 63.99 _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _refine.entry_id 1DBM _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 6.0 _refine.ls_d_res_high 2.7 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.218 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.218 _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3354 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 31 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 3385 _refine_hist.d_res_high 2.7 _refine_hist.d_res_low 6.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.017 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 3.83 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _struct.entry_id 1DBM _struct.title 'MOLECULAR BASIS OF CROSS-REACTIVITY AND THE LIMITS OF ANTIBODY-ANTIGEN COMPLEMENTARITY' _struct.pdbx_descriptor ;FAB' FRAGMENT OF MONOCLONAL ANTIBODY DB3 (IGG1, SUBGROUP 2A, KAPPA 1) COMPLEXED WITH PROGESTERONE-11-ALPHA-OL-HEMISUCCINATE ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1DBM _struct_keywords.pdbx_keywords IMMUNOGLOBULIN _struct_keywords.text IMMUNOGLOBULIN # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLU A 84 ? LEU A 88 ? GLU L 79 LEU L 83 5 ? 5 HELX_P HELX_P2 2 SER A 126 ? THR A 131 ? SER L 121 THR L 126 1 ? 6 HELX_P HELX_P3 3 LYS A 188 ? ARG A 193 ? LYS L 183 ARG L 188 1 ? 6 HELX_P HELX_P4 4 ALA B 28 ? ASN B 31 ? ALA H 28 ASN H 31 5 ? 4 HELX_P HELX_P5 5 ASP B 62 ? LYS B 65 ? ASP H 61 LYS H 64 5 ? 4 HELX_P HELX_P6 6 THR B 74 ? ALA B 76 ? THR H 73 ALA H 75 5 ? 3 HELX_P HELX_P7 7 LYS B 87 ? THR B 91 ? LYS H 83 THR H 87 5 ? 5 HELX_P HELX_P8 8 SER B 162 ? SER B 164 ? SER H 163 SER H 165 5 ? 3 HELX_P HELX_P9 9 PRO B 206 ? SER B 209 ? PRO H 213 SER H 216 5 ? 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 23 SG ? ? ? 1_555 A CYS 93 SG ? ? L CYS 23 L CYS 88 1_555 ? ? ? ? ? ? ? 2.001 ? disulf2 disulf ? ? A CYS 139 SG ? ? ? 1_555 A CYS 199 SG ? ? L CYS 134 L CYS 194 1_555 ? ? ? ? ? ? ? 2.014 ? disulf3 disulf ? ? B CYS 22 SG ? ? ? 1_555 B CYS 96 SG ? ? H CYS 22 H CYS 92 1_555 ? ? ? ? ? ? ? 1.983 ? disulf4 disulf ? ? B CYS 146 SG ? ? ? 1_555 B CYS 201 SG ? ? H CYS 142 H CYS 208 1_555 ? ? ? ? ? ? ? 2.006 ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ILE 7 A . ? ILE 7 L PRO 8 A ? PRO 8 L 1 6.37 2 VAL 99 A . ? VAL 94 L PRO 100 A ? PRO 95 L 1 -3.20 3 TYR 145 A . ? TYR 140 L PRO 146 A ? PRO 141 L 1 4.32 4 PHE 152 B . ? PHE 148 H PRO 153 B ? PRO 149 H 1 -17.67 5 GLU 154 B . ? GLU 150 H PRO 155 B ? PRO 151 H 1 0.37 6 ARG 194 B . ? ARG 200 H PRO 195 B ? PRO 202 H 1 -5.96 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 6 ? C ? 3 ? D ? 3 ? E ? 3 ? F ? 3 ? G ? 4 ? H ? 5 ? I ? 6 ? J ? 4 ? K ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel F 1 2 ? anti-parallel F 2 3 ? anti-parallel G 1 2 ? anti-parallel G 2 3 ? anti-parallel G 3 4 ? anti-parallel H 1 2 ? anti-parallel H 2 3 ? anti-parallel H 3 4 ? anti-parallel I 1 2 ? anti-parallel I 2 3 ? anti-parallel I 3 4 ? anti-parallel I 4 5 ? anti-parallel I 5 6 ? parallel J 1 2 ? anti-parallel J 2 3 ? anti-parallel J 3 4 ? anti-parallel K 1 2 ? anti-parallel K 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ASN A 58 ? ARG A 59 ? ASN L 53 ARG L 54 A 2 LYS A 50 ? TYR A 54 ? LYS L 45 TYR L 49 A 3 LEU A 38 ? GLN A 43 ? LEU L 33 GLN L 38 A 4 ILE A 90 ? GLN A 95 ? ILE L 85 GLN L 90 A 5 THR A 102 ? PHE A 103 ? THR L 97 PHE L 98 B 1 ASN A 58 ? ARG A 59 ? ASN L 53 ARG L 54 B 2 LYS A 50 ? TYR A 54 ? LYS L 45 TYR L 49 B 3 LEU A 38 ? GLN A 43 ? LEU L 33 GLN L 38 B 4 ILE A 90 ? GLN A 95 ? ILE L 85 GLN L 90 B 5 THR A 107 ? ILE A 111 ? THR L 102 ILE L 106 B 6 SER A 10 ? VAL A 13 ? SER L 10 VAL L 13 C 1 ALA A 19 ? ARG A 24 ? ALA L 19 ARG L 24 C 2 ASP A 75 ? ILE A 80 ? ASP L 70 ILE L 75 C 3 PHE A 67 ? SER A 68 ? PHE L 62 SER L 63 D 1 ALA A 19 ? ARG A 24 ? ALA L 19 ARG L 24 D 2 ASP A 75 ? ILE A 80 ? ASP L 70 ILE L 75 D 3 GLY A 71 ? SER A 72 ? GLY L 66 SER L 67 E 1 THR A 119 ? PHE A 123 ? THR L 114 PHE L 118 E 2 GLY A 134 ? PHE A 144 ? GLY L 129 PHE L 139 E 3 TYR A 178 ? THR A 187 ? TYR L 173 THR L 182 F 1 ASN A 150 ? LYS A 154 ? ASN L 145 LYS L 149 F 2 SER A 196 ? THR A 202 ? SER L 191 THR L 197 F 3 ILE A 210 ? ASN A 215 ? ILE L 205 ASN L 210 G 1 GLN B 3 ? GLN B 6 ? GLN H 3 GLN H 6 G 2 VAL B 18 ? SER B 25 ? VAL H 18 SER H 25 G 3 THR B 78 ? ILE B 83 ? THR H 77 ILE H 82 G 4 ALA B 69 ? GLU B 73 ? ALA H 68 GLU H 72 H 1 GLU B 57 ? TYR B 60 ? GLU H 56 TYR H 59 H 2 LEU B 45 ? ASN B 52 ? LEU H 45 ASN H 52 H 3 GLY B 33 ? GLU B 39 ? GLY H 33 GLU H 39 H 4 ALA B 92 ? GLY B 99 ? ALA H 88 GLY H 95 I 1 GLU B 57 ? TYR B 60 ? GLU H 56 TYR H 59 I 2 LEU B 45 ? ASN B 52 ? LEU H 45 ASN H 52 I 3 GLY B 33 ? GLU B 39 ? GLY H 33 GLU H 39 I 4 ALA B 92 ? GLY B 99 ? ALA H 88 GLY H 95 I 5 THR B 114 ? VAL B 117 ? THR H 108 VAL H 111 I 6 GLU B 10 ? LYS B 12 ? GLU H 10 LYS H 12 J 1 SER B 126 ? LEU B 130 ? SER H 120 LEU H 124 J 2 MET B 141 ? TYR B 151 ? MET H 137 TYR H 147 J 3 LEU B 180 ? PRO B 190 ? LEU H 184 PRO H 194 J 4 VAL B 175 ? GLN B 177 ? VAL H 177 GLN H 179 K 1 THR B 157 ? TRP B 160 ? THR H 153 TRP H 157 K 2 THR B 200 ? HIS B 205 ? THR H 207 HIS H 212 K 3 THR B 210 ? LYS B 215 ? THR H 217 LYS H 222 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ASN A 58 ? O ASN L 53 N TYR A 54 ? N TYR L 49 A 2 3 O MET A 53 ? O MET L 48 N TRP A 40 ? N TRP L 35 A 3 4 N GLN A 43 ? N GLN L 38 O ILE A 90 ? O ILE L 85 A 4 5 N GLN A 95 ? N GLN L 90 O THR A 102 ? O THR L 97 B 1 2 O ASN A 58 ? O ASN L 53 N TYR A 54 ? N TYR L 49 B 2 3 O MET A 53 ? O MET L 48 N TRP A 40 ? N TRP L 35 B 3 4 N GLN A 43 ? N GLN L 38 O ILE A 90 ? O ILE L 85 B 4 5 N TYR A 91 ? N TYR L 86 O THR A 107 ? O THR L 102 B 5 6 N GLU A 110 ? N GLU L 105 O LEU A 11 ? O LEU L 11 C 1 2 N CYS A 23 ? N CYS L 23 O PHE A 76 ? O PHE L 71 C 2 3 N LYS A 79 ? N LYS L 74 O SER A 68 ? O SER L 63 D 1 2 N CYS A 23 ? N CYS L 23 O PHE A 76 ? O PHE L 71 D 2 3 N ASP A 75 ? N ASP L 70 O SER A 72 ? O SER L 67 E 1 2 O PHE A 123 ? O PHE L 118 N VAL A 138 ? N VAL L 133 E 2 3 O PHE A 144 ? O PHE L 139 N TYR A 178 ? N TYR L 173 F 1 2 O LYS A 154 ? O LYS L 149 N THR A 198 ? N THR L 193 F 2 3 O ALA A 201 ? O ALA L 196 N ILE A 210 ? N ILE L 205 G 1 2 N VAL B 5 ? N VAL H 5 O LYS B 23 ? O LYS H 23 G 2 3 O CYS B 22 ? O CYS H 22 N ALA B 79 ? N ALA H 78 G 3 4 O GLU B 82 ? O GLU H 81 N ALA B 69 ? N ALA H 68 H 1 2 N THR B 59 ? N THR H 58 O TRP B 50 ? O TRP H 50 H 2 3 O ILE B 51 ? O ILE H 51 N VAL B 34 ? N VAL H 34 H 3 4 O GLU B 39 ? O GLU H 39 N THR B 93 ? N THR H 89 I 1 2 N THR B 59 ? N THR H 58 O TRP B 50 ? O TRP H 50 I 2 3 O ILE B 51 ? O ILE H 51 N VAL B 34 ? N VAL H 34 I 3 4 O GLU B 39 ? O GLU H 39 N THR B 93 ? N THR H 89 I 4 5 O ALA B 92 ? O ALA H 88 N VAL B 115 ? N VAL H 109 I 5 6 N THR B 116 ? N THR H 110 O GLU B 10 ? O GLU H 10 J 1 2 N LEU B 130 ? N LEU H 124 O GLY B 145 ? O GLY H 141 J 2 3 O TYR B 151 ? O TYR H 147 N TYR B 181 ? N TYR H 185 J 3 4 O THR B 182 ? O THR H 186 N VAL B 175 ? N VAL H 177 K 1 2 O THR B 159 ? O THR H 156 N ASN B 202 ? N ASN H 209 K 2 3 N HIS B 205 ? N HIS H 212 O THR B 210 ? O THR H 217 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id ? _struct_site.pdbx_auth_comp_id ? _struct_site.pdbx_auth_seq_id ? _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 11 _struct_site.details 'BINDING SITE FOR RESIDUE SIH H 229' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 11 GLY B 33 ? GLY H 33 . ? 1_555 ? 2 AC1 11 ASN B 35 ? ASN H 35 . ? 1_555 ? 3 AC1 11 TRP B 50 ? TRP H 50 . ? 1_555 ? 4 AC1 11 GLY B 99 ? GLY H 95 . ? 1_555 ? 5 AC1 11 ASP B 100 ? ASP H 96 . ? 1_555 ? 6 AC1 11 TYR B 101 ? TYR H 97 . ? 1_555 ? 7 AC1 11 TRP B 104 ? TRP H 100 . ? 1_555 ? 8 AC1 11 PHE B 106 B PHE H 100 . ? 1_555 ? 9 AC1 11 HIS A 31 D HIS L 27 . ? 1_555 ? 10 AC1 11 SER A 97 ? SER L 92 . ? 1_555 ? 11 AC1 11 VAL A 99 ? VAL L 94 . ? 1_555 ? # _database_PDB_matrix.entry_id 1DBM _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1DBM _atom_sites.fract_transf_matrix[1][1] 0.007421 _atom_sites.fract_transf_matrix[1][2] 0.004284 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.008569 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008051 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_sites_footnote.id _atom_sites_footnote.text 1 'CIS PROLINE - PRO L 8' 2 'CIS PROLINE - PRO L 95' 3 'CIS PROLINE - PRO L 141' 4 'CIS PROLINE - PRO H 149' 5 'CIS PROLINE - PRO H 151' 6 'CIS PROLINE - PRO H 202' # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASP 1 1 1 ASP ASP L . n A 1 2 VAL 2 2 2 VAL VAL L . n A 1 3 VAL 3 3 3 VAL VAL L . n A 1 4 MET 4 4 4 MET MET L . n A 1 5 THR 5 5 5 THR THR L . n A 1 6 GLN 6 6 6 GLN GLN L . n A 1 7 ILE 7 7 7 ILE ILE L . n A 1 8 PRO 8 8 8 PRO PRO L . n A 1 9 LEU 9 9 9 LEU LEU L . n A 1 10 SER 10 10 10 SER SER L . n A 1 11 LEU 11 11 11 LEU LEU L . n A 1 12 PRO 12 12 12 PRO PRO L . n A 1 13 VAL 13 13 13 VAL VAL L . n A 1 14 ASN 14 14 14 ASN ASN L . n A 1 15 LEU 15 15 15 LEU LEU L . n A 1 16 GLY 16 16 16 GLY GLY L . n A 1 17 ASP 17 17 17 ASP ASP L . n A 1 18 GLN 18 18 18 GLN GLN L . n A 1 19 ALA 19 19 19 ALA ALA L . n A 1 20 SER 20 20 20 SER SER L . n A 1 21 ILE 21 21 21 ILE ILE L . n A 1 22 SER 22 22 22 SER SER L . n A 1 23 CYS 23 23 23 CYS CYS L . n A 1 24 ARG 24 24 24 ARG ARG L . n A 1 25 SER 25 25 25 SER SER L . n A 1 26 SER 26 26 26 SER SER L . n A 1 27 GLN 27 27 27 GLN GLN L . n A 1 28 SER 28 27 27 SER SER L A n A 1 29 LEU 29 27 27 LEU LEU L B n A 1 30 ILE 30 27 27 ILE ILE L C n A 1 31 HIS 31 27 27 HIS HIS L D n A 1 32 SER 32 27 27 SER SER L E n A 1 33 ASN 33 28 28 ASN ASN L . n A 1 34 GLY 34 29 29 GLY GLY L . n A 1 35 ASN 35 30 30 ASN ASN L . n A 1 36 THR 36 31 31 THR THR L . n A 1 37 TYR 37 32 32 TYR TYR L . n A 1 38 LEU 38 33 33 LEU LEU L . n A 1 39 HIS 39 34 34 HIS HIS L . n A 1 40 TRP 40 35 35 TRP TRP L . n A 1 41 TYR 41 36 36 TYR TYR L . n A 1 42 LEU 42 37 37 LEU LEU L . n A 1 43 GLN 43 38 38 GLN GLN L . n A 1 44 LYS 44 39 39 LYS LYS L . n A 1 45 PRO 45 40 40 PRO PRO L . n A 1 46 GLY 46 41 41 GLY GLY L . n A 1 47 GLN 47 42 42 GLN GLN L . n A 1 48 SER 48 43 43 SER SER L . n A 1 49 PRO 49 44 44 PRO PRO L . n A 1 50 LYS 50 45 45 LYS LYS L . n A 1 51 LEU 51 46 46 LEU LEU L . n A 1 52 LEU 52 47 47 LEU LEU L . n A 1 53 MET 53 48 48 MET MET L . n A 1 54 TYR 54 49 49 TYR TYR L . n A 1 55 LYS 55 50 50 LYS LYS L . n A 1 56 VAL 56 51 51 VAL VAL L . n A 1 57 SER 57 52 52 SER SER L . n A 1 58 ASN 58 53 53 ASN ASN L . n A 1 59 ARG 59 54 54 ARG ARG L . n A 1 60 PHE 60 55 55 PHE PHE L . n A 1 61 TYR 61 56 56 TYR TYR L . n A 1 62 GLY 62 57 57 GLY GLY L . n A 1 63 VAL 63 58 58 VAL VAL L . n A 1 64 PRO 64 59 59 PRO PRO L . n A 1 65 ASP 65 60 60 ASP ASP L . n A 1 66 ARG 66 61 61 ARG ARG L . n A 1 67 PHE 67 62 62 PHE PHE L . n A 1 68 SER 68 63 63 SER SER L . n A 1 69 GLY 69 64 64 GLY GLY L . n A 1 70 SER 70 65 65 SER SER L . n A 1 71 GLY 71 66 66 GLY GLY L . n A 1 72 SER 72 67 67 SER SER L . n A 1 73 GLY 73 68 68 GLY GLY L . n A 1 74 THR 74 69 69 THR THR L . n A 1 75 ASP 75 70 70 ASP ASP L . n A 1 76 PHE 76 71 71 PHE PHE L . n A 1 77 THR 77 72 72 THR THR L . n A 1 78 LEU 78 73 73 LEU LEU L . n A 1 79 LYS 79 74 74 LYS LYS L . n A 1 80 ILE 80 75 75 ILE ILE L . n A 1 81 SER 81 76 76 SER SER L . n A 1 82 ARG 82 77 77 ARG ARG L . n A 1 83 VAL 83 78 78 VAL VAL L . n A 1 84 GLU 84 79 79 GLU GLU L . n A 1 85 ALA 85 80 80 ALA ALA L . n A 1 86 GLU 86 81 81 GLU GLU L . n A 1 87 ASP 87 82 82 ASP ASP L . n A 1 88 LEU 88 83 83 LEU LEU L . n A 1 89 GLY 89 84 84 GLY GLY L . n A 1 90 ILE 90 85 85 ILE ILE L . n A 1 91 TYR 91 86 86 TYR TYR L . n A 1 92 PHE 92 87 87 PHE PHE L . n A 1 93 CYS 93 88 88 CYS CYS L . n A 1 94 SER 94 89 89 SER SER L . n A 1 95 GLN 95 90 90 GLN GLN L . n A 1 96 SER 96 91 91 SER SER L . n A 1 97 SER 97 92 92 SER SER L . n A 1 98 HIS 98 93 93 HIS HIS L . n A 1 99 VAL 99 94 94 VAL VAL L . n A 1 100 PRO 100 95 95 PRO PRO L . n A 1 101 PRO 101 96 96 PRO PRO L . n A 1 102 THR 102 97 97 THR THR L . n A 1 103 PHE 103 98 98 PHE PHE L . n A 1 104 GLY 104 99 99 GLY GLY L . n A 1 105 GLY 105 100 100 GLY GLY L . n A 1 106 GLY 106 101 101 GLY GLY L . n A 1 107 THR 107 102 102 THR THR L . n A 1 108 LYS 108 103 103 LYS LYS L . n A 1 109 LEU 109 104 104 LEU LEU L . n A 1 110 GLU 110 105 105 GLU GLU L . n A 1 111 ILE 111 106 106 ILE ILE L . n A 1 112 LYS 112 107 107 LYS LYS L . n A 1 113 ARG 113 108 108 ARG ARG L . n A 1 114 ALA 114 109 109 ALA ALA L . n A 1 115 ASP 115 110 110 ASP ASP L . n A 1 116 ALA 116 111 111 ALA ALA L . n A 1 117 ALA 117 112 112 ALA ALA L . n A 1 118 PRO 118 113 113 PRO PRO L . n A 1 119 THR 119 114 114 THR THR L . n A 1 120 VAL 120 115 115 VAL VAL L . n A 1 121 SER 121 116 116 SER SER L . n A 1 122 ILE 122 117 117 ILE ILE L . n A 1 123 PHE 123 118 118 PHE PHE L . n A 1 124 PRO 124 119 119 PRO PRO L . n A 1 125 PRO 125 120 120 PRO PRO L . n A 1 126 SER 126 121 121 SER SER L . n A 1 127 SER 127 122 122 SER SER L . n A 1 128 GLU 128 123 123 GLU GLU L . n A 1 129 GLN 129 124 124 GLN GLN L . n A 1 130 LEU 130 125 125 LEU LEU L . n A 1 131 THR 131 126 126 THR THR L . n A 1 132 SER 132 127 127 SER SER L . n A 1 133 GLY 133 128 128 GLY GLY L . n A 1 134 GLY 134 129 129 GLY GLY L . n A 1 135 ALA 135 130 130 ALA ALA L . n A 1 136 SER 136 131 131 SER SER L . n A 1 137 VAL 137 132 132 VAL VAL L . n A 1 138 VAL 138 133 133 VAL VAL L . n A 1 139 CYS 139 134 134 CYS CYS L . n A 1 140 PHE 140 135 135 PHE PHE L . n A 1 141 LEU 141 136 136 LEU LEU L . n A 1 142 ASN 142 137 137 ASN ASN L . n A 1 143 ASN 143 138 138 ASN ASN L . n A 1 144 PHE 144 139 139 PHE PHE L . n A 1 145 TYR 145 140 140 TYR TYR L . n A 1 146 PRO 146 141 141 PRO PRO L . n A 1 147 LYS 147 142 142 LYS LYS L . n A 1 148 ASP 148 143 143 ASP ASP L . n A 1 149 ILE 149 144 144 ILE ILE L . n A 1 150 ASN 150 145 145 ASN ASN L . n A 1 151 VAL 151 146 146 VAL VAL L . n A 1 152 LYS 152 147 147 LYS LYS L . n A 1 153 TRP 153 148 148 TRP TRP L . n A 1 154 LYS 154 149 149 LYS LYS L . n A 1 155 ILE 155 150 150 ILE ILE L . n A 1 156 ASP 156 151 151 ASP ASP L . n A 1 157 GLY 157 152 152 GLY GLY L . n A 1 158 SER 158 153 153 SER SER L . n A 1 159 GLU 159 154 154 GLU GLU L . n A 1 160 ARG 160 155 155 ARG ARG L . n A 1 161 GLN 161 156 156 GLN GLN L . n A 1 162 ASN 162 157 157 ASN ASN L . n A 1 163 GLY 163 158 158 GLY GLY L . n A 1 164 VAL 164 159 159 VAL VAL L . n A 1 165 LEU 165 160 160 LEU LEU L . n A 1 166 ASN 166 161 161 ASN ASN L . n A 1 167 SER 167 162 162 SER SER L . n A 1 168 TRP 168 163 163 TRP TRP L . n A 1 169 THR 169 164 164 THR THR L . n A 1 170 ASP 170 165 165 ASP ASP L . n A 1 171 GLN 171 166 166 GLN GLN L . n A 1 172 ASP 172 167 167 ASP ASP L . n A 1 173 SER 173 168 168 SER SER L . n A 1 174 LYS 174 169 169 LYS LYS L . n A 1 175 ASP 175 170 170 ASP ASP L . n A 1 176 SER 176 171 171 SER SER L . n A 1 177 THR 177 172 172 THR THR L . n A 1 178 TYR 178 173 173 TYR TYR L . n A 1 179 SER 179 174 174 SER SER L . n A 1 180 MET 180 175 175 MET MET L . n A 1 181 SER 181 176 176 SER SER L . n A 1 182 SER 182 177 177 SER SER L . n A 1 183 THR 183 178 178 THR THR L . n A 1 184 LEU 184 179 179 LEU LEU L . n A 1 185 THR 185 180 180 THR THR L . n A 1 186 LEU 186 181 181 LEU LEU L . n A 1 187 THR 187 182 182 THR THR L . n A 1 188 LYS 188 183 183 LYS LYS L . n A 1 189 ASP 189 184 184 ASP ASP L . n A 1 190 GLU 190 185 185 GLU GLU L . n A 1 191 TYR 191 186 186 TYR TYR L . n A 1 192 GLU 192 187 187 GLU GLU L . n A 1 193 ARG 193 188 188 ARG ARG L . n A 1 194 HIS 194 189 189 HIS HIS L . n A 1 195 ASN 195 190 190 ASN ASN L . n A 1 196 SER 196 191 191 SER SER L . n A 1 197 TYR 197 192 192 TYR TYR L . n A 1 198 THR 198 193 193 THR THR L . n A 1 199 CYS 199 194 194 CYS CYS L . n A 1 200 GLU 200 195 195 GLU GLU L . n A 1 201 ALA 201 196 196 ALA ALA L . n A 1 202 THR 202 197 197 THR THR L . n A 1 203 HIS 203 198 198 HIS HIS L . n A 1 204 LYS 204 199 199 LYS LYS L . n A 1 205 THR 205 200 200 THR THR L . n A 1 206 SER 206 201 201 SER SER L . n A 1 207 THR 207 202 202 THR THR L . n A 1 208 SER 208 203 203 SER SER L . n A 1 209 PRO 209 204 204 PRO PRO L . n A 1 210 ILE 210 205 205 ILE ILE L . n A 1 211 VAL 211 206 206 VAL VAL L . n A 1 212 LYS 212 207 207 LYS LYS L . n A 1 213 SER 213 208 208 SER SER L . n A 1 214 PHE 214 209 209 PHE PHE L . n A 1 215 ASN 215 210 210 ASN ASN L . n A 1 216 ARG 216 211 211 ARG ARG L . n B 2 1 GLN 1 1 1 GLN GLN H . n B 2 2 ILE 2 2 2 ILE ILE H . n B 2 3 GLN 3 3 3 GLN GLN H . n B 2 4 LEU 4 4 4 LEU LEU H . n B 2 5 VAL 5 5 5 VAL VAL H . n B 2 6 GLN 6 6 6 GLN GLN H . n B 2 7 SER 7 7 7 SER SER H . n B 2 8 GLY 8 8 8 GLY GLY H . n B 2 9 PRO 9 9 9 PRO PRO H . n B 2 10 GLU 10 10 10 GLU GLU H . n B 2 11 LEU 11 11 11 LEU LEU H . n B 2 12 LYS 12 12 12 LYS LYS H . n B 2 13 LYS 13 13 13 LYS LYS H . n B 2 14 PRO 14 14 14 PRO PRO H . n B 2 15 GLY 15 15 15 GLY GLY H . n B 2 16 GLU 16 16 16 GLU GLU H . n B 2 17 THR 17 17 17 THR THR H . n B 2 18 VAL 18 18 18 VAL VAL H . n B 2 19 LYS 19 19 19 LYS LYS H . n B 2 20 ILE 20 20 20 ILE ILE H . n B 2 21 SER 21 21 21 SER SER H . n B 2 22 CYS 22 22 22 CYS CYS H . n B 2 23 LYS 23 23 23 LYS LYS H . n B 2 24 ALA 24 24 24 ALA ALA H . n B 2 25 SER 25 25 25 SER SER H . n B 2 26 GLY 26 26 26 GLY GLY H . n B 2 27 TYR 27 27 27 TYR TYR H . n B 2 28 ALA 28 28 28 ALA ALA H . n B 2 29 PHE 29 29 29 PHE PHE H . n B 2 30 THR 30 30 30 THR THR H . n B 2 31 ASN 31 31 31 ASN ASN H . n B 2 32 TYR 32 32 32 TYR TYR H . n B 2 33 GLY 33 33 33 GLY GLY H . n B 2 34 VAL 34 34 34 VAL VAL H . n B 2 35 ASN 35 35 35 ASN ASN H . n B 2 36 TRP 36 36 36 TRP TRP H . n B 2 37 VAL 37 37 37 VAL VAL H . n B 2 38 LYS 38 38 38 LYS LYS H . n B 2 39 GLU 39 39 39 GLU GLU H . n B 2 40 ALA 40 40 40 ALA ALA H . n B 2 41 PRO 41 41 41 PRO PRO H . n B 2 42 GLY 42 42 42 GLY GLY H . n B 2 43 LYS 43 43 43 LYS LYS H . n B 2 44 GLU 44 44 44 GLU GLU H . n B 2 45 LEU 45 45 45 LEU LEU H . n B 2 46 LYS 46 46 46 LYS LYS H . n B 2 47 TRP 47 47 47 TRP TRP H . n B 2 48 MET 48 48 48 MET MET H . n B 2 49 GLY 49 49 49 GLY GLY H . n B 2 50 TRP 50 50 50 TRP TRP H . n B 2 51 ILE 51 51 51 ILE ILE H . n B 2 52 ASN 52 52 52 ASN ASN H . n B 2 53 ILE 53 52 52 ILE ILE H A n B 2 54 TYR 54 53 53 TYR TYR H . n B 2 55 THR 55 54 54 THR THR H . n B 2 56 GLY 56 55 55 GLY GLY H . n B 2 57 GLU 57 56 56 GLU GLU H . n B 2 58 PRO 58 57 57 PRO PRO H . n B 2 59 THR 59 58 58 THR THR H . n B 2 60 TYR 60 59 59 TYR TYR H . n B 2 61 VAL 61 60 60 VAL VAL H . n B 2 62 ASP 62 61 61 ASP ASP H . n B 2 63 ASP 63 62 62 ASP ASP H . n B 2 64 PHE 64 63 63 PHE PHE H . n B 2 65 LYS 65 64 64 LYS LYS H . n B 2 66 GLY 66 65 65 GLY GLY H . n B 2 67 ARG 67 66 66 ARG ARG H . n B 2 68 PHE 68 67 67 PHE PHE H . n B 2 69 ALA 69 68 68 ALA ALA H . n B 2 70 PHE 70 69 69 PHE PHE H . n B 2 71 SER 71 70 70 SER SER H . n B 2 72 LEU 72 71 71 LEU LEU H . n B 2 73 GLU 73 72 72 GLU GLU H . n B 2 74 THR 74 73 73 THR THR H . n B 2 75 SER 75 74 74 SER SER H . n B 2 76 ALA 76 75 75 ALA ALA H . n B 2 77 SER 77 76 76 SER SER H . n B 2 78 THR 78 77 77 THR THR H . n B 2 79 ALA 79 78 78 ALA ALA H . n B 2 80 TYR 80 79 79 TYR TYR H . n B 2 81 LEU 81 80 80 LEU LEU H . n B 2 82 GLU 82 81 81 GLU GLU H . n B 2 83 ILE 83 82 82 ILE ILE H . n B 2 84 ASN 84 82 82 ASN ASN H A n B 2 85 ASN 85 82 82 ASN ASN H B n B 2 86 LEU 86 82 82 LEU LEU H C n B 2 87 LYS 87 83 83 LYS LYS H . n B 2 88 ASN 88 84 84 ASN ASN H . n B 2 89 GLU 89 85 85 GLU GLU H . n B 2 90 ASP 90 86 86 ASP ASP H . n B 2 91 THR 91 87 87 THR THR H . n B 2 92 ALA 92 88 88 ALA ALA H . n B 2 93 THR 93 89 89 THR THR H . n B 2 94 TYR 94 90 90 TYR TYR H . n B 2 95 PHE 95 91 91 PHE PHE H . n B 2 96 CYS 96 92 92 CYS CYS H . n B 2 97 THR 97 93 93 THR THR H . n B 2 98 ARG 98 94 94 ARG ARG H . n B 2 99 GLY 99 95 95 GLY GLY H . n B 2 100 ASP 100 96 96 ASP ASP H . n B 2 101 TYR 101 97 97 TYR TYR H . n B 2 102 VAL 102 98 98 VAL VAL H . n B 2 103 ASN 103 99 99 ASN ASN H . n B 2 104 TRP 104 100 100 TRP TRP H . n B 2 105 TYR 105 100 100 TYR TYR H A n B 2 106 PHE 106 100 100 PHE PHE H B n B 2 107 ASP 107 101 101 ASP ASP H . n B 2 108 VAL 108 102 102 VAL VAL H . n B 2 109 TRP 109 103 103 TRP TRP H . n B 2 110 GLY 110 104 104 GLY GLY H . n B 2 111 ALA 111 105 105 ALA ALA H . n B 2 112 GLY 112 106 106 GLY GLY H . n B 2 113 THR 113 107 107 THR THR H . n B 2 114 THR 114 108 108 THR THR H . n B 2 115 VAL 115 109 109 VAL VAL H . n B 2 116 THR 116 110 110 THR THR H . n B 2 117 VAL 117 111 111 VAL VAL H . n B 2 118 SER 118 112 112 SER SER H . n B 2 119 SER 119 113 113 SER SER H . n B 2 120 ALA 120 114 114 ALA ALA H . n B 2 121 LYS 121 115 115 LYS LYS H . n B 2 122 THR 122 116 116 THR THR H . n B 2 123 THR 123 117 117 THR THR H . n B 2 124 PRO 124 118 118 PRO PRO H . n B 2 125 PRO 125 119 119 PRO PRO H . n B 2 126 SER 126 120 120 SER SER H . n B 2 127 VAL 127 121 121 VAL VAL H . n B 2 128 TYR 128 122 122 TYR TYR H . n B 2 129 PRO 129 123 123 PRO PRO H . n B 2 130 LEU 130 124 124 LEU LEU H . n B 2 131 ALA 131 125 125 ALA ALA H . n B 2 132 PRO 132 126 126 PRO PRO H . n B 2 133 GLY 133 127 127 GLY GLY H . n B 2 134 SER 134 128 128 SER SER H . n B 2 135 ALA 135 129 129 ALA ALA H . n B 2 136 ALA 136 130 130 ALA ALA H . n B 2 137 GLN 137 133 133 GLN GLN H . n B 2 138 THR 138 134 134 THR THR H . n B 2 139 ASN 139 135 135 ASN ASN H . n B 2 140 SER 140 136 136 SER SER H . n B 2 141 MET 141 137 137 MET MET H . n B 2 142 VAL 142 138 138 VAL VAL H . n B 2 143 THR 143 139 139 THR THR H . n B 2 144 LEU 144 140 140 LEU LEU H . n B 2 145 GLY 145 141 141 GLY GLY H . n B 2 146 CYS 146 142 142 CYS CYS H . n B 2 147 LEU 147 143 143 LEU LEU H . n B 2 148 VAL 148 144 144 VAL VAL H . n B 2 149 LYS 149 145 145 LYS LYS H . n B 2 150 GLY 150 146 146 GLY GLY H . n B 2 151 TYR 151 147 147 TYR TYR H . n B 2 152 PHE 152 148 148 PHE PHE H . n B 2 153 PRO 153 149 149 PRO PRO H . n B 2 154 GLU 154 150 150 GLU GLU H . n B 2 155 PRO 155 151 151 PRO PRO H . n B 2 156 VAL 156 152 152 VAL VAL H . n B 2 157 THR 157 153 153 THR THR H . n B 2 158 VAL 158 154 154 VAL VAL H . n B 2 159 THR 159 156 156 THR THR H . n B 2 160 TRP 160 157 157 TRP TRP H . n B 2 161 ASN 161 162 162 ASN ASN H . n B 2 162 SER 162 163 163 SER SER H . n B 2 163 GLY 163 164 164 GLY GLY H . n B 2 164 SER 164 165 165 SER SER H . n B 2 165 LEU 165 166 166 LEU LEU H . n B 2 166 SER 166 167 167 SER SER H . n B 2 167 SER 167 168 168 SER SER H . n B 2 168 GLY 168 169 169 GLY GLY H . n B 2 169 VAL 169 171 171 VAL VAL H . n B 2 170 HIS 170 172 172 HIS HIS H . n B 2 171 THR 171 173 173 THR THR H . n B 2 172 PHE 172 174 174 PHE PHE H . n B 2 173 PRO 173 175 175 PRO PRO H . n B 2 174 ALA 174 176 176 ALA ALA H . n B 2 175 VAL 175 177 177 VAL VAL H . n B 2 176 LEU 176 178 178 LEU LEU H . n B 2 177 GLN 177 179 179 GLN GLN H . n B 2 178 SER 178 180 180 SER SER H . n B 2 179 ASP 179 183 183 ASP ASP H . n B 2 180 LEU 180 184 184 LEU LEU H . n B 2 181 TYR 181 185 185 TYR TYR H . n B 2 182 THR 182 186 186 THR THR H . n B 2 183 LEU 183 187 187 LEU LEU H . n B 2 184 SER 184 188 188 SER SER H . n B 2 185 SER 185 189 189 SER SER H . n B 2 186 SER 186 190 190 SER SER H . n B 2 187 VAL 187 191 191 VAL VAL H . n B 2 188 THR 188 192 192 THR THR H . n B 2 189 VAL 189 193 193 VAL VAL H . n B 2 190 PRO 190 194 194 PRO PRO H . n B 2 191 SER 191 195 195 SER SER H . n B 2 192 SER 192 196 196 SER SER H . n B 2 193 PRO 193 199 199 PRO PRO H . n B 2 194 ARG 194 200 200 ARG ARG H . n B 2 195 PRO 195 202 202 PRO PRO H . n B 2 196 SER 196 203 203 SER SER H . n B 2 197 GLU 197 204 204 GLU GLU H . n B 2 198 THR 198 205 205 THR THR H . n B 2 199 VAL 199 206 206 VAL VAL H . n B 2 200 THR 200 207 207 THR THR H . n B 2 201 CYS 201 208 208 CYS CYS H . n B 2 202 ASN 202 209 209 ASN ASN H . n B 2 203 VAL 203 210 210 VAL VAL H . n B 2 204 ALA 204 211 211 ALA ALA H . n B 2 205 HIS 205 212 212 HIS HIS H . n B 2 206 PRO 206 213 213 PRO PRO H . n B 2 207 ALA 207 214 214 ALA ALA H . n B 2 208 SER 208 215 215 SER SER H . n B 2 209 SER 209 216 216 SER SER H . n B 2 210 THR 210 217 217 THR THR H . n B 2 211 LYS 211 218 218 LYS LYS H . n B 2 212 VAL 212 219 219 VAL VAL H . n B 2 213 ASP 213 220 220 ASP ASP H . n B 2 214 LYS 214 221 221 LYS LYS H . n B 2 215 LYS 215 222 222 LYS LYS H . n B 2 216 ILE 216 223 223 ILE ILE H . n B 2 217 VAL 217 226 226 VAL VAL H . n B 2 218 PRO 218 227 227 PRO PRO H . n B 2 219 ARG 219 228 228 ARG ARG H . n # _pdbx_nonpoly_scheme.asym_id C _pdbx_nonpoly_scheme.entity_id 3 _pdbx_nonpoly_scheme.mon_id SIH _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 229 _pdbx_nonpoly_scheme.auth_seq_num 1 _pdbx_nonpoly_scheme.pdb_mon_id SIH _pdbx_nonpoly_scheme.auth_mon_id SIH _pdbx_nonpoly_scheme.pdb_strand_id H _pdbx_nonpoly_scheme.pdb_ins_code . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4370 ? 1 MORE -23 ? 1 'SSA (A^2)' 19560 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1994-01-31 2 'Structure model' 1 1 2008-03-24 3 'Structure model' 1 2 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal X-PLOR 'model building' . ? 1 X-PLOR refinement . ? 2 X-PLOR phasing . ? 3 # _pdbx_entry_details.entry_id 1DBM _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ;THE PROGESTERONE 11-ALPHA-OL-HEMISUCCINATE MOLECULE (SIH) IS LOCATED BETWEEN THE COMPLEMENTARITY-DETERMINING REGIONS L1, L3, H1, H2 AND H3. ; _pdbx_entry_details.sequence_details ? # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 NE2 L HIS 34 ? ? CD2 L HIS 34 ? ? 1.303 1.373 -0.070 0.011 N 2 1 NE2 L HIS 93 ? ? CD2 L HIS 93 ? ? 1.305 1.373 -0.068 0.011 N 3 1 NE2 L HIS 189 ? ? CD2 L HIS 189 ? ? 1.290 1.373 -0.083 0.011 N 4 1 NE2 L HIS 198 ? ? CD2 L HIS 198 ? ? 1.292 1.373 -0.081 0.011 N 5 1 NE2 H HIS 172 ? ? CD2 H HIS 172 ? ? 1.303 1.373 -0.070 0.011 N 6 1 NE2 H HIS 212 ? ? CD2 H HIS 212 ? ? 1.291 1.373 -0.082 0.011 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CA L ILE 7 ? ? CB L ILE 7 ? ? CG2 L ILE 7 ? ? 98.77 110.90 -12.13 2.00 N 2 1 NE L ARG 24 ? ? CZ L ARG 24 ? ? NH2 L ARG 24 ? ? 116.58 120.30 -3.72 0.50 N 3 1 CB L HIS 27 D ? CG L HIS 27 D ? CD2 L HIS 27 D ? 119.77 129.70 -9.93 1.60 N 4 1 CD1 L TRP 35 ? ? CG L TRP 35 ? ? CD2 L TRP 35 ? ? 111.16 106.30 4.86 0.80 N 5 1 CE2 L TRP 35 ? ? CD2 L TRP 35 ? ? CE3 L TRP 35 ? ? 126.49 118.70 7.79 1.20 N 6 1 CA L LEU 46 ? ? CB L LEU 46 ? ? CG L LEU 46 ? ? 131.67 115.30 16.37 2.30 N 7 1 CB L TYR 49 ? ? CG L TYR 49 ? ? CD1 L TYR 49 ? ? 116.96 121.00 -4.04 0.60 N 8 1 NE L ARG 77 ? ? CZ L ARG 77 ? ? NH2 L ARG 77 ? ? 116.73 120.30 -3.57 0.50 N 9 1 NE L ARG 108 ? ? CZ L ARG 108 ? ? NH1 L ARG 108 ? ? 125.59 120.30 5.29 0.50 N 10 1 NE L ARG 108 ? ? CZ L ARG 108 ? ? NH2 L ARG 108 ? ? 117.21 120.30 -3.09 0.50 N 11 1 CA L GLU 123 ? ? CB L GLU 123 ? ? CG L GLU 123 ? ? 129.72 113.40 16.32 2.20 N 12 1 CD1 L TRP 148 ? ? CG L TRP 148 ? ? CD2 L TRP 148 ? ? 112.83 106.30 6.53 0.80 N 13 1 CE2 L TRP 148 ? ? CD2 L TRP 148 ? ? CG L TRP 148 ? ? 100.96 107.30 -6.34 0.80 N 14 1 CG L TRP 148 ? ? CD2 L TRP 148 ? ? CE3 L TRP 148 ? ? 141.05 133.90 7.15 0.90 N 15 1 CD1 L TRP 163 ? ? CG L TRP 163 ? ? CD2 L TRP 163 ? ? 112.24 106.30 5.94 0.80 N 16 1 CE2 L TRP 163 ? ? CD2 L TRP 163 ? ? CG L TRP 163 ? ? 101.80 107.30 -5.50 0.80 N 17 1 CA L MET 175 ? ? CB L MET 175 ? ? CG L MET 175 ? ? 125.69 113.30 12.39 1.70 N 18 1 N L ASP 184 ? ? CA L ASP 184 ? ? CB L ASP 184 ? ? 99.44 110.60 -11.16 1.80 N 19 1 CB L TYR 186 ? ? CG L TYR 186 ? ? CD2 L TYR 186 ? ? 117.10 121.00 -3.90 0.60 N 20 1 N H GLN 1 ? ? CA H GLN 1 ? ? C H GLN 1 ? ? 92.37 111.00 -18.63 2.70 N 21 1 CD1 H TRP 36 ? ? CG H TRP 36 ? ? CD2 H TRP 36 ? ? 111.89 106.30 5.59 0.80 N 22 1 CE2 H TRP 36 ? ? CD2 H TRP 36 ? ? CG H TRP 36 ? ? 101.97 107.30 -5.33 0.80 N 23 1 CD1 H TRP 47 ? ? CG H TRP 47 ? ? CD2 H TRP 47 ? ? 113.90 106.30 7.60 0.80 N 24 1 CB H TRP 47 ? ? CG H TRP 47 ? ? CD1 H TRP 47 ? ? 119.12 127.00 -7.88 1.30 N 25 1 CG H TRP 47 ? ? CD1 H TRP 47 ? ? NE1 H TRP 47 ? ? 103.70 110.10 -6.40 1.00 N 26 1 CE2 H TRP 47 ? ? CD2 H TRP 47 ? ? CG H TRP 47 ? ? 100.65 107.30 -6.65 0.80 N 27 1 CG H TRP 47 ? ? CD2 H TRP 47 ? ? CE3 H TRP 47 ? ? 140.90 133.90 7.00 0.90 N 28 1 CD1 H TRP 50 ? ? CG H TRP 50 ? ? CD2 H TRP 50 ? ? 111.62 106.30 5.32 0.80 N 29 1 NE1 H TRP 50 ? ? CE2 H TRP 50 ? ? CD2 H TRP 50 ? ? 114.06 107.30 6.76 1.00 N 30 1 CE2 H TRP 50 ? ? CD2 H TRP 50 ? ? CG H TRP 50 ? ? 100.65 107.30 -6.65 0.80 N 31 1 NE H ARG 66 ? ? CZ H ARG 66 ? ? NH1 H ARG 66 ? ? 124.07 120.30 3.77 0.50 N 32 1 NE H ARG 66 ? ? CZ H ARG 66 ? ? NH2 H ARG 66 ? ? 117.18 120.30 -3.12 0.50 N 33 1 CA H CYS 92 ? ? CB H CYS 92 ? ? SG H CYS 92 ? ? 121.15 114.20 6.95 1.10 N 34 1 CB H ARG 94 ? ? CG H ARG 94 ? ? CD H ARG 94 ? ? 93.11 111.60 -18.49 2.60 N 35 1 CD1 H TRP 100 ? ? CG H TRP 100 ? ? CD2 H TRP 100 ? ? 113.69 106.30 7.39 0.80 N 36 1 CE2 H TRP 100 ? ? CD2 H TRP 100 ? ? CG H TRP 100 ? ? 101.15 107.30 -6.15 0.80 N 37 1 CG H TRP 100 ? ? CD2 H TRP 100 ? ? CE3 H TRP 100 ? ? 139.47 133.90 5.57 0.90 N 38 1 CB H TYR 100 A ? CG H TYR 100 A ? CD2 H TYR 100 A ? 113.99 121.00 -7.01 0.60 N 39 1 CB H TYR 100 A ? CG H TYR 100 A ? CD1 H TYR 100 A ? 126.41 121.00 5.41 0.60 N 40 1 CD1 H TRP 103 ? ? CG H TRP 103 ? ? CD2 H TRP 103 ? ? 112.96 106.30 6.66 0.80 N 41 1 CE2 H TRP 103 ? ? CD2 H TRP 103 ? ? CG H TRP 103 ? ? 101.44 107.30 -5.86 0.80 N 42 1 CG H TRP 103 ? ? CD2 H TRP 103 ? ? CE3 H TRP 103 ? ? 139.99 133.90 6.09 0.90 N 43 1 CG1 H VAL 109 ? ? CB H VAL 109 ? ? CG2 H VAL 109 ? ? 101.08 110.90 -9.82 1.60 N 44 1 CD1 H TRP 157 ? ? CG H TRP 157 ? ? CD2 H TRP 157 ? ? 112.33 106.30 6.03 0.80 N 45 1 CE2 H TRP 157 ? ? CD2 H TRP 157 ? ? CG H TRP 157 ? ? 101.52 107.30 -5.78 0.80 N 46 1 CA H LEU 187 ? ? CB H LEU 187 ? ? CG H LEU 187 ? ? 130.79 115.30 15.49 2.30 N 47 1 CA H VAL 193 ? ? CB H VAL 193 ? ? CG1 H VAL 193 ? ? 100.13 110.90 -10.77 1.50 N 48 1 NE H ARG 200 ? ? CZ H ARG 200 ? ? NH1 H ARG 200 ? ? 124.74 120.30 4.44 0.50 N 49 1 CG1 H VAL 206 ? ? CB H VAL 206 ? ? CG2 H VAL 206 ? ? 100.19 110.90 -10.71 1.60 N 50 1 CA H PRO 227 ? ? C H PRO 227 ? ? N H ARG 228 ? ? 102.86 117.20 -14.34 2.20 Y 51 1 N H ARG 228 ? ? CA H ARG 228 ? ? C H ARG 228 ? ? 92.17 111.00 -18.83 2.70 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN L 28 ? ? -60.56 0.43 2 1 TYR L 32 ? ? -101.81 68.07 3 1 VAL L 51 ? ? 55.44 -52.33 4 1 ARG L 61 ? ? -79.83 21.97 5 1 ALA L 130 ? ? -165.94 111.81 6 1 LYS L 142 ? ? -39.60 -10.18 7 1 ASP L 151 ? ? -179.57 34.83 8 1 SER L 153 ? ? -69.23 -169.89 9 1 ARG L 188 ? ? -95.31 51.55 10 1 ASN L 190 ? ? -96.16 -73.59 11 1 LYS L 199 ? ? -20.02 -54.42 12 1 THR L 200 ? ? -58.32 -6.48 13 1 LEU H 45 ? ? -67.32 99.31 14 1 TRP H 50 ? ? -179.86 148.10 15 1 TYR H 53 ? ? -71.39 -71.68 16 1 ASP H 61 ? ? -42.63 7.49 17 1 THR H 87 ? ? -55.42 106.06 18 1 PRO H 126 ? ? -49.44 -6.30 19 1 SER H 128 ? ? 53.91 7.34 20 1 THR H 134 ? ? -67.64 -72.75 21 1 SER H 136 ? ? 29.77 33.30 22 1 SER H 167 ? ? -100.74 -73.66 23 1 SER H 180 ? ? 49.56 80.86 24 1 ASP H 183 ? ? 62.56 -31.29 25 1 PRO H 199 ? ? -63.87 -71.02 # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name PROGESTERONE-11-ALPHA-OL-HEMISUCCINATE _pdbx_entity_nonpoly.comp_id SIH #