data_1DBU # _entry.id 1DBU # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1DBU RCSB RCSB009953 WWPDB D_1000009953 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1DBX . unspecified TargetDB HI1434 . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1DBU _pdbx_database_status.recvd_initial_deposition_date 1999-11-03 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Zhang, H.' 1 'Huang, K.' 2 'Li, Z.' 3 'Herzberg, O.' 4 'Structure 2 Function Project (S2F)' 5 # _citation.id primary _citation.title 'Crystal structure of YbaK protein from Haemophilus influenzae (HI1434) at 1.8 A resolution: functional implications.' _citation.journal_abbrev Proteins _citation.journal_volume 40 _citation.page_first 86 _citation.page_last 97 _citation.year 2000 _citation.journal_id_ASTM PSFGEY _citation.country US _citation.journal_id_ISSN 0887-3585 _citation.journal_id_CSD 0867 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 10813833 _citation.pdbx_database_id_DOI '10.1002/(SICI)1097-0134(20000701)40:1<86::AID-PROT100>3.0.CO;2-Y' # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Zhang, H.' 1 primary 'Huang, K.' 2 primary 'Li, Z.' 3 primary 'Banerjei, L.' 4 primary 'Fisher, K.E.' 5 primary 'Grishin, N.V.' 6 primary 'Eisenstein, E.' 7 primary 'Herzberg, O.' 8 # _cell.entry_id 1DBU _cell.length_a 102.570 _cell.length_b 42.490 _cell.length_c 32.540 _cell.angle_alpha 90.00 _cell.angle_beta 104.17 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1DBU _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'cysteinyl-tRNA(Pro) deacylase' 17273.607 1 ? ? ? ? 2 non-polymer syn 'MERCURY (II) ION' 200.590 1 ? ? ? ? 3 water nat water 18.015 171 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name HI1434 # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;MTPAIDLLKKQKIPFILHTYDHDPNNQHFGDEAAEKLGIDPNRSFKTLLVAENGDQKKLACFVLATAN(MSE)LNLKKAA KSIGVKKVE(MSE)ADKDAAQKSTGYLVGGISPLGQKKRVKTVINSTALEFETIYVSGGKRGLSVEIAPQDLAKVLGAEF TDIVDE ; _entity_poly.pdbx_seq_one_letter_code_can ;MTPAIDLLKKQKIPFILHTYDHDPNNQHFGDEAAEKLGIDPNRSFKTLLVAENGDQKKLACFVLATANMLNLKKAAKSIG VKKVEMADKDAAQKSTGYLVGGISPLGQKKRVKTVINSTALEFETIYVSGGKRGLSVEIAPQDLAKVLGAEFTDIVDE ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier HI1434 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 THR n 1 3 PRO n 1 4 ALA n 1 5 ILE n 1 6 ASP n 1 7 LEU n 1 8 LEU n 1 9 LYS n 1 10 LYS n 1 11 GLN n 1 12 LYS n 1 13 ILE n 1 14 PRO n 1 15 PHE n 1 16 ILE n 1 17 LEU n 1 18 HIS n 1 19 THR n 1 20 TYR n 1 21 ASP n 1 22 HIS n 1 23 ASP n 1 24 PRO n 1 25 ASN n 1 26 ASN n 1 27 GLN n 1 28 HIS n 1 29 PHE n 1 30 GLY n 1 31 ASP n 1 32 GLU n 1 33 ALA n 1 34 ALA n 1 35 GLU n 1 36 LYS n 1 37 LEU n 1 38 GLY n 1 39 ILE n 1 40 ASP n 1 41 PRO n 1 42 ASN n 1 43 ARG n 1 44 SER n 1 45 PHE n 1 46 LYS n 1 47 THR n 1 48 LEU n 1 49 LEU n 1 50 VAL n 1 51 ALA n 1 52 GLU n 1 53 ASN n 1 54 GLY n 1 55 ASP n 1 56 GLN n 1 57 LYS n 1 58 LYS n 1 59 LEU n 1 60 ALA n 1 61 CYS n 1 62 PHE n 1 63 VAL n 1 64 LEU n 1 65 ALA n 1 66 THR n 1 67 ALA n 1 68 ASN n 1 69 MSE n 1 70 LEU n 1 71 ASN n 1 72 LEU n 1 73 LYS n 1 74 LYS n 1 75 ALA n 1 76 ALA n 1 77 LYS n 1 78 SER n 1 79 ILE n 1 80 GLY n 1 81 VAL n 1 82 LYS n 1 83 LYS n 1 84 VAL n 1 85 GLU n 1 86 MSE n 1 87 ALA n 1 88 ASP n 1 89 LYS n 1 90 ASP n 1 91 ALA n 1 92 ALA n 1 93 GLN n 1 94 LYS n 1 95 SER n 1 96 THR n 1 97 GLY n 1 98 TYR n 1 99 LEU n 1 100 VAL n 1 101 GLY n 1 102 GLY n 1 103 ILE n 1 104 SER n 1 105 PRO n 1 106 LEU n 1 107 GLY n 1 108 GLN n 1 109 LYS n 1 110 LYS n 1 111 ARG n 1 112 VAL n 1 113 LYS n 1 114 THR n 1 115 VAL n 1 116 ILE n 1 117 ASN n 1 118 SER n 1 119 THR n 1 120 ALA n 1 121 LEU n 1 122 GLU n 1 123 PHE n 1 124 GLU n 1 125 THR n 1 126 ILE n 1 127 TYR n 1 128 VAL n 1 129 SER n 1 130 GLY n 1 131 GLY n 1 132 LYS n 1 133 ARG n 1 134 GLY n 1 135 LEU n 1 136 SER n 1 137 VAL n 1 138 GLU n 1 139 ILE n 1 140 ALA n 1 141 PRO n 1 142 GLN n 1 143 ASP n 1 144 LEU n 1 145 ALA n 1 146 LYS n 1 147 VAL n 1 148 LEU n 1 149 GLY n 1 150 ALA n 1 151 GLU n 1 152 PHE n 1 153 THR n 1 154 ASP n 1 155 ILE n 1 156 VAL n 1 157 ASP n 1 158 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Haemophilus _entity_src_gen.pdbx_gene_src_gene YbaK _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Haemophilus influenzae' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 727 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain B834 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector YCYB2 _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'IMPACT I SYSTEM FROM NEW ENGLAND BIOLABS' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Y1434_HAEIN _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession P45202 _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1DBU _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 158 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P45202 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 158 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 158 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1DBU MSE A 69 ? UNP P45202 MET 69 'MODIFIED RESIDUE' 69 1 1 1DBU MSE A 86 ? UNP P45202 MET 86 'MODIFIED RESIDUE' 86 2 1 1DBU ASN A 117 ? UNP P45202 LYS 117 'SEE REMARK 999' 117 3 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HG non-polymer . 'MERCURY (II) ION' ? 'Hg 2' 200.590 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1DBU _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.99 _exptl_crystal.density_percent_sol 28.0 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type BRANDEIS _diffrn_detector.pdbx_collection_date 1998-10-27 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0091 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X12C' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X12C _diffrn_source.pdbx_wavelength 1.0091 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1DBU _reflns.observed_criterion_sigma_I -3.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 20.0 _reflns.d_resolution_high 1.8 _reflns.number_obs 25089 _reflns.number_all ? _reflns.percent_possible_obs 98.7 _reflns.pdbx_Rmerge_I_obs 0.059 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate 20.9 _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.80 _reflns_shell.d_res_low 1.86 _reflns_shell.percent_possible_all 98.0 _reflns_shell.Rmerge_I_obs 0.357 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1DBU _refine.ls_number_reflns_obs 12727 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I 0.0 _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 20.0 _refine.ls_d_res_high 1.8 _refine.ls_percent_reflns_obs 99.6 _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.193 _refine.ls_R_factor_R_free 0.262 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.0 _refine.ls_number_reflns_R_free 1260 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method free-R _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.173 _refine.pdbx_overall_ESU_R_Free 0.171 _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1187 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.number_atoms_solvent 171 _refine_hist.number_atoms_total 1359 _refine_hist.d_res_high 1.8 _refine_hist.d_res_low 20.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function p_bond_d 0.013 0.020 ? ? 'X-RAY DIFFRACTION' ? p_angle_d 0.032 0.040 ? ? 'X-RAY DIFFRACTION' ? # _struct.entry_id 1DBU _struct.title 'Crystal structure of cysteinyl-tRNA(Pro) deacylase protein from H. influenzae (HI1434)' _struct.pdbx_descriptor 'cysteinyl-tRNA(Pro) deacylase' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1DBU _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'STRUCTURAL GENOMICS, YBAK, Structure 2 Function Project, S2F, HYDROLASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 2 ? LYS A 12 ? THR A 2 LYS A 12 1 ? 11 HELX_P HELX_P2 2 ASP A 31 ? GLY A 38 ? ASP A 31 GLY A 38 1 ? 8 HELX_P HELX_P3 3 ASP A 40 ? ASN A 42 ? ASP A 40 ASN A 42 5 ? 3 HELX_P HELX_P4 4 ASN A 71 ? ILE A 79 ? ASN A 71 ILE A 79 1 ? 9 HELX_P HELX_P5 5 ASP A 88 ? GLY A 97 ? ASP A 88 GLY A 97 1 ? 10 HELX_P HELX_P6 6 THR A 119 ? PHE A 123 ? THR A 119 PHE A 123 5 ? 5 HELX_P HELX_P7 7 ALA A 140 ? GLY A 149 ? ALA A 140 GLY A 149 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A ASN 68 C ? ? ? 1_555 A MSE 69 N ? ? A ASN 68 A MSE 69 1_555 ? ? ? ? ? ? ? 1.329 ? covale2 covale ? ? A MSE 69 C ? ? ? 1_555 A LEU 70 N ? ? A MSE 69 A LEU 70 1_555 ? ? ? ? ? ? ? 1.345 ? covale3 covale ? ? A GLU 85 C ? ? ? 1_555 A MSE 86 N ? ? A GLU 85 A MSE 86 1_555 ? ? ? ? ? ? ? 1.332 ? covale4 covale ? ? A MSE 86 C ? ? ? 1_555 A ALA 87 N ? ? A MSE 86 A ALA 87 1_555 ? ? ? ? ? ? ? 1.328 ? metalc1 metalc ? ? B HG . HG ? ? ? 1_555 A GLN 108 NE2 ? ? A HG 260 A GLN 108 1_555 ? ? ? ? ? ? ? 3.352 ? metalc2 metalc ? ? B HG . HG ? ? ? 1_555 A CYS 61 SG B ? A HG 260 A CYS 61 1_555 ? ? ? ? ? ? ? 3.005 ? metalc3 metalc ? ? B HG . HG ? ? ? 1_555 A GLN 108 OE1 ? ? A HG 260 A GLN 108 1_555 ? ? ? ? ? ? ? 3.488 ? metalc4 metalc ? ? B HG . HG ? ? ? 1_555 A THR 114 OG1 ? ? A HG 260 A THR 114 1_555 ? ? ? ? ? ? ? 2.774 ? metalc5 metalc ? ? B HG . HG ? ? ? 1_555 C HOH . O ? ? A HG 260 A HOH 415 1_555 ? ? ? ? ? ? ? 1.808 ? metalc6 metalc ? ? B HG . HG ? ? ? 1_555 C HOH . O ? ? A HG 260 A HOH 418 1_555 ? ? ? ? ? ? ? 2.741 ? metalc7 metalc ? ? B HG . HG ? ? ? 1_555 A CYS 61 SG A ? A HG 260 A CYS 61 1_555 ? ? ? ? ? ? ? 2.635 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? A1 ? 7 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A1 1 2 ? parallel A1 2 3 ? parallel A1 3 4 ? anti-parallel A1 4 5 ? parallel A1 5 6 ? anti-parallel A1 6 7 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLU A 151 ? THR A 153 ? GLU A 151 THR A 153 A 2 THR A 114 ? ASN A 117 ? THR A 114 ASN A 117 A 3 LEU A 59 ? ALA A 65 ? LEU A 59 ALA A 65 A 4 SER A 44 ? GLU A 52 ? SER A 44 GLU A 52 A 5 VAL A 84 ? MSE A 86 ? VAL A 84 MSE A 86 A1 1 GLU A 151 ? THR A 153 ? GLU A 151 THR A 153 A1 2 THR A 114 ? ASN A 117 ? THR A 114 ASN A 117 A1 3 LEU A 59 ? ALA A 65 ? LEU A 59 ALA A 65 A1 4 SER A 44 ? GLU A 52 ? SER A 44 GLU A 52 A1 5 ILE A 126 ? SER A 129 ? ILE A 126 SER A 129 A1 6 LEU A 135 ? ILE A 139 ? LEU A 135 ILE A 139 A1 7 ILE A 16 ? THR A 19 ? ILE A 16 THR A 19 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLU A 151 ? N GLU A 151 O THR A 114 ? O THR A 114 A 2 3 N VAL A 115 ? N VAL A 115 O CYS A 61 ? O CYS A 61 A 3 4 O LEU A 64 ? O LEU A 64 N LYS A 46 ? N LYS A 46 A 4 5 N ALA A 51 ? N ALA A 51 O GLU A 85 ? O GLU A 85 A1 1 2 N GLU A 151 ? N GLU A 151 O THR A 114 ? O THR A 114 A1 2 3 N VAL A 115 ? N VAL A 115 O CYS A 61 ? O CYS A 61 A1 3 4 O LEU A 64 ? O LEU A 64 N LYS A 46 ? N LYS A 46 A1 4 5 N PHE A 45 ? N PHE A 45 O TYR A 127 ? O TYR A 127 A1 5 6 O VAL A 128 ? O VAL A 128 N VAL A 137 ? N VAL A 137 A1 6 7 N GLU A 138 ? N GLU A 138 O ILE A 16 ? O ILE A 16 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id ? _struct_site.pdbx_auth_comp_id ? _struct_site.pdbx_auth_seq_id ? _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 6 _struct_site.details 'BINDING SITE FOR RESIDUE HG A 260' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 CYS A 61 ? CYS A 61 . ? 1_555 ? 2 AC1 6 PRO A 105 ? PRO A 105 . ? 1_555 ? 3 AC1 6 GLN A 108 ? GLN A 108 . ? 1_555 ? 4 AC1 6 THR A 114 ? THR A 114 . ? 1_555 ? 5 AC1 6 HOH C . ? HOH A 415 . ? 1_555 ? 6 AC1 6 HOH C . ? HOH A 418 . ? 1_555 ? # _database_PDB_matrix.entry_id 1DBU _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1DBU _atom_sites.fract_transf_matrix[1][1] 0.00975 _atom_sites.fract_transf_matrix[1][2] 0.00000 _atom_sites.fract_transf_matrix[1][3] 0.00246 _atom_sites.fract_transf_matrix[2][1] 0.00000 _atom_sites.fract_transf_matrix[2][2] 0.02353 _atom_sites.fract_transf_matrix[2][3] 0.00000 _atom_sites.fract_transf_matrix[3][1] 0.00000 _atom_sites.fract_transf_matrix[3][2] 0.00000 _atom_sites.fract_transf_matrix[3][3] 0.03170 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C HG N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 THR 2 2 2 THR THR A . n A 1 3 PRO 3 3 3 PRO PRO A . n A 1 4 ALA 4 4 4 ALA ALA A . n A 1 5 ILE 5 5 5 ILE ILE A . n A 1 6 ASP 6 6 6 ASP ASP A . n A 1 7 LEU 7 7 7 LEU LEU A . n A 1 8 LEU 8 8 8 LEU LEU A . n A 1 9 LYS 9 9 9 LYS LYS A . n A 1 10 LYS 10 10 10 LYS LYS A . n A 1 11 GLN 11 11 11 GLN GLN A . n A 1 12 LYS 12 12 12 LYS LYS A . n A 1 13 ILE 13 13 13 ILE ILE A . n A 1 14 PRO 14 14 14 PRO PRO A . n A 1 15 PHE 15 15 15 PHE PHE A . n A 1 16 ILE 16 16 16 ILE ILE A . n A 1 17 LEU 17 17 17 LEU LEU A . n A 1 18 HIS 18 18 18 HIS HIS A . n A 1 19 THR 19 19 19 THR THR A . n A 1 20 TYR 20 20 20 TYR TYR A . n A 1 21 ASP 21 21 21 ASP ASP A . n A 1 22 HIS 22 22 22 HIS HIS A . n A 1 23 ASP 23 23 23 ASP ASP A . n A 1 24 PRO 24 24 24 PRO PRO A . n A 1 25 ASN 25 25 25 ASN ASN A . n A 1 26 ASN 26 26 ? ? ? A . n A 1 27 GLN 27 27 ? ? ? A . n A 1 28 HIS 28 28 ? ? ? A . n A 1 29 PHE 29 29 ? ? ? A . n A 1 30 GLY 30 30 ? ? ? A . n A 1 31 ASP 31 31 31 ASP ASP A . n A 1 32 GLU 32 32 32 GLU GLU A . n A 1 33 ALA 33 33 33 ALA ALA A . n A 1 34 ALA 34 34 34 ALA ALA A . n A 1 35 GLU 35 35 35 GLU GLU A . n A 1 36 LYS 36 36 36 LYS LYS A . n A 1 37 LEU 37 37 37 LEU LEU A . n A 1 38 GLY 38 38 38 GLY GLY A . n A 1 39 ILE 39 39 39 ILE ILE A . n A 1 40 ASP 40 40 40 ASP ASP A . n A 1 41 PRO 41 41 41 PRO PRO A . n A 1 42 ASN 42 42 42 ASN ASN A . n A 1 43 ARG 43 43 43 ARG ARG A . n A 1 44 SER 44 44 44 SER SER A . n A 1 45 PHE 45 45 45 PHE PHE A . n A 1 46 LYS 46 46 46 LYS LYS A . n A 1 47 THR 47 47 47 THR THR A . n A 1 48 LEU 48 48 48 LEU LEU A . n A 1 49 LEU 49 49 49 LEU LEU A . n A 1 50 VAL 50 50 50 VAL VAL A . n A 1 51 ALA 51 51 51 ALA ALA A . n A 1 52 GLU 52 52 52 GLU GLU A . n A 1 53 ASN 53 53 53 ASN ASN A . n A 1 54 GLY 54 54 54 GLY GLY A . n A 1 55 ASP 55 55 55 ASP ASP A . n A 1 56 GLN 56 56 56 GLN GLN A . n A 1 57 LYS 57 57 57 LYS LYS A . n A 1 58 LYS 58 58 58 LYS LYS A . n A 1 59 LEU 59 59 59 LEU LEU A . n A 1 60 ALA 60 60 60 ALA ALA A . n A 1 61 CYS 61 61 61 CYS CYS A . n A 1 62 PHE 62 62 62 PHE PHE A . n A 1 63 VAL 63 63 63 VAL VAL A . n A 1 64 LEU 64 64 64 LEU LEU A . n A 1 65 ALA 65 65 65 ALA ALA A . n A 1 66 THR 66 66 66 THR THR A . n A 1 67 ALA 67 67 67 ALA ALA A . n A 1 68 ASN 68 68 68 ASN ASN A . n A 1 69 MSE 69 69 69 MSE MET A . n A 1 70 LEU 70 70 70 LEU LEU A . n A 1 71 ASN 71 71 71 ASN ASN A . n A 1 72 LEU 72 72 72 LEU LEU A . n A 1 73 LYS 73 73 73 LYS LYS A . n A 1 74 LYS 74 74 74 LYS LYS A . n A 1 75 ALA 75 75 75 ALA ALA A . n A 1 76 ALA 76 76 76 ALA ALA A . n A 1 77 LYS 77 77 77 LYS LYS A . n A 1 78 SER 78 78 78 SER SER A . n A 1 79 ILE 79 79 79 ILE ILE A . n A 1 80 GLY 80 80 80 GLY GLY A . n A 1 81 VAL 81 81 81 VAL VAL A . n A 1 82 LYS 82 82 82 LYS LYS A . n A 1 83 LYS 83 83 83 LYS LYS A . n A 1 84 VAL 84 84 84 VAL VAL A . n A 1 85 GLU 85 85 85 GLU GLU A . n A 1 86 MSE 86 86 86 MSE MET A . n A 1 87 ALA 87 87 87 ALA ALA A . n A 1 88 ASP 88 88 88 ASP ASP A . n A 1 89 LYS 89 89 89 LYS LYS A . n A 1 90 ASP 90 90 90 ASP ASP A . n A 1 91 ALA 91 91 91 ALA ALA A . n A 1 92 ALA 92 92 92 ALA ALA A . n A 1 93 GLN 93 93 93 GLN GLN A . n A 1 94 LYS 94 94 94 LYS LYS A . n A 1 95 SER 95 95 95 SER SER A . n A 1 96 THR 96 96 96 THR THR A . n A 1 97 GLY 97 97 97 GLY GLY A . n A 1 98 TYR 98 98 98 TYR TYR A . n A 1 99 LEU 99 99 99 LEU LEU A . n A 1 100 VAL 100 100 100 VAL VAL A . n A 1 101 GLY 101 101 101 GLY GLY A . n A 1 102 GLY 102 102 102 GLY GLY A . n A 1 103 ILE 103 103 103 ILE ILE A . n A 1 104 SER 104 104 104 SER SER A . n A 1 105 PRO 105 105 105 PRO PRO A . n A 1 106 LEU 106 106 106 LEU LEU A . n A 1 107 GLY 107 107 107 GLY GLY A . n A 1 108 GLN 108 108 108 GLN GLN A . n A 1 109 LYS 109 109 109 LYS LYS A . n A 1 110 LYS 110 110 110 LYS LYS A . n A 1 111 ARG 111 111 111 ARG ARG A . n A 1 112 VAL 112 112 112 VAL VAL A . n A 1 113 LYS 113 113 113 LYS LYS A . n A 1 114 THR 114 114 114 THR THR A . n A 1 115 VAL 115 115 115 VAL VAL A . n A 1 116 ILE 116 116 116 ILE ILE A . n A 1 117 ASN 117 117 117 ASN ASN A . n A 1 118 SER 118 118 118 SER SER A . n A 1 119 THR 119 119 119 THR THR A . n A 1 120 ALA 120 120 120 ALA ALA A . n A 1 121 LEU 121 121 121 LEU LEU A . n A 1 122 GLU 122 122 122 GLU GLU A . n A 1 123 PHE 123 123 123 PHE PHE A . n A 1 124 GLU 124 124 124 GLU GLU A . n A 1 125 THR 125 125 125 THR THR A . n A 1 126 ILE 126 126 126 ILE ILE A . n A 1 127 TYR 127 127 127 TYR TYR A . n A 1 128 VAL 128 128 128 VAL VAL A . n A 1 129 SER 129 129 129 SER SER A . n A 1 130 GLY 130 130 130 GLY GLY A . n A 1 131 GLY 131 131 131 GLY GLY A . n A 1 132 LYS 132 132 132 LYS LYS A . n A 1 133 ARG 133 133 133 ARG ARG A . n A 1 134 GLY 134 134 134 GLY GLY A . n A 1 135 LEU 135 135 135 LEU LEU A . n A 1 136 SER 136 136 136 SER SER A . n A 1 137 VAL 137 137 137 VAL VAL A . n A 1 138 GLU 138 138 138 GLU GLU A . n A 1 139 ILE 139 139 139 ILE ILE A . n A 1 140 ALA 140 140 140 ALA ALA A . n A 1 141 PRO 141 141 141 PRO PRO A . n A 1 142 GLN 142 142 142 GLN GLN A . n A 1 143 ASP 143 143 143 ASP ASP A . n A 1 144 LEU 144 144 144 LEU LEU A . n A 1 145 ALA 145 145 145 ALA ALA A . n A 1 146 LYS 146 146 146 LYS LYS A . n A 1 147 VAL 147 147 147 VAL VAL A . n A 1 148 LEU 148 148 148 LEU LEU A . n A 1 149 GLY 149 149 149 GLY GLY A . n A 1 150 ALA 150 150 150 ALA ALA A . n A 1 151 GLU 151 151 151 GLU GLU A . n A 1 152 PHE 152 152 152 PHE PHE A . n A 1 153 THR 153 153 153 THR THR A . n A 1 154 ASP 154 154 154 ASP ASP A . n A 1 155 ILE 155 155 155 ILE ILE A . n A 1 156 VAL 156 156 156 VAL VAL A . n A 1 157 ASP 157 157 157 ASP ASP A . n A 1 158 GLU 158 158 158 GLU GLU A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'Structure 2 Function Project' _pdbx_SG_project.initial_of_center S2F # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 69 A MSE 69 ? MET SELENOMETHIONINE 2 A MSE 86 A MSE 86 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 NE2 ? A GLN 108 ? A GLN 108 ? 1_555 HG ? B HG . ? A HG 260 ? 1_555 SG B A CYS 61 ? A CYS 61 ? 1_555 63.6 ? 2 NE2 ? A GLN 108 ? A GLN 108 ? 1_555 HG ? B HG . ? A HG 260 ? 1_555 OE1 ? A GLN 108 ? A GLN 108 ? 1_555 38.7 ? 3 SG B A CYS 61 ? A CYS 61 ? 1_555 HG ? B HG . ? A HG 260 ? 1_555 OE1 ? A GLN 108 ? A GLN 108 ? 1_555 61.1 ? 4 NE2 ? A GLN 108 ? A GLN 108 ? 1_555 HG ? B HG . ? A HG 260 ? 1_555 OG1 ? A THR 114 ? A THR 114 ? 1_555 170.9 ? 5 SG B A CYS 61 ? A CYS 61 ? 1_555 HG ? B HG . ? A HG 260 ? 1_555 OG1 ? A THR 114 ? A THR 114 ? 1_555 107.4 ? 6 OE1 ? A GLN 108 ? A GLN 108 ? 1_555 HG ? B HG . ? A HG 260 ? 1_555 OG1 ? A THR 114 ? A THR 114 ? 1_555 139.2 ? 7 NE2 ? A GLN 108 ? A GLN 108 ? 1_555 HG ? B HG . ? A HG 260 ? 1_555 O ? C HOH . ? A HOH 415 ? 1_555 77.0 ? 8 SG B A CYS 61 ? A CYS 61 ? 1_555 HG ? B HG . ? A HG 260 ? 1_555 O ? C HOH . ? A HOH 415 ? 1_555 56.7 ? 9 OE1 ? A GLN 108 ? A GLN 108 ? 1_555 HG ? B HG . ? A HG 260 ? 1_555 O ? C HOH . ? A HOH 415 ? 1_555 40.7 ? 10 OG1 ? A THR 114 ? A THR 114 ? 1_555 HG ? B HG . ? A HG 260 ? 1_555 O ? C HOH . ? A HOH 415 ? 1_555 99.0 ? 11 NE2 ? A GLN 108 ? A GLN 108 ? 1_555 HG ? B HG . ? A HG 260 ? 1_555 O ? C HOH . ? A HOH 418 ? 1_555 104.8 ? 12 SG B A CYS 61 ? A CYS 61 ? 1_555 HG ? B HG . ? A HG 260 ? 1_555 O ? C HOH . ? A HOH 418 ? 1_555 133.9 ? 13 OE1 ? A GLN 108 ? A GLN 108 ? 1_555 HG ? B HG . ? A HG 260 ? 1_555 O ? C HOH . ? A HOH 418 ? 1_555 82.2 ? 14 OG1 ? A THR 114 ? A THR 114 ? 1_555 HG ? B HG . ? A HG 260 ? 1_555 O ? C HOH . ? A HOH 418 ? 1_555 82.0 ? 15 O ? C HOH . ? A HOH 415 ? 1_555 HG ? B HG . ? A HG 260 ? 1_555 O ? C HOH . ? A HOH 418 ? 1_555 77.4 ? 16 NE2 ? A GLN 108 ? A GLN 108 ? 1_555 HG ? B HG . ? A HG 260 ? 1_555 SG A A CYS 61 ? A CYS 61 ? 1_555 78.0 ? 17 SG B A CYS 61 ? A CYS 61 ? 1_555 HG ? B HG . ? A HG 260 ? 1_555 SG A A CYS 61 ? A CYS 61 ? 1_555 40.3 ? 18 OE1 ? A GLN 108 ? A GLN 108 ? 1_555 HG ? B HG . ? A HG 260 ? 1_555 SG A A CYS 61 ? A CYS 61 ? 1_555 96.0 ? 19 OG1 ? A THR 114 ? A THR 114 ? 1_555 HG ? B HG . ? A HG 260 ? 1_555 SG A A CYS 61 ? A CYS 61 ? 1_555 94.4 ? 20 O ? C HOH . ? A HOH 415 ? 1_555 HG ? B HG . ? A HG 260 ? 1_555 SG A A CYS 61 ? A CYS 61 ? 1_555 95.9 ? 21 O ? C HOH . ? A HOH 418 ? 1_555 HG ? B HG . ? A HG 260 ? 1_555 SG A A CYS 61 ? A CYS 61 ? 1_555 171.8 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2000-06-14 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DENZO 'data reduction' . ? 1 SCALEPACK 'data scaling' . ? 2 MLPHARE phasing . ? 3 REFMAC refinement . ? 4 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A ASP 6 ? ? CG A ASP 6 ? ? OD1 A ASP 6 ? ? 125.03 118.30 6.73 0.90 N 2 1 CB A ASP 6 ? ? CG A ASP 6 ? ? OD2 A ASP 6 ? ? 112.74 118.30 -5.56 0.90 N 3 1 CB A ASP 21 ? ? CG A ASP 21 ? ? OD2 A ASP 21 ? ? 124.49 118.30 6.19 0.90 N 4 1 CA A ASN 42 ? ? CB A ASN 42 ? ? CG A ASN 42 ? ? 127.99 113.40 14.59 2.20 N 5 1 N A VAL 84 ? ? CA A VAL 84 ? ? CB A VAL 84 ? ? 96.76 111.50 -14.74 2.20 N 6 1 CA A LEU 106 ? ? CB A LEU 106 ? ? CG A LEU 106 ? ? 133.49 115.30 18.19 2.30 N 7 1 NE A ARG 111 ? ? CZ A ARG 111 ? ? NH1 A ARG 111 ? ? 123.81 120.30 3.51 0.50 N 8 1 NE A ARG 133 ? B CZ A ARG 133 ? B NH1 A ARG 133 ? B 116.44 120.30 -3.86 0.50 N 9 1 NE A ARG 133 ? B CZ A ARG 133 ? B NH2 A ARG 133 ? B 123.73 120.30 3.43 0.50 N 10 1 CB A ASP 154 ? ? CG A ASP 154 ? ? OD1 A ASP 154 ? ? 125.58 118.30 7.28 0.90 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 24 ? ? -26.96 -33.71 2 1 ASN A 53 ? ? 48.22 29.18 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A ASN 26 ? A ASN 26 3 1 Y 1 A GLN 27 ? A GLN 27 4 1 Y 1 A HIS 28 ? A HIS 28 5 1 Y 1 A PHE 29 ? A PHE 29 6 1 Y 1 A GLY 30 ? A GLY 30 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MERCURY (II) ION' HG 3 water HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HG 1 260 160 HG IUM A . C 3 HOH 1 261 1 HOH WAT A . C 3 HOH 2 262 2 HOH WAT A . C 3 HOH 3 263 3 HOH WAT A . C 3 HOH 4 264 4 HOH WAT A . C 3 HOH 5 265 5 HOH WAT A . C 3 HOH 6 266 6 HOH WAT A . C 3 HOH 7 267 7 HOH WAT A . C 3 HOH 8 268 8 HOH WAT A . C 3 HOH 9 269 9 HOH WAT A . C 3 HOH 10 270 10 HOH WAT A . C 3 HOH 11 271 11 HOH WAT A . C 3 HOH 12 272 12 HOH WAT A . C 3 HOH 13 273 13 HOH WAT A . C 3 HOH 14 274 14 HOH WAT A . C 3 HOH 15 275 15 HOH WAT A . C 3 HOH 16 276 16 HOH WAT A . C 3 HOH 17 277 17 HOH WAT A . C 3 HOH 18 278 18 HOH WAT A . C 3 HOH 19 279 19 HOH WAT A . C 3 HOH 20 280 20 HOH WAT A . C 3 HOH 21 281 21 HOH WAT A . C 3 HOH 22 282 22 HOH WAT A . C 3 HOH 23 283 23 HOH WAT A . C 3 HOH 24 284 24 HOH WAT A . C 3 HOH 25 285 25 HOH WAT A . C 3 HOH 26 286 26 HOH WAT A . C 3 HOH 27 287 27 HOH WAT A . C 3 HOH 28 288 28 HOH WAT A . C 3 HOH 29 289 29 HOH WAT A . C 3 HOH 30 290 30 HOH WAT A . C 3 HOH 31 291 31 HOH WAT A . C 3 HOH 32 292 32 HOH WAT A . C 3 HOH 33 293 33 HOH WAT A . C 3 HOH 34 294 34 HOH WAT A . C 3 HOH 35 295 35 HOH WAT A . C 3 HOH 36 296 36 HOH WAT A . C 3 HOH 37 297 37 HOH WAT A . C 3 HOH 38 298 38 HOH WAT A . C 3 HOH 39 299 39 HOH WAT A . C 3 HOH 40 300 40 HOH WAT A . C 3 HOH 41 301 41 HOH WAT A . C 3 HOH 42 302 42 HOH WAT A . C 3 HOH 43 303 43 HOH WAT A . C 3 HOH 44 304 44 HOH WAT A . C 3 HOH 45 305 45 HOH WAT A . C 3 HOH 46 306 46 HOH WAT A . C 3 HOH 47 307 47 HOH WAT A . C 3 HOH 48 308 48 HOH WAT A . C 3 HOH 49 309 49 HOH WAT A . C 3 HOH 50 310 50 HOH WAT A . C 3 HOH 51 311 51 HOH WAT A . C 3 HOH 52 312 52 HOH WAT A . C 3 HOH 53 313 53 HOH WAT A . C 3 HOH 54 314 54 HOH WAT A . C 3 HOH 55 315 55 HOH WAT A . C 3 HOH 56 316 56 HOH WAT A . C 3 HOH 57 317 57 HOH WAT A . C 3 HOH 58 318 58 HOH WAT A . C 3 HOH 59 319 59 HOH WAT A . C 3 HOH 60 320 60 HOH WAT A . C 3 HOH 61 321 61 HOH WAT A . C 3 HOH 62 322 62 HOH WAT A . C 3 HOH 63 323 63 HOH WAT A . C 3 HOH 64 324 64 HOH WAT A . C 3 HOH 65 325 65 HOH WAT A . C 3 HOH 66 326 66 HOH WAT A . C 3 HOH 67 327 67 HOH WAT A . C 3 HOH 68 328 68 HOH WAT A . C 3 HOH 69 329 69 HOH WAT A . C 3 HOH 70 330 70 HOH WAT A . C 3 HOH 71 331 71 HOH WAT A . C 3 HOH 72 332 72 HOH WAT A . C 3 HOH 73 333 73 HOH WAT A . C 3 HOH 74 334 74 HOH WAT A . C 3 HOH 75 335 75 HOH WAT A . C 3 HOH 76 336 76 HOH WAT A . C 3 HOH 77 337 77 HOH WAT A . C 3 HOH 78 338 78 HOH WAT A . C 3 HOH 79 339 79 HOH WAT A . C 3 HOH 80 340 80 HOH WAT A . C 3 HOH 81 341 81 HOH WAT A . C 3 HOH 82 342 82 HOH WAT A . C 3 HOH 83 343 83 HOH WAT A . C 3 HOH 84 344 84 HOH WAT A . C 3 HOH 85 345 85 HOH WAT A . C 3 HOH 86 346 86 HOH WAT A . C 3 HOH 87 347 87 HOH WAT A . C 3 HOH 88 348 88 HOH WAT A . C 3 HOH 89 349 89 HOH WAT A . C 3 HOH 90 350 90 HOH WAT A . C 3 HOH 91 351 91 HOH WAT A . C 3 HOH 92 352 92 HOH WAT A . C 3 HOH 93 353 93 HOH WAT A . C 3 HOH 94 354 94 HOH WAT A . C 3 HOH 95 355 95 HOH WAT A . C 3 HOH 96 356 96 HOH WAT A . C 3 HOH 97 357 97 HOH WAT A . C 3 HOH 98 358 98 HOH WAT A . C 3 HOH 99 359 99 HOH WAT A . C 3 HOH 100 360 100 HOH WAT A . C 3 HOH 101 361 101 HOH WAT A . C 3 HOH 102 362 102 HOH WAT A . C 3 HOH 103 363 103 HOH WAT A . C 3 HOH 104 364 104 HOH WAT A . C 3 HOH 105 365 105 HOH WAT A . C 3 HOH 106 366 106 HOH WAT A . C 3 HOH 107 367 107 HOH WAT A . C 3 HOH 108 368 108 HOH WAT A . C 3 HOH 109 369 109 HOH WAT A . C 3 HOH 110 370 110 HOH WAT A . C 3 HOH 111 371 111 HOH WAT A . C 3 HOH 112 372 112 HOH WAT A . C 3 HOH 113 373 113 HOH WAT A . C 3 HOH 114 374 114 HOH WAT A . C 3 HOH 115 375 115 HOH WAT A . C 3 HOH 116 376 116 HOH WAT A . C 3 HOH 117 377 117 HOH WAT A . C 3 HOH 118 378 118 HOH WAT A . C 3 HOH 119 379 119 HOH WAT A . C 3 HOH 120 380 120 HOH WAT A . C 3 HOH 121 381 121 HOH WAT A . C 3 HOH 122 382 122 HOH WAT A . C 3 HOH 123 383 123 HOH WAT A . C 3 HOH 124 384 124 HOH WAT A . C 3 HOH 125 385 125 HOH WAT A . C 3 HOH 126 386 126 HOH WAT A . C 3 HOH 127 387 127 HOH WAT A . C 3 HOH 128 388 128 HOH WAT A . C 3 HOH 129 389 129 HOH WAT A . C 3 HOH 130 390 130 HOH WAT A . C 3 HOH 131 391 131 HOH WAT A . C 3 HOH 132 392 132 HOH WAT A . C 3 HOH 133 393 133 HOH WAT A . C 3 HOH 134 394 134 HOH WAT A . C 3 HOH 135 395 135 HOH WAT A . C 3 HOH 136 396 136 HOH WAT A . C 3 HOH 137 397 137 HOH WAT A . C 3 HOH 138 398 138 HOH WAT A . C 3 HOH 139 399 139 HOH WAT A . C 3 HOH 140 400 140 HOH WAT A . C 3 HOH 141 401 141 HOH WAT A . C 3 HOH 142 402 142 HOH WAT A . C 3 HOH 143 403 143 HOH WAT A . C 3 HOH 144 404 144 HOH WAT A . C 3 HOH 145 405 145 HOH WAT A . C 3 HOH 146 406 146 HOH WAT A . C 3 HOH 147 407 147 HOH WAT A . C 3 HOH 148 408 148 HOH WAT A . C 3 HOH 149 409 149 HOH WAT A . C 3 HOH 150 410 150 HOH WAT A . C 3 HOH 151 411 151 HOH WAT A . C 3 HOH 152 412 152 HOH WAT A . C 3 HOH 153 413 153 HOH WAT A . C 3 HOH 154 414 154 HOH WAT A . C 3 HOH 155 415 155 HOH WAT A . C 3 HOH 156 416 156 HOH WAT A . C 3 HOH 157 417 157 HOH WAT A . C 3 HOH 158 418 158 HOH WAT A . C 3 HOH 159 419 159 HOH WAT A . C 3 HOH 160 420 160 HOH WAT A . C 3 HOH 161 421 161 HOH WAT A . C 3 HOH 162 422 162 HOH WAT A . C 3 HOH 163 423 163 HOH WAT A . C 3 HOH 164 424 164 HOH WAT A . C 3 HOH 165 425 165 HOH WAT A . C 3 HOH 166 426 167 HOH WAT A . C 3 HOH 167 427 168 HOH WAT A . C 3 HOH 168 428 169 HOH WAT A . C 3 HOH 169 429 170 HOH WAT A . C 3 HOH 170 430 171 HOH WAT A . C 3 HOH 171 431 172 HOH WAT A . #