HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 05-NOV-99 1DCJ TITLE SOLUTION STRUCTURE OF YHHP, A NOVEL ESCHERICHIA COLI PROTEIN TITLE 2 IMPLICATED IN THE CELL DIVISION COMPND MOL_ID: 1; COMPND 2 MOLECULE: YHHP PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_PLASMID: PET21 KEYWDS ALPHA-BETA SANDWICH, STRUCTURAL GENOMICS, UNKNOWN FUNCTION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR E.KATOH,T.HATTA,H.SHINDO,T.MIZUNO,T.YAMAZAKI REVDAT 4 16-FEB-22 1DCJ 1 REMARK REVDAT 3 24-FEB-09 1DCJ 1 VERSN REVDAT 2 11-SEP-01 1DCJ 1 HEADER KEYWDS REVDAT 1 18-JUL-01 1DCJ 0 JRNL AUTH E.KATOH,T.HATTA,H.SHINDO,Y.ISHII,H.YAMADA,T.MIZUNO, JRNL AUTH 2 T.YAMAZAKI JRNL TITL HIGH PRECISION NMR STRUCTURE OF YHHP, A NOVEL ESCHERICHIA JRNL TITL 2 COLI PROTEIN IMPLICATED IN CELL DIVISION. JRNL REF J.MOL.BIOL. V. 304 219 2000 JRNL REFN ISSN 0022-2836 JRNL PMID 11080457 JRNL DOI 10.1006/JMBI.2000.4170 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH T.YAMASHINO,M.ISOMURA,C.UEGUCHI,T.MIZUNO REMARK 1 TITL THE YHHP GENE ENCODING A SMALL UBIQUITOUS PROTEIN IS REMARK 1 TITL 2 FUNDAMENTAL FOR NORMAL CELL GROWTH OF ESCHERICHIA COLI REMARK 1 REF J.BACTERIOL. V. 180 2257 1998 REMARK 1 REFN ISSN 0021-9193 REMARK 1 REFERENCE 2 REMARK 1 AUTH Y.ISHII,H.YAMADA,T.YAMAZAKI,E.KATOH,T.MIZUNO REMARK 1 TITL CHARACTERIZATION OF THE YHHP GENE WHOSE DEFICIENCY RESULTS REMARK 1 TITL 2 IN A NON-DIVIDED FILAMENTOUS CELL MORPHOLOGY IN ESCHERICHIA REMARK 1 TITL 3 COLI REMARK 1 REF TO BE PUBLISHED REMARK 1 REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : XWINNMR, X-PLOR 3.1 REMARK 3 AUTHORS : BRUKER (XWINNMR), BRUNGER (X-PLOR) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 THE STRUCTURES ARE BASED ON A TOTAL OF 1655 RESTRAINTS, 1390 ARE REMARK 3 NOE-DERIVED REMARK 3 DISTANCE CONSTRAINTS, 211 DIHEDRAL ANGLE RESTRAINTS, 54 DISTANCE REMARK 3 RESTRAINTS REMARK 3 FROM HYDROGEN BONDS. REMARK 4 REMARK 4 1DCJ COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-NOV-99. REMARK 100 THE DEPOSITION ID IS D_1000009970. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298; 298; 298 REMARK 210 PH : 7.1; 7.1; 7.1 REMARK 210 IONIC STRENGTH : 100MM NACL; 100MM NACL; 100MM REMARK 210 NACL REMARK 210 PRESSURE : AMBIENT; AMBIENT; AMBIENT REMARK 210 SAMPLE CONTENTS : 1MM YHHP U-15N; 10MM PHOSPHATE REMARK 210 BUFFER K; 100MM NACL; 2MM NAN3; REMARK 210 2MM DTT; 90% H20, 10% D2O; 1MM REMARK 210 YHHP U-15N, 13C; 10MM PHOSPHATE REMARK 210 BUFFER K; 100MM NACL; 2MM NAN3; REMARK 210 2MM DTT; 90% H20, 10% D2O; 1MM REMARK 210 YHHP U-15N, 13C; 10MM PHOSPHATE REMARK 210 BUFFER K; 100MM NACL; 2MM NAN3; REMARK 210 2MM DTT; 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; HNHA; REMARK 210 HNHB; 4D_13C-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 750 MHZ REMARK 210 SPECTROMETER MODEL : DMX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE, CAPP/PIPP/STAPP, X-PLOR REMARK 210 3.1 REMARK 210 METHOD USED : HYBRID DISTANCE GEOMETRY REMARK 210 -SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE NMR REMARK 210 SPECTROSCOPY. REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 6 174.89 -45.83 REMARK 500 1 SER A 7 104.19 -46.92 REMARK 500 1 ALA A 14 17.51 -141.77 REMARK 500 1 GLU A 60 25.84 83.16 REMARK 500 1 LEU A 71 146.94 -35.15 REMARK 500 2 SER A 6 174.80 -46.21 REMARK 500 2 SER A 7 104.54 -47.25 REMARK 500 2 ALA A 14 17.72 -140.58 REMARK 500 2 GLU A 60 25.21 81.37 REMARK 500 2 LEU A 71 146.43 -34.80 REMARK 500 3 SER A 6 174.71 -46.51 REMARK 500 3 SER A 7 104.34 -47.28 REMARK 500 3 ALA A 14 19.76 -144.94 REMARK 500 3 GLU A 60 23.79 84.23 REMARK 500 3 LEU A 71 146.58 -35.43 REMARK 500 4 SER A 6 175.09 -47.76 REMARK 500 4 SER A 7 104.10 -47.08 REMARK 500 4 GLU A 60 26.55 83.84 REMARK 500 4 LEU A 71 146.08 -35.82 REMARK 500 5 SER A 6 174.94 -45.80 REMARK 500 5 SER A 7 104.26 -47.06 REMARK 500 5 ALA A 14 20.23 -143.70 REMARK 500 5 GLU A 60 26.18 82.24 REMARK 500 5 LEU A 71 146.46 -35.45 REMARK 500 6 SER A 6 175.05 -44.03 REMARK 500 6 SER A 7 104.30 -46.37 REMARK 500 6 GLU A 60 23.54 84.84 REMARK 500 6 LEU A 71 145.92 -35.26 REMARK 500 7 SER A 6 174.76 -44.90 REMARK 500 7 SER A 7 104.08 -46.71 REMARK 500 7 ALA A 14 18.72 -140.35 REMARK 500 7 LEU A 71 148.08 -36.59 REMARK 500 8 SER A 6 175.12 -46.55 REMARK 500 8 SER A 7 103.79 -46.91 REMARK 500 8 ALA A 14 19.67 -144.79 REMARK 500 8 GLU A 60 29.33 82.95 REMARK 500 8 LEU A 71 146.44 -34.23 REMARK 500 8 LYS A 79 106.34 -59.67 REMARK 500 9 SER A 6 174.69 -45.73 REMARK 500 9 SER A 7 103.84 -46.93 REMARK 500 9 ALA A 14 18.41 -143.97 REMARK 500 9 GLU A 60 28.09 81.29 REMARK 500 9 LEU A 71 147.02 -34.57 REMARK 500 10 SER A 6 174.98 -46.08 REMARK 500 10 SER A 7 104.30 -46.53 REMARK 500 10 ALA A 14 18.91 -142.44 REMARK 500 10 GLU A 60 22.79 83.19 REMARK 500 10 LEU A 71 147.08 -36.76 REMARK 500 11 SER A 6 174.97 -44.87 REMARK 500 11 SER A 7 104.24 -46.69 REMARK 500 REMARK 500 THIS ENTRY HAS 94 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 1 ARG A 18 0.21 SIDE CHAIN REMARK 500 1 ARG A 27 0.29 SIDE CHAIN REMARK 500 1 ARG A 50 0.31 SIDE CHAIN REMARK 500 1 ARG A 74 0.25 SIDE CHAIN REMARK 500 2 ARG A 18 0.29 SIDE CHAIN REMARK 500 2 ARG A 27 0.31 SIDE CHAIN REMARK 500 2 ARG A 31 0.13 SIDE CHAIN REMARK 500 2 ARG A 74 0.20 SIDE CHAIN REMARK 500 2 ARG A 78 0.31 SIDE CHAIN REMARK 500 3 ARG A 18 0.29 SIDE CHAIN REMARK 500 3 ARG A 27 0.32 SIDE CHAIN REMARK 500 3 ARG A 31 0.18 SIDE CHAIN REMARK 500 3 ARG A 50 0.32 SIDE CHAIN REMARK 500 3 ARG A 74 0.19 SIDE CHAIN REMARK 500 3 ARG A 78 0.22 SIDE CHAIN REMARK 500 4 ARG A 18 0.32 SIDE CHAIN REMARK 500 4 ARG A 27 0.26 SIDE CHAIN REMARK 500 4 ARG A 31 0.23 SIDE CHAIN REMARK 500 4 ARG A 50 0.32 SIDE CHAIN REMARK 500 4 ARG A 74 0.28 SIDE CHAIN REMARK 500 4 ARG A 78 0.29 SIDE CHAIN REMARK 500 5 ARG A 18 0.28 SIDE CHAIN REMARK 500 5 ARG A 27 0.08 SIDE CHAIN REMARK 500 5 ARG A 31 0.26 SIDE CHAIN REMARK 500 5 ARG A 50 0.32 SIDE CHAIN REMARK 500 5 ARG A 74 0.13 SIDE CHAIN REMARK 500 5 ARG A 78 0.27 SIDE CHAIN REMARK 500 6 ARG A 18 0.28 SIDE CHAIN REMARK 500 6 ARG A 27 0.20 SIDE CHAIN REMARK 500 6 ARG A 31 0.32 SIDE CHAIN REMARK 500 6 ARG A 74 0.32 SIDE CHAIN REMARK 500 6 ARG A 78 0.09 SIDE CHAIN REMARK 500 7 ARG A 18 0.20 SIDE CHAIN REMARK 500 7 ARG A 27 0.26 SIDE CHAIN REMARK 500 7 ARG A 31 0.10 SIDE CHAIN REMARK 500 7 ARG A 50 0.13 SIDE CHAIN REMARK 500 7 ARG A 74 0.08 SIDE CHAIN REMARK 500 7 ARG A 78 0.09 SIDE CHAIN REMARK 500 8 ARG A 18 0.30 SIDE CHAIN REMARK 500 8 ARG A 27 0.20 SIDE CHAIN REMARK 500 8 ARG A 31 0.29 SIDE CHAIN REMARK 500 8 ARG A 50 0.20 SIDE CHAIN REMARK 500 8 ARG A 74 0.17 SIDE CHAIN REMARK 500 8 ARG A 78 0.13 SIDE CHAIN REMARK 500 9 ARG A 18 0.30 SIDE CHAIN REMARK 500 9 ARG A 27 0.28 SIDE CHAIN REMARK 500 9 ARG A 31 0.30 SIDE CHAIN REMARK 500 9 ARG A 50 0.31 SIDE CHAIN REMARK 500 9 ARG A 74 0.16 SIDE CHAIN REMARK 500 9 ARG A 78 0.32 SIDE CHAIN REMARK 500 REMARK 500 THIS ENTRY HAS 116 PLANE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL DBREF 1DCJ A 1 81 UNP P0A890 SIRA_ECOLI 1 81 SEQRES 1 A 81 MET THR ASP LEU PHE SER SER PRO ASP HIS THR LEU ASP SEQRES 2 A 81 ALA LEU GLY LEU ARG CYS PRO GLU PRO VAL MET MET VAL SEQRES 3 A 81 ARG LYS THR VAL ARG ASN MET GLN PRO GLY GLU THR LEU SEQRES 4 A 81 LEU ILE ILE ALA ASP ASP PRO ALA THR THR ARG ASP ILE SEQRES 5 A 81 PRO GLY PHE CYS THR PHE MET GLU HIS GLU LEU VAL ALA SEQRES 6 A 81 LYS GLU THR ASP GLY LEU PRO TYR ARG TYR LEU ILE ARG SEQRES 7 A 81 LYS GLY GLY HELIX 1 1 PRO A 20 MET A 33 1 14 HELIX 2 2 ALA A 47 MET A 59 1 13 SHEET 1 A 4 HIS A 10 LEU A 12 0 SHEET 2 A 4 LEU A 39 ALA A 43 1 N LEU A 40 O HIS A 10 SHEET 3 A 4 TYR A 73 ARG A 78 -1 N TYR A 73 O ALA A 43 SHEET 4 A 4 GLU A 62 GLU A 67 -1 N GLU A 62 O ARG A 78 CISPEP 1 CYS A 19 PRO A 20 1 -0.50 CISPEP 2 LEU A 71 PRO A 72 1 -0.83 CISPEP 3 CYS A 19 PRO A 20 2 -0.43 CISPEP 4 LEU A 71 PRO A 72 2 -0.92 CISPEP 5 CYS A 19 PRO A 20 3 -0.52 CISPEP 6 LEU A 71 PRO A 72 3 -0.83 CISPEP 7 CYS A 19 PRO A 20 4 -0.46 CISPEP 8 LEU A 71 PRO A 72 4 -0.98 CISPEP 9 CYS A 19 PRO A 20 5 -0.44 CISPEP 10 LEU A 71 PRO A 72 5 -0.94 CISPEP 11 CYS A 19 PRO A 20 6 -0.38 CISPEP 12 LEU A 71 PRO A 72 6 -0.92 CISPEP 13 CYS A 19 PRO A 20 7 -0.39 CISPEP 14 LEU A 71 PRO A 72 7 -0.92 CISPEP 15 CYS A 19 PRO A 20 8 -0.43 CISPEP 16 LEU A 71 PRO A 72 8 -0.96 CISPEP 17 CYS A 19 PRO A 20 9 -0.48 CISPEP 18 LEU A 71 PRO A 72 9 -0.87 CISPEP 19 CYS A 19 PRO A 20 10 -0.63 CISPEP 20 LEU A 71 PRO A 72 10 -0.86 CISPEP 21 CYS A 19 PRO A 20 11 -0.44 CISPEP 22 LEU A 71 PRO A 72 11 -1.05 CISPEP 23 CYS A 19 PRO A 20 12 -0.54 CISPEP 24 LEU A 71 PRO A 72 12 -0.79 CISPEP 25 CYS A 19 PRO A 20 13 -0.28 CISPEP 26 LEU A 71 PRO A 72 13 -1.11 CISPEP 27 CYS A 19 PRO A 20 14 -0.32 CISPEP 28 LEU A 71 PRO A 72 14 -0.89 CISPEP 29 CYS A 19 PRO A 20 15 -0.58 CISPEP 30 LEU A 71 PRO A 72 15 -0.80 CISPEP 31 CYS A 19 PRO A 20 16 -0.54 CISPEP 32 LEU A 71 PRO A 72 16 -0.72 CISPEP 33 CYS A 19 PRO A 20 17 -0.41 CISPEP 34 LEU A 71 PRO A 72 17 -0.93 CISPEP 35 CYS A 19 PRO A 20 18 -0.55 CISPEP 36 LEU A 71 PRO A 72 18 -1.02 CISPEP 37 CYS A 19 PRO A 20 19 -0.57 CISPEP 38 LEU A 71 PRO A 72 19 -0.79 CISPEP 39 CYS A 19 PRO A 20 20 -0.53 CISPEP 40 LEU A 71 PRO A 72 20 -0.90 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1