data_1DDK # _entry.id 1DDK # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.385 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1DDK pdb_00001ddk 10.2210/pdb1ddk/pdb RCSB RCSB009996 ? ? WWPDB D_1000009996 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2000-11-13 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2015-06-24 5 'Structure model' 1 4 2017-10-04 6 'Structure model' 1 5 2024-02-07 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Derived calculations' 5 5 'Structure model' Advisory 6 5 'Structure model' 'Refinement description' 7 6 'Structure model' Advisory 8 6 'Structure model' 'Data collection' 9 6 'Structure model' 'Database references' 10 6 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' pdbx_unobs_or_zero_occ_atoms 2 5 'Structure model' software 3 6 'Structure model' chem_comp_atom 4 6 'Structure model' chem_comp_bond 5 6 'Structure model' database_2 6 6 'Structure model' pdbx_struct_conn_angle 7 6 'Structure model' pdbx_unobs_or_zero_occ_atoms 8 6 'Structure model' struct_conn 9 6 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_software.classification' 2 6 'Structure model' '_database_2.pdbx_DOI' 3 6 'Structure model' '_database_2.pdbx_database_accession' 4 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 5 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 7 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 8 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 9 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 10 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 11 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 12 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 13 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 14 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 15 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 16 6 'Structure model' '_pdbx_struct_conn_angle.value' 17 6 'Structure model' '_struct_conn.pdbx_dist_value' 18 6 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 19 6 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 20 6 'Structure model' '_struct_conn.ptnr1_label_asym_id' 21 6 'Structure model' '_struct_conn.ptnr1_label_atom_id' 22 6 'Structure model' '_struct_conn.ptnr1_label_comp_id' 23 6 'Structure model' '_struct_conn.ptnr1_label_seq_id' 24 6 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 25 6 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 26 6 'Structure model' '_struct_conn.ptnr2_label_asym_id' 27 6 'Structure model' '_struct_conn.ptnr2_label_atom_id' 28 6 'Structure model' '_struct_conn.ptnr2_label_comp_id' 29 6 'Structure model' '_struct_conn.ptnr2_label_seq_id' 30 6 'Structure model' '_struct_site.pdbx_auth_asym_id' 31 6 'Structure model' '_struct_site.pdbx_auth_comp_id' 32 6 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1DDK _pdbx_database_status.recvd_initial_deposition_date 1999-11-10 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry . _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1DD6 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Concha, N.O.' 1 'Janson, C.A.' 2 'Rowling, P.' 3 'Pearson, S.' 4 'Cheever, C.A.' 5 'Clarke, B.P.' 6 'Lewis, C.' 7 'Galleni, M.' 8 'Frere, J.M.' 9 'Payne, D.J.' 10 'Bateson, J.H.' 11 'Abdel-Meguid, S.S.' 12 # _citation.id primary _citation.title ;Crystal structure of the IMP-1 metallo beta-lactamase from Pseudomonas aeruginosa and its complex with a mercaptocarboxylate inhibitor: binding determinants of a potent, broad-spectrum inhibitor. ; _citation.journal_abbrev Biochemistry _citation.journal_volume 39 _citation.page_first 4288 _citation.page_last 4298 _citation.year 2000 _citation.journal_id_ASTM BICHAW _citation.country US _citation.journal_id_ISSN 0006-2960 _citation.journal_id_CSD 0033 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 10757977 _citation.pdbx_database_id_DOI 10.1021/bi992569m # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Concha, N.O.' 1 ? primary 'Janson, C.A.' 2 ? primary 'Rowling, P.' 3 ? primary 'Pearson, S.' 4 ? primary 'Cheever, C.A.' 5 ? primary 'Clarke, B.P.' 6 ? primary 'Lewis, C.' 7 ? primary 'Galleni, M.' 8 ? primary 'Frere, J.M.' 9 ? primary 'Payne, D.J.' 10 ? primary 'Bateson, J.H.' 11 ? primary 'Abdel-Meguid, S.S.' 12 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'IMP-1 METALLO BETA-LACTAMASE' 24334.750 1 3.5.2.6 ? ? ? 2 non-polymer syn 'ZINC ION' 65.409 2 ? ? ? ? 3 non-polymer syn 'ACETIC ACID' 60.052 1 ? ? ? ? 4 water nat water 18.015 1 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;ESLPDLKIEKLDEGVYVHTSFEEVNGWGVVPKHGLVVLVNAEAYLIDTPFTAKDTEKLVTWFVERGYKIKGSISSHFHSD STGGIEWLNSRSIPTYASELTNELLKKDGKVQATNSFSGVNYWLVKNKIEVFYPGPGHTPDNVVVWLPERKILFGGCFIK PYGLGNLGDANIEAWPKSAKLLKSKYGKAKLVVPSHSEVGDASLLKLTLEQAVKGLNESK ; _entity_poly.pdbx_seq_one_letter_code_can ;ESLPDLKIEKLDEGVYVHTSFEEVNGWGVVPKHGLVVLVNAEAYLIDTPFTAKDTEKLVTWFVERGYKIKGSISSHFHSD STGGIEWLNSRSIPTYASELTNELLKKDGKVQATNSFSGVNYWLVKNKIEVFYPGPGHTPDNVVVWLPERKILFGGCFIK PYGLGNLGDANIEAWPKSAKLLKSKYGKAKLVVPSHSEVGDASLLKLTLEQAVKGLNESK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'ZINC ION' ZN 3 'ACETIC ACID' ACY 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLU n 1 2 SER n 1 3 LEU n 1 4 PRO n 1 5 ASP n 1 6 LEU n 1 7 LYS n 1 8 ILE n 1 9 GLU n 1 10 LYS n 1 11 LEU n 1 12 ASP n 1 13 GLU n 1 14 GLY n 1 15 VAL n 1 16 TYR n 1 17 VAL n 1 18 HIS n 1 19 THR n 1 20 SER n 1 21 PHE n 1 22 GLU n 1 23 GLU n 1 24 VAL n 1 25 ASN n 1 26 GLY n 1 27 TRP n 1 28 GLY n 1 29 VAL n 1 30 VAL n 1 31 PRO n 1 32 LYS n 1 33 HIS n 1 34 GLY n 1 35 LEU n 1 36 VAL n 1 37 VAL n 1 38 LEU n 1 39 VAL n 1 40 ASN n 1 41 ALA n 1 42 GLU n 1 43 ALA n 1 44 TYR n 1 45 LEU n 1 46 ILE n 1 47 ASP n 1 48 THR n 1 49 PRO n 1 50 PHE n 1 51 THR n 1 52 ALA n 1 53 LYS n 1 54 ASP n 1 55 THR n 1 56 GLU n 1 57 LYS n 1 58 LEU n 1 59 VAL n 1 60 THR n 1 61 TRP n 1 62 PHE n 1 63 VAL n 1 64 GLU n 1 65 ARG n 1 66 GLY n 1 67 TYR n 1 68 LYS n 1 69 ILE n 1 70 LYS n 1 71 GLY n 1 72 SER n 1 73 ILE n 1 74 SER n 1 75 SER n 1 76 HIS n 1 77 PHE n 1 78 HIS n 1 79 SER n 1 80 ASP n 1 81 SER n 1 82 THR n 1 83 GLY n 1 84 GLY n 1 85 ILE n 1 86 GLU n 1 87 TRP n 1 88 LEU n 1 89 ASN n 1 90 SER n 1 91 ARG n 1 92 SER n 1 93 ILE n 1 94 PRO n 1 95 THR n 1 96 TYR n 1 97 ALA n 1 98 SER n 1 99 GLU n 1 100 LEU n 1 101 THR n 1 102 ASN n 1 103 GLU n 1 104 LEU n 1 105 LEU n 1 106 LYS n 1 107 LYS n 1 108 ASP n 1 109 GLY n 1 110 LYS n 1 111 VAL n 1 112 GLN n 1 113 ALA n 1 114 THR n 1 115 ASN n 1 116 SER n 1 117 PHE n 1 118 SER n 1 119 GLY n 1 120 VAL n 1 121 ASN n 1 122 TYR n 1 123 TRP n 1 124 LEU n 1 125 VAL n 1 126 LYS n 1 127 ASN n 1 128 LYS n 1 129 ILE n 1 130 GLU n 1 131 VAL n 1 132 PHE n 1 133 TYR n 1 134 PRO n 1 135 GLY n 1 136 PRO n 1 137 GLY n 1 138 HIS n 1 139 THR n 1 140 PRO n 1 141 ASP n 1 142 ASN n 1 143 VAL n 1 144 VAL n 1 145 VAL n 1 146 TRP n 1 147 LEU n 1 148 PRO n 1 149 GLU n 1 150 ARG n 1 151 LYS n 1 152 ILE n 1 153 LEU n 1 154 PHE n 1 155 GLY n 1 156 GLY n 1 157 CYS n 1 158 PHE n 1 159 ILE n 1 160 LYS n 1 161 PRO n 1 162 TYR n 1 163 GLY n 1 164 LEU n 1 165 GLY n 1 166 ASN n 1 167 LEU n 1 168 GLY n 1 169 ASP n 1 170 ALA n 1 171 ASN n 1 172 ILE n 1 173 GLU n 1 174 ALA n 1 175 TRP n 1 176 PRO n 1 177 LYS n 1 178 SER n 1 179 ALA n 1 180 LYS n 1 181 LEU n 1 182 LEU n 1 183 LYS n 1 184 SER n 1 185 LYS n 1 186 TYR n 1 187 GLY n 1 188 LYS n 1 189 ALA n 1 190 LYS n 1 191 LEU n 1 192 VAL n 1 193 VAL n 1 194 PRO n 1 195 SER n 1 196 HIS n 1 197 SER n 1 198 GLU n 1 199 VAL n 1 200 GLY n 1 201 ASP n 1 202 ALA n 1 203 SER n 1 204 LEU n 1 205 LEU n 1 206 LYS n 1 207 LEU n 1 208 THR n 1 209 LEU n 1 210 GLU n 1 211 GLN n 1 212 ALA n 1 213 VAL n 1 214 LYS n 1 215 GLY n 1 216 LEU n 1 217 ASN n 1 218 GLU n 1 219 SER n 1 220 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Pseudomonas _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Pseudomonas aeruginosa' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 287 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector PET _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACY non-polymer . 'ACETIC ACID' ? 'C2 H4 O2' 60.052 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLU 1 2 2 GLU GLU A . n A 1 2 SER 2 3 3 SER SER A . n A 1 3 LEU 3 4 4 LEU LEU A . n A 1 4 PRO 4 5 5 PRO PRO A . n A 1 5 ASP 5 6 6 ASP ASP A . n A 1 6 LEU 6 7 7 LEU LEU A . n A 1 7 LYS 7 8 8 LYS LYS A . n A 1 8 ILE 8 9 9 ILE ILE A . n A 1 9 GLU 9 10 10 GLU GLU A . n A 1 10 LYS 10 11 11 LYS LYS A . n A 1 11 LEU 11 12 12 LEU LEU A . n A 1 12 ASP 12 13 13 ASP ASP A . n A 1 13 GLU 13 14 14 GLU GLU A . n A 1 14 GLY 14 15 15 GLY GLY A . n A 1 15 VAL 15 16 16 VAL VAL A . n A 1 16 TYR 16 17 17 TYR TYR A . n A 1 17 VAL 17 18 18 VAL VAL A . n A 1 18 HIS 18 19 19 HIS HIS A . n A 1 19 THR 19 20 20 THR THR A . n A 1 20 SER 20 21 21 SER SER A . n A 1 21 PHE 21 22 22 PHE PHE A . n A 1 22 GLU 22 23 23 GLU GLU A . n A 1 23 GLU 23 24 24 GLU GLU A . n A 1 24 VAL 24 25 25 VAL VAL A . n A 1 25 ASN 25 26 26 ASN ASN A . n A 1 26 GLY 26 27 27 GLY GLY A . n A 1 27 TRP 27 28 28 TRP TRP A . n A 1 28 GLY 28 29 29 GLY GLY A . n A 1 29 VAL 29 30 30 VAL VAL A . n A 1 30 VAL 30 31 31 VAL VAL A . n A 1 31 PRO 31 32 32 PRO PRO A . n A 1 32 LYS 32 33 33 LYS LYS A . n A 1 33 HIS 33 34 34 HIS HIS A . n A 1 34 GLY 34 35 35 GLY GLY A . n A 1 35 LEU 35 36 36 LEU LEU A . n A 1 36 VAL 36 37 37 VAL VAL A . n A 1 37 VAL 37 38 38 VAL VAL A . n A 1 38 LEU 38 39 39 LEU LEU A . n A 1 39 VAL 39 40 40 VAL VAL A . n A 1 40 ASN 40 41 41 ASN ASN A . n A 1 41 ALA 41 42 42 ALA ALA A . n A 1 42 GLU 42 43 43 GLU GLU A . n A 1 43 ALA 43 44 44 ALA ALA A . n A 1 44 TYR 44 45 45 TYR TYR A . n A 1 45 LEU 45 46 46 LEU LEU A . n A 1 46 ILE 46 47 47 ILE ILE A . n A 1 47 ASP 47 48 48 ASP ASP A . n A 1 48 THR 48 49 49 THR THR A . n A 1 49 PRO 49 50 50 PRO PRO A . n A 1 50 PHE 50 51 51 PHE PHE A . n A 1 51 THR 51 52 52 THR THR A . n A 1 52 ALA 52 53 53 ALA ALA A . n A 1 53 LYS 53 54 54 LYS LYS A . n A 1 54 ASP 54 55 55 ASP ASP A . n A 1 55 THR 55 56 56 THR THR A . n A 1 56 GLU 56 57 57 GLU GLU A . n A 1 57 LYS 57 58 58 LYS LYS A . n A 1 58 LEU 58 59 59 LEU LEU A . n A 1 59 VAL 59 60 60 VAL VAL A . n A 1 60 THR 60 61 61 THR THR A . n A 1 61 TRP 61 62 62 TRP TRP A . n A 1 62 PHE 62 63 63 PHE PHE A . n A 1 63 VAL 63 64 64 VAL VAL A . n A 1 64 GLU 64 65 65 GLU GLU A . n A 1 65 ARG 65 66 66 ARG ARG A . n A 1 66 GLY 66 67 67 GLY GLY A . n A 1 67 TYR 67 68 68 TYR TYR A . n A 1 68 LYS 68 69 69 LYS LYS A . n A 1 69 ILE 69 70 70 ILE ILE A . n A 1 70 LYS 70 71 71 LYS LYS A . n A 1 71 GLY 71 72 72 GLY GLY A . n A 1 72 SER 72 73 73 SER SER A . n A 1 73 ILE 73 74 74 ILE ILE A . n A 1 74 SER 74 75 75 SER SER A . n A 1 75 SER 75 76 76 SER SER A . n A 1 76 HIS 76 77 77 HIS HIS A . n A 1 77 PHE 77 78 78 PHE PHE A . n A 1 78 HIS 78 79 79 HIS HIS A . n A 1 79 SER 79 80 80 SER SER A . n A 1 80 ASP 80 81 81 ASP ASP A . n A 1 81 SER 81 82 82 SER SER A . n A 1 82 THR 82 83 83 THR THR A . n A 1 83 GLY 83 84 84 GLY GLY A . n A 1 84 GLY 84 85 85 GLY GLY A . n A 1 85 ILE 85 86 86 ILE ILE A . n A 1 86 GLU 86 87 87 GLU GLU A . n A 1 87 TRP 87 88 88 TRP TRP A . n A 1 88 LEU 88 89 89 LEU LEU A . n A 1 89 ASN 89 90 90 ASN ASN A . n A 1 90 SER 90 91 91 SER SER A . n A 1 91 ARG 91 92 92 ARG ARG A . n A 1 92 SER 92 93 93 SER SER A . n A 1 93 ILE 93 94 94 ILE ILE A . n A 1 94 PRO 94 95 95 PRO PRO A . n A 1 95 THR 95 96 96 THR THR A . n A 1 96 TYR 96 97 97 TYR TYR A . n A 1 97 ALA 97 98 98 ALA ALA A . n A 1 98 SER 98 99 99 SER SER A . n A 1 99 GLU 99 100 100 GLU GLU A . n A 1 100 LEU 100 101 101 LEU LEU A . n A 1 101 THR 101 102 102 THR THR A . n A 1 102 ASN 102 103 103 ASN ASN A . n A 1 103 GLU 103 104 104 GLU GLU A . n A 1 104 LEU 104 105 105 LEU LEU A . n A 1 105 LEU 105 106 106 LEU LEU A . n A 1 106 LYS 106 107 107 LYS LYS A . n A 1 107 LYS 107 108 108 LYS LYS A . n A 1 108 ASP 108 109 109 ASP ASP A . n A 1 109 GLY 109 110 110 GLY GLY A . n A 1 110 LYS 110 111 111 LYS LYS A . n A 1 111 VAL 111 112 112 VAL VAL A . n A 1 112 GLN 112 113 113 GLN GLN A . n A 1 113 ALA 113 114 114 ALA ALA A . n A 1 114 THR 114 115 115 THR THR A . n A 1 115 ASN 115 116 116 ASN ASN A . n A 1 116 SER 116 117 117 SER SER A . n A 1 117 PHE 117 118 118 PHE PHE A . n A 1 118 SER 118 119 119 SER SER A . n A 1 119 GLY 119 120 120 GLY GLY A . n A 1 120 VAL 120 121 121 VAL VAL A . n A 1 121 ASN 121 122 122 ASN ASN A . n A 1 122 TYR 122 123 123 TYR TYR A . n A 1 123 TRP 123 124 124 TRP TRP A . n A 1 124 LEU 124 125 125 LEU LEU A . n A 1 125 VAL 125 126 126 VAL VAL A . n A 1 126 LYS 126 127 127 LYS LYS A . n A 1 127 ASN 127 128 128 ASN ASN A . n A 1 128 LYS 128 129 129 LYS LYS A . n A 1 129 ILE 129 130 130 ILE ILE A . n A 1 130 GLU 130 131 131 GLU GLU A . n A 1 131 VAL 131 132 132 VAL VAL A . n A 1 132 PHE 132 133 133 PHE PHE A . n A 1 133 TYR 133 134 134 TYR TYR A . n A 1 134 PRO 134 135 135 PRO PRO A . n A 1 135 GLY 135 136 136 GLY GLY A . n A 1 136 PRO 136 137 137 PRO PRO A . n A 1 137 GLY 137 138 138 GLY GLY A . n A 1 138 HIS 138 139 139 HIS HIS A . n A 1 139 THR 139 140 140 THR THR A . n A 1 140 PRO 140 141 141 PRO PRO A . n A 1 141 ASP 141 142 142 ASP ASP A . n A 1 142 ASN 142 143 143 ASN ASN A . n A 1 143 VAL 143 144 144 VAL VAL A . n A 1 144 VAL 144 145 145 VAL VAL A . n A 1 145 VAL 145 146 146 VAL VAL A . n A 1 146 TRP 146 147 147 TRP TRP A . n A 1 147 LEU 147 148 148 LEU LEU A . n A 1 148 PRO 148 149 149 PRO PRO A . n A 1 149 GLU 149 150 150 GLU GLU A . n A 1 150 ARG 150 151 151 ARG ARG A . n A 1 151 LYS 151 152 152 LYS LYS A . n A 1 152 ILE 152 153 153 ILE ILE A . n A 1 153 LEU 153 154 154 LEU LEU A . n A 1 154 PHE 154 155 155 PHE PHE A . n A 1 155 GLY 155 156 156 GLY GLY A . n A 1 156 GLY 156 157 157 GLY GLY A . n A 1 157 CYS 157 158 158 CYS CYS A . n A 1 158 PHE 158 159 159 PHE PHE A . n A 1 159 ILE 159 160 160 ILE ILE A . n A 1 160 LYS 160 161 161 LYS LYS A . n A 1 161 PRO 161 162 162 PRO PRO A . n A 1 162 TYR 162 163 163 TYR TYR A . n A 1 163 GLY 163 164 164 GLY GLY A . n A 1 164 LEU 164 165 165 LEU LEU A . n A 1 165 GLY 165 166 166 GLY GLY A . n A 1 166 ASN 166 167 167 ASN ASN A . n A 1 167 LEU 167 168 168 LEU LEU A . n A 1 168 GLY 168 169 169 GLY GLY A . n A 1 169 ASP 169 170 170 ASP ASP A . n A 1 170 ALA 170 171 171 ALA ALA A . n A 1 171 ASN 171 172 172 ASN ASN A . n A 1 172 ILE 172 173 173 ILE ILE A . n A 1 173 GLU 173 174 174 GLU GLU A . n A 1 174 ALA 174 175 175 ALA ALA A . n A 1 175 TRP 175 176 176 TRP TRP A . n A 1 176 PRO 176 177 177 PRO PRO A . n A 1 177 LYS 177 178 178 LYS LYS A . n A 1 178 SER 178 179 179 SER SER A . n A 1 179 ALA 179 180 180 ALA ALA A . n A 1 180 LYS 180 181 181 LYS LYS A . n A 1 181 LEU 181 182 182 LEU LEU A . n A 1 182 LEU 182 183 183 LEU LEU A . n A 1 183 LYS 183 184 184 LYS LYS A . n A 1 184 SER 184 185 185 SER SER A . n A 1 185 LYS 185 186 186 LYS LYS A . n A 1 186 TYR 186 187 187 TYR TYR A . n A 1 187 GLY 187 188 188 GLY GLY A . n A 1 188 LYS 188 189 189 LYS LYS A . n A 1 189 ALA 189 190 190 ALA ALA A . n A 1 190 LYS 190 191 191 LYS LYS A . n A 1 191 LEU 191 192 192 LEU LEU A . n A 1 192 VAL 192 193 193 VAL VAL A . n A 1 193 VAL 193 194 194 VAL VAL A . n A 1 194 PRO 194 195 195 PRO PRO A . n A 1 195 SER 195 196 196 SER SER A . n A 1 196 HIS 196 197 197 HIS HIS A . n A 1 197 SER 197 198 198 SER SER A . n A 1 198 GLU 198 199 199 GLU GLU A . n A 1 199 VAL 199 200 200 VAL VAL A . n A 1 200 GLY 200 201 201 GLY GLY A . n A 1 201 ASP 201 202 202 ASP ASP A . n A 1 202 ALA 202 203 203 ALA ALA A . n A 1 203 SER 203 204 204 SER SER A . n A 1 204 LEU 204 205 205 LEU LEU A . n A 1 205 LEU 205 206 206 LEU LEU A . n A 1 206 LYS 206 207 207 LYS LYS A . n A 1 207 LEU 207 208 208 LEU LEU A . n A 1 208 THR 208 209 209 THR THR A . n A 1 209 LEU 209 210 210 LEU LEU A . n A 1 210 GLU 210 211 211 GLU GLU A . n A 1 211 GLN 211 212 212 GLN GLN A . n A 1 212 ALA 212 213 213 ALA ALA A . n A 1 213 VAL 213 214 214 VAL VAL A . n A 1 214 LYS 214 215 215 LYS LYS A . n A 1 215 GLY 215 216 216 GLY GLY A . n A 1 216 LEU 216 217 217 LEU LEU A . n A 1 217 ASN 217 218 218 ASN ASN A . n A 1 218 GLU 218 219 219 GLU GLU A . n A 1 219 SER 219 220 220 SER SER A . n A 1 220 LYS 220 221 221 LYS LYS A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN 1 500 500 ZN ZN A . C 2 ZN 1 501 501 ZN ZN A . D 3 ACY 1 510 510 ACY ACE A . E 4 HOH 1 514 514 HOH WAT A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 0 A GLU 23 ? CB ? A GLU 22 CB 2 1 Y 0 A VAL 145 ? CG1 ? A VAL 144 CG1 3 1 Y 0 A VAL 145 ? CG2 ? A VAL 144 CG2 4 1 Y 0 A LYS 189 ? CG ? A LYS 188 CG 5 1 Y 0 A LYS 189 ? CD ? A LYS 188 CD 6 1 Y 0 A LYS 189 ? CE ? A LYS 188 CE 7 1 Y 0 A LYS 189 ? NZ ? A LYS 188 NZ 8 1 Y 0 A GLN 212 ? CG ? A GLN 211 CG 9 1 Y 0 A GLN 212 ? CD ? A GLN 211 CD 10 1 Y 0 A GLN 212 ? OE1 ? A GLN 211 OE1 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CCP4 'model building' . ? 1 CNS refinement 0.5 ? 2 FRAMBO 'data collection' . ? 3 XDS 'data scaling' . ? 4 CCP4 phasing . ? 5 # _cell.entry_id 1DDK _cell.length_a 50.300 _cell.length_b 105.800 _cell.length_c 112.300 _cell.angle_alpha 90.00 _cell.angle_beta 93.90 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 1DDK _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # _exptl.entry_id 1DDK _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details 293-295 _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details ;drop contained 5 uL protein (14mg/mL in 20mM HEPES, pH 7.5) with 5 uL reservoir (0.2M sodium acetate, 30% PEG4000, 0.1M sodium citrate pH 5.6). Crystal grew as plates after 2 weeks., pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 298 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'AREA DETECTOR' _diffrn_detector.type 'SIEMENS X1000' _diffrn_detector.pdbx_collection_date 1997-02-20 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RU300' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1DDK _reflns.observed_criterion_sigma_I 2 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 20.0 _reflns.d_resolution_high 3.0 _reflns.number_obs 19288 _reflns.percent_possible_obs 90.1 _reflns.pdbx_Rmerge_I_obs 0.140 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate 34 _reflns.pdbx_redundancy 1.6 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 _reflns.number_all ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? # _reflns_shell.d_res_high 3.0 _reflns_shell.d_res_low 3.1 _reflns_shell.percent_possible_all 56.6 _reflns_shell.Rmerge_I_obs 0.249 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 0 _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? # _refine.entry_id 1DDK _refine.ls_number_reflns_obs 19263 _refine.ls_number_reflns_all 0 _refine.pdbx_ls_sigma_I 0 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF 784186.53 _refine.pdbx_data_cutoff_low_absF 0.00 _refine.ls_d_res_low 20.0 _refine.ls_d_res_high 3.10 _refine.ls_percent_reflns_obs 90.2 _refine.ls_R_factor_obs 0.255 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.255 _refine.ls_R_factor_R_free 0.288 _refine.ls_R_factor_R_free_error 0.007 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 9.9 _refine.ls_number_reflns_R_free 1898 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean 16.9 _refine.aniso_B[1][1] -6.64 _refine.aniso_B[2][2] -0.99 _refine.aniso_B[3][3] 7.62 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] -2.41 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.294 _refine.solvent_model_param_bsol 18.13 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_phase_error ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1DDK _refine_analyze.Luzzati_coordinate_error_obs 0.44 _refine_analyze.Luzzati_sigma_a_obs 0.65 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.52 _refine_analyze.Luzzati_sigma_a_free 0.74 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1722 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 6 _refine_hist.number_atoms_solvent 1 _refine_hist.number_atoms_total 1729 _refine_hist.d_res_high 3.10 _refine_hist.d_res_low 20.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.013 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.8 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 24.4 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 1.32 ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 2.68 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 4.40 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 3.64 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 5.63 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_restr_ncs.dom_id 1 _refine_ls_restr_ncs.ncs_model_details CONSTR _refine_ls_restr_ncs.rms_dev_position ? _refine_ls_restr_ncs.weight_position ? _refine_ls_restr_ncs.rms_dev_B_iso ? _refine_ls_restr_ncs.weight_B_iso ? _refine_ls_restr_ncs.pdbx_type . _refine_ls_restr_ncs.pdbx_auth_asym_id . _refine_ls_restr_ncs.pdbx_ens_id 1 _refine_ls_restr_ncs.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_restr_ncs.pdbx_ordinal 1 _refine_ls_restr_ncs.pdbx_number ? _refine_ls_restr_ncs.pdbx_asym_id ? _refine_ls_restr_ncs.pdbx_rms ? _refine_ls_restr_ncs.pdbx_weight ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 3.10 _refine_ls_shell.d_res_low 3.29 _refine_ls_shell.number_reflns_R_work 2221 _refine_ls_shell.R_factor_R_work 0.346 _refine_ls_shell.percent_reflns_obs 69.4 _refine_ls_shell.R_factor_R_free 0.383 _refine_ls_shell.R_factor_R_free_error 0.025 _refine_ls_shell.percent_reflns_R_free 9.2 _refine_ls_shell.number_reflns_R_free 226 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PROTEIN_REP.PA PROTEIN.TOP 'X-RAY DIFFRACTION' 2 ACE.PAR ACE.TOP 'X-RAY DIFFRACTION' 3 ION.PARAM WATER_REP.TOP 'X-RAY DIFFRACTION' 4 WATER_REP.PARA ION.TOP 'X-RAY DIFFRACTION' # loop_ _struct_ncs_oper.id _struct_ncs_oper.code _struct_ncs_oper.details _struct_ncs_oper.matrix[1][1] _struct_ncs_oper.matrix[1][2] _struct_ncs_oper.matrix[1][3] _struct_ncs_oper.matrix[2][1] _struct_ncs_oper.matrix[2][2] _struct_ncs_oper.matrix[2][3] _struct_ncs_oper.matrix[3][1] _struct_ncs_oper.matrix[3][2] _struct_ncs_oper.matrix[3][3] _struct_ncs_oper.vector[1] _struct_ncs_oper.vector[2] _struct_ncs_oper.vector[3] 1 given ? 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 2 generate ? -0.999950 -0.009400 0.002900 -0.009330 0.999660 0.024230 -0.003130 0.024200 -0.999700 21.18934 3.13500 56.24181 3 generate ? -0.999920 0.002960 0.011900 -0.003030 -0.999980 -0.005250 0.011880 -0.005280 0.999920 16.96566 29.75573 -0.48440 4 generate ? 0.999880 0.009670 0.012360 0.009490 -0.999850 0.014650 0.012500 -0.014530 -0.999820 3.12039 32.94323 56.37651 # _struct_ncs_dom.id 1 _struct_ncs_dom.pdbx_ens_id 1 _struct_ncs_dom.details ? # _struct_ncs_ens.id 1 _struct_ncs_ens.details ? # _database_PDB_matrix.entry_id 1DDK _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1DDK _struct.title 'CRYSTAL STRUCTURE OF IMP-1 METALLO BETA-LACTAMASE FROM PSEUDOMONAS AERUGINOSA' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1DDK _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'IMP-1 METALLO BETA-LACTAMASE, BINUCLEAR METAL CENTER, ZN BETA-LACTAMASE, HYDROLASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q932P5_9GAMM _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession Q932P5 _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1DDK _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 220 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q932P5 _struct_ref_seq.db_align_beg 20 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 239 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 2 _struct_ref_seq.pdbx_auth_seq_align_end 221 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 51 ? ARG A 65 ? THR A 52 ARG A 66 1 ? 15 HELX_P HELX_P2 2 HIS A 78 ? GLY A 83 ? HIS A 79 GLY A 84 1 ? 6 HELX_P HELX_P3 3 GLY A 84 ? ARG A 91 ? GLY A 85 ARG A 92 1 ? 8 HELX_P HELX_P4 4 LEU A 100 ? ASP A 108 ? LEU A 101 ASP A 109 1 ? 9 HELX_P HELX_P5 5 GLY A 156 ? ILE A 159 ? GLY A 157 ILE A 160 5 ? 4 HELX_P HELX_P6 6 ALA A 174 ? TYR A 186 ? ALA A 175 TYR A 187 1 ? 13 HELX_P HELX_P7 7 ALA A 202 ? GLU A 218 ? ALA A 203 GLU A 219 1 ? 17 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A HIS 76 NE2 ? ? ? 1_555 B ZN . ZN ? ? A HIS 77 A ZN 500 1_555 ? ? ? ? ? ? ? 2.284 ? ? metalc2 metalc ? ? A HIS 78 ND1 ? ? ? 1_555 B ZN . ZN ? ? A HIS 79 A ZN 500 1_555 ? ? ? ? ? ? ? 2.328 ? ? metalc3 metalc ? ? A ASP 80 OD2 ? ? ? 1_555 C ZN . ZN ? ? A ASP 81 A ZN 501 1_555 ? ? ? ? ? ? ? 2.545 ? ? metalc4 metalc ? ? A HIS 138 NE2 ? ? ? 1_555 B ZN . ZN ? ? A HIS 139 A ZN 500 1_555 ? ? ? ? ? ? ? 2.136 ? ? metalc5 metalc ? ? A CYS 157 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 158 A ZN 501 1_555 ? ? ? ? ? ? ? 2.404 ? ? metalc6 metalc ? ? A HIS 196 NE2 ? ? ? 1_555 C ZN . ZN ? ? A HIS 197 A ZN 501 1_555 ? ? ? ? ? ? ? 2.330 ? ? metalc7 metalc ? ? C ZN . ZN ? ? ? 1_555 E HOH . O ? ? A ZN 501 A HOH 514 1_555 ? ? ? ? ? ? ? 2.574 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 NE2 ? A HIS 76 ? A HIS 77 ? 1_555 ZN ? B ZN . ? A ZN 500 ? 1_555 ND1 ? A HIS 78 ? A HIS 79 ? 1_555 71.9 ? 2 NE2 ? A HIS 76 ? A HIS 77 ? 1_555 ZN ? B ZN . ? A ZN 500 ? 1_555 NE2 ? A HIS 138 ? A HIS 139 ? 1_555 106.6 ? 3 ND1 ? A HIS 78 ? A HIS 79 ? 1_555 ZN ? B ZN . ? A ZN 500 ? 1_555 NE2 ? A HIS 138 ? A HIS 139 ? 1_555 103.4 ? 4 OD2 ? A ASP 80 ? A ASP 81 ? 1_555 ZN ? C ZN . ? A ZN 501 ? 1_555 SG ? A CYS 157 ? A CYS 158 ? 1_555 64.3 ? 5 OD2 ? A ASP 80 ? A ASP 81 ? 1_555 ZN ? C ZN . ? A ZN 501 ? 1_555 NE2 ? A HIS 196 ? A HIS 197 ? 1_555 88.2 ? 6 SG ? A CYS 157 ? A CYS 158 ? 1_555 ZN ? C ZN . ? A ZN 501 ? 1_555 NE2 ? A HIS 196 ? A HIS 197 ? 1_555 76.0 ? 7 OD2 ? A ASP 80 ? A ASP 81 ? 1_555 ZN ? C ZN . ? A ZN 501 ? 1_555 O ? E HOH . ? A HOH 514 ? 1_555 174.2 ? 8 SG ? A CYS 157 ? A CYS 158 ? 1_555 ZN ? C ZN . ? A ZN 501 ? 1_555 O ? E HOH . ? A HOH 514 ? 1_555 114.4 ? 9 NE2 ? A HIS 196 ? A HIS 197 ? 1_555 ZN ? C ZN . ? A ZN 501 ? 1_555 O ? E HOH . ? A HOH 514 ? 1_555 97.0 ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 7 ? B ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? parallel A 5 6 ? parallel A 6 7 ? parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LYS A 7 ? ASP A 12 ? LYS A 8 ASP A 13 A 2 VAL A 15 ? GLU A 23 ? VAL A 16 GLU A 24 A 3 VAL A 29 ? LEU A 38 ? VAL A 30 LEU A 39 A 4 GLU A 42 ? ILE A 46 ? GLU A 43 ILE A 47 A 5 LYS A 68 ? ILE A 73 ? LYS A 69 ILE A 74 A 6 THR A 95 ? SER A 98 ? THR A 96 SER A 99 A 7 ASN A 115 ? PHE A 117 ? ASN A 116 PHE A 118 B 1 ASN A 121 ? VAL A 125 ? ASN A 122 VAL A 126 B 2 ILE A 129 ? PHE A 132 ? ILE A 130 PHE A 133 B 3 VAL A 144 ? LEU A 147 ? VAL A 145 LEU A 148 B 4 ILE A 152 ? PHE A 154 ? ILE A 153 PHE A 155 B 5 LEU A 191 ? VAL A 193 ? LEU A 192 VAL A 194 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 11 ? N LEU A 12 O VAL A 15 ? O VAL A 16 A 2 3 O GLU A 22 ? O GLU A 23 N VAL A 30 ? N VAL A 31 A 3 4 N VAL A 37 ? N VAL A 38 O TYR A 44 ? O TYR A 45 A 4 5 N ALA A 43 ? N ALA A 44 O LYS A 68 ? O LYS A 69 A 5 6 O SER A 72 ? O SER A 73 N TYR A 96 ? N TYR A 97 A 6 7 N ALA A 97 ? N ALA A 98 O ASN A 115 ? O ASN A 116 B 1 2 N LEU A 124 ? N LEU A 125 O ILE A 129 ? O ILE A 130 B 2 3 N PHE A 132 ? N PHE A 133 O VAL A 144 ? O VAL A 145 B 3 4 N LEU A 147 ? N LEU A 148 O ILE A 152 ? O ILE A 153 B 4 5 N LEU A 153 ? N LEU A 154 O LEU A 191 ? O LEU A 192 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ZN 500 ? 6 'BINDING SITE FOR RESIDUE ZN A 500' AC2 Software A ZN 501 ? 6 'BINDING SITE FOR RESIDUE ZN A 501' AC3 Software A ACY 510 ? 6 'BINDING SITE FOR RESIDUE ACY A 510' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 HIS A 76 ? HIS A 77 . ? 1_555 ? 2 AC1 6 HIS A 78 ? HIS A 79 . ? 1_555 ? 3 AC1 6 HIS A 138 ? HIS A 139 . ? 1_555 ? 4 AC1 6 CYS A 157 ? CYS A 158 . ? 1_555 ? 5 AC1 6 ZN C . ? ZN A 501 . ? 1_555 ? 6 AC1 6 ACY D . ? ACY A 510 . ? 1_555 ? 7 AC2 6 ASP A 80 ? ASP A 81 . ? 1_555 ? 8 AC2 6 CYS A 157 ? CYS A 158 . ? 1_555 ? 9 AC2 6 HIS A 196 ? HIS A 197 . ? 1_555 ? 10 AC2 6 ZN B . ? ZN A 500 . ? 1_555 ? 11 AC2 6 ACY D . ? ACY A 510 . ? 1_555 ? 12 AC2 6 HOH E . ? HOH A 514 . ? 1_555 ? 13 AC3 6 ASP A 80 ? ASP A 81 . ? 1_555 ? 14 AC3 6 ASN A 166 ? ASN A 167 . ? 1_555 ? 15 AC3 6 HIS A 196 ? HIS A 197 . ? 1_555 ? 16 AC3 6 ZN B . ? ZN A 500 . ? 1_555 ? 17 AC3 6 ZN C . ? ZN A 501 . ? 1_555 ? 18 AC3 6 HOH E . ? HOH A 514 . ? 1_555 ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OD2 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 ASP _pdbx_validate_close_contact.auth_seq_id_1 48 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 OG _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 SER _pdbx_validate_close_contact.auth_seq_id_2 82 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.16 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 14 ? ? -11.04 -65.66 2 1 VAL A 25 ? ? -118.83 -163.73 3 1 ASN A 26 ? ? -99.99 56.73 4 1 VAL A 40 ? ? -88.87 -79.81 5 1 ASN A 41 ? ? -111.69 -86.17 6 1 ASP A 48 ? ? 80.76 151.07 7 1 ARG A 66 ? ? -79.83 26.52 8 1 SER A 93 ? ? 38.61 59.56 9 1 LYS A 127 ? ? -34.71 -72.25 10 1 ASN A 143 ? ? -32.67 131.55 11 1 GLU A 150 ? ? -77.69 40.98 12 1 ARG A 151 ? ? -165.39 -13.02 13 1 LYS A 161 ? ? -147.00 59.21 14 1 ASN A 167 ? ? -56.94 107.14 15 1 ASP A 170 ? ? -107.40 52.81 16 1 ASN A 172 ? ? -144.86 50.82 17 1 ILE A 173 ? ? -31.46 -31.97 18 1 TYR A 187 ? ? -106.22 40.32 19 1 VAL A 200 ? ? -45.88 151.29 20 1 ALA A 203 ? ? -25.01 -32.54 21 1 GLU A 219 ? ? -60.35 9.48 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ACY C C N N 1 ACY O O N N 2 ACY OXT O N N 3 ACY CH3 C N N 4 ACY HXT H N N 5 ACY H1 H N N 6 ACY H2 H N N 7 ACY H3 H N N 8 ALA N N N N 9 ALA CA C N S 10 ALA C C N N 11 ALA O O N N 12 ALA CB C N N 13 ALA OXT O N N 14 ALA H H N N 15 ALA H2 H N N 16 ALA HA H N N 17 ALA HB1 H N N 18 ALA HB2 H N N 19 ALA HB3 H N N 20 ALA HXT H N N 21 ARG N N N N 22 ARG CA C N S 23 ARG C C N N 24 ARG O O N N 25 ARG CB C N N 26 ARG CG C N N 27 ARG CD C N N 28 ARG NE N N N 29 ARG CZ C N N 30 ARG NH1 N N N 31 ARG NH2 N N N 32 ARG OXT O N N 33 ARG H H N N 34 ARG H2 H N N 35 ARG HA H N N 36 ARG HB2 H N N 37 ARG HB3 H N N 38 ARG HG2 H N N 39 ARG HG3 H N N 40 ARG HD2 H N N 41 ARG HD3 H N N 42 ARG HE H N N 43 ARG HH11 H N N 44 ARG HH12 H N N 45 ARG HH21 H N N 46 ARG HH22 H N N 47 ARG HXT H N N 48 ASN N N N N 49 ASN CA C N S 50 ASN C C N N 51 ASN O O N N 52 ASN CB C N N 53 ASN CG C N N 54 ASN OD1 O N N 55 ASN ND2 N N N 56 ASN OXT O N N 57 ASN H H N N 58 ASN H2 H N N 59 ASN HA H N N 60 ASN HB2 H N N 61 ASN HB3 H N N 62 ASN HD21 H N N 63 ASN HD22 H N N 64 ASN HXT H N N 65 ASP N N N N 66 ASP CA C N S 67 ASP C C N N 68 ASP O O N N 69 ASP CB C N N 70 ASP CG C N N 71 ASP OD1 O N N 72 ASP OD2 O N N 73 ASP OXT O N N 74 ASP H H N N 75 ASP H2 H N N 76 ASP HA H N N 77 ASP HB2 H N N 78 ASP HB3 H N N 79 ASP HD2 H N N 80 ASP HXT H N N 81 CYS N N N N 82 CYS CA C N R 83 CYS C C N N 84 CYS O O N N 85 CYS CB C N N 86 CYS SG S N N 87 CYS OXT O N N 88 CYS H H N N 89 CYS H2 H N N 90 CYS HA H N N 91 CYS HB2 H N N 92 CYS HB3 H N N 93 CYS HG H N N 94 CYS HXT H N N 95 GLN N N N N 96 GLN CA C N S 97 GLN C C N N 98 GLN O O N N 99 GLN CB C N N 100 GLN CG C N N 101 GLN CD C N N 102 GLN OE1 O N N 103 GLN NE2 N N N 104 GLN OXT O N N 105 GLN H H N N 106 GLN H2 H N N 107 GLN HA H N N 108 GLN HB2 H N N 109 GLN HB3 H N N 110 GLN HG2 H N N 111 GLN HG3 H N N 112 GLN HE21 H N N 113 GLN HE22 H N N 114 GLN HXT H N N 115 GLU N N N N 116 GLU CA C N S 117 GLU C C N N 118 GLU O O N N 119 GLU CB C N N 120 GLU CG C N N 121 GLU CD C N N 122 GLU OE1 O N N 123 GLU OE2 O N N 124 GLU OXT O N N 125 GLU H H N N 126 GLU H2 H N N 127 GLU HA H N N 128 GLU HB2 H N N 129 GLU HB3 H N N 130 GLU HG2 H N N 131 GLU HG3 H N N 132 GLU HE2 H N N 133 GLU HXT H N N 134 GLY N N N N 135 GLY CA C N N 136 GLY C C N N 137 GLY O O N N 138 GLY OXT O N N 139 GLY H H N N 140 GLY H2 H N N 141 GLY HA2 H N N 142 GLY HA3 H N N 143 GLY HXT H N N 144 HIS N N N N 145 HIS CA C N S 146 HIS C C N N 147 HIS O O N N 148 HIS CB C N N 149 HIS CG C Y N 150 HIS ND1 N Y N 151 HIS CD2 C Y N 152 HIS CE1 C Y N 153 HIS NE2 N Y N 154 HIS OXT O N N 155 HIS H H N N 156 HIS H2 H N N 157 HIS HA H N N 158 HIS HB2 H N N 159 HIS HB3 H N N 160 HIS HD1 H N N 161 HIS HD2 H N N 162 HIS HE1 H N N 163 HIS HE2 H N N 164 HIS HXT H N N 165 HOH O O N N 166 HOH H1 H N N 167 HOH H2 H N N 168 ILE N N N N 169 ILE CA C N S 170 ILE C C N N 171 ILE O O N N 172 ILE CB C N S 173 ILE CG1 C N N 174 ILE CG2 C N N 175 ILE CD1 C N N 176 ILE OXT O N N 177 ILE H H N N 178 ILE H2 H N N 179 ILE HA H N N 180 ILE HB H N N 181 ILE HG12 H N N 182 ILE HG13 H N N 183 ILE HG21 H N N 184 ILE HG22 H N N 185 ILE HG23 H N N 186 ILE HD11 H N N 187 ILE HD12 H N N 188 ILE HD13 H N N 189 ILE HXT H N N 190 LEU N N N N 191 LEU CA C N S 192 LEU C C N N 193 LEU O O N N 194 LEU CB C N N 195 LEU CG C N N 196 LEU CD1 C N N 197 LEU CD2 C N N 198 LEU OXT O N N 199 LEU H H N N 200 LEU H2 H N N 201 LEU HA H N N 202 LEU HB2 H N N 203 LEU HB3 H N N 204 LEU HG H N N 205 LEU HD11 H N N 206 LEU HD12 H N N 207 LEU HD13 H N N 208 LEU HD21 H N N 209 LEU HD22 H N N 210 LEU HD23 H N N 211 LEU HXT H N N 212 LYS N N N N 213 LYS CA C N S 214 LYS C C N N 215 LYS O O N N 216 LYS CB C N N 217 LYS CG C N N 218 LYS CD C N N 219 LYS CE C N N 220 LYS NZ N N N 221 LYS OXT O N N 222 LYS H H N N 223 LYS H2 H N N 224 LYS HA H N N 225 LYS HB2 H N N 226 LYS HB3 H N N 227 LYS HG2 H N N 228 LYS HG3 H N N 229 LYS HD2 H N N 230 LYS HD3 H N N 231 LYS HE2 H N N 232 LYS HE3 H N N 233 LYS HZ1 H N N 234 LYS HZ2 H N N 235 LYS HZ3 H N N 236 LYS HXT H N N 237 PHE N N N N 238 PHE CA C N S 239 PHE C C N N 240 PHE O O N N 241 PHE CB C N N 242 PHE CG C Y N 243 PHE CD1 C Y N 244 PHE CD2 C Y N 245 PHE CE1 C Y N 246 PHE CE2 C Y N 247 PHE CZ C Y N 248 PHE OXT O N N 249 PHE H H N N 250 PHE H2 H N N 251 PHE HA H N N 252 PHE HB2 H N N 253 PHE HB3 H N N 254 PHE HD1 H N N 255 PHE HD2 H N N 256 PHE HE1 H N N 257 PHE HE2 H N N 258 PHE HZ H N N 259 PHE HXT H N N 260 PRO N N N N 261 PRO CA C N S 262 PRO C C N N 263 PRO O O N N 264 PRO CB C N N 265 PRO CG C N N 266 PRO CD C N N 267 PRO OXT O N N 268 PRO H H N N 269 PRO HA H N N 270 PRO HB2 H N N 271 PRO HB3 H N N 272 PRO HG2 H N N 273 PRO HG3 H N N 274 PRO HD2 H N N 275 PRO HD3 H N N 276 PRO HXT H N N 277 SER N N N N 278 SER CA C N S 279 SER C C N N 280 SER O O N N 281 SER CB C N N 282 SER OG O N N 283 SER OXT O N N 284 SER H H N N 285 SER H2 H N N 286 SER HA H N N 287 SER HB2 H N N 288 SER HB3 H N N 289 SER HG H N N 290 SER HXT H N N 291 THR N N N N 292 THR CA C N S 293 THR C C N N 294 THR O O N N 295 THR CB C N R 296 THR OG1 O N N 297 THR CG2 C N N 298 THR OXT O N N 299 THR H H N N 300 THR H2 H N N 301 THR HA H N N 302 THR HB H N N 303 THR HG1 H N N 304 THR HG21 H N N 305 THR HG22 H N N 306 THR HG23 H N N 307 THR HXT H N N 308 TRP N N N N 309 TRP CA C N S 310 TRP C C N N 311 TRP O O N N 312 TRP CB C N N 313 TRP CG C Y N 314 TRP CD1 C Y N 315 TRP CD2 C Y N 316 TRP NE1 N Y N 317 TRP CE2 C Y N 318 TRP CE3 C Y N 319 TRP CZ2 C Y N 320 TRP CZ3 C Y N 321 TRP CH2 C Y N 322 TRP OXT O N N 323 TRP H H N N 324 TRP H2 H N N 325 TRP HA H N N 326 TRP HB2 H N N 327 TRP HB3 H N N 328 TRP HD1 H N N 329 TRP HE1 H N N 330 TRP HE3 H N N 331 TRP HZ2 H N N 332 TRP HZ3 H N N 333 TRP HH2 H N N 334 TRP HXT H N N 335 TYR N N N N 336 TYR CA C N S 337 TYR C C N N 338 TYR O O N N 339 TYR CB C N N 340 TYR CG C Y N 341 TYR CD1 C Y N 342 TYR CD2 C Y N 343 TYR CE1 C Y N 344 TYR CE2 C Y N 345 TYR CZ C Y N 346 TYR OH O N N 347 TYR OXT O N N 348 TYR H H N N 349 TYR H2 H N N 350 TYR HA H N N 351 TYR HB2 H N N 352 TYR HB3 H N N 353 TYR HD1 H N N 354 TYR HD2 H N N 355 TYR HE1 H N N 356 TYR HE2 H N N 357 TYR HH H N N 358 TYR HXT H N N 359 VAL N N N N 360 VAL CA C N S 361 VAL C C N N 362 VAL O O N N 363 VAL CB C N N 364 VAL CG1 C N N 365 VAL CG2 C N N 366 VAL OXT O N N 367 VAL H H N N 368 VAL H2 H N N 369 VAL HA H N N 370 VAL HB H N N 371 VAL HG11 H N N 372 VAL HG12 H N N 373 VAL HG13 H N N 374 VAL HG21 H N N 375 VAL HG22 H N N 376 VAL HG23 H N N 377 VAL HXT H N N 378 ZN ZN ZN N N 379 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ACY C O doub N N 1 ACY C OXT sing N N 2 ACY C CH3 sing N N 3 ACY OXT HXT sing N N 4 ACY CH3 H1 sing N N 5 ACY CH3 H2 sing N N 6 ACY CH3 H3 sing N N 7 ALA N CA sing N N 8 ALA N H sing N N 9 ALA N H2 sing N N 10 ALA CA C sing N N 11 ALA CA CB sing N N 12 ALA CA HA sing N N 13 ALA C O doub N N 14 ALA C OXT sing N N 15 ALA CB HB1 sing N N 16 ALA CB HB2 sing N N 17 ALA CB HB3 sing N N 18 ALA OXT HXT sing N N 19 ARG N CA sing N N 20 ARG N H sing N N 21 ARG N H2 sing N N 22 ARG CA C sing N N 23 ARG CA CB sing N N 24 ARG CA HA sing N N 25 ARG C O doub N N 26 ARG C OXT sing N N 27 ARG CB CG sing N N 28 ARG CB HB2 sing N N 29 ARG CB HB3 sing N N 30 ARG CG CD sing N N 31 ARG CG HG2 sing N N 32 ARG CG HG3 sing N N 33 ARG CD NE sing N N 34 ARG CD HD2 sing N N 35 ARG CD HD3 sing N N 36 ARG NE CZ sing N N 37 ARG NE HE sing N N 38 ARG CZ NH1 sing N N 39 ARG CZ NH2 doub N N 40 ARG NH1 HH11 sing N N 41 ARG NH1 HH12 sing N N 42 ARG NH2 HH21 sing N N 43 ARG NH2 HH22 sing N N 44 ARG OXT HXT sing N N 45 ASN N CA sing N N 46 ASN N H sing N N 47 ASN N H2 sing N N 48 ASN CA C sing N N 49 ASN CA CB sing N N 50 ASN CA HA sing N N 51 ASN C O doub N N 52 ASN C OXT sing N N 53 ASN CB CG sing N N 54 ASN CB HB2 sing N N 55 ASN CB HB3 sing N N 56 ASN CG OD1 doub N N 57 ASN CG ND2 sing N N 58 ASN ND2 HD21 sing N N 59 ASN ND2 HD22 sing N N 60 ASN OXT HXT sing N N 61 ASP N CA sing N N 62 ASP N H sing N N 63 ASP N H2 sing N N 64 ASP CA C sing N N 65 ASP CA CB sing N N 66 ASP CA HA sing N N 67 ASP C O doub N N 68 ASP C OXT sing N N 69 ASP CB CG sing N N 70 ASP CB HB2 sing N N 71 ASP CB HB3 sing N N 72 ASP CG OD1 doub N N 73 ASP CG OD2 sing N N 74 ASP OD2 HD2 sing N N 75 ASP OXT HXT sing N N 76 CYS N CA sing N N 77 CYS N H sing N N 78 CYS N H2 sing N N 79 CYS CA C sing N N 80 CYS CA CB sing N N 81 CYS CA HA sing N N 82 CYS C O doub N N 83 CYS C OXT sing N N 84 CYS CB SG sing N N 85 CYS CB HB2 sing N N 86 CYS CB HB3 sing N N 87 CYS SG HG sing N N 88 CYS OXT HXT sing N N 89 GLN N CA sing N N 90 GLN N H sing N N 91 GLN N H2 sing N N 92 GLN CA C sing N N 93 GLN CA CB sing N N 94 GLN CA HA sing N N 95 GLN C O doub N N 96 GLN C OXT sing N N 97 GLN CB CG sing N N 98 GLN CB HB2 sing N N 99 GLN CB HB3 sing N N 100 GLN CG CD sing N N 101 GLN CG HG2 sing N N 102 GLN CG HG3 sing N N 103 GLN CD OE1 doub N N 104 GLN CD NE2 sing N N 105 GLN NE2 HE21 sing N N 106 GLN NE2 HE22 sing N N 107 GLN OXT HXT sing N N 108 GLU N CA sing N N 109 GLU N H sing N N 110 GLU N H2 sing N N 111 GLU CA C sing N N 112 GLU CA CB sing N N 113 GLU CA HA sing N N 114 GLU C O doub N N 115 GLU C OXT sing N N 116 GLU CB CG sing N N 117 GLU CB HB2 sing N N 118 GLU CB HB3 sing N N 119 GLU CG CD sing N N 120 GLU CG HG2 sing N N 121 GLU CG HG3 sing N N 122 GLU CD OE1 doub N N 123 GLU CD OE2 sing N N 124 GLU OE2 HE2 sing N N 125 GLU OXT HXT sing N N 126 GLY N CA sing N N 127 GLY N H sing N N 128 GLY N H2 sing N N 129 GLY CA C sing N N 130 GLY CA HA2 sing N N 131 GLY CA HA3 sing N N 132 GLY C O doub N N 133 GLY C OXT sing N N 134 GLY OXT HXT sing N N 135 HIS N CA sing N N 136 HIS N H sing N N 137 HIS N H2 sing N N 138 HIS CA C sing N N 139 HIS CA CB sing N N 140 HIS CA HA sing N N 141 HIS C O doub N N 142 HIS C OXT sing N N 143 HIS CB CG sing N N 144 HIS CB HB2 sing N N 145 HIS CB HB3 sing N N 146 HIS CG ND1 sing Y N 147 HIS CG CD2 doub Y N 148 HIS ND1 CE1 doub Y N 149 HIS ND1 HD1 sing N N 150 HIS CD2 NE2 sing Y N 151 HIS CD2 HD2 sing N N 152 HIS CE1 NE2 sing Y N 153 HIS CE1 HE1 sing N N 154 HIS NE2 HE2 sing N N 155 HIS OXT HXT sing N N 156 HOH O H1 sing N N 157 HOH O H2 sing N N 158 ILE N CA sing N N 159 ILE N H sing N N 160 ILE N H2 sing N N 161 ILE CA C sing N N 162 ILE CA CB sing N N 163 ILE CA HA sing N N 164 ILE C O doub N N 165 ILE C OXT sing N N 166 ILE CB CG1 sing N N 167 ILE CB CG2 sing N N 168 ILE CB HB sing N N 169 ILE CG1 CD1 sing N N 170 ILE CG1 HG12 sing N N 171 ILE CG1 HG13 sing N N 172 ILE CG2 HG21 sing N N 173 ILE CG2 HG22 sing N N 174 ILE CG2 HG23 sing N N 175 ILE CD1 HD11 sing N N 176 ILE CD1 HD12 sing N N 177 ILE CD1 HD13 sing N N 178 ILE OXT HXT sing N N 179 LEU N CA sing N N 180 LEU N H sing N N 181 LEU N H2 sing N N 182 LEU CA C sing N N 183 LEU CA CB sing N N 184 LEU CA HA sing N N 185 LEU C O doub N N 186 LEU C OXT sing N N 187 LEU CB CG sing N N 188 LEU CB HB2 sing N N 189 LEU CB HB3 sing N N 190 LEU CG CD1 sing N N 191 LEU CG CD2 sing N N 192 LEU CG HG sing N N 193 LEU CD1 HD11 sing N N 194 LEU CD1 HD12 sing N N 195 LEU CD1 HD13 sing N N 196 LEU CD2 HD21 sing N N 197 LEU CD2 HD22 sing N N 198 LEU CD2 HD23 sing N N 199 LEU OXT HXT sing N N 200 LYS N CA sing N N 201 LYS N H sing N N 202 LYS N H2 sing N N 203 LYS CA C sing N N 204 LYS CA CB sing N N 205 LYS CA HA sing N N 206 LYS C O doub N N 207 LYS C OXT sing N N 208 LYS CB CG sing N N 209 LYS CB HB2 sing N N 210 LYS CB HB3 sing N N 211 LYS CG CD sing N N 212 LYS CG HG2 sing N N 213 LYS CG HG3 sing N N 214 LYS CD CE sing N N 215 LYS CD HD2 sing N N 216 LYS CD HD3 sing N N 217 LYS CE NZ sing N N 218 LYS CE HE2 sing N N 219 LYS CE HE3 sing N N 220 LYS NZ HZ1 sing N N 221 LYS NZ HZ2 sing N N 222 LYS NZ HZ3 sing N N 223 LYS OXT HXT sing N N 224 PHE N CA sing N N 225 PHE N H sing N N 226 PHE N H2 sing N N 227 PHE CA C sing N N 228 PHE CA CB sing N N 229 PHE CA HA sing N N 230 PHE C O doub N N 231 PHE C OXT sing N N 232 PHE CB CG sing N N 233 PHE CB HB2 sing N N 234 PHE CB HB3 sing N N 235 PHE CG CD1 doub Y N 236 PHE CG CD2 sing Y N 237 PHE CD1 CE1 sing Y N 238 PHE CD1 HD1 sing N N 239 PHE CD2 CE2 doub Y N 240 PHE CD2 HD2 sing N N 241 PHE CE1 CZ doub Y N 242 PHE CE1 HE1 sing N N 243 PHE CE2 CZ sing Y N 244 PHE CE2 HE2 sing N N 245 PHE CZ HZ sing N N 246 PHE OXT HXT sing N N 247 PRO N CA sing N N 248 PRO N CD sing N N 249 PRO N H sing N N 250 PRO CA C sing N N 251 PRO CA CB sing N N 252 PRO CA HA sing N N 253 PRO C O doub N N 254 PRO C OXT sing N N 255 PRO CB CG sing N N 256 PRO CB HB2 sing N N 257 PRO CB HB3 sing N N 258 PRO CG CD sing N N 259 PRO CG HG2 sing N N 260 PRO CG HG3 sing N N 261 PRO CD HD2 sing N N 262 PRO CD HD3 sing N N 263 PRO OXT HXT sing N N 264 SER N CA sing N N 265 SER N H sing N N 266 SER N H2 sing N N 267 SER CA C sing N N 268 SER CA CB sing N N 269 SER CA HA sing N N 270 SER C O doub N N 271 SER C OXT sing N N 272 SER CB OG sing N N 273 SER CB HB2 sing N N 274 SER CB HB3 sing N N 275 SER OG HG sing N N 276 SER OXT HXT sing N N 277 THR N CA sing N N 278 THR N H sing N N 279 THR N H2 sing N N 280 THR CA C sing N N 281 THR CA CB sing N N 282 THR CA HA sing N N 283 THR C O doub N N 284 THR C OXT sing N N 285 THR CB OG1 sing N N 286 THR CB CG2 sing N N 287 THR CB HB sing N N 288 THR OG1 HG1 sing N N 289 THR CG2 HG21 sing N N 290 THR CG2 HG22 sing N N 291 THR CG2 HG23 sing N N 292 THR OXT HXT sing N N 293 TRP N CA sing N N 294 TRP N H sing N N 295 TRP N H2 sing N N 296 TRP CA C sing N N 297 TRP CA CB sing N N 298 TRP CA HA sing N N 299 TRP C O doub N N 300 TRP C OXT sing N N 301 TRP CB CG sing N N 302 TRP CB HB2 sing N N 303 TRP CB HB3 sing N N 304 TRP CG CD1 doub Y N 305 TRP CG CD2 sing Y N 306 TRP CD1 NE1 sing Y N 307 TRP CD1 HD1 sing N N 308 TRP CD2 CE2 doub Y N 309 TRP CD2 CE3 sing Y N 310 TRP NE1 CE2 sing Y N 311 TRP NE1 HE1 sing N N 312 TRP CE2 CZ2 sing Y N 313 TRP CE3 CZ3 doub Y N 314 TRP CE3 HE3 sing N N 315 TRP CZ2 CH2 doub Y N 316 TRP CZ2 HZ2 sing N N 317 TRP CZ3 CH2 sing Y N 318 TRP CZ3 HZ3 sing N N 319 TRP CH2 HH2 sing N N 320 TRP OXT HXT sing N N 321 TYR N CA sing N N 322 TYR N H sing N N 323 TYR N H2 sing N N 324 TYR CA C sing N N 325 TYR CA CB sing N N 326 TYR CA HA sing N N 327 TYR C O doub N N 328 TYR C OXT sing N N 329 TYR CB CG sing N N 330 TYR CB HB2 sing N N 331 TYR CB HB3 sing N N 332 TYR CG CD1 doub Y N 333 TYR CG CD2 sing Y N 334 TYR CD1 CE1 sing Y N 335 TYR CD1 HD1 sing N N 336 TYR CD2 CE2 doub Y N 337 TYR CD2 HD2 sing N N 338 TYR CE1 CZ doub Y N 339 TYR CE1 HE1 sing N N 340 TYR CE2 CZ sing Y N 341 TYR CE2 HE2 sing N N 342 TYR CZ OH sing N N 343 TYR OH HH sing N N 344 TYR OXT HXT sing N N 345 VAL N CA sing N N 346 VAL N H sing N N 347 VAL N H2 sing N N 348 VAL CA C sing N N 349 VAL CA CB sing N N 350 VAL CA HA sing N N 351 VAL C O doub N N 352 VAL C OXT sing N N 353 VAL CB CG1 sing N N 354 VAL CB CG2 sing N N 355 VAL CB HB sing N N 356 VAL CG1 HG11 sing N N 357 VAL CG1 HG12 sing N N 358 VAL CG1 HG13 sing N N 359 VAL CG2 HG21 sing N N 360 VAL CG2 HG22 sing N N 361 VAL CG2 HG23 sing N N 362 VAL OXT HXT sing N N 363 # _atom_sites.entry_id 1DDK _atom_sites.fract_transf_matrix[1][1] 0.019881 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.001355 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009452 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008925 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S ZN # loop_