data_1DEO # _entry.id 1DEO # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.329 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1DEO RCSB RCSB010019 WWPDB D_1000010019 # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1DEX _pdbx_database_related.details 'Rhamnogalacturonan acetylesterase from Aspergillus aculeatus without SO4 in the active site' _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1DEO _pdbx_database_status.recvd_initial_deposition_date 1999-11-15 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Molgaard, A.' 1 'Kauppinen, S.' 2 'Larsen, S.' 3 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Rhamnogalacturonan acetylesterase elucidates the structure and function of a new family of hydrolases.' 'Structure Fold.Des.' 8 373 383 2000 FODEFH UK 0969-2126 1263 ? 10801485 '10.1016/S0969-2126(00)00118-0' 1 'Molecular cloning and characterization of a rhamnogalacturonan acetylesterase from Aspergillus aculeatus' J.Biol.Chem. 270 27172 27178 1995 JBCHA3 US 0021-9258 0071 ? ? 10.1074/jbc.270.45.27172 2 ;Crystallization and preliminary x-ray diffraction studies of the heterogeneously glycosylated enzyme rhamnogalacturonan acetylesterase from Aspergillus aculeatus ; 'Acta Crystallogr.,Sect.D' 54 1026 1029 1998 ABCRE6 DK 0907-4449 0766 ? ? 10.1107/S0907444998004132 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Molgaard, A.' 1 ? primary 'Kauppinen, S.' 2 ? primary 'Larsen, S.' 3 ? 1 'Kauppinen, S.' 4 ? 1 'Christgau, S.' 5 ? 1 'Kofod, L.V.' 6 ? 1 'Halkier, T.' 7 ? 1 'Dorreich, K.' 8 ? 1 'Dalboge, H.' 9 ? 2 'Molgaard, A.' 10 ? 2 'Petersen, J.' 11 ? 2 'Kauppinen, S.' 12 ? 2 'Dalboge, H.' 13 ? 2 'Johnsen, A.' 14 ? 2 'Navarro Poulsen, J.-C.' 15 ? 2 'Larsen, S.' 16 ? # _cell.entry_id 1DEO _cell.length_a 52.14 _cell.length_b 56.87 _cell.length_c 71.89 _cell.angle_alpha 90.0 _cell.angle_beta 90.0 _cell.angle_gamma 90.0 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1DEO _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'RHAMNOGALACTURONAN ACETYLESTERASE' 24622.881 1 ? ? ? ? 2 branched man ;alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose ; 1072.964 1 ? ? ? ? 3 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 1 ? ? ? ? 4 non-polymer syn 'SULFATE ION' 96.063 2 ? ? ? ? 5 water nat water 18.015 153 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;TTVYLAGDSTMAKNGGGSGTNGWGEYLASYLSATVVNDAVAGRSARSYTREGRFENIADVVTAGDYVIVEFGHNDGGSLS TDNGRTDCSGTGAEVCYSVYDGVNETILTFPAYLENAAKLFTAKGAKVILSSQTPNNPWETGTFVNSPTRFVEYAELAAE VAGVEYVDHWSYVDSIYETLGNATVNSYFPIDHTHTSPAGAEVVAEAFLKAVVCTGTSLKSVLTTTSFEGTCL ; _entity_poly.pdbx_seq_one_letter_code_can ;TTVYLAGDSTMAKNGGGSGTNGWGEYLASYLSATVVNDAVAGRSARSYTREGRFENIADVVTAGDYVIVEFGHNDGGSLS TDNGRTDCSGTGAEVCYSVYDGVNETILTFPAYLENAAKLFTAKGAKVILSSQTPNNPWETGTFVNSPTRFVEYAELAAE VAGVEYVDHWSYVDSIYETLGNATVNSYFPIDHTHTSPAGAEVVAEAFLKAVVCTGTSLKSVLTTTSFEGTCL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 THR n 1 2 THR n 1 3 VAL n 1 4 TYR n 1 5 LEU n 1 6 ALA n 1 7 GLY n 1 8 ASP n 1 9 SER n 1 10 THR n 1 11 MET n 1 12 ALA n 1 13 LYS n 1 14 ASN n 1 15 GLY n 1 16 GLY n 1 17 GLY n 1 18 SER n 1 19 GLY n 1 20 THR n 1 21 ASN n 1 22 GLY n 1 23 TRP n 1 24 GLY n 1 25 GLU n 1 26 TYR n 1 27 LEU n 1 28 ALA n 1 29 SER n 1 30 TYR n 1 31 LEU n 1 32 SER n 1 33 ALA n 1 34 THR n 1 35 VAL n 1 36 VAL n 1 37 ASN n 1 38 ASP n 1 39 ALA n 1 40 VAL n 1 41 ALA n 1 42 GLY n 1 43 ARG n 1 44 SER n 1 45 ALA n 1 46 ARG n 1 47 SER n 1 48 TYR n 1 49 THR n 1 50 ARG n 1 51 GLU n 1 52 GLY n 1 53 ARG n 1 54 PHE n 1 55 GLU n 1 56 ASN n 1 57 ILE n 1 58 ALA n 1 59 ASP n 1 60 VAL n 1 61 VAL n 1 62 THR n 1 63 ALA n 1 64 GLY n 1 65 ASP n 1 66 TYR n 1 67 VAL n 1 68 ILE n 1 69 VAL n 1 70 GLU n 1 71 PHE n 1 72 GLY n 1 73 HIS n 1 74 ASN n 1 75 ASP n 1 76 GLY n 1 77 GLY n 1 78 SER n 1 79 LEU n 1 80 SER n 1 81 THR n 1 82 ASP n 1 83 ASN n 1 84 GLY n 1 85 ARG n 1 86 THR n 1 87 ASP n 1 88 CYS n 1 89 SER n 1 90 GLY n 1 91 THR n 1 92 GLY n 1 93 ALA n 1 94 GLU n 1 95 VAL n 1 96 CYS n 1 97 TYR n 1 98 SER n 1 99 VAL n 1 100 TYR n 1 101 ASP n 1 102 GLY n 1 103 VAL n 1 104 ASN n 1 105 GLU n 1 106 THR n 1 107 ILE n 1 108 LEU n 1 109 THR n 1 110 PHE n 1 111 PRO n 1 112 ALA n 1 113 TYR n 1 114 LEU n 1 115 GLU n 1 116 ASN n 1 117 ALA n 1 118 ALA n 1 119 LYS n 1 120 LEU n 1 121 PHE n 1 122 THR n 1 123 ALA n 1 124 LYS n 1 125 GLY n 1 126 ALA n 1 127 LYS n 1 128 VAL n 1 129 ILE n 1 130 LEU n 1 131 SER n 1 132 SER n 1 133 GLN n 1 134 THR n 1 135 PRO n 1 136 ASN n 1 137 ASN n 1 138 PRO n 1 139 TRP n 1 140 GLU n 1 141 THR n 1 142 GLY n 1 143 THR n 1 144 PHE n 1 145 VAL n 1 146 ASN n 1 147 SER n 1 148 PRO n 1 149 THR n 1 150 ARG n 1 151 PHE n 1 152 VAL n 1 153 GLU n 1 154 TYR n 1 155 ALA n 1 156 GLU n 1 157 LEU n 1 158 ALA n 1 159 ALA n 1 160 GLU n 1 161 VAL n 1 162 ALA n 1 163 GLY n 1 164 VAL n 1 165 GLU n 1 166 TYR n 1 167 VAL n 1 168 ASP n 1 169 HIS n 1 170 TRP n 1 171 SER n 1 172 TYR n 1 173 VAL n 1 174 ASP n 1 175 SER n 1 176 ILE n 1 177 TYR n 1 178 GLU n 1 179 THR n 1 180 LEU n 1 181 GLY n 1 182 ASN n 1 183 ALA n 1 184 THR n 1 185 VAL n 1 186 ASN n 1 187 SER n 1 188 TYR n 1 189 PHE n 1 190 PRO n 1 191 ILE n 1 192 ASP n 1 193 HIS n 1 194 THR n 1 195 HIS n 1 196 THR n 1 197 SER n 1 198 PRO n 1 199 ALA n 1 200 GLY n 1 201 ALA n 1 202 GLU n 1 203 VAL n 1 204 VAL n 1 205 ALA n 1 206 GLU n 1 207 ALA n 1 208 PHE n 1 209 LEU n 1 210 LYS n 1 211 ALA n 1 212 VAL n 1 213 VAL n 1 214 CYS n 1 215 THR n 1 216 GLY n 1 217 THR n 1 218 SER n 1 219 LEU n 1 220 LYS n 1 221 SER n 1 222 VAL n 1 223 LEU n 1 224 THR n 1 225 THR n 1 226 THR n 1 227 SER n 1 228 PHE n 1 229 GLU n 1 230 GLY n 1 231 THR n 1 232 CYS n 1 233 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Aspergillus _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'KSM 510' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Aspergillus aculeatus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 5053 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Aspergillus oryzae' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 5062 _entity_src_gen.host_org_genus Aspergillus _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain A1560 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PHD464 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name EMBL _struct_ref.db_code Q00017 _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession Q00017 _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1DEO _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 233 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q00017 _struct_ref_seq.db_align_beg 18 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 250 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 233 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BMA 'D-saccharide, beta linking' . beta-D-mannopyranose ? 'C6 H12 O6' 180.156 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MAN 'D-saccharide, alpha linking' . alpha-D-mannopyranose ? 'C6 H12 O6' 180.156 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ? 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1DEO _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.16 _exptl_crystal.density_percent_sol 43.16 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.0 _exptl_crystal_grow.pdbx_details 'Lithium sulfate, Na acetate, pH 5.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 291.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS II' _diffrn_detector.pdbx_collection_date 1995-04-25 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type RIGAKU _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1DEO _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 30 _reflns.d_resolution_high 1.55 _reflns.number_obs 28693 _reflns.number_all 28693 _reflns.percent_possible_obs 91.0 _reflns.pdbx_Rmerge_I_obs 0.035 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 13.7 _reflns.B_iso_Wilson_estimate 17.7 _reflns.pdbx_redundancy 7.7 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.55 _reflns_shell.d_res_low 1.63 _reflns_shell.percent_possible_all 77.9 _reflns_shell.Rmerge_I_obs 0.293 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy 2.8 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 3517 _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 1DEO _refine.ls_number_reflns_obs 28316 _refine.ls_number_reflns_all 28647 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_d_res_low 30.0 _refine.ls_d_res_high 1.55 _refine.ls_percent_reflns_obs 98.7 _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.164 _refine.ls_R_factor_R_free 0.2 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free 2818 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'Engh and Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details '10% chosen randomly' _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1735 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 96 _refine_hist.number_atoms_solvent 153 _refine_hist.number_atoms_total 1984 _refine_hist.d_res_high 1.55 _refine_hist.d_res_low 30.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.014 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 1.60 ? ? ? 'X-RAY DIFFRACTION' ? # _struct.entry_id 1DEO _struct.title 'RHAMNOGALACTURONAN ACETYLESTERASE FROM ASPERGILLUS ACULEATUS AT 1.55 A RESOLUTION WITH SO4 IN THE ACTIVE SITE' _struct.pdbx_descriptor 'RHAMNOGALACTURONAN ACETYLESTERASE' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1DEO _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'SGNH HYDROLASE, HYDROLASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 5 ? # _struct_biol.id 1 _struct_biol.details 'The biological assembly is a monomer.' _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 22 ? LEU A 27 ? GLY A 22 LEU A 27 5 ? 6 HELX_P HELX_P2 2 LEU A 27 ? TYR A 30 ? LEU A 27 TYR A 30 5 ? 4 HELX_P HELX_P3 3 SER A 44 ? GLU A 51 ? SER A 44 GLU A 51 1 ? 8 HELX_P HELX_P4 4 GLY A 52 ? VAL A 61 ? GLY A 52 VAL A 61 1 ? 10 HELX_P HELX_P5 5 SER A 78 ? ASP A 82 ? SER A 78 ASP A 82 5 ? 5 HELX_P HELX_P6 6 THR A 109 ? LYS A 124 ? THR A 109 LYS A 124 1 ? 16 HELX_P HELX_P7 7 THR A 149 ? GLY A 163 ? THR A 149 GLY A 163 1 ? 15 HELX_P HELX_P8 8 ASP A 168 ? GLY A 181 ? ASP A 168 GLY A 181 1 ? 14 HELX_P HELX_P9 9 GLY A 181 ? TYR A 188 ? GLY A 181 TYR A 188 1 ? 8 HELX_P HELX_P10 10 SER A 197 ? GLY A 216 ? SER A 197 GLY A 216 1 ? 20 HELX_P HELX_P11 11 THR A 217 ? VAL A 222 ? THR A 217 VAL A 222 5 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 88 SG ? ? ? 1_555 A CYS 96 SG ? ? A CYS 88 A CYS 96 1_555 ? ? ? ? ? ? ? 2.031 ? ? disulf2 disulf ? ? A CYS 214 SG ? ? ? 1_555 A CYS 232 SG ? ? A CYS 214 A CYS 232 1_555 ? ? ? ? ? ? ? 2.045 ? ? covale1 covale one ? A ASN 104 ND2 ? ? ? 1_555 C NAG . C1 ? ? A ASN 104 A NAG 1002 1_555 ? ? ? ? ? ? ? 1.463 ? N-Glycosylation covale2 covale one ? A ASN 182 ND2 ? ? ? 1_555 B NAG . C1 ? ? A ASN 182 B NAG 1 1_555 ? ? ? ? ? ? ? 1.442 ? N-Glycosylation covale3 covale both ? B NAG . O4 ? ? ? 1_555 B NAG . C1 ? ? B NAG 1 B NAG 2 1_555 ? ? ? ? ? ? ? 1.387 ? ? covale4 covale both ? B NAG . O4 ? ? ? 1_555 B BMA . C1 ? ? B NAG 2 B BMA 3 1_555 ? ? ? ? ? ? ? 1.387 ? ? covale5 covale both ? B BMA . O6 ? ? ? 1_555 B BMA . C1 ? ? B BMA 3 B BMA 4 1_555 ? ? ? ? ? ? ? 1.371 ? ? covale6 covale both ? B BMA . O3 ? ? ? 1_555 B MAN . C1 ? ? B BMA 4 B MAN 5 1_555 ? ? ? ? ? ? ? 1.390 ? ? covale7 covale both ? B BMA . O6 ? ? ? 1_555 B MAN . C1 ? ? B BMA 4 B MAN 6 1_555 ? ? ? ? ? ? ? 1.397 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 34 ? ASN A 37 ? THR A 34 ASN A 37 A 2 THR A 2 ? ALA A 6 ? THR A 2 ALA A 6 A 3 TYR A 66 ? VAL A 69 ? TYR A 66 VAL A 69 A 4 LYS A 127 ? SER A 131 ? LYS A 127 SER A 131 A 5 GLU A 165 ? VAL A 167 ? GLU A 165 VAL A 167 B 1 CYS A 96 ? TYR A 100 ? CYS A 96 TYR A 100 B 2 VAL A 103 ? ILE A 107 ? VAL A 103 ILE A 107 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 36 ? N VAL A 36 O VAL A 3 ? O VAL A 3 A 2 3 N TYR A 4 ? N TYR A 4 O TYR A 66 ? O TYR A 66 A 3 4 N VAL A 67 ? N VAL A 67 O LYS A 127 ? O LYS A 127 A 4 5 N LEU A 130 ? N LEU A 130 O GLU A 165 ? O GLU A 165 B 1 2 N TYR A 100 ? N TYR A 100 O VAL A 103 ? O VAL A 103 # _database_PDB_matrix.entry_id 1DEO _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1DEO _atom_sites.fract_transf_matrix[1][1] 0.019179 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017584 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013910 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 THR 1 1 1 THR THR A . n A 1 2 THR 2 2 2 THR THR A . n A 1 3 VAL 3 3 3 VAL VAL A . n A 1 4 TYR 4 4 4 TYR TYR A . n A 1 5 LEU 5 5 5 LEU LEU A . n A 1 6 ALA 6 6 6 ALA ALA A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 ASP 8 8 8 ASP ASP A . n A 1 9 SER 9 9 9 SER SER A . n A 1 10 THR 10 10 10 THR THR A . n A 1 11 MET 11 11 11 MET MET A . n A 1 12 ALA 12 12 12 ALA ALA A . n A 1 13 LYS 13 13 13 LYS LYS A . n A 1 14 ASN 14 14 14 ASN ASN A . n A 1 15 GLY 15 15 15 GLY GLY A . n A 1 16 GLY 16 16 16 GLY GLY A . n A 1 17 GLY 17 17 17 GLY GLY A . n A 1 18 SER 18 18 18 SER SER A . n A 1 19 GLY 19 19 19 GLY GLY A . n A 1 20 THR 20 20 20 THR THR A . n A 1 21 ASN 21 21 21 ASN ASN A . n A 1 22 GLY 22 22 22 GLY GLY A . n A 1 23 TRP 23 23 23 TRP TRP A . n A 1 24 GLY 24 24 24 GLY GLY A . n A 1 25 GLU 25 25 25 GLU GLU A . n A 1 26 TYR 26 26 26 TYR TYR A . n A 1 27 LEU 27 27 27 LEU LEU A . n A 1 28 ALA 28 28 28 ALA ALA A . n A 1 29 SER 29 29 29 SER SER A . n A 1 30 TYR 30 30 30 TYR TYR A . n A 1 31 LEU 31 31 31 LEU LEU A . n A 1 32 SER 32 32 32 SER SER A . n A 1 33 ALA 33 33 33 ALA ALA A . n A 1 34 THR 34 34 34 THR THR A . n A 1 35 VAL 35 35 35 VAL VAL A . n A 1 36 VAL 36 36 36 VAL VAL A . n A 1 37 ASN 37 37 37 ASN ASN A . n A 1 38 ASP 38 38 38 ASP ASP A . n A 1 39 ALA 39 39 39 ALA ALA A . n A 1 40 VAL 40 40 40 VAL VAL A . n A 1 41 ALA 41 41 41 ALA ALA A . n A 1 42 GLY 42 42 42 GLY GLY A . n A 1 43 ARG 43 43 43 ARG ARG A . n A 1 44 SER 44 44 44 SER SER A . n A 1 45 ALA 45 45 45 ALA ALA A . n A 1 46 ARG 46 46 46 ARG ARG A . n A 1 47 SER 47 47 47 SER SER A . n A 1 48 TYR 48 48 48 TYR TYR A . n A 1 49 THR 49 49 49 THR THR A . n A 1 50 ARG 50 50 50 ARG ARG A . n A 1 51 GLU 51 51 51 GLU GLU A . n A 1 52 GLY 52 52 52 GLY GLY A . n A 1 53 ARG 53 53 53 ARG ARG A . n A 1 54 PHE 54 54 54 PHE PHE A . n A 1 55 GLU 55 55 55 GLU GLU A . n A 1 56 ASN 56 56 56 ASN ASN A . n A 1 57 ILE 57 57 57 ILE ILE A . n A 1 58 ALA 58 58 58 ALA ALA A . n A 1 59 ASP 59 59 59 ASP ASP A . n A 1 60 VAL 60 60 60 VAL VAL A . n A 1 61 VAL 61 61 61 VAL VAL A . n A 1 62 THR 62 62 62 THR THR A . n A 1 63 ALA 63 63 63 ALA ALA A . n A 1 64 GLY 64 64 64 GLY GLY A . n A 1 65 ASP 65 65 65 ASP ASP A . n A 1 66 TYR 66 66 66 TYR TYR A . n A 1 67 VAL 67 67 67 VAL VAL A . n A 1 68 ILE 68 68 68 ILE ILE A . n A 1 69 VAL 69 69 69 VAL VAL A . n A 1 70 GLU 70 70 70 GLU GLU A . n A 1 71 PHE 71 71 71 PHE PHE A . n A 1 72 GLY 72 72 72 GLY GLY A . n A 1 73 HIS 73 73 73 HIS HIS A . n A 1 74 ASN 74 74 74 ASN ASN A . n A 1 75 ASP 75 75 75 ASP ASP A . n A 1 76 GLY 76 76 76 GLY GLY A . n A 1 77 GLY 77 77 77 GLY GLY A . n A 1 78 SER 78 78 78 SER SER A . n A 1 79 LEU 79 79 79 LEU LEU A . n A 1 80 SER 80 80 80 SER SER A . n A 1 81 THR 81 81 81 THR THR A . n A 1 82 ASP 82 82 82 ASP ASP A . n A 1 83 ASN 83 83 83 ASN ASN A . n A 1 84 GLY 84 84 84 GLY GLY A . n A 1 85 ARG 85 85 85 ARG ARG A . n A 1 86 THR 86 86 86 THR THR A . n A 1 87 ASP 87 87 87 ASP ASP A . n A 1 88 CYS 88 88 88 CYS CYS A . n A 1 89 SER 89 89 89 SER SER A . n A 1 90 GLY 90 90 90 GLY GLY A . n A 1 91 THR 91 91 91 THR THR A . n A 1 92 GLY 92 92 92 GLY GLY A . n A 1 93 ALA 93 93 93 ALA ALA A . n A 1 94 GLU 94 94 94 GLU GLU A . n A 1 95 VAL 95 95 95 VAL VAL A . n A 1 96 CYS 96 96 96 CYS CYS A . n A 1 97 TYR 97 97 97 TYR TYR A . n A 1 98 SER 98 98 98 SER SER A . n A 1 99 VAL 99 99 99 VAL VAL A . n A 1 100 TYR 100 100 100 TYR TYR A . n A 1 101 ASP 101 101 101 ASP ASP A . n A 1 102 GLY 102 102 102 GLY GLY A . n A 1 103 VAL 103 103 103 VAL VAL A . n A 1 104 ASN 104 104 104 ASN ASN A . n A 1 105 GLU 105 105 105 GLU GLU A . n A 1 106 THR 106 106 106 THR THR A . n A 1 107 ILE 107 107 107 ILE ILE A . n A 1 108 LEU 108 108 108 LEU LEU A . n A 1 109 THR 109 109 109 THR THR A . n A 1 110 PHE 110 110 110 PHE PHE A . n A 1 111 PRO 111 111 111 PRO PRO A . n A 1 112 ALA 112 112 112 ALA ALA A . n A 1 113 TYR 113 113 113 TYR TYR A . n A 1 114 LEU 114 114 114 LEU LEU A . n A 1 115 GLU 115 115 115 GLU GLU A . n A 1 116 ASN 116 116 116 ASN ASN A . n A 1 117 ALA 117 117 117 ALA ALA A . n A 1 118 ALA 118 118 118 ALA ALA A . n A 1 119 LYS 119 119 119 LYS LYS A . n A 1 120 LEU 120 120 120 LEU LEU A . n A 1 121 PHE 121 121 121 PHE PHE A . n A 1 122 THR 122 122 122 THR THR A . n A 1 123 ALA 123 123 123 ALA ALA A . n A 1 124 LYS 124 124 124 LYS LYS A . n A 1 125 GLY 125 125 125 GLY GLY A . n A 1 126 ALA 126 126 126 ALA ALA A . n A 1 127 LYS 127 127 127 LYS LYS A . n A 1 128 VAL 128 128 128 VAL VAL A . n A 1 129 ILE 129 129 129 ILE ILE A . n A 1 130 LEU 130 130 130 LEU LEU A . n A 1 131 SER 131 131 131 SER SER A . n A 1 132 SER 132 132 132 SER SER A . n A 1 133 GLN 133 133 133 GLN GLN A . n A 1 134 THR 134 134 134 THR THR A . n A 1 135 PRO 135 135 135 PRO PRO A . n A 1 136 ASN 136 136 136 ASN ASN A . n A 1 137 ASN 137 137 137 ASN ASN A . n A 1 138 PRO 138 138 138 PRO PRO A . n A 1 139 TRP 139 139 139 TRP TRP A . n A 1 140 GLU 140 140 140 GLU GLU A . n A 1 141 THR 141 141 141 THR THR A . n A 1 142 GLY 142 142 142 GLY GLY A . n A 1 143 THR 143 143 143 THR THR A . n A 1 144 PHE 144 144 144 PHE PHE A . n A 1 145 VAL 145 145 145 VAL VAL A . n A 1 146 ASN 146 146 146 ASN ASN A . n A 1 147 SER 147 147 147 SER SER A . n A 1 148 PRO 148 148 148 PRO PRO A . n A 1 149 THR 149 149 149 THR THR A . n A 1 150 ARG 150 150 150 ARG ARG A . n A 1 151 PHE 151 151 151 PHE PHE A . n A 1 152 VAL 152 152 152 VAL VAL A . n A 1 153 GLU 153 153 153 GLU GLU A . n A 1 154 TYR 154 154 154 TYR TYR A . n A 1 155 ALA 155 155 155 ALA ALA A . n A 1 156 GLU 156 156 156 GLU GLU A . n A 1 157 LEU 157 157 157 LEU LEU A . n A 1 158 ALA 158 158 158 ALA ALA A . n A 1 159 ALA 159 159 159 ALA ALA A . n A 1 160 GLU 160 160 160 GLU GLU A . n A 1 161 VAL 161 161 161 VAL VAL A . n A 1 162 ALA 162 162 162 ALA ALA A . n A 1 163 GLY 163 163 163 GLY GLY A . n A 1 164 VAL 164 164 164 VAL VAL A . n A 1 165 GLU 165 165 165 GLU GLU A . n A 1 166 TYR 166 166 166 TYR TYR A . n A 1 167 VAL 167 167 167 VAL VAL A . n A 1 168 ASP 168 168 168 ASP ASP A . n A 1 169 HIS 169 169 169 HIS HIS A . n A 1 170 TRP 170 170 170 TRP TRP A . n A 1 171 SER 171 171 171 SER SER A . n A 1 172 TYR 172 172 172 TYR TYR A . n A 1 173 VAL 173 173 173 VAL VAL A . n A 1 174 ASP 174 174 174 ASP ASP A . n A 1 175 SER 175 175 175 SER SER A . n A 1 176 ILE 176 176 176 ILE ILE A . n A 1 177 TYR 177 177 177 TYR TYR A . n A 1 178 GLU 178 178 178 GLU GLU A . n A 1 179 THR 179 179 179 THR THR A . n A 1 180 LEU 180 180 180 LEU LEU A . n A 1 181 GLY 181 181 181 GLY GLY A . n A 1 182 ASN 182 182 182 ASN ASN A . n A 1 183 ALA 183 183 183 ALA ALA A . n A 1 184 THR 184 184 184 THR THR A . n A 1 185 VAL 185 185 185 VAL VAL A . n A 1 186 ASN 186 186 186 ASN ASN A . n A 1 187 SER 187 187 187 SER SER A . n A 1 188 TYR 188 188 188 TYR TYR A . n A 1 189 PHE 189 189 189 PHE PHE A . n A 1 190 PRO 190 190 190 PRO PRO A . n A 1 191 ILE 191 191 191 ILE ILE A . n A 1 192 ASP 192 192 192 ASP ASP A . n A 1 193 HIS 193 193 193 HIS HIS A . n A 1 194 THR 194 194 194 THR THR A . n A 1 195 HIS 195 195 195 HIS HIS A . n A 1 196 THR 196 196 196 THR THR A . n A 1 197 SER 197 197 197 SER SER A . n A 1 198 PRO 198 198 198 PRO PRO A . n A 1 199 ALA 199 199 199 ALA ALA A . n A 1 200 GLY 200 200 200 GLY GLY A . n A 1 201 ALA 201 201 201 ALA ALA A . n A 1 202 GLU 202 202 202 GLU GLU A . n A 1 203 VAL 203 203 203 VAL VAL A . n A 1 204 VAL 204 204 204 VAL VAL A . n A 1 205 ALA 205 205 205 ALA ALA A . n A 1 206 GLU 206 206 206 GLU GLU A . n A 1 207 ALA 207 207 207 ALA ALA A . n A 1 208 PHE 208 208 208 PHE PHE A . n A 1 209 LEU 209 209 209 LEU LEU A . n A 1 210 LYS 210 210 210 LYS LYS A . n A 1 211 ALA 211 211 211 ALA ALA A . n A 1 212 VAL 212 212 212 VAL VAL A . n A 1 213 VAL 213 213 213 VAL VAL A . n A 1 214 CYS 214 214 214 CYS CYS A . n A 1 215 THR 215 215 215 THR THR A . n A 1 216 GLY 216 216 216 GLY GLY A . n A 1 217 THR 217 217 217 THR THR A . n A 1 218 SER 218 218 218 SER SER A . n A 1 219 LEU 219 219 219 LEU LEU A . n A 1 220 LYS 220 220 220 LYS LYS A . n A 1 221 SER 221 221 221 SER SER A . n A 1 222 VAL 222 222 222 VAL VAL A . n A 1 223 LEU 223 223 223 LEU LEU A . n A 1 224 THR 224 224 224 THR THR A . n A 1 225 THR 225 225 225 THR THR A . n A 1 226 THR 226 226 226 THR THR A . n A 1 227 SER 227 227 227 SER SER A . n A 1 228 PHE 228 228 228 PHE PHE A . n A 1 229 GLU 229 229 229 GLU GLU A . n A 1 230 GLY 230 230 230 GLY GLY A . n A 1 231 THR 231 231 231 THR THR A . n A 1 232 CYS 232 232 232 CYS CYS A . n A 1 233 LEU 233 233 233 LEU LEU A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 NAG 1 1002 1002 NAG NAG A . D 4 SO4 1 2001 2001 SO4 SO4 A . E 4 SO4 1 2002 2002 SO4 SO4 A . F 5 HOH 1 2003 1 HOH HOH A . F 5 HOH 2 2004 2 HOH HOH A . F 5 HOH 3 2005 3 HOH HOH A . F 5 HOH 4 2006 4 HOH HOH A . F 5 HOH 5 2007 5 HOH HOH A . F 5 HOH 6 2008 6 HOH HOH A . F 5 HOH 7 2009 7 HOH HOH A . F 5 HOH 8 2010 8 HOH HOH A . F 5 HOH 9 2011 9 HOH HOH A . F 5 HOH 10 2012 10 HOH HOH A . F 5 HOH 11 2013 11 HOH HOH A . F 5 HOH 12 2014 12 HOH HOH A . F 5 HOH 13 2015 13 HOH HOH A . F 5 HOH 14 2016 14 HOH HOH A . F 5 HOH 15 2017 15 HOH HOH A . F 5 HOH 16 2018 16 HOH HOH A . F 5 HOH 17 2019 17 HOH HOH A . F 5 HOH 18 2020 18 HOH HOH A . F 5 HOH 19 2021 19 HOH HOH A . F 5 HOH 20 2022 20 HOH HOH A . F 5 HOH 21 2023 21 HOH HOH A . F 5 HOH 22 2024 22 HOH HOH A . F 5 HOH 23 2025 23 HOH HOH A . F 5 HOH 24 2026 24 HOH HOH A . F 5 HOH 25 2027 25 HOH HOH A . F 5 HOH 26 2028 26 HOH HOH A . F 5 HOH 27 2029 27 HOH HOH A . F 5 HOH 28 2030 28 HOH HOH A . F 5 HOH 29 2031 29 HOH HOH A . F 5 HOH 30 2032 30 HOH HOH A . F 5 HOH 31 2033 31 HOH HOH A . F 5 HOH 32 2034 32 HOH HOH A . F 5 HOH 33 2035 33 HOH HOH A . F 5 HOH 34 2036 34 HOH HOH A . F 5 HOH 35 2037 35 HOH HOH A . F 5 HOH 36 2038 36 HOH HOH A . F 5 HOH 37 2039 37 HOH HOH A . F 5 HOH 38 2040 38 HOH HOH A . F 5 HOH 39 2041 39 HOH HOH A . F 5 HOH 40 2042 40 HOH HOH A . F 5 HOH 41 2043 41 HOH HOH A . F 5 HOH 42 2044 42 HOH HOH A . F 5 HOH 43 2045 43 HOH HOH A . F 5 HOH 44 2046 44 HOH HOH A . F 5 HOH 45 2047 45 HOH HOH A . F 5 HOH 46 2048 46 HOH HOH A . F 5 HOH 47 2049 47 HOH HOH A . F 5 HOH 48 2050 48 HOH HOH A . F 5 HOH 49 2051 49 HOH HOH A . F 5 HOH 50 2052 50 HOH HOH A . F 5 HOH 51 2053 51 HOH HOH A . F 5 HOH 52 2054 52 HOH HOH A . F 5 HOH 53 2055 53 HOH HOH A . F 5 HOH 54 2056 54 HOH HOH A . F 5 HOH 55 2057 55 HOH HOH A . F 5 HOH 56 2058 56 HOH HOH A . F 5 HOH 57 2059 57 HOH HOH A . F 5 HOH 58 2060 58 HOH HOH A . F 5 HOH 59 2061 59 HOH HOH A . F 5 HOH 60 2062 60 HOH HOH A . F 5 HOH 61 2063 61 HOH HOH A . F 5 HOH 62 2064 62 HOH HOH A . F 5 HOH 63 2065 63 HOH HOH A . F 5 HOH 64 2066 64 HOH HOH A . F 5 HOH 65 2067 65 HOH HOH A . F 5 HOH 66 2068 66 HOH HOH A . F 5 HOH 67 2069 67 HOH HOH A . F 5 HOH 68 2070 68 HOH HOH A . F 5 HOH 69 2071 69 HOH HOH A . F 5 HOH 70 2072 70 HOH HOH A . F 5 HOH 71 2073 71 HOH HOH A . F 5 HOH 72 2074 72 HOH HOH A . F 5 HOH 73 2075 73 HOH HOH A . F 5 HOH 74 2076 74 HOH HOH A . F 5 HOH 75 2077 75 HOH HOH A . F 5 HOH 76 2078 76 HOH HOH A . F 5 HOH 77 2079 77 HOH HOH A . F 5 HOH 78 2080 78 HOH HOH A . F 5 HOH 79 2081 79 HOH HOH A . F 5 HOH 80 2082 80 HOH HOH A . F 5 HOH 81 2083 81 HOH HOH A . F 5 HOH 82 2084 82 HOH HOH A . F 5 HOH 83 2085 83 HOH HOH A . F 5 HOH 84 2086 84 HOH HOH A . F 5 HOH 85 2087 85 HOH HOH A . F 5 HOH 86 2088 86 HOH HOH A . F 5 HOH 87 2089 87 HOH HOH A . F 5 HOH 88 2090 88 HOH HOH A . F 5 HOH 89 2091 89 HOH HOH A . F 5 HOH 90 2092 90 HOH HOH A . F 5 HOH 91 2093 91 HOH HOH A . F 5 HOH 92 2094 92 HOH HOH A . F 5 HOH 93 2095 93 HOH HOH A . F 5 HOH 94 2096 94 HOH HOH A . F 5 HOH 95 2097 95 HOH HOH A . F 5 HOH 96 2098 96 HOH HOH A . F 5 HOH 97 2099 97 HOH HOH A . F 5 HOH 98 2100 98 HOH HOH A . F 5 HOH 99 2101 99 HOH HOH A . F 5 HOH 100 2102 100 HOH HOH A . F 5 HOH 101 2103 101 HOH HOH A . F 5 HOH 102 2104 102 HOH HOH A . F 5 HOH 103 2105 103 HOH HOH A . F 5 HOH 104 2106 104 HOH HOH A . F 5 HOH 105 2107 105 HOH HOH A . F 5 HOH 106 2108 106 HOH HOH A . F 5 HOH 107 2109 107 HOH HOH A . F 5 HOH 108 2110 108 HOH HOH A . F 5 HOH 109 2111 109 HOH HOH A . F 5 HOH 110 2112 110 HOH HOH A . F 5 HOH 111 2113 111 HOH HOH A . F 5 HOH 112 2114 112 HOH HOH A . F 5 HOH 113 2115 113 HOH HOH A . F 5 HOH 114 2116 114 HOH HOH A . F 5 HOH 115 2117 115 HOH HOH A . F 5 HOH 116 2118 116 HOH HOH A . F 5 HOH 117 2119 117 HOH HOH A . F 5 HOH 118 2120 118 HOH HOH A . F 5 HOH 119 2121 119 HOH HOH A . F 5 HOH 120 2122 120 HOH HOH A . F 5 HOH 121 2123 121 HOH HOH A . F 5 HOH 122 2124 122 HOH HOH A . F 5 HOH 123 2125 123 HOH HOH A . F 5 HOH 124 2126 124 HOH HOH A . F 5 HOH 125 2127 125 HOH HOH A . F 5 HOH 126 2128 126 HOH HOH A . F 5 HOH 127 2129 127 HOH HOH A . F 5 HOH 128 2130 128 HOH HOH A . F 5 HOH 129 2131 129 HOH HOH A . F 5 HOH 130 2132 130 HOH HOH A . F 5 HOH 131 2133 131 HOH HOH A . F 5 HOH 132 2134 132 HOH HOH A . F 5 HOH 133 2135 133 HOH HOH A . F 5 HOH 134 2136 134 HOH HOH A . F 5 HOH 135 2137 135 HOH HOH A . F 5 HOH 136 2138 136 HOH HOH A . F 5 HOH 137 2139 137 HOH HOH A . F 5 HOH 138 2140 138 HOH HOH A . F 5 HOH 139 2141 139 HOH HOH A . F 5 HOH 140 2142 140 HOH HOH A . F 5 HOH 141 2143 141 HOH HOH A . F 5 HOH 142 2144 142 HOH HOH A . F 5 HOH 143 2145 143 HOH HOH A . F 5 HOH 144 2146 144 HOH HOH A . F 5 HOH 145 2147 145 HOH HOH A . F 5 HOH 146 2148 146 HOH HOH A . F 5 HOH 147 2149 147 HOH HOH A . F 5 HOH 148 2150 148 HOH HOH A . F 5 HOH 149 2151 149 HOH HOH A . F 5 HOH 150 2152 150 HOH HOH A . F 5 HOH 151 2153 151 HOH HOH A . F 5 HOH 152 2154 152 HOH HOH A . F 5 HOH 153 2155 153 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A ASN 182 A ASN 182 ? ASN 'GLYCOSYLATION SITE' 2 A ASN 104 A ASN 104 ? ASN 'GLYCOSYLATION SITE' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2000-04-26 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-04 5 'Structure model' 2 0 2020-07-29 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 5 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Non-polymer description' 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Refinement description' 5 5 'Structure model' Advisory 6 5 'Structure model' 'Atomic model' 7 5 'Structure model' 'Data collection' 8 5 'Structure model' 'Derived calculations' 9 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' atom_site 3 5 'Structure model' chem_comp 4 5 'Structure model' entity 5 5 'Structure model' pdbx_branch_scheme 6 5 'Structure model' pdbx_chem_comp_identifier 7 5 'Structure model' pdbx_entity_branch 8 5 'Structure model' pdbx_entity_branch_descriptor 9 5 'Structure model' pdbx_entity_branch_link 10 5 'Structure model' pdbx_entity_branch_list 11 5 'Structure model' pdbx_entity_nonpoly 12 5 'Structure model' pdbx_nonpoly_scheme 13 5 'Structure model' pdbx_struct_assembly_gen 14 5 'Structure model' pdbx_validate_close_contact 15 5 'Structure model' struct_asym 16 5 'Structure model' struct_conn 17 5 'Structure model' struct_site 18 5 'Structure model' struct_site_gen # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_atom_site.B_iso_or_equiv' 2 5 'Structure model' '_atom_site.Cartn_x' 3 5 'Structure model' '_atom_site.Cartn_y' 4 5 'Structure model' '_atom_site.Cartn_z' 5 5 'Structure model' '_atom_site.auth_asym_id' 6 5 'Structure model' '_atom_site.auth_seq_id' 7 5 'Structure model' '_atom_site.label_asym_id' 8 5 'Structure model' '_atom_site.label_entity_id' 9 5 'Structure model' '_chem_comp.name' 10 5 'Structure model' '_chem_comp.type' 11 5 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 12 5 'Structure model' '_pdbx_validate_close_contact.auth_asym_id_1' 13 5 'Structure model' '_pdbx_validate_close_contact.auth_asym_id_2' 14 5 'Structure model' '_pdbx_validate_close_contact.auth_seq_id_1' 15 5 'Structure model' '_pdbx_validate_close_contact.auth_seq_id_2' 16 5 'Structure model' '_struct_conn.pdbx_dist_value' 17 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 18 5 'Structure model' '_struct_conn.pdbx_role' 19 5 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 20 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 21 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 22 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 23 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 24 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 25 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 26 5 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 27 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 28 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 29 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 30 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 31 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal ROTAVATA 'data reduction' . ? 1 MLPHARE phasing . ? 2 X-PLOR refinement 3.851 ? 3 CCP4 'data scaling' '(AGROVATA' ? 4 ROTAVATA 'data scaling' . ? 5 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O3 B BMA 4 ? ? H1 B MAN 5 ? ? 0.96 2 1 O6 B BMA 4 ? ? H1 B MAN 6 ? ? 1.01 3 1 H1 A HOH 2011 ? ? H1 A HOH 2015 ? ? 1.19 4 1 H1 A HOH 2091 ? ? H1 A HOH 2097 ? ? 1.27 5 1 H1 A HOH 2041 ? ? H2 A HOH 2095 ? ? 1.29 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 50 ? ? CZ A ARG 50 ? ? NH1 A ARG 50 ? ? 123.82 120.30 3.52 0.50 N 2 1 NE A ARG 50 ? ? CZ A ARG 50 ? ? NH2 A ARG 50 ? ? 115.98 120.30 -4.32 0.50 N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ASP _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 8 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -113.49 _pdbx_validate_torsion.psi -156.43 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero B 2 NAG 1 B NAG 1 A NAG 1001 n B 2 NAG 2 B NAG 2 A NAG 1003 n B 2 BMA 3 B BMA 3 A MAN 1004 n B 2 BMA 4 B BMA 4 A MAN 1005 n B 2 MAN 5 B MAN 5 A MAN 1007 n B 2 MAN 6 B MAN 6 A MAN 1006 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier BMA 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpb BMA 'COMMON NAME' GMML 1.0 b-D-mannopyranose BMA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Manp BMA 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man MAN 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpa MAN 'COMMON NAME' GMML 1.0 a-D-mannopyranose MAN 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Manp MAN 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 'DManpa1-3[DManpa1-6]DManpb1-6DManpb1-4DGlcpNAcb1-4DGlcpNAcb1-' 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/3,6,5/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5]/1-1-2-2-3-3/a4-b1_b4-c1_c6-d1_d3-e1_d6-f1' WURCS PDB2Glycan 1.1.0 3 2 '[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{[(6+1)][b-D-Manp]{[(3+1)][a-D-Manp]{}[(6+1)][a-D-Manp]{}}}}}}' LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 2 2 NAG C1 O1 1 NAG O4 HO4 sing ? 2 2 3 BMA C1 O1 2 NAG O4 HO4 sing ? 3 2 4 BMA C1 O1 3 BMA O6 HO6 sing ? 4 2 5 MAN C1 O1 4 BMA O3 HO3 sing ? 5 2 6 MAN C1 O1 4 BMA O6 HO6 sing ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 NAG 1 n 2 NAG 2 n 2 BMA 3 n 2 BMA 4 n 2 MAN 5 n 2 MAN 6 n # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 4 'SULFATE ION' SO4 5 water HOH #