data_1DKZ # _entry.id 1DKZ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.385 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1DKZ pdb_00001dkz 10.2210/pdb1dkz/pdb WWPDB D_1000172828 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1996-12-07 2 'Structure model' 1 1 2008-03-24 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-02-07 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Derived calculations' 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_database_status 5 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_database_status.process_site' 4 4 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1DKZ _pdbx_database_status.recvd_initial_deposition_date 1996-06-03 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Zhu, X.' 1 'Zhao, X.' 2 'Burkholder, W.F.' 3 'Gragerov, A.' 4 'Ogata, C.M.' 5 'Gottesman, M.E.' 6 'Hendrickson, W.A.' 7 # _citation.id primary _citation.title 'Structural analysis of substrate binding by the molecular chaperone DnaK.' _citation.journal_abbrev Science _citation.journal_volume 272 _citation.page_first 1606 _citation.page_last 1614 _citation.year 1996 _citation.journal_id_ASTM SCIEAS _citation.country US _citation.journal_id_ISSN 0036-8075 _citation.journal_id_CSD 0038 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 8658133 _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Zhu, X.' 1 ? primary 'Zhao, X.' 2 ? primary 'Burkholder, W.F.' 3 ? primary 'Gragerov, A.' 4 ? primary 'Ogata, C.M.' 5 ? primary 'Gottesman, M.E.' 6 ? primary 'Hendrickson, W.A.' 7 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'SUBSTRATE BINDING DOMAIN OF DNAK' 23806.750 1 ? ? ? ? 2 polymer man 'SUBSTRATE PEPTIDE (7 RESIDUES)' 786.941 1 ? ? ? ? 3 water nat water 18.015 223 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;VLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVSIHVLQGERKRAADNKSLGQFNLDGINPAPRG MPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLNEDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRK QVEEAGDKLPADDKTAIESALTALETALKGEDKAAIEAKMQELAQVSQKLMEIAQQQHA ; ;VLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVSIHVLQGERKRAADNKSLGQFNLDGINPAPRG MPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLNEDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRK QVEEAGDKLPADDKTAIESALTALETALKGEDKAAIEAKMQELAQVSQKLMEIAQQQHA ; A ? 2 'polypeptide(L)' no no NRLLLTG NRLLLTG B ? # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 VAL n 1 2 LEU n 1 3 LEU n 1 4 LEU n 1 5 ASP n 1 6 VAL n 1 7 THR n 1 8 PRO n 1 9 LEU n 1 10 SER n 1 11 LEU n 1 12 GLY n 1 13 ILE n 1 14 GLU n 1 15 THR n 1 16 MET n 1 17 GLY n 1 18 GLY n 1 19 VAL n 1 20 MET n 1 21 THR n 1 22 THR n 1 23 LEU n 1 24 ILE n 1 25 ALA n 1 26 LYS n 1 27 ASN n 1 28 THR n 1 29 THR n 1 30 ILE n 1 31 PRO n 1 32 THR n 1 33 LYS n 1 34 HIS n 1 35 SER n 1 36 GLN n 1 37 VAL n 1 38 PHE n 1 39 SER n 1 40 THR n 1 41 ALA n 1 42 GLU n 1 43 ASP n 1 44 ASN n 1 45 GLN n 1 46 SER n 1 47 ALA n 1 48 VAL n 1 49 SER n 1 50 ILE n 1 51 HIS n 1 52 VAL n 1 53 LEU n 1 54 GLN n 1 55 GLY n 1 56 GLU n 1 57 ARG n 1 58 LYS n 1 59 ARG n 1 60 ALA n 1 61 ALA n 1 62 ASP n 1 63 ASN n 1 64 LYS n 1 65 SER n 1 66 LEU n 1 67 GLY n 1 68 GLN n 1 69 PHE n 1 70 ASN n 1 71 LEU n 1 72 ASP n 1 73 GLY n 1 74 ILE n 1 75 ASN n 1 76 PRO n 1 77 ALA n 1 78 PRO n 1 79 ARG n 1 80 GLY n 1 81 MET n 1 82 PRO n 1 83 GLN n 1 84 ILE n 1 85 GLU n 1 86 VAL n 1 87 THR n 1 88 PHE n 1 89 ASP n 1 90 ILE n 1 91 ASP n 1 92 ALA n 1 93 ASP n 1 94 GLY n 1 95 ILE n 1 96 LEU n 1 97 HIS n 1 98 VAL n 1 99 SER n 1 100 ALA n 1 101 LYS n 1 102 ASP n 1 103 LYS n 1 104 ASN n 1 105 SER n 1 106 GLY n 1 107 LYS n 1 108 GLU n 1 109 GLN n 1 110 LYS n 1 111 ILE n 1 112 THR n 1 113 ILE n 1 114 LYS n 1 115 ALA n 1 116 SER n 1 117 SER n 1 118 GLY n 1 119 LEU n 1 120 ASN n 1 121 GLU n 1 122 ASP n 1 123 GLU n 1 124 ILE n 1 125 GLN n 1 126 LYS n 1 127 MET n 1 128 VAL n 1 129 ARG n 1 130 ASP n 1 131 ALA n 1 132 GLU n 1 133 ALA n 1 134 ASN n 1 135 ALA n 1 136 GLU n 1 137 ALA n 1 138 ASP n 1 139 ARG n 1 140 LYS n 1 141 PHE n 1 142 GLU n 1 143 GLU n 1 144 LEU n 1 145 VAL n 1 146 GLN n 1 147 THR n 1 148 ARG n 1 149 ASN n 1 150 GLN n 1 151 GLY n 1 152 ASP n 1 153 HIS n 1 154 LEU n 1 155 LEU n 1 156 HIS n 1 157 SER n 1 158 THR n 1 159 ARG n 1 160 LYS n 1 161 GLN n 1 162 VAL n 1 163 GLU n 1 164 GLU n 1 165 ALA n 1 166 GLY n 1 167 ASP n 1 168 LYS n 1 169 LEU n 1 170 PRO n 1 171 ALA n 1 172 ASP n 1 173 ASP n 1 174 LYS n 1 175 THR n 1 176 ALA n 1 177 ILE n 1 178 GLU n 1 179 SER n 1 180 ALA n 1 181 LEU n 1 182 THR n 1 183 ALA n 1 184 LEU n 1 185 GLU n 1 186 THR n 1 187 ALA n 1 188 LEU n 1 189 LYS n 1 190 GLY n 1 191 GLU n 1 192 ASP n 1 193 LYS n 1 194 ALA n 1 195 ALA n 1 196 ILE n 1 197 GLU n 1 198 ALA n 1 199 LYS n 1 200 MET n 1 201 GLN n 1 202 GLU n 1 203 LEU n 1 204 ALA n 1 205 GLN n 1 206 VAL n 1 207 SER n 1 208 GLN n 1 209 LYS n 1 210 LEU n 1 211 MET n 1 212 GLU n 1 213 ILE n 1 214 ALA n 1 215 GLN n 1 216 GLN n 1 217 GLN n 1 218 HIS n 1 219 ALA n 2 1 ASN n 2 2 ARG n 2 3 LEU n 2 4 LEU n 2 5 LEU n 2 6 THR n 2 7 GLY n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name ? _entity_src_nat.pdbx_organism_scientific 'Escherichia coli' _entity_src_nat.pdbx_ncbi_taxonomy_id 562 _entity_src_nat.genus Escherichia _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 VAL 1 389 389 VAL VAL A . n A 1 2 LEU 2 390 390 LEU LEU A . n A 1 3 LEU 3 391 391 LEU LEU A . n A 1 4 LEU 4 392 392 LEU LEU A . n A 1 5 ASP 5 393 393 ASP ASP A . n A 1 6 VAL 6 394 394 VAL VAL A . n A 1 7 THR 7 395 395 THR THR A . n A 1 8 PRO 8 396 396 PRO PRO A . n A 1 9 LEU 9 397 397 LEU LEU A . n A 1 10 SER 10 398 398 SER SER A . n A 1 11 LEU 11 399 399 LEU LEU A . n A 1 12 GLY 12 400 400 GLY GLY A . n A 1 13 ILE 13 401 401 ILE ILE A . n A 1 14 GLU 14 402 402 GLU GLU A . n A 1 15 THR 15 403 403 THR THR A . n A 1 16 MET 16 404 404 MET MET A . n A 1 17 GLY 17 405 405 GLY GLY A . n A 1 18 GLY 18 406 406 GLY GLY A . n A 1 19 VAL 19 407 407 VAL VAL A . n A 1 20 MET 20 408 408 MET MET A . n A 1 21 THR 21 409 409 THR THR A . n A 1 22 THR 22 410 410 THR THR A . n A 1 23 LEU 23 411 411 LEU LEU A . n A 1 24 ILE 24 412 412 ILE ILE A . n A 1 25 ALA 25 413 413 ALA ALA A . n A 1 26 LYS 26 414 414 LYS LYS A . n A 1 27 ASN 27 415 415 ASN ASN A . n A 1 28 THR 28 416 416 THR THR A . n A 1 29 THR 29 417 417 THR THR A . n A 1 30 ILE 30 418 418 ILE ILE A . n A 1 31 PRO 31 419 419 PRO PRO A . n A 1 32 THR 32 420 420 THR THR A . n A 1 33 LYS 33 421 421 LYS LYS A . n A 1 34 HIS 34 422 422 HIS HIS A . n A 1 35 SER 35 423 423 SER SER A . n A 1 36 GLN 36 424 424 GLN GLN A . n A 1 37 VAL 37 425 425 VAL VAL A . n A 1 38 PHE 38 426 426 PHE PHE A . n A 1 39 SER 39 427 427 SER SER A . n A 1 40 THR 40 428 428 THR THR A . n A 1 41 ALA 41 429 429 ALA ALA A . n A 1 42 GLU 42 430 430 GLU GLU A . n A 1 43 ASP 43 431 431 ASP ASP A . n A 1 44 ASN 44 432 432 ASN ASN A . n A 1 45 GLN 45 433 433 GLN GLN A . n A 1 46 SER 46 434 434 SER SER A . n A 1 47 ALA 47 435 435 ALA ALA A . n A 1 48 VAL 48 436 436 VAL VAL A . n A 1 49 SER 49 437 437 SER SER A . n A 1 50 ILE 50 438 438 ILE ILE A . n A 1 51 HIS 51 439 439 HIS HIS A . n A 1 52 VAL 52 440 440 VAL VAL A . n A 1 53 LEU 53 441 441 LEU LEU A . n A 1 54 GLN 54 442 442 GLN GLN A . n A 1 55 GLY 55 443 443 GLY GLY A . n A 1 56 GLU 56 444 444 GLU GLU A . n A 1 57 ARG 57 445 445 ARG ARG A . n A 1 58 LYS 58 446 446 LYS LYS A . n A 1 59 ARG 59 447 447 ARG ARG A . n A 1 60 ALA 60 448 448 ALA ALA A . n A 1 61 ALA 61 449 449 ALA ALA A . n A 1 62 ASP 62 450 450 ASP ASP A . n A 1 63 ASN 63 451 451 ASN ASN A . n A 1 64 LYS 64 452 452 LYS LYS A . n A 1 65 SER 65 453 453 SER SER A . n A 1 66 LEU 66 454 454 LEU LEU A . n A 1 67 GLY 67 455 455 GLY GLY A . n A 1 68 GLN 68 456 456 GLN GLN A . n A 1 69 PHE 69 457 457 PHE PHE A . n A 1 70 ASN 70 458 458 ASN ASN A . n A 1 71 LEU 71 459 459 LEU LEU A . n A 1 72 ASP 72 460 460 ASP ASP A . n A 1 73 GLY 73 461 461 GLY GLY A . n A 1 74 ILE 74 462 462 ILE ILE A . n A 1 75 ASN 75 463 463 ASN ASN A . n A 1 76 PRO 76 464 464 PRO PRO A . n A 1 77 ALA 77 465 465 ALA ALA A . n A 1 78 PRO 78 466 466 PRO PRO A . n A 1 79 ARG 79 467 467 ARG ARG A . n A 1 80 GLY 80 468 468 GLY GLY A . n A 1 81 MET 81 469 469 MET MET A . n A 1 82 PRO 82 470 470 PRO PRO A . n A 1 83 GLN 83 471 471 GLN GLN A . n A 1 84 ILE 84 472 472 ILE ILE A . n A 1 85 GLU 85 473 473 GLU GLU A . n A 1 86 VAL 86 474 474 VAL VAL A . n A 1 87 THR 87 475 475 THR THR A . n A 1 88 PHE 88 476 476 PHE PHE A . n A 1 89 ASP 89 477 477 ASP ASP A . n A 1 90 ILE 90 478 478 ILE ILE A . n A 1 91 ASP 91 479 479 ASP ASP A . n A 1 92 ALA 92 480 480 ALA ALA A . n A 1 93 ASP 93 481 481 ASP ASP A . n A 1 94 GLY 94 482 482 GLY GLY A . n A 1 95 ILE 95 483 483 ILE ILE A . n A 1 96 LEU 96 484 484 LEU LEU A . n A 1 97 HIS 97 485 485 HIS HIS A . n A 1 98 VAL 98 486 486 VAL VAL A . n A 1 99 SER 99 487 487 SER SER A . n A 1 100 ALA 100 488 488 ALA ALA A . n A 1 101 LYS 101 489 489 LYS LYS A . n A 1 102 ASP 102 490 490 ASP ASP A . n A 1 103 LYS 103 491 491 LYS LYS A . n A 1 104 ASN 104 492 492 ASN ASN A . n A 1 105 SER 105 493 493 SER SER A . n A 1 106 GLY 106 494 494 GLY GLY A . n A 1 107 LYS 107 495 495 LYS LYS A . n A 1 108 GLU 108 496 496 GLU GLU A . n A 1 109 GLN 109 497 497 GLN GLN A . n A 1 110 LYS 110 498 498 LYS LYS A . n A 1 111 ILE 111 499 499 ILE ILE A . n A 1 112 THR 112 500 500 THR THR A . n A 1 113 ILE 113 501 501 ILE ILE A . n A 1 114 LYS 114 502 502 LYS LYS A . n A 1 115 ALA 115 503 503 ALA ALA A . n A 1 116 SER 116 504 504 SER SER A . n A 1 117 SER 117 505 505 SER SER A . n A 1 118 GLY 118 506 506 GLY GLY A . n A 1 119 LEU 119 507 507 LEU LEU A . n A 1 120 ASN 120 508 508 ASN ASN A . n A 1 121 GLU 121 509 509 GLU GLU A . n A 1 122 ASP 122 510 510 ASP ASP A . n A 1 123 GLU 123 511 511 GLU GLU A . n A 1 124 ILE 124 512 512 ILE ILE A . n A 1 125 GLN 125 513 513 GLN GLN A . n A 1 126 LYS 126 514 514 LYS LYS A . n A 1 127 MET 127 515 515 MET MET A . n A 1 128 VAL 128 516 516 VAL VAL A . n A 1 129 ARG 129 517 517 ARG ARG A . n A 1 130 ASP 130 518 518 ASP ASP A . n A 1 131 ALA 131 519 519 ALA ALA A . n A 1 132 GLU 132 520 520 GLU GLU A . n A 1 133 ALA 133 521 521 ALA ALA A . n A 1 134 ASN 134 522 522 ASN ASN A . n A 1 135 ALA 135 523 523 ALA ALA A . n A 1 136 GLU 136 524 524 GLU GLU A . n A 1 137 ALA 137 525 525 ALA ALA A . n A 1 138 ASP 138 526 526 ASP ASP A . n A 1 139 ARG 139 527 527 ARG ARG A . n A 1 140 LYS 140 528 528 LYS LYS A . n A 1 141 PHE 141 529 529 PHE PHE A . n A 1 142 GLU 142 530 530 GLU GLU A . n A 1 143 GLU 143 531 531 GLU GLU A . n A 1 144 LEU 144 532 532 LEU LEU A . n A 1 145 VAL 145 533 533 VAL VAL A . n A 1 146 GLN 146 534 534 GLN GLN A . n A 1 147 THR 147 535 535 THR THR A . n A 1 148 ARG 148 536 536 ARG ARG A . n A 1 149 ASN 149 537 537 ASN ASN A . n A 1 150 GLN 150 538 538 GLN GLN A . n A 1 151 GLY 151 539 539 GLY GLY A . n A 1 152 ASP 152 540 540 ASP ASP A . n A 1 153 HIS 153 541 541 HIS HIS A . n A 1 154 LEU 154 542 542 LEU LEU A . n A 1 155 LEU 155 543 543 LEU LEU A . n A 1 156 HIS 156 544 544 HIS HIS A . n A 1 157 SER 157 545 545 SER SER A . n A 1 158 THR 158 546 546 THR THR A . n A 1 159 ARG 159 547 547 ARG ARG A . n A 1 160 LYS 160 548 548 LYS LYS A . n A 1 161 GLN 161 549 549 GLN GLN A . n A 1 162 VAL 162 550 550 VAL VAL A . n A 1 163 GLU 163 551 551 GLU GLU A . n A 1 164 GLU 164 552 552 GLU GLU A . n A 1 165 ALA 165 553 553 ALA ALA A . n A 1 166 GLY 166 554 554 GLY GLY A . n A 1 167 ASP 167 555 555 ASP ASP A . n A 1 168 LYS 168 556 556 LYS LYS A . n A 1 169 LEU 169 557 557 LEU LEU A . n A 1 170 PRO 170 558 558 PRO PRO A . n A 1 171 ALA 171 559 559 ALA ALA A . n A 1 172 ASP 172 560 560 ASP ASP A . n A 1 173 ASP 173 561 561 ASP ASP A . n A 1 174 LYS 174 562 562 LYS LYS A . n A 1 175 THR 175 563 563 THR THR A . n A 1 176 ALA 176 564 564 ALA ALA A . n A 1 177 ILE 177 565 565 ILE ILE A . n A 1 178 GLU 178 566 566 GLU GLU A . n A 1 179 SER 179 567 567 SER SER A . n A 1 180 ALA 180 568 568 ALA ALA A . n A 1 181 LEU 181 569 569 LEU LEU A . n A 1 182 THR 182 570 570 THR THR A . n A 1 183 ALA 183 571 571 ALA ALA A . n A 1 184 LEU 184 572 572 LEU LEU A . n A 1 185 GLU 185 573 573 GLU GLU A . n A 1 186 THR 186 574 574 THR THR A . n A 1 187 ALA 187 575 575 ALA ALA A . n A 1 188 LEU 188 576 576 LEU LEU A . n A 1 189 LYS 189 577 577 LYS LYS A . n A 1 190 GLY 190 578 578 GLY GLY A . n A 1 191 GLU 191 579 579 GLU GLU A . n A 1 192 ASP 192 580 580 ASP ASP A . n A 1 193 LYS 193 581 581 LYS LYS A . n A 1 194 ALA 194 582 582 ALA ALA A . n A 1 195 ALA 195 583 583 ALA ALA A . n A 1 196 ILE 196 584 584 ILE ILE A . n A 1 197 GLU 197 585 585 GLU GLU A . n A 1 198 ALA 198 586 586 ALA ALA A . n A 1 199 LYS 199 587 587 LYS LYS A . n A 1 200 MET 200 588 588 MET MET A . n A 1 201 GLN 201 589 589 GLN GLN A . n A 1 202 GLU 202 590 590 GLU GLU A . n A 1 203 LEU 203 591 591 LEU LEU A . n A 1 204 ALA 204 592 592 ALA ALA A . n A 1 205 GLN 205 593 593 GLN GLN A . n A 1 206 VAL 206 594 594 VAL VAL A . n A 1 207 SER 207 595 595 SER SER A . n A 1 208 GLN 208 596 596 GLN GLN A . n A 1 209 LYS 209 597 597 LYS LYS A . n A 1 210 LEU 210 598 598 LEU LEU A . n A 1 211 MET 211 599 599 MET MET A . n A 1 212 GLU 212 600 600 GLU GLU A . n A 1 213 ILE 213 601 601 ILE ILE A . n A 1 214 ALA 214 602 602 ALA ALA A . n A 1 215 GLN 215 603 603 GLN GLN A . n A 1 216 GLN 216 604 ? ? ? A . n A 1 217 GLN 217 605 ? ? ? A . n A 1 218 HIS 218 606 ? ? ? A . n A 1 219 ALA 219 607 ? ? ? A . n B 2 1 ASN 1 1 1 ASN ASN B . n B 2 2 ARG 2 2 2 ARG ARG B . n B 2 3 LEU 3 3 3 LEU LEU B . n B 2 4 LEU 4 4 4 LEU LEU B . n B 2 5 LEU 5 5 5 LEU LEU B . n B 2 6 THR 6 6 6 THR THR B . n B 2 7 GLY 7 7 7 GLY GLY B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 HOH 1 2000 2000 HOH HOH A . C 3 HOH 2 2001 2001 HOH HOH A . C 3 HOH 3 2002 2002 HOH HOH A . C 3 HOH 4 2003 2003 HOH HOH A . C 3 HOH 5 2004 2004 HOH HOH A . C 3 HOH 6 2005 2005 HOH HOH A . C 3 HOH 7 2007 2007 HOH HOH A . C 3 HOH 8 2008 2008 HOH HOH A . C 3 HOH 9 2009 2009 HOH HOH A . C 3 HOH 10 2012 2012 HOH HOH A . C 3 HOH 11 2013 2013 HOH HOH A . C 3 HOH 12 2015 2015 HOH HOH A . C 3 HOH 13 2016 2016 HOH HOH A . C 3 HOH 14 2017 2017 HOH HOH A . C 3 HOH 15 2018 2018 HOH HOH A . C 3 HOH 16 2020 2020 HOH HOH A . C 3 HOH 17 2021 2021 HOH HOH A . C 3 HOH 18 2022 2022 HOH HOH A . C 3 HOH 19 2023 2023 HOH HOH A . C 3 HOH 20 2024 2024 HOH HOH A . C 3 HOH 21 2025 2025 HOH HOH A . C 3 HOH 22 2026 2026 HOH HOH A . C 3 HOH 23 2027 2027 HOH HOH A . C 3 HOH 24 2028 2028 HOH HOH A . C 3 HOH 25 2029 2029 HOH HOH A . C 3 HOH 26 2030 2030 HOH HOH A . C 3 HOH 27 2032 2032 HOH HOH A . C 3 HOH 28 2033 2033 HOH HOH A . C 3 HOH 29 2034 2034 HOH HOH A . C 3 HOH 30 2035 2035 HOH HOH A . C 3 HOH 31 2036 2036 HOH HOH A . C 3 HOH 32 2037 2037 HOH HOH A . C 3 HOH 33 2038 2038 HOH HOH A . C 3 HOH 34 2039 2039 HOH HOH A . C 3 HOH 35 2041 2041 HOH HOH A . C 3 HOH 36 2042 2042 HOH HOH A . C 3 HOH 37 2044 2044 HOH HOH A . C 3 HOH 38 2045 2045 HOH HOH A . C 3 HOH 39 2046 2046 HOH HOH A . C 3 HOH 40 2047 2047 HOH HOH A . C 3 HOH 41 2048 2048 HOH HOH A . C 3 HOH 42 2049 2049 HOH HOH A . C 3 HOH 43 2051 2051 HOH HOH A . C 3 HOH 44 2052 2052 HOH HOH A . C 3 HOH 45 2053 2053 HOH HOH A . C 3 HOH 46 2054 2054 HOH HOH A . C 3 HOH 47 2055 2055 HOH HOH A . C 3 HOH 48 2056 2056 HOH HOH A . C 3 HOH 49 2057 2057 HOH HOH A . C 3 HOH 50 2058 2058 HOH HOH A . C 3 HOH 51 2059 2059 HOH HOH A . C 3 HOH 52 2060 2060 HOH HOH A . C 3 HOH 53 2063 2063 HOH HOH A . C 3 HOH 54 2064 2064 HOH HOH A . C 3 HOH 55 2065 2065 HOH HOH A . C 3 HOH 56 2067 2067 HOH HOH A . C 3 HOH 57 2068 2068 HOH HOH A . C 3 HOH 58 2070 2070 HOH HOH A . C 3 HOH 59 2072 2072 HOH HOH A . C 3 HOH 60 2077 2077 HOH HOH A . C 3 HOH 61 2078 2078 HOH HOH A . C 3 HOH 62 2080 2080 HOH HOH A . C 3 HOH 63 2081 2081 HOH HOH A . C 3 HOH 64 2082 2082 HOH HOH A . C 3 HOH 65 2083 2083 HOH HOH A . C 3 HOH 66 2084 2084 HOH HOH A . C 3 HOH 67 2085 2085 HOH HOH A . C 3 HOH 68 2086 2086 HOH HOH A . C 3 HOH 69 2087 2087 HOH HOH A . C 3 HOH 70 2088 2088 HOH HOH A . C 3 HOH 71 2089 2089 HOH HOH A . C 3 HOH 72 2092 2092 HOH HOH A . C 3 HOH 73 2093 2093 HOH HOH A . C 3 HOH 74 2094 2094 HOH HOH A . C 3 HOH 75 2095 2095 HOH HOH A . C 3 HOH 76 2098 2098 HOH HOH A . C 3 HOH 77 2099 2099 HOH HOH A . C 3 HOH 78 2100 2100 HOH HOH A . C 3 HOH 79 2101 2101 HOH HOH A . C 3 HOH 80 2102 2102 HOH HOH A . C 3 HOH 81 2104 2104 HOH HOH A . C 3 HOH 82 2105 2105 HOH HOH A . C 3 HOH 83 2106 2106 HOH HOH A . C 3 HOH 84 2107 2107 HOH HOH A . C 3 HOH 85 2108 2108 HOH HOH A . C 3 HOH 86 2110 2110 HOH HOH A . C 3 HOH 87 2111 2111 HOH HOH A . C 3 HOH 88 2113 2113 HOH HOH A . C 3 HOH 89 2114 2114 HOH HOH A . C 3 HOH 90 2116 2116 HOH HOH A . C 3 HOH 91 2121 2121 HOH HOH A . C 3 HOH 92 2122 2122 HOH HOH A . C 3 HOH 93 2123 2123 HOH HOH A . C 3 HOH 94 2125 2125 HOH HOH A . C 3 HOH 95 2126 2126 HOH HOH A . C 3 HOH 96 2127 2127 HOH HOH A . C 3 HOH 97 2128 2128 HOH HOH A . C 3 HOH 98 2129 2129 HOH HOH A . C 3 HOH 99 2130 2130 HOH HOH A . C 3 HOH 100 2131 2131 HOH HOH A . C 3 HOH 101 2133 2133 HOH HOH A . C 3 HOH 102 2134 2134 HOH HOH A . C 3 HOH 103 2135 2135 HOH HOH A . C 3 HOH 104 2136 2136 HOH HOH A . C 3 HOH 105 2137 2137 HOH HOH A . C 3 HOH 106 2138 2138 HOH HOH A . C 3 HOH 107 2139 2139 HOH HOH A . C 3 HOH 108 2140 2140 HOH HOH A . C 3 HOH 109 2142 2142 HOH HOH A . C 3 HOH 110 2143 2143 HOH HOH A . C 3 HOH 111 2145 2145 HOH HOH A . C 3 HOH 112 2146 2146 HOH HOH A . C 3 HOH 113 2147 2147 HOH HOH A . C 3 HOH 114 2148 2148 HOH HOH A . C 3 HOH 115 2149 2149 HOH HOH A . C 3 HOH 116 2150 2150 HOH HOH A . C 3 HOH 117 2151 2151 HOH HOH A . C 3 HOH 118 2153 2153 HOH HOH A . C 3 HOH 119 2157 2157 HOH HOH A . C 3 HOH 120 2158 2158 HOH HOH A . C 3 HOH 121 2159 2159 HOH HOH A . C 3 HOH 122 2161 2161 HOH HOH A . C 3 HOH 123 2162 2162 HOH HOH A . C 3 HOH 124 2163 2163 HOH HOH A . C 3 HOH 125 2164 2164 HOH HOH A . C 3 HOH 126 2165 2165 HOH HOH A . C 3 HOH 127 2167 2167 HOH HOH A . C 3 HOH 128 2168 2168 HOH HOH A . C 3 HOH 129 2169 2169 HOH HOH A . C 3 HOH 130 2171 2171 HOH HOH A . C 3 HOH 131 2172 2172 HOH HOH A . C 3 HOH 132 2173 2173 HOH HOH A . C 3 HOH 133 2174 2174 HOH HOH A . C 3 HOH 134 2175 2175 HOH HOH A . C 3 HOH 135 2176 2176 HOH HOH A . C 3 HOH 136 2177 2177 HOH HOH A . C 3 HOH 137 2178 2178 HOH HOH A . C 3 HOH 138 2179 2179 HOH HOH A . C 3 HOH 139 2181 2181 HOH HOH A . C 3 HOH 140 2182 2182 HOH HOH A . C 3 HOH 141 2185 2185 HOH HOH A . C 3 HOH 142 2186 2186 HOH HOH A . C 3 HOH 143 2188 2188 HOH HOH A . C 3 HOH 144 2191 2191 HOH HOH A . C 3 HOH 145 2192 2192 HOH HOH A . C 3 HOH 146 2193 2193 HOH HOH A . C 3 HOH 147 2194 2194 HOH HOH A . C 3 HOH 148 2195 2195 HOH HOH A . C 3 HOH 149 2196 2196 HOH HOH A . C 3 HOH 150 2197 2197 HOH HOH A . C 3 HOH 151 2198 2198 HOH HOH A . C 3 HOH 152 2199 2199 HOH HOH A . C 3 HOH 153 2200 2200 HOH HOH A . C 3 HOH 154 2202 2202 HOH HOH A . C 3 HOH 155 2204 2204 HOH HOH A . C 3 HOH 156 2205 2205 HOH HOH A . C 3 HOH 157 2206 2206 HOH HOH A . C 3 HOH 158 2207 2207 HOH HOH A . C 3 HOH 159 2208 2208 HOH HOH A . C 3 HOH 160 2209 2209 HOH HOH A . C 3 HOH 161 2210 2210 HOH HOH A . C 3 HOH 162 2212 2212 HOH HOH A . C 3 HOH 163 2213 2213 HOH HOH A . C 3 HOH 164 2215 2215 HOH HOH A . C 3 HOH 165 2216 2216 HOH HOH A . C 3 HOH 166 2218 2218 HOH HOH A . C 3 HOH 167 2219 2219 HOH HOH A . C 3 HOH 168 2221 2221 HOH HOH A . C 3 HOH 169 2222 2222 HOH HOH A . C 3 HOH 170 2225 2225 HOH HOH A . C 3 HOH 171 2230 2230 HOH HOH A . C 3 HOH 172 2231 2231 HOH HOH A . C 3 HOH 173 2233 2233 HOH HOH A . C 3 HOH 174 2234 2234 HOH HOH A . C 3 HOH 175 3200 3200 HOH HOH A . C 3 HOH 176 3203 3203 HOH HOH A . C 3 HOH 177 3204 3204 HOH HOH A . C 3 HOH 178 3206 3206 HOH HOH A . C 3 HOH 179 3208 3208 HOH HOH A . C 3 HOH 180 3210 3210 HOH HOH A . C 3 HOH 181 3212 3212 HOH HOH A . C 3 HOH 182 3214 3214 HOH HOH A . C 3 HOH 183 3215 3215 HOH HOH A . C 3 HOH 184 3216 3216 HOH HOH A . C 3 HOH 185 3217 3217 HOH HOH A . C 3 HOH 186 3218 3218 HOH HOH A . C 3 HOH 187 3220 3220 HOH HOH A . C 3 HOH 188 3221 3221 HOH HOH A . C 3 HOH 189 3222 3222 HOH HOH A . C 3 HOH 190 3223 3223 HOH HOH A . C 3 HOH 191 3224 3224 HOH HOH A . C 3 HOH 192 3226 3226 HOH HOH A . C 3 HOH 193 3227 3227 HOH HOH A . C 3 HOH 194 3228 3228 HOH HOH A . C 3 HOH 195 3229 3229 HOH HOH A . C 3 HOH 196 3230 3230 HOH HOH A . C 3 HOH 197 3232 3232 HOH HOH A . C 3 HOH 198 3233 3233 HOH HOH A . C 3 HOH 199 3235 3235 HOH HOH A . C 3 HOH 200 3236 3236 HOH HOH A . C 3 HOH 201 3238 3238 HOH HOH A . C 3 HOH 202 3239 3239 HOH HOH A . C 3 HOH 203 3240 3240 HOH HOH A . C 3 HOH 204 3242 3242 HOH HOH A . C 3 HOH 205 3243 3243 HOH HOH A . C 3 HOH 206 3244 3244 HOH HOH A . C 3 HOH 207 3245 3245 HOH HOH A . C 3 HOH 208 3246 3246 HOH HOH A . C 3 HOH 209 3247 3247 HOH HOH A . C 3 HOH 210 3250 3250 HOH HOH A . C 3 HOH 211 3251 3251 HOH HOH A . C 3 HOH 212 3252 3252 HOH HOH A . C 3 HOH 213 3253 3253 HOH HOH A . C 3 HOH 214 3254 3254 HOH HOH A . C 3 HOH 215 3257 3257 HOH HOH A . C 3 HOH 216 3258 3258 HOH HOH A . D 3 HOH 1 2019 2019 HOH HOH B . D 3 HOH 2 2120 2120 HOH HOH B . D 3 HOH 3 2141 2141 HOH HOH B . D 3 HOH 4 2201 2201 HOH HOH B . D 3 HOH 5 2227 2227 HOH HOH B . D 3 HOH 6 3234 3234 HOH HOH B . D 3 HOH 7 3256 3256 HOH HOH B . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A VAL 389 ? CG1 ? A VAL 1 CG1 2 1 Y 1 A VAL 389 ? CG2 ? A VAL 1 CG2 3 1 Y 1 A LEU 391 ? CG ? A LEU 3 CG 4 1 Y 1 A LEU 391 ? CD1 ? A LEU 3 CD1 5 1 Y 1 A LEU 391 ? CD2 ? A LEU 3 CD2 6 1 Y 1 A GLU 430 ? CG ? A GLU 42 CG 7 1 Y 1 A GLU 430 ? CD ? A GLU 42 CD 8 1 Y 1 A GLU 430 ? OE1 ? A GLU 42 OE1 9 1 Y 1 A GLU 430 ? OE2 ? A GLU 42 OE2 10 1 Y 1 A GLU 509 ? CG ? A GLU 121 CG 11 1 Y 1 A GLU 509 ? CD ? A GLU 121 CD 12 1 Y 1 A GLU 509 ? OE1 ? A GLU 121 OE1 13 1 Y 1 A GLU 509 ? OE2 ? A GLU 121 OE2 14 1 Y 1 A GLN 513 ? CG ? A GLN 125 CG 15 1 Y 1 A GLN 513 ? CD ? A GLN 125 CD 16 1 Y 1 A GLN 513 ? OE1 ? A GLN 125 OE1 17 1 Y 1 A GLN 513 ? NE2 ? A GLN 125 NE2 18 1 Y 1 A GLU 520 ? CG ? A GLU 132 CG 19 1 Y 1 A GLU 520 ? CD ? A GLU 132 CD 20 1 Y 1 A GLU 520 ? OE1 ? A GLU 132 OE1 21 1 Y 1 A GLU 520 ? OE2 ? A GLU 132 OE2 22 1 Y 1 A GLU 524 ? CG ? A GLU 136 CG 23 1 Y 1 A GLU 524 ? CD ? A GLU 136 CD 24 1 Y 1 A GLU 524 ? OE1 ? A GLU 136 OE1 25 1 Y 1 A GLU 524 ? OE2 ? A GLU 136 OE2 26 1 Y 1 A GLU 530 ? CG ? A GLU 142 CG 27 1 Y 1 A GLU 530 ? CD ? A GLU 142 CD 28 1 Y 1 A GLU 530 ? OE1 ? A GLU 142 OE1 29 1 Y 1 A GLU 530 ? OE2 ? A GLU 142 OE2 30 1 Y 1 A ARG 536 ? CG ? A ARG 148 CG 31 1 Y 1 A ARG 536 ? CD ? A ARG 148 CD 32 1 Y 1 A ARG 536 ? NE ? A ARG 148 NE 33 1 Y 1 A ARG 536 ? CZ ? A ARG 148 CZ 34 1 Y 1 A ARG 536 ? NH1 ? A ARG 148 NH1 35 1 Y 1 A ARG 536 ? NH2 ? A ARG 148 NH2 36 1 Y 1 A LYS 548 ? CG ? A LYS 160 CG 37 1 Y 1 A LYS 548 ? CD ? A LYS 160 CD 38 1 Y 1 A LYS 548 ? CE ? A LYS 160 CE 39 1 Y 1 A LYS 548 ? NZ ? A LYS 160 NZ 40 1 Y 1 A GLU 551 ? CG ? A GLU 163 CG 41 1 Y 1 A GLU 551 ? CD ? A GLU 163 CD 42 1 Y 1 A GLU 551 ? OE1 ? A GLU 163 OE1 43 1 Y 1 A GLU 551 ? OE2 ? A GLU 163 OE2 44 1 Y 1 A GLU 552 ? CG ? A GLU 164 CG 45 1 Y 1 A GLU 552 ? CD ? A GLU 164 CD 46 1 Y 1 A GLU 552 ? OE1 ? A GLU 164 OE1 47 1 Y 1 A GLU 552 ? OE2 ? A GLU 164 OE2 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal X-PLOR 'model building' . ? 1 X-PLOR refinement . ? 2 X-PLOR phasing . ? 3 # _cell.entry_id 1DKZ _cell.length_a 94.400 _cell.length_b 116.700 _cell.length_c 37.300 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1DKZ _symmetry.space_group_name_H-M 'I 2 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 # _exptl.entry_id 1DKZ _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.09 _exptl_crystal.density_percent_sol 43. _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source ? _diffrn_source.type ? _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1DKZ _reflns.observed_criterion_sigma_I 2. _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 20.0 _reflns.d_resolution_high 2.0 _reflns.number_obs 13127 _reflns.number_all ? _reflns.percent_possible_obs 91.5 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 37 _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _refine.entry_id 1DKZ _refine.ls_number_reflns_obs 12016 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 5.0 _refine.ls_d_res_high 2.0 _refine.ls_percent_reflns_obs 84.7 _refine.ls_R_factor_obs 0.1930000 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1930000 _refine.ls_R_factor_R_free 0.2740000 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean 22.5 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1639 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 223 _refine_hist.number_atoms_total 1862 _refine_hist.d_res_high 2.0 _refine_hist.d_res_low 5.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.008 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 1.25 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d 23.58 ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d 1.26 ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _database_PDB_matrix.entry_id 1DKZ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1DKZ _struct.title 'THE SUBSTRATE BINDING DOMAIN OF DNAK IN COMPLEX WITH A SUBSTRATE PEPTIDE, DETERMINED FROM TYPE 1 NATIVE CRYSTALS' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1DKZ _struct_keywords.pdbx_keywords 'COMPLEX (MOLECULAR CHAPERONE/PEPTIDE)' _struct_keywords.text 'DNAK, HEAT SHOCK PROTEIN 70 KDA (HSP70), COMPLEX (MOLECULAR CHAPERONE-PEPTIDE), COMPLEX (MOLECULAR CHAPERONE-PEPTIDE) complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_db_accession _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_db_isoform 1 UNP DNAK_ECOLI 1 P0A6Y8 1 ;GKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEE VQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIA GLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLV EEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEPLK VALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDVKDVLLLDVTPLSLGI ETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDAD GILHVSAKDKNSGKEQKITIKASSGLNEDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRKQVEEAGDKLPADD KTAIESALTALETALKGEDKAAIEAKMQELAQVSQKLMEIAQQQHAQQQTAGADASANNAKDDDVVDAEFEEVKDKK ; ? 2 PDB 1DKZ 2 1DKZ ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1DKZ A 1 ? 219 ? P0A6Y8 388 ? 606 ? 389 607 2 2 1DKZ B 1 ? 7 ? 1DKZ 1 ? 7 ? 1 7 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 1DKZ _struct_ref_seq_dif.mon_id SER _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 49 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P0A6Y8 _struct_ref_seq_dif.db_mon_id THR _struct_ref_seq_dif.pdbx_seq_db_seq_num 436 _struct_ref_seq_dif.details conflict _struct_ref_seq_dif.pdbx_auth_seq_num 437 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA,PQS tetrameric 4 2 software_defined_assembly PISA octameric 8 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5560 ? 1 MORE -23 ? 1 'SSA (A^2)' 20840 ? 2 'ABSA (A^2)' 14560 ? 2 MORE -76 ? 2 'SSA (A^2)' 38240 ? # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1,2 A,B,C,D 2 1,3,2,4 A,B,C,D # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 3_657 -x+1,y,-z+2 -1.0000000000 0.0000000000 0.0000000000 94.4000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 74.6000000000 3 'crystal symmetry operation' 2_675 -x+1,-y+2,z -1.0000000000 0.0000000000 0.0000000000 94.4000000000 0.0000000000 -1.0000000000 0.0000000000 233.4000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 4 'crystal symmetry operation' 4_577 x,-y+2,-z+2 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 233.4000000000 0.0000000000 0.0000000000 -1.0000000000 74.6000000000 # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ALA A 60 ? ASP A 62 ? ALA A 448 ASP A 450 5 ? 3 HELX_P HELX_P2 2 GLU A 121 ? ALA A 133 ? GLU A 509 ALA A 521 1 ? 13 HELX_P HELX_P3 3 ALA A 135 ? LYS A 168 ? ALA A 523 LYS A 556 1 ? 34 HELX_P HELX_P4 4 ALA A 171 ? LYS A 189 ? ALA A 559 LYS A 577 1 ? 19 HELX_P HELX_P5 5 LYS A 193 ? VAL A 206 ? LYS A 581 VAL A 594 1 ? 14 HELX_P HELX_P6 6 GLN A 208 ? ALA A 214 ? GLN A 596 ALA A 602 1 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id ILE _struct_mon_prot_cis.label_seq_id 30 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id ILE _struct_mon_prot_cis.auth_seq_id 418 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 31 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 419 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 0.21 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 19 ? ILE A 24 ? VAL A 407 ILE A 412 A 2 LEU A 11 ? THR A 15 ? LEU A 399 THR A 403 A 3 ALA A 47 ? GLN A 54 ? ALA A 435 GLN A 442 A 4 LYS A 64 ? ASP A 72 ? LYS A 452 ASP A 460 B 1 ARG B 2 ? LEU B 4 ? ARG B 2 LEU B 4 B 2 THR A 32 ? THR A 40 ? THR A 420 THR A 428 B 3 ILE A 84 ? ILE A 90 ? ILE A 472 ILE A 478 B 4 LEU A 96 ? ASP A 102 ? LEU A 484 ASP A 490 B 5 GLU A 108 ? ILE A 113 ? GLU A 496 ILE A 501 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O VAL A 19 ? O VAL A 407 N THR A 15 ? N THR A 403 A 2 3 O GLY A 12 ? O GLY A 400 N LEU A 53 ? N LEU A 441 A 3 4 O VAL A 48 ? O VAL A 436 N LEU A 71 ? N LEU A 459 B 1 2 O ARG B 2 ? O ARG B 2 N SER A 39 ? N SER A 427 B 2 3 O THR A 32 ? O THR A 420 N ILE A 90 ? N ILE A 478 B 3 4 O GLU A 85 ? O GLU A 473 N LYS A 101 ? N LYS A 489 B 4 5 O LEU A 96 ? O LEU A 484 N ILE A 113 ? N ILE A 501 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 C _pdbx_validate_rmsd_bond.auth_asym_id_1 B _pdbx_validate_rmsd_bond.auth_comp_id_1 GLY _pdbx_validate_rmsd_bond.auth_seq_id_1 7 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 OXT _pdbx_validate_rmsd_bond.auth_asym_id_2 B _pdbx_validate_rmsd_bond.auth_comp_id_2 GLY _pdbx_validate_rmsd_bond.auth_seq_id_2 7 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 3.551 _pdbx_validate_rmsd_bond.bond_target_value 1.229 _pdbx_validate_rmsd_bond.bond_deviation 2.322 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.019 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE B ARG 2 ? ? CZ B ARG 2 ? ? NH2 B ARG 2 ? ? 123.31 120.30 3.01 0.50 N 2 1 O B THR 6 ? ? C B THR 6 ? ? N B GLY 7 ? ? 108.32 123.20 -14.88 1.70 Y # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLN 604 ? A GLN 216 2 1 Y 1 A GLN 605 ? A GLN 217 3 1 Y 1 A HIS 606 ? A HIS 218 4 1 Y 1 A ALA 607 ? A ALA 219 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 HIS N N N N 123 HIS CA C N S 124 HIS C C N N 125 HIS O O N N 126 HIS CB C N N 127 HIS CG C Y N 128 HIS ND1 N Y N 129 HIS CD2 C Y N 130 HIS CE1 C Y N 131 HIS NE2 N Y N 132 HIS OXT O N N 133 HIS H H N N 134 HIS H2 H N N 135 HIS HA H N N 136 HIS HB2 H N N 137 HIS HB3 H N N 138 HIS HD1 H N N 139 HIS HD2 H N N 140 HIS HE1 H N N 141 HIS HE2 H N N 142 HIS HXT H N N 143 HOH O O N N 144 HOH H1 H N N 145 HOH H2 H N N 146 ILE N N N N 147 ILE CA C N S 148 ILE C C N N 149 ILE O O N N 150 ILE CB C N S 151 ILE CG1 C N N 152 ILE CG2 C N N 153 ILE CD1 C N N 154 ILE OXT O N N 155 ILE H H N N 156 ILE H2 H N N 157 ILE HA H N N 158 ILE HB H N N 159 ILE HG12 H N N 160 ILE HG13 H N N 161 ILE HG21 H N N 162 ILE HG22 H N N 163 ILE HG23 H N N 164 ILE HD11 H N N 165 ILE HD12 H N N 166 ILE HD13 H N N 167 ILE HXT H N N 168 LEU N N N N 169 LEU CA C N S 170 LEU C C N N 171 LEU O O N N 172 LEU CB C N N 173 LEU CG C N N 174 LEU CD1 C N N 175 LEU CD2 C N N 176 LEU OXT O N N 177 LEU H H N N 178 LEU H2 H N N 179 LEU HA H N N 180 LEU HB2 H N N 181 LEU HB3 H N N 182 LEU HG H N N 183 LEU HD11 H N N 184 LEU HD12 H N N 185 LEU HD13 H N N 186 LEU HD21 H N N 187 LEU HD22 H N N 188 LEU HD23 H N N 189 LEU HXT H N N 190 LYS N N N N 191 LYS CA C N S 192 LYS C C N N 193 LYS O O N N 194 LYS CB C N N 195 LYS CG C N N 196 LYS CD C N N 197 LYS CE C N N 198 LYS NZ N N N 199 LYS OXT O N N 200 LYS H H N N 201 LYS H2 H N N 202 LYS HA H N N 203 LYS HB2 H N N 204 LYS HB3 H N N 205 LYS HG2 H N N 206 LYS HG3 H N N 207 LYS HD2 H N N 208 LYS HD3 H N N 209 LYS HE2 H N N 210 LYS HE3 H N N 211 LYS HZ1 H N N 212 LYS HZ2 H N N 213 LYS HZ3 H N N 214 LYS HXT H N N 215 MET N N N N 216 MET CA C N S 217 MET C C N N 218 MET O O N N 219 MET CB C N N 220 MET CG C N N 221 MET SD S N N 222 MET CE C N N 223 MET OXT O N N 224 MET H H N N 225 MET H2 H N N 226 MET HA H N N 227 MET HB2 H N N 228 MET HB3 H N N 229 MET HG2 H N N 230 MET HG3 H N N 231 MET HE1 H N N 232 MET HE2 H N N 233 MET HE3 H N N 234 MET HXT H N N 235 PHE N N N N 236 PHE CA C N S 237 PHE C C N N 238 PHE O O N N 239 PHE CB C N N 240 PHE CG C Y N 241 PHE CD1 C Y N 242 PHE CD2 C Y N 243 PHE CE1 C Y N 244 PHE CE2 C Y N 245 PHE CZ C Y N 246 PHE OXT O N N 247 PHE H H N N 248 PHE H2 H N N 249 PHE HA H N N 250 PHE HB2 H N N 251 PHE HB3 H N N 252 PHE HD1 H N N 253 PHE HD2 H N N 254 PHE HE1 H N N 255 PHE HE2 H N N 256 PHE HZ H N N 257 PHE HXT H N N 258 PRO N N N N 259 PRO CA C N S 260 PRO C C N N 261 PRO O O N N 262 PRO CB C N N 263 PRO CG C N N 264 PRO CD C N N 265 PRO OXT O N N 266 PRO H H N N 267 PRO HA H N N 268 PRO HB2 H N N 269 PRO HB3 H N N 270 PRO HG2 H N N 271 PRO HG3 H N N 272 PRO HD2 H N N 273 PRO HD3 H N N 274 PRO HXT H N N 275 SER N N N N 276 SER CA C N S 277 SER C C N N 278 SER O O N N 279 SER CB C N N 280 SER OG O N N 281 SER OXT O N N 282 SER H H N N 283 SER H2 H N N 284 SER HA H N N 285 SER HB2 H N N 286 SER HB3 H N N 287 SER HG H N N 288 SER HXT H N N 289 THR N N N N 290 THR CA C N S 291 THR C C N N 292 THR O O N N 293 THR CB C N R 294 THR OG1 O N N 295 THR CG2 C N N 296 THR OXT O N N 297 THR H H N N 298 THR H2 H N N 299 THR HA H N N 300 THR HB H N N 301 THR HG1 H N N 302 THR HG21 H N N 303 THR HG22 H N N 304 THR HG23 H N N 305 THR HXT H N N 306 VAL N N N N 307 VAL CA C N S 308 VAL C C N N 309 VAL O O N N 310 VAL CB C N N 311 VAL CG1 C N N 312 VAL CG2 C N N 313 VAL OXT O N N 314 VAL H H N N 315 VAL H2 H N N 316 VAL HA H N N 317 VAL HB H N N 318 VAL HG11 H N N 319 VAL HG12 H N N 320 VAL HG13 H N N 321 VAL HG21 H N N 322 VAL HG22 H N N 323 VAL HG23 H N N 324 VAL HXT H N N 325 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HIS N CA sing N N 116 HIS N H sing N N 117 HIS N H2 sing N N 118 HIS CA C sing N N 119 HIS CA CB sing N N 120 HIS CA HA sing N N 121 HIS C O doub N N 122 HIS C OXT sing N N 123 HIS CB CG sing N N 124 HIS CB HB2 sing N N 125 HIS CB HB3 sing N N 126 HIS CG ND1 sing Y N 127 HIS CG CD2 doub Y N 128 HIS ND1 CE1 doub Y N 129 HIS ND1 HD1 sing N N 130 HIS CD2 NE2 sing Y N 131 HIS CD2 HD2 sing N N 132 HIS CE1 NE2 sing Y N 133 HIS CE1 HE1 sing N N 134 HIS NE2 HE2 sing N N 135 HIS OXT HXT sing N N 136 HOH O H1 sing N N 137 HOH O H2 sing N N 138 ILE N CA sing N N 139 ILE N H sing N N 140 ILE N H2 sing N N 141 ILE CA C sing N N 142 ILE CA CB sing N N 143 ILE CA HA sing N N 144 ILE C O doub N N 145 ILE C OXT sing N N 146 ILE CB CG1 sing N N 147 ILE CB CG2 sing N N 148 ILE CB HB sing N N 149 ILE CG1 CD1 sing N N 150 ILE CG1 HG12 sing N N 151 ILE CG1 HG13 sing N N 152 ILE CG2 HG21 sing N N 153 ILE CG2 HG22 sing N N 154 ILE CG2 HG23 sing N N 155 ILE CD1 HD11 sing N N 156 ILE CD1 HD12 sing N N 157 ILE CD1 HD13 sing N N 158 ILE OXT HXT sing N N 159 LEU N CA sing N N 160 LEU N H sing N N 161 LEU N H2 sing N N 162 LEU CA C sing N N 163 LEU CA CB sing N N 164 LEU CA HA sing N N 165 LEU C O doub N N 166 LEU C OXT sing N N 167 LEU CB CG sing N N 168 LEU CB HB2 sing N N 169 LEU CB HB3 sing N N 170 LEU CG CD1 sing N N 171 LEU CG CD2 sing N N 172 LEU CG HG sing N N 173 LEU CD1 HD11 sing N N 174 LEU CD1 HD12 sing N N 175 LEU CD1 HD13 sing N N 176 LEU CD2 HD21 sing N N 177 LEU CD2 HD22 sing N N 178 LEU CD2 HD23 sing N N 179 LEU OXT HXT sing N N 180 LYS N CA sing N N 181 LYS N H sing N N 182 LYS N H2 sing N N 183 LYS CA C sing N N 184 LYS CA CB sing N N 185 LYS CA HA sing N N 186 LYS C O doub N N 187 LYS C OXT sing N N 188 LYS CB CG sing N N 189 LYS CB HB2 sing N N 190 LYS CB HB3 sing N N 191 LYS CG CD sing N N 192 LYS CG HG2 sing N N 193 LYS CG HG3 sing N N 194 LYS CD CE sing N N 195 LYS CD HD2 sing N N 196 LYS CD HD3 sing N N 197 LYS CE NZ sing N N 198 LYS CE HE2 sing N N 199 LYS CE HE3 sing N N 200 LYS NZ HZ1 sing N N 201 LYS NZ HZ2 sing N N 202 LYS NZ HZ3 sing N N 203 LYS OXT HXT sing N N 204 MET N CA sing N N 205 MET N H sing N N 206 MET N H2 sing N N 207 MET CA C sing N N 208 MET CA CB sing N N 209 MET CA HA sing N N 210 MET C O doub N N 211 MET C OXT sing N N 212 MET CB CG sing N N 213 MET CB HB2 sing N N 214 MET CB HB3 sing N N 215 MET CG SD sing N N 216 MET CG HG2 sing N N 217 MET CG HG3 sing N N 218 MET SD CE sing N N 219 MET CE HE1 sing N N 220 MET CE HE2 sing N N 221 MET CE HE3 sing N N 222 MET OXT HXT sing N N 223 PHE N CA sing N N 224 PHE N H sing N N 225 PHE N H2 sing N N 226 PHE CA C sing N N 227 PHE CA CB sing N N 228 PHE CA HA sing N N 229 PHE C O doub N N 230 PHE C OXT sing N N 231 PHE CB CG sing N N 232 PHE CB HB2 sing N N 233 PHE CB HB3 sing N N 234 PHE CG CD1 doub Y N 235 PHE CG CD2 sing Y N 236 PHE CD1 CE1 sing Y N 237 PHE CD1 HD1 sing N N 238 PHE CD2 CE2 doub Y N 239 PHE CD2 HD2 sing N N 240 PHE CE1 CZ doub Y N 241 PHE CE1 HE1 sing N N 242 PHE CE2 CZ sing Y N 243 PHE CE2 HE2 sing N N 244 PHE CZ HZ sing N N 245 PHE OXT HXT sing N N 246 PRO N CA sing N N 247 PRO N CD sing N N 248 PRO N H sing N N 249 PRO CA C sing N N 250 PRO CA CB sing N N 251 PRO CA HA sing N N 252 PRO C O doub N N 253 PRO C OXT sing N N 254 PRO CB CG sing N N 255 PRO CB HB2 sing N N 256 PRO CB HB3 sing N N 257 PRO CG CD sing N N 258 PRO CG HG2 sing N N 259 PRO CG HG3 sing N N 260 PRO CD HD2 sing N N 261 PRO CD HD3 sing N N 262 PRO OXT HXT sing N N 263 SER N CA sing N N 264 SER N H sing N N 265 SER N H2 sing N N 266 SER CA C sing N N 267 SER CA CB sing N N 268 SER CA HA sing N N 269 SER C O doub N N 270 SER C OXT sing N N 271 SER CB OG sing N N 272 SER CB HB2 sing N N 273 SER CB HB3 sing N N 274 SER OG HG sing N N 275 SER OXT HXT sing N N 276 THR N CA sing N N 277 THR N H sing N N 278 THR N H2 sing N N 279 THR CA C sing N N 280 THR CA CB sing N N 281 THR CA HA sing N N 282 THR C O doub N N 283 THR C OXT sing N N 284 THR CB OG1 sing N N 285 THR CB CG2 sing N N 286 THR CB HB sing N N 287 THR OG1 HG1 sing N N 288 THR CG2 HG21 sing N N 289 THR CG2 HG22 sing N N 290 THR CG2 HG23 sing N N 291 THR OXT HXT sing N N 292 VAL N CA sing N N 293 VAL N H sing N N 294 VAL N H2 sing N N 295 VAL CA C sing N N 296 VAL CA CB sing N N 297 VAL CA HA sing N N 298 VAL C O doub N N 299 VAL C OXT sing N N 300 VAL CB CG1 sing N N 301 VAL CB CG2 sing N N 302 VAL CB HB sing N N 303 VAL CG1 HG11 sing N N 304 VAL CG1 HG12 sing N N 305 VAL CG1 HG13 sing N N 306 VAL CG2 HG21 sing N N 307 VAL CG2 HG22 sing N N 308 VAL CG2 HG23 sing N N 309 VAL OXT HXT sing N N 310 # _atom_sites.entry_id 1DKZ _atom_sites.fract_transf_matrix[1][1] 0.010593 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.008569 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.026810 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_