HEADER IMMUNOGLOBULIN 14-JUL-98 1DLF TITLE HIGH RESOLUTION CRYSTAL STRUCTURE OF THE FV FRAGMENT FROM AN ANTI- TITLE 2 DANSYL SWITCH VARIANT ANTIBODY IGG2A(S) CRYSTALLIZED AT PH 5.25 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ANTI-DANSYL IMMUNOGLOBULIN IGG2A(S); COMPND 3 CHAIN: L; COMPND 4 FRAGMENT: FV FRAGMENT (VH AND VL DOMAINS); COMPND 5 SYNONYM: ANTI-DANSYL FV FRAGMENT; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: ANTI-DANSYL IMMUNOGLOBULIN IGG2A(S); COMPND 8 CHAIN: H; COMPND 9 FRAGMENT: FV FRAGMENT (VH AND VL DOMAINS); COMPND 10 SYNONYM: ANTI-DANSYL FV FRAGMENT SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 CELL_LINE: HYBRIDOMA; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 8 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 9 ORGANISM_TAXID: 10090; SOURCE 10 CELL_LINE: HYBRIDOMA KEYWDS FV FRAGMENT, IMMUNOGLOBULIN EXPDTA X-RAY DIFFRACTION AUTHOR M.NAKASAKO,H.TAKAHASHI,I.SHIMADA,Y.ARATA REVDAT 3 09-AUG-23 1DLF 1 REMARK SEQADV REVDAT 2 24-FEB-09 1DLF 1 VERSN REVDAT 1 26-JUL-99 1DLF 0 JRNL AUTH M.NAKASAKO,H.TAKAHASHI,N.SHIMBA,I.SHIMADA,Y.ARATA JRNL TITL THE PH-DEPENDENT STRUCTURAL VARIATION OF JRNL TITL 2 COMPLEMENTARITY-DETERMINING REGION H3 IN THE CRYSTAL JRNL TITL 3 STRUCTURES OF THE FV FRAGMENT FROM AN ANTI-DANSYL MONOCLONAL JRNL TITL 4 ANTIBODY. JRNL REF J.MOL.BIOL. V. 291 117 1999 JRNL REFN ISSN 0022-2836 JRNL PMID 10438610 JRNL DOI 10.1006/JMBI.1999.2931 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH H.TAKAHASHI,H.TAMURA,N.SHIMBA,I.SHIMADA,Y.ARATA REMARK 1 TITL ROLE OF THE DOMAIN-DOMAIN INTERACTION IN THE CONSTRUCTION OF REMARK 1 TITL 2 THE ANTIGEN COMBINING SITE. A COMPARATIVE STUDY BY 1H-15N REMARK 1 TITL 3 SHIFT CORRELATION NMR SPECTROSCOPY OF THE FV AND FAB REMARK 1 TITL 4 FRAGMENTS OF ANTI-DANSYL MOUSE MONOCLONAL ANTIBODY REMARK 1 REF J.MOL.BIOL. V. 243 494 1994 REMARK 1 REFN ISSN 0022-2836 REMARK 1 REFERENCE 2 REMARK 1 AUTH H.TAKAHASHI,E.SUZUKI,I.SHIMADA,Y.ARATA REMARK 1 TITL DYNAMICAL STRUCTURE OF THE ANTIBODY COMBINING SITE AS REMARK 1 TITL 2 STUDIED BY 1H-15N SHIFT CORRELATION NMR SPECTROSCOPY REMARK 1 REF BIOCHEMISTRY V. 31 2464 1992 REMARK 1 REFN ISSN 0006-2960 REMARK 1 REFERENCE 3 REMARK 1 AUTH A.ODAKA,J.I.KIM,H.TAKAHASHI,I.SHIMADA,Y.ARATA REMARK 1 TITL ISOTOPE-EDITED NUCLEAR MAGNETIC RESONANCE STUDY OF FV REMARK 1 TITL 2 FRAGMENT OF ANTI-DANSYL MOUSE MONOCLONAL ANTIBODY: REMARK 1 TITL 3 RECOGNITION OF THE DANSYL HAPTEN REMARK 1 REF BIOCHEMISTRY V. 31 10686 1992 REMARK 1 REFN ISSN 0006-2960 REMARK 1 REFERENCE 4 REMARK 1 AUTH H.TAKAHASHI,T.IGARASHI,I.SHIMADA,Y.ARATA REMARK 1 TITL PREPARATION OF THE FV FRAGMENT FROM A SHORT-CHAIN MOUSE REMARK 1 TITL 2 IGG2A ANTI-DANSYL MONOCLONAL ANTIBODY AND USE OF SELECTIVELY REMARK 1 TITL 3 DEUTERATED FV ANALOGUES FOR TWO-DIMENSIONAL 1H NMR ANALYSES REMARK 1 TITL 4 OF THE ANTIGEN-ANTIBODY INTERACTIONS REMARK 1 REF BIOCHEMISTRY V. 30 2840 1991 REMARK 1 REFN ISSN 0006-2960 REMARK 1 REFERENCE 5 REMARK 1 AUTH H.TAKAHASHI,A.ODAKA,S.KAWAMINAMI,C.MATSUNAGA,K.KATO, REMARK 1 AUTH 2 I.SHIMADA,Y.ARATA REMARK 1 TITL MULTINUCLEAR NMR STUDY OF THE STRUCTURE OF THE FV FRAGMENT REMARK 1 TITL 2 OF ANTI-DANSYL MOUSE IGG2A ANTIBODY REMARK 1 REF BIOCHEMISTRY V. 30 6611 1991 REMARK 1 REFN ISSN 0006-2960 REMARK 1 REFERENCE 6 REMARK 1 AUTH T.KIM,I.NAKANO,T.HIGUCHI,M.HIROBE,I.SHIMADA,Y.ARATA REMARK 1 TITL CONFORMATION AND STEREOSELECTIVE REDUCTION OF HAPTEN SIDE REMARK 1 TITL 2 CHAIN IN THE ANTIBODY COMBINING SITE REMARK 1 REF J.AM.CHEM.SOC. V. 113 9392 1991 REMARK 1 REFN ISSN 0002-7863 REMARK 1 REFERENCE 7 REMARK 1 AUTH T.IGARASHI,M.SATO,Y.KATSUBE,K.TAKIO,T.TANAKA,M.NAKANISHI, REMARK 1 AUTH 2 Y.ARATA REMARK 1 TITL STRUCTURE OF A MOUSE IMMUNOGLOBULIN G THAT LACKS THE ENTIRE REMARK 1 TITL 2 CH1 DOMAIN: PROTEIN SEQUENCING AND SMALL-ANGLE X-RAY REMARK 1 TITL 3 SCATTERING STUDIES REMARK 1 REF BIOCHEMISTRY V. 29 5725 1990 REMARK 1 REFN ISSN 0006-2960 REMARK 2 REMARK 2 RESOLUTION. 1.45 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.0 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.45 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 8.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 1000.000 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 1.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 90.8 REMARK 3 NUMBER OF REFLECTIONS : 34689 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.183 REMARK 3 FREE R VALUE : 0.230 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.200 REMARK 3 FREE R VALUE TEST SET COUNT : 3538 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 40 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.45 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.46 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 87.00 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 716 REMARK 3 BIN R VALUE (WORKING SET) : 0.3640 REMARK 3 BIN FREE R VALUE : 0.3740 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 12.10 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 87 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1837 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 20 REMARK 3 SOLVENT ATOMS : 452 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.17 REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 1.054 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 28.29 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.491 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : GAUSS REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PARHCSDX.PRO REMARK 3 PARAMETER FILE 2 : NULL REMARK 3 PARAMETER FILE 3 : NULL REMARK 3 TOPOLOGY FILE 1 : TOPHCSDX.PRO REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: ALL ATOMS IN AN ASYMMETRIC UNIT WERE REMARK 3 REFINED REMARK 4 REMARK 4 1DLF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000172832. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-MAY-98 REMARK 200 TEMPERATURE (KELVIN) : 112 REMARK 200 PH : 5.25 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU ULTRAX 18 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : DOUBLE FOCUSSING MIRROR (PT REMARK 200 COATED AND NI COATED MIRRORS) REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36158 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.450 REMARK 200 RESOLUTION RANGE LOW (A) : 99.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.9 REMARK 200 DATA REDUNDANCY : 8.100 REMARK 200 R MERGE (I) : 0.06700 REMARK 200 R SYM (I) : 0.06700 REMARK 200 FOR THE DATA SET : 35.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.45 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.47 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.4 REMARK 200 DATA REDUNDANCY IN SHELL : 5.30 REMARK 200 R MERGE FOR SHELL (I) : 0.26500 REMARK 200 R SYM FOR SHELL (I) : 0.26500 REMARK 200 FOR SHELL : 8.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MULTIPLE MOLECULAR REMARK 200 REPLACEMENT REMARK 200 SOFTWARE USED: X-PLOR 3.0 REMARK 200 STARTING MODEL: FV PORTION OF FAB' B13I2 (1IGF) REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.01 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 5.25 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.05050 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 26.73200 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 35.36100 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 26.73200 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.05050 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 35.36100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1970 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11060 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -56.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: L, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 THE ANTI-DANSYL FV FRAGMENT RETAINS ITS FULL ANTIGEN REMARK 400 BINDING CAPABILITY. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA H 115 REMARK 465 GLU H 116 REMARK 465 PRO H 117 REMARK 465 ARG H 118 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU H 42 O HOH H 633 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR L 32 66.43 -100.49 REMARK 500 VAL L 51 -49.70 77.54 REMARK 500 TYR H 97 -141.77 50.66 REMARK 500 PRO H 100 48.91 -82.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR H 58 0.07 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 H 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 H 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 H 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 H 503 DBREF 1DLF L 1 108 UNP Q9JL82 Q9JL82_MOUSE 1 113 DBREF 1DLF H 1 115 PIR PC1213 PC1213 20 139 SEQADV 1DLF ASN L 17 UNP Q9JL82 ASP 17 CONFLICT SEQADV 1DLF PHE L 96 UNP Q9JL82 TYR 101 CONFLICT SEQADV 1DLF SER L 100 UNP Q9JL82 GLY 105 CONFLICT SEQADV 1DLF THR H 24 PIR PC1213 ALA 43 CONFLICT SEQADV 1DLF ALA H 49 PIR PC1213 GLY 68 CONFLICT SEQADV 1DLF ASN H 52A PIR PC1213 SER 72 CONFLICT SEQADV 1DLF ARG H 76 PIR PC1213 SER 98 CONFLICT SEQADV 1DLF ARG H 77 PIR PC1213 SER 99 CONFLICT SEQADV 1DLF THR H 82B PIR PC1213 SER 106 CONFLICT SEQADV 1DLF GLY H 94 PIR PC1213 PRO 119 CONFLICT SEQADV 1DLF TYR H 96 PIR PC1213 INSERTION SEQADV 1DLF TYR H 97 PIR PC1213 THR 121 CONFLICT SEQADV 1DLF HIS H 98 PIR PC1213 THR 122 CONFLICT SEQADV 1DLF TYR H 99 PIR PC1213 GLY 123 CONFLICT SEQADV 1DLF PRO H 100 PIR PC1213 ALA 124 CONFLICT SEQRES 1 L 113 ASP VAL VAL MET THR GLN THR PRO LEU SER LEU PRO VAL SEQRES 2 L 113 SER LEU GLY ASN GLN ALA SER ILE SER CYS ARG SER SER SEQRES 3 L 113 GLN SER LEU VAL HIS SER ASN GLY ASN THR TYR LEU HIS SEQRES 4 L 113 TRP TYR LEU GLN LYS PRO GLY GLN SER PRO LYS LEU LEU SEQRES 5 L 113 ILE TYR LYS VAL SER ASN ARG PHE SER GLY VAL PRO ASP SEQRES 6 L 113 ARG PHE SER GLY SER GLY SER GLY THR ASP PHE THR LEU SEQRES 7 L 113 LYS ILE SER ARG VAL GLU ALA GLU ASP LEU GLY VAL TYR SEQRES 8 L 113 PHE CYS SER GLN SER THR HIS VAL PRO PHE THR PHE GLY SEQRES 9 L 113 SER GLY THR LYS LEU GLU ILE LYS ARG SEQRES 1 H 124 GLU VAL LYS LEU GLU GLU SER GLY GLY GLY LEU VAL GLN SEQRES 2 H 124 PRO GLY GLY SER MET LYS LEU SER CYS ALA THR SER GLY SEQRES 3 H 124 PHE THR PHE SER ASP ALA TRP MET ASP TRP VAL ARG GLN SEQRES 4 H 124 SER PRO GLU LYS GLY LEU GLU TRP VAL ALA GLU ILE ARG SEQRES 5 H 124 ASN LYS ALA ASN ASN HIS ALA THR TYR TYR ALA GLU SER SEQRES 6 H 124 VAL LYS GLY ARG PHE THR ILE SER ARG ASP ASP SER LYS SEQRES 7 H 124 ARG ARG VAL TYR LEU GLN MET ASN THR LEU ARG ALA GLU SEQRES 8 H 124 ASP THR GLY ILE TYR TYR CYS THR GLY ILE TYR TYR HIS SEQRES 9 H 124 TYR PRO TRP PHE ALA TYR TRP GLY GLN GLY THR LEU VAL SEQRES 10 H 124 THR VAL SER ALA GLU PRO ARG HET SO4 H 500 5 HET SO4 H 501 5 HET SO4 H 502 5 HET SO4 H 503 5 HETNAM SO4 SULFATE ION FORMUL 3 SO4 4(O4 S 2-) FORMUL 7 HOH *452(H2 O) HELIX 1 1 ALA L 80 ASP L 82 5 3 HELIX 2 2 PHE H 29 ASP H 31 5 3 HELIX 3 3 LYS H 52B ASN H 53 5 3 HELIX 4 4 ALA H 84 ASP H 86 5 3 SHEET 1 A 4 MET L 4 THR L 7 0 SHEET 2 A 4 ALA L 19 SER L 25 -1 N ARG L 24 O THR L 5 SHEET 3 A 4 ASP L 70 ILE L 75 -1 N ILE L 75 O ALA L 19 SHEET 4 A 4 PHE L 62 SER L 67 -1 N SER L 67 O ASP L 70 SHEET 1 B 5 SER L 10 VAL L 13 0 SHEET 2 B 5 THR L 102 ILE L 106 1 N LYS L 103 O LEU L 11 SHEET 3 B 5 GLY L 84 GLN L 90 -1 N TYR L 86 O THR L 102 SHEET 4 B 5 LEU L 33 GLN L 38 -1 N GLN L 38 O VAL L 85 SHEET 5 B 5 LYS L 45 ILE L 48 -1 N ILE L 48 O TRP L 35 SHEET 1 C 4 LYS H 3 SER H 7 0 SHEET 2 C 4 MET H 18 SER H 25 -1 N SER H 25 O LYS H 3 SHEET 3 C 4 ARG H 77 MET H 82 -1 N MET H 82 O MET H 18 SHEET 4 C 4 PHE H 67 ASP H 72 -1 N ASP H 72 O ARG H 77 SHEET 1 D 5 THR H 109 VAL H 111 0 SHEET 2 D 5 GLY H 88 ILE H 95 -1 N TYR H 90 O THR H 109 SHEET 3 D 5 TRP H 33 SER H 40 -1 N GLN H 39 O ILE H 89 SHEET 4 D 5 GLY H 44 ILE H 51 -1 N ILE H 51 O MET H 34 SHEET 5 D 5 THR H 57 TYR H 59 -1 N TYR H 58 O GLU H 50 SSBOND 1 CYS L 23 CYS L 88 1555 1555 2.05 SSBOND 2 CYS H 22 CYS H 92 1555 1555 2.03 CISPEP 1 THR L 7 PRO L 8 0 -0.58 CISPEP 2 VAL L 94 PRO L 95 0 6.81 SITE 1 AC1 8 PHE H 27 THR H 28 TYR H 97 HOH H 570 SITE 2 AC1 8 HOH H 618 HOH H 652 HOH H 682 ARG L 24 SITE 1 AC2 6 LYS H 75 ARG H 77 TYR H 79 HOH H 608 SITE 2 AC2 6 HOH H 614 SER L 26 SITE 1 AC3 9 HOH H 694 HIS L 93 LYS L 103 GLU L 105 SITE 2 AC3 9 HOH L 117 HOH L 128 HOH L 139 HOH L 214 SITE 3 AC3 9 HOH L 256 SITE 1 AC4 9 PHE H 27 PHE H 29 SER H 30 ARG H 76 SITE 2 AC4 9 HOH H 599 HOH H 609 HOH H 632 HOH H 663 SITE 3 AC4 9 HOH L 283 CRYST1 56.101 70.722 53.464 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017825 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014140 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018704 0.00000