HEADER TRANSFERASE 09-DEC-99 1DLG TITLE CRYSTAL STRUCTURE OF THE C115S ENTEROBACTER CLOACAE MURA IN THE UN- TITLE 2 LIGANDED STATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: UDP-N-ACETYLGLUCOSAMINE ENOLPYRUVYL TRANSFERASE MURA; COMPND 3 CHAIN: A, B; COMPND 4 EC: 2.5.1.7; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROBACTER CLOACAE; SOURCE 3 ORGANISM_TAXID: 550; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS INSIDE-OUT ALPHA/BETA BARREL, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR E.SCHONBRUNN,S.ESCHENBURG,F.KREKEL,K.LUGER,N.AMRHEIN REVDAT 9 09-OCT-24 1DLG 1 REMARK REVDAT 8 03-NOV-21 1DLG 1 REMARK SEQADV LINK REVDAT 7 16-NOV-11 1DLG 1 HETATM REVDAT 6 27-JUL-11 1DLG 1 HETNAM HETSYN REMARK REVDAT 5 13-JUL-11 1DLG 1 VERSN REVDAT 4 09-MAR-11 1DLG 1 REMARK REVDAT 3 29-DEC-09 1DLG 1 HET REVDAT 2 24-FEB-09 1DLG 1 VERSN REVDAT 1 12-APR-00 1DLG 0 JRNL AUTH E.SCHONBRUNN,S.ESCHENBURG,F.KREKEL,K.LUGER,N.AMRHEIN JRNL TITL ROLE OF THE LOOP CONTAINING RESIDUE 115 IN THE INDUCED-FIT JRNL TITL 2 MECHANISM OF THE BACTERIAL CELL WALL BIOSYNTHETIC ENZYME JRNL TITL 3 MURA. JRNL REF BIOCHEMISTRY V. 39 2164 2000 JRNL REFN ISSN 0006-2960 JRNL PMID 10694381 JRNL DOI 10.1021/BI991091J REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH S.ESCHENBURG,E.SCHONBRUNN REMARK 1 TITL COMPARATIVE X-RAY ANALYSIS OF THE UN-LIGANDED FOSFOMYCIN REMARK 1 TITL 2 TARGET MURA REMARK 1 REF TO BE PUBLISHED REMARK 1 REFN REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 14.97 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 86055 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.173 REMARK 3 FREE R VALUE : 0.197 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2595 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.004 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.02 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.40 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 13516 REMARK 3 BIN R VALUE (WORKING SET) : 0.2050 REMARK 3 BIN FREE R VALUE : 0.2460 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 3.10 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 435 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.012 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6286 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 66 REMARK 3 SOLVENT ATOMS : 1016 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 12.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.56000 REMARK 3 B22 (A**2) : 1.99000 REMARK 3 B33 (A**2) : -4.55000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.69000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.18 REMARK 3 ESD FROM SIGMAA (A) : 0.13 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.22 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.18 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.014 REMARK 3 BOND ANGLES (DEGREES) : 1.800 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 24.70 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.340 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: USED 4 ROUND OF SIMULATED REMARK 3 ANNEALING/MINIMIZATION/BINDIVIDUAL REFINEMENT BY CNS REMARK 4 REMARK 4 1DLG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-JAN-00. REMARK 100 THE DEPOSITION ID IS D_1000010183. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-NOV-98 REMARK 200 TEMPERATURE (KELVIN) : 120 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM1A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8729 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 86085 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 14.970 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 7.000 REMARK 200 R MERGE (I) : 0.03300 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 35.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.93 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.9 REMARK 200 DATA REDUNDANCY IN SHELL : 2.00 REMARK 200 R MERGE FOR SHELL (I) : 0.11900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.95 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.15 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.4-0.8 M SODIUM/POTASSIUM PHOSPHATE REMARK 280 INCLUDING 20-40 MM CYCLOHEXYLAMMONIUM PHOSPHATE, PH 6.5, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 19K, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 43.34250 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 77.76600 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 43.34250 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 77.76600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE ASYMMETRIC UNIT CONTAINS A HOMODIMER (MONOMER A AND REMARK 300 MONOMER B) REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 14440 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 57440 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -117.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 3 1.000000 0.000000 0.000000 -43.34250 REMARK 350 BIOMT2 3 0.000000 1.000000 0.000000 77.76600 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 -1.000000 0.000000 0.000000 43.34250 REMARK 350 BIOMT2 4 0.000000 1.000000 0.000000 77.76600 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A1201 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1205 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1210 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 694 LIES ON A SPECIAL POSITION. REMARK 375 HOH B1200 LIES ON A SPECIAL POSITION. REMARK 375 HOH B1202 LIES ON A SPECIAL POSITION. REMARK 375 HOH B1203 LIES ON A SPECIAL POSITION. REMARK 375 HOH B1206 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 536 O HOH B 1215 2.01 REMARK 500 O HOH B 621 O HOH B 1216 2.15 REMARK 500 O VAL B 225 O HOH B 497 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 78 17.77 -143.66 REMARK 500 ASN A 330 49.79 -145.91 REMARK 500 ARG A 331 50.87 -107.30 REMARK 500 SER A 349 -126.79 56.04 REMARK 500 ARG A 401 68.95 37.36 REMARK 500 GLU B 140 134.83 -39.79 REMARK 500 SER B 349 -123.28 57.41 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 1500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 B 1501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 1502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 1503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 B 1504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 B 1506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 B 1507 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 B 1508 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 B 1509 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HAI B 1420 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HAI B 1422 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HAI A 1424 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1NAW RELATED DB: PDB REMARK 900 1NAW IS UN-LIGANDED WILD-TYPE E. CLOACAE MURA DBREF 1DLG A 1 419 UNP P33038 MURA_ENTCL 1 419 DBREF 1DLG B 1 419 UNP P33038 MURA_ENTCL 1 419 SEQADV 1DLG IAS A 67 UNP P33038 ASN 67 CONFLICT SEQADV 1DLG SER A 115 UNP P33038 CYS 115 ENGINEERED MUTATION SEQADV 1DLG IAS B 67 UNP P33038 ASN 67 CONFLICT SEQADV 1DLG SER B 115 UNP P33038 CYS 115 ENGINEERED MUTATION SEQRES 1 A 419 MET ASP LYS PHE ARG VAL GLN GLY PRO THR ARG LEU GLN SEQRES 2 A 419 GLY GLU VAL THR ILE SER GLY ALA LYS ASN ALA ALA LEU SEQRES 3 A 419 PRO ILE LEU PHE ALA ALA LEU LEU ALA GLU GLU PRO VAL SEQRES 4 A 419 GLU ILE GLN ASN VAL PRO LYS LEU LYS ASP ILE ASP THR SEQRES 5 A 419 THR MET LYS LEU LEU THR GLN LEU GLY THR LYS VAL GLU SEQRES 6 A 419 ARG IAS GLY SER VAL TRP ILE ASP ALA SER ASN VAL ASN SEQRES 7 A 419 ASN PHE SER ALA PRO TYR ASP LEU VAL LYS THR MET ARG SEQRES 8 A 419 ALA SER ILE TRP ALA LEU GLY PRO LEU VAL ALA ARG PHE SEQRES 9 A 419 GLY GLN GLY GLN VAL SER LEU PRO GLY GLY SER ALA ILE SEQRES 10 A 419 GLY ALA ARG PRO VAL ASP LEU HIS ILE PHE GLY LEU GLU SEQRES 11 A 419 LYS LEU GLY ALA GLU ILE LYS LEU GLU GLU GLY TYR VAL SEQRES 12 A 419 LYS ALA SER VAL ASN GLY ARG LEU LYS GLY ALA HIS ILE SEQRES 13 A 419 VAL MET ASP LYS VAL SER VAL GLY ALA THR VAL THR ILE SEQRES 14 A 419 MET SER ALA ALA THR LEU ALA GLU GLY THR THR ILE ILE SEQRES 15 A 419 GLU ASN ALA ALA ARG GLU PRO GLU ILE VAL ASP THR ALA SEQRES 16 A 419 ASN PHE LEU VAL ALA LEU GLY ALA LYS ILE SER GLY GLN SEQRES 17 A 419 GLY THR ASP ARG ILE THR ILE GLU GLY VAL GLU ARG LEU SEQRES 18 A 419 GLY GLY GLY VAL TYR ARG VAL LEU PRO ASP ARG ILE GLU SEQRES 19 A 419 THR GLY THR PHE LEU VAL ALA ALA ALA ILE SER GLY GLY SEQRES 20 A 419 LYS ILE VAL CYS ARG ASN ALA GLN PRO ASP THR LEU ASP SEQRES 21 A 419 ALA VAL LEU ALA LYS LEU ARG GLU ALA GLY ALA ASP ILE SEQRES 22 A 419 GLU THR GLY GLU ASP TRP ILE SER LEU ASP MET HIS GLY SEQRES 23 A 419 LYS ARG PRO LYS ALA VAL THR VAL ARG THR ALA PRO HIS SEQRES 24 A 419 PRO ALA PHE PRO THR ASP MET GLN ALA GLN PHE THR LEU SEQRES 25 A 419 LEU ASN LEU VAL ALA GLU GLY THR GLY VAL ILE THR GLU SEQRES 26 A 419 THR ILE PHE GLU ASN ARG PHE MET HIS VAL PRO GLU LEU SEQRES 27 A 419 ILE ARG MET GLY ALA HIS ALA GLU ILE GLU SER ASN THR SEQRES 28 A 419 VAL ILE CYS HIS GLY VAL GLU LYS LEU SER GLY ALA GLN SEQRES 29 A 419 VAL MET ALA THR ASP LEU ARG ALA SER ALA SER LEU VAL SEQRES 30 A 419 LEU ALA GLY CYS ILE ALA GLU GLY THR THR VAL VAL ASP SEQRES 31 A 419 ARG ILE TYR HIS ILE ASP ARG GLY TYR GLU ARG ILE GLU SEQRES 32 A 419 ASP LYS LEU ARG ALA LEU GLY ALA ASN ILE GLU ARG VAL SEQRES 33 A 419 LYS GLY GLU SEQRES 1 B 419 MET ASP LYS PHE ARG VAL GLN GLY PRO THR ARG LEU GLN SEQRES 2 B 419 GLY GLU VAL THR ILE SER GLY ALA LYS ASN ALA ALA LEU SEQRES 3 B 419 PRO ILE LEU PHE ALA ALA LEU LEU ALA GLU GLU PRO VAL SEQRES 4 B 419 GLU ILE GLN ASN VAL PRO LYS LEU LYS ASP ILE ASP THR SEQRES 5 B 419 THR MET LYS LEU LEU THR GLN LEU GLY THR LYS VAL GLU SEQRES 6 B 419 ARG IAS GLY SER VAL TRP ILE ASP ALA SER ASN VAL ASN SEQRES 7 B 419 ASN PHE SER ALA PRO TYR ASP LEU VAL LYS THR MET ARG SEQRES 8 B 419 ALA SER ILE TRP ALA LEU GLY PRO LEU VAL ALA ARG PHE SEQRES 9 B 419 GLY GLN GLY GLN VAL SER LEU PRO GLY GLY SER ALA ILE SEQRES 10 B 419 GLY ALA ARG PRO VAL ASP LEU HIS ILE PHE GLY LEU GLU SEQRES 11 B 419 LYS LEU GLY ALA GLU ILE LYS LEU GLU GLU GLY TYR VAL SEQRES 12 B 419 LYS ALA SER VAL ASN GLY ARG LEU LYS GLY ALA HIS ILE SEQRES 13 B 419 VAL MET ASP LYS VAL SER VAL GLY ALA THR VAL THR ILE SEQRES 14 B 419 MET SER ALA ALA THR LEU ALA GLU GLY THR THR ILE ILE SEQRES 15 B 419 GLU ASN ALA ALA ARG GLU PRO GLU ILE VAL ASP THR ALA SEQRES 16 B 419 ASN PHE LEU VAL ALA LEU GLY ALA LYS ILE SER GLY GLN SEQRES 17 B 419 GLY THR ASP ARG ILE THR ILE GLU GLY VAL GLU ARG LEU SEQRES 18 B 419 GLY GLY GLY VAL TYR ARG VAL LEU PRO ASP ARG ILE GLU SEQRES 19 B 419 THR GLY THR PHE LEU VAL ALA ALA ALA ILE SER GLY GLY SEQRES 20 B 419 LYS ILE VAL CYS ARG ASN ALA GLN PRO ASP THR LEU ASP SEQRES 21 B 419 ALA VAL LEU ALA LYS LEU ARG GLU ALA GLY ALA ASP ILE SEQRES 22 B 419 GLU THR GLY GLU ASP TRP ILE SER LEU ASP MET HIS GLY SEQRES 23 B 419 LYS ARG PRO LYS ALA VAL THR VAL ARG THR ALA PRO HIS SEQRES 24 B 419 PRO ALA PHE PRO THR ASP MET GLN ALA GLN PHE THR LEU SEQRES 25 B 419 LEU ASN LEU VAL ALA GLU GLY THR GLY VAL ILE THR GLU SEQRES 26 B 419 THR ILE PHE GLU ASN ARG PHE MET HIS VAL PRO GLU LEU SEQRES 27 B 419 ILE ARG MET GLY ALA HIS ALA GLU ILE GLU SER ASN THR SEQRES 28 B 419 VAL ILE CYS HIS GLY VAL GLU LYS LEU SER GLY ALA GLN SEQRES 29 B 419 VAL MET ALA THR ASP LEU ARG ALA SER ALA SER LEU VAL SEQRES 30 B 419 LEU ALA GLY CYS ILE ALA GLU GLY THR THR VAL VAL ASP SEQRES 31 B 419 ARG ILE TYR HIS ILE ASP ARG GLY TYR GLU ARG ILE GLU SEQRES 32 B 419 ASP LYS LEU ARG ALA LEU GLY ALA ASN ILE GLU ARG VAL SEQRES 33 B 419 LYS GLY GLU HET IAS A 67 8 HET IAS B 67 8 HET PO4 A1500 5 HET PO4 A1502 5 HET PO4 A1503 5 HET HAI A1424 7 HET PO4 B1501 5 HET PO4 B1504 5 HET PO4 B1506 5 HET PO4 B1507 5 HET PO4 B1508 5 HET PO4 B1509 5 HET HAI B1420 7 HET HAI B1422 7 HETNAM IAS BETA-L-ASPARTIC ACID HETNAM PO4 PHOSPHATE ION HETNAM HAI CYCLOHEXYLAMMONIUM ION HETSYN IAS L-ASPARTIC ACID FORMUL 1 IAS 2(C4 H7 N O4) FORMUL 3 PO4 9(O4 P 3-) FORMUL 6 HAI 3(C6 H14 N 1+) FORMUL 15 HOH *1016(H2 O) HELIX 1 1 ALA A 21 ALA A 32 1 12 HELIX 2 2 LEU A 47 LEU A 60 1 14 HELIX 3 3 PRO A 83 LYS A 88 1 6 HELIX 4 4 MET A 90 TRP A 95 5 6 HELIX 5 5 ALA A 96 GLY A 105 1 10 HELIX 6 6 VAL A 122 LEU A 132 1 11 HELIX 7 7 SER A 162 THR A 174 1 13 HELIX 8 8 GLU A 188 LEU A 201 1 14 HELIX 9 9 ASP A 231 ILE A 244 1 14 HELIX 10 10 GLN A 255 THR A 258 5 4 HELIX 11 11 LEU A 259 ALA A 269 1 11 HELIX 12 12 PRO A 303 ASP A 305 5 3 HELIX 13 13 MET A 306 VAL A 316 1 11 HELIX 14 14 MET A 333 MET A 341 1 9 HELIX 15 15 ASP A 369 ALA A 383 1 15 HELIX 16 16 ILE A 392 TYR A 399 1 8 HELIX 17 17 ARG A 401 ALA A 408 1 8 HELIX 18 18 ALA B 21 ALA B 32 1 12 HELIX 19 19 LEU B 47 LEU B 60 1 14 HELIX 20 20 PRO B 83 LYS B 88 1 6 HELIX 21 21 MET B 90 TRP B 95 5 6 HELIX 22 22 ALA B 96 GLY B 105 1 10 HELIX 23 23 VAL B 122 LEU B 132 1 11 HELIX 24 24 SER B 162 THR B 174 1 13 HELIX 25 25 GLU B 188 LEU B 201 1 14 HELIX 26 26 ASP B 231 ILE B 244 1 14 HELIX 27 27 GLN B 255 THR B 258 5 4 HELIX 28 28 LEU B 259 ALA B 269 1 11 HELIX 29 29 PRO B 303 ASP B 305 5 3 HELIX 30 30 MET B 306 VAL B 316 1 11 HELIX 31 31 HIS B 334 ARG B 340 1 7 HELIX 32 32 ASP B 369 ALA B 383 1 15 HELIX 33 33 ILE B 392 TYR B 399 1 8 HELIX 34 34 ARG B 401 LEU B 409 1 9 SHEET 1 A 4 GLN A 364 VAL A 365 0 SHEET 2 A 4 GLY A 385 VAL A 389 1 O VAL A 388 N VAL A 365 SHEET 3 A 4 ASP A 2 GLY A 8 -1 O PHE A 4 N VAL A 389 SHEET 4 A 4 ASN A 412 LYS A 417 -1 O ASN A 412 N GLN A 7 SHEET 1 B 4 GLN A 13 THR A 17 0 SHEET 2 B 4 LYS A 248 ARG A 252 1 O LYS A 248 N GLY A 14 SHEET 3 B 4 TRP A 279 ASP A 283 -1 O ILE A 280 N CYS A 251 SHEET 4 B 4 ASP A 272 THR A 275 -1 N ASP A 272 O ASP A 283 SHEET 1 C 4 LYS A 63 GLU A 65 0 SHEET 2 C 4 VAL A 70 ASP A 73 -1 N TRP A 71 O GLU A 65 SHEET 3 C 4 VAL A 39 GLN A 42 -1 O VAL A 39 N ILE A 72 SHEET 4 C 4 GLY A 224 ARG A 227 1 O GLY A 224 N GLU A 40 SHEET 1 D 4 SER A 81 ALA A 82 0 SHEET 2 D 4 GLN A 106 SER A 110 1 O GLN A 108 N ALA A 82 SHEET 3 D 4 TYR A 142 SER A 146 -1 O VAL A 143 N VAL A 109 SHEET 4 D 4 GLU A 135 GLU A 139 -1 N GLU A 135 O SER A 146 SHEET 1 E 4 HIS A 155 VAL A 157 0 SHEET 2 E 4 THR A 179 GLU A 183 1 O ILE A 181 N ILE A 156 SHEET 3 E 4 ARG A 212 GLU A 216 -1 O ILE A 213 N ILE A 182 SHEET 4 E 4 LYS A 204 SER A 206 -1 O LYS A 204 N GLU A 216 SHEET 1 F 4 VAL A 294 ARG A 295 0 SHEET 2 F 4 THR A 320 THR A 324 1 O VAL A 322 N VAL A 294 SHEET 3 F 4 THR A 351 HIS A 355 -1 O VAL A 352 N ILE A 323 SHEET 4 F 4 HIS A 344 GLU A 348 -1 O HIS A 344 N HIS A 355 SHEET 1 G 4 GLN B 364 MET B 366 0 SHEET 2 G 4 GLY B 385 ASP B 390 1 O VAL B 388 N VAL B 365 SHEET 3 G 4 LYS B 3 GLY B 8 -1 O PHE B 4 N VAL B 389 SHEET 4 G 4 ASN B 412 VAL B 416 -1 O ASN B 412 N GLN B 7 SHEET 1 H 4 GLN B 13 THR B 17 0 SHEET 2 H 4 LYS B 248 ARG B 252 1 O LYS B 248 N GLY B 14 SHEET 3 H 4 TRP B 279 ASP B 283 -1 O ILE B 280 N CYS B 251 SHEET 4 H 4 ASP B 272 THR B 275 -1 N ASP B 272 O ASP B 283 SHEET 1 I 4 LYS B 63 GLU B 65 0 SHEET 2 I 4 VAL B 70 ASP B 73 -1 N TRP B 71 O GLU B 65 SHEET 3 I 4 VAL B 39 GLN B 42 -1 N VAL B 39 O ILE B 72 SHEET 4 I 4 GLY B 224 ARG B 227 1 O GLY B 224 N GLU B 40 SHEET 1 J 4 SER B 81 ALA B 82 0 SHEET 2 J 4 GLN B 106 SER B 110 1 O GLN B 108 N ALA B 82 SHEET 3 J 4 TYR B 142 SER B 146 -1 N VAL B 143 O VAL B 109 SHEET 4 J 4 GLU B 135 GLU B 139 -1 N GLU B 135 O SER B 146 SHEET 1 K 4 HIS B 155 VAL B 157 0 SHEET 2 K 4 THR B 179 GLU B 183 1 O ILE B 181 N ILE B 156 SHEET 3 K 4 ARG B 212 GLU B 216 -1 O ILE B 213 N ILE B 182 SHEET 4 K 4 LYS B 204 SER B 206 -1 O LYS B 204 N GLU B 216 SHEET 1 L 4 VAL B 294 THR B 296 0 SHEET 2 L 4 THR B 320 GLU B 325 1 O VAL B 322 N VAL B 294 SHEET 3 L 4 THR B 351 HIS B 355 -1 O VAL B 352 N ILE B 323 SHEET 4 L 4 HIS B 344 GLU B 348 -1 O HIS B 344 N HIS B 355 LINK C ARG A 66 N IAS A 67 1555 1555 1.33 LINK CG IAS A 67 N GLY A 68 1555 1555 1.33 LINK C ARG B 66 N IAS B 67 1555 1555 1.33 LINK CG IAS B 67 N GLY B 68 1555 1555 1.33 CISPEP 1 GLY A 8 PRO A 9 0 0.14 CISPEP 2 HIS A 299 PRO A 300 0 1.00 CISPEP 3 GLY B 8 PRO B 9 0 0.28 CISPEP 4 HIS B 299 PRO B 300 0 1.06 SITE 1 AC1 4 GLU A 135 LYS A 137 LYS A 144 HAI A1424 SITE 1 AC2 6 ARG A 252 ASP A 278 HOH A 658 ARG B 252 SITE 2 AC2 6 ASN B 253 HAI B1420 SITE 1 AC3 8 ARG A 401 GLU A 403 ASP A 404 ARG A 407 SITE 2 AC3 8 ARG A 415 HOH A 695 HOH A 917 HOH A 984 SITE 1 AC4 5 SER A 162 VAL A 163 GLY A 164 HOH A 460 SITE 2 AC4 5 HOH A 749 SITE 1 AC5 6 ASN B 23 ASP B 305 ARG B 371 HOH B 454 SITE 2 AC5 6 HOH B 728 HOH B 980 SITE 1 AC6 6 GLY A 118 ALA A 119 ALA B 119 ASP B 159 SITE 2 AC6 6 LYS B 160 HOH B1082 SITE 1 AC7 3 ALA B 92 TRP B 95 HOH B 520 SITE 1 AC8 4 GLY B 319 THR B 320 HIS B 355 HOH B 589 SITE 1 AC9 6 HOH A 887 TYR B 393 HIS B 394 ARG B 397 SITE 2 AC9 6 HOH B 477 HOH B 891 SITE 1 BC1 5 VAL A 250 TRP A 279 TRP B 279 HOH B 552 SITE 2 BC1 5 PO4 B1501 SITE 1 BC2 6 VAL A 250 GLU A 274 SER A 281 VAL B 250 SITE 2 BC2 6 GLU B 274 SER B 281 SITE 1 BC3 5 PHE A 80 GLU A 135 LYS A 144 ASN A 148 SITE 2 BC3 5 PO4 A1500 CRYST1 86.685 155.532 83.820 90.00 91.82 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011536 0.000000 0.000367 0.00000 SCALE2 0.000000 0.006430 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011936 0.00000