data_1DMB # _entry.id 1DMB # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.385 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1DMB pdb_00001dmb 10.2210/pdb1dmb/pdb WWPDB D_1000172838 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1993-10-31 2 'Structure model' 1 1 2008-03-24 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2019-07-17 5 'Structure model' 1 4 2019-08-14 6 'Structure model' 2 0 2020-07-29 7 'Structure model' 2 1 2024-02-07 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 6 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' Other 5 4 'Structure model' 'Refinement description' 6 5 'Structure model' 'Data collection' 7 5 'Structure model' 'Refinement description' 8 6 'Structure model' 'Atomic model' 9 6 'Structure model' 'Data collection' 10 6 'Structure model' 'Derived calculations' 11 6 'Structure model' 'Non-polymer description' 12 6 'Structure model' 'Structure summary' 13 7 'Structure model' 'Data collection' 14 7 'Structure model' 'Database references' 15 7 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' pdbx_database_status 2 4 'Structure model' software 3 5 'Structure model' software 4 6 'Structure model' atom_site 5 6 'Structure model' chem_comp 6 6 'Structure model' entity 7 6 'Structure model' entity_name_com 8 6 'Structure model' pdbx_branch_scheme 9 6 'Structure model' pdbx_chem_comp_identifier 10 6 'Structure model' pdbx_entity_branch 11 6 'Structure model' pdbx_entity_branch_descriptor 12 6 'Structure model' pdbx_entity_branch_link 13 6 'Structure model' pdbx_entity_branch_list 14 6 'Structure model' pdbx_entity_nonpoly 15 6 'Structure model' pdbx_molecule_features 16 6 'Structure model' pdbx_nonpoly_scheme 17 6 'Structure model' struct_conn 18 6 'Structure model' struct_site 19 6 'Structure model' struct_site_gen 20 7 'Structure model' chem_comp 21 7 'Structure model' chem_comp_atom 22 7 'Structure model' chem_comp_bond 23 7 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_pdbx_database_status.process_site' 2 4 'Structure model' '_software.name' 3 5 'Structure model' '_software.name' 4 6 'Structure model' '_atom_site.B_iso_or_equiv' 5 6 'Structure model' '_atom_site.Cartn_x' 6 6 'Structure model' '_atom_site.Cartn_y' 7 6 'Structure model' '_atom_site.Cartn_z' 8 6 'Structure model' '_atom_site.auth_asym_id' 9 6 'Structure model' '_atom_site.auth_atom_id' 10 6 'Structure model' '_atom_site.auth_comp_id' 11 6 'Structure model' '_atom_site.auth_seq_id' 12 6 'Structure model' '_atom_site.label_atom_id' 13 6 'Structure model' '_atom_site.label_comp_id' 14 6 'Structure model' '_atom_site.type_symbol' 15 6 'Structure model' '_chem_comp.formula' 16 6 'Structure model' '_chem_comp.formula_weight' 17 6 'Structure model' '_chem_comp.id' 18 6 'Structure model' '_chem_comp.name' 19 6 'Structure model' '_chem_comp.pdbx_synonyms' 20 6 'Structure model' '_chem_comp.type' 21 6 'Structure model' '_entity.formula_weight' 22 6 'Structure model' '_entity.pdbx_description' 23 6 'Structure model' '_entity.type' 24 7 'Structure model' '_chem_comp.pdbx_synonyms' 25 7 'Structure model' '_database_2.pdbx_DOI' 26 7 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1DMB _pdbx_database_status.recvd_initial_deposition_date 1993-06-10 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Sharff, A.J.' 1 'Quiocho, F.A.' 2 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Refined 1.8-A structure reveals the mode of binding of beta-cyclodextrin to the maltodextrin binding protein.' Biochemistry 32 10553 10559 1993 BICHAW US 0006-2960 0033 ? 8399200 10.1021/bi00091a004 1 ;Crystallographic Evidence of a Large Ligand-Induced Hinge-Twist Motion between the Two Domains of the Maltodextrin Binding Protein Involved in Active Transport and Chemotaxis ; Biochemistry 31 10657 ? 1992 BICHAW US 0006-2960 0033 ? ? ? 2 ;The 2.3 Angstroms Resolution Structure of the Maltose-or Maltodextrin-Binding Protein, a Primary Receptor of Bacterial Active Transport and Chemotaxis ; J.Biol.Chem. 266 5202 ? 1991 JBCHA3 US 0021-9258 0071 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Sharff, A.J.' 1 ? primary 'Rodseth, L.E.' 2 ? primary 'Quiocho, F.A.' 3 ? 1 'Sharff, A.J.' 4 ? 1 'Rodseth, L.E.' 5 ? 1 'Spurlino, J.C.' 6 ? 1 'Quiocho, F.A.' 7 ? 2 'Spurlino, J.C.' 8 ? 2 'Lu, G.-Y.' 9 ? 2 'Quiocho, F.A.' 10 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'D-MALTODEXTRIN BINDING PROTEIN' 40753.152 1 ? ? ? ? 2 branched man 'Cycloheptakis-(1-4)-(alpha-D-glucopyranose)' 1153.001 1 ? ? ? ? 3 water nat water 18.015 135 ? ? ? ? # _entity_name_com.entity_id 2 _entity_name_com.name beta-cyclodextrin # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;KIEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEIT PDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPL IAADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTSKV NYGVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDKPLGAVALKSYEEELAKDPRIAAT MENAQKGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDEALKDAQTRITK ; _entity_poly.pdbx_seq_one_letter_code_can ;KIEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEIT PDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPL IAADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTSKV NYGVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDKPLGAVALKSYEEELAKDPRIAAT MENAQKGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDEALKDAQTRITK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LYS n 1 2 ILE n 1 3 GLU n 1 4 GLU n 1 5 GLY n 1 6 LYS n 1 7 LEU n 1 8 VAL n 1 9 ILE n 1 10 TRP n 1 11 ILE n 1 12 ASN n 1 13 GLY n 1 14 ASP n 1 15 LYS n 1 16 GLY n 1 17 TYR n 1 18 ASN n 1 19 GLY n 1 20 LEU n 1 21 ALA n 1 22 GLU n 1 23 VAL n 1 24 GLY n 1 25 LYS n 1 26 LYS n 1 27 PHE n 1 28 GLU n 1 29 LYS n 1 30 ASP n 1 31 THR n 1 32 GLY n 1 33 ILE n 1 34 LYS n 1 35 VAL n 1 36 THR n 1 37 VAL n 1 38 GLU n 1 39 HIS n 1 40 PRO n 1 41 ASP n 1 42 LYS n 1 43 LEU n 1 44 GLU n 1 45 GLU n 1 46 LYS n 1 47 PHE n 1 48 PRO n 1 49 GLN n 1 50 VAL n 1 51 ALA n 1 52 ALA n 1 53 THR n 1 54 GLY n 1 55 ASP n 1 56 GLY n 1 57 PRO n 1 58 ASP n 1 59 ILE n 1 60 ILE n 1 61 PHE n 1 62 TRP n 1 63 ALA n 1 64 HIS n 1 65 ASP n 1 66 ARG n 1 67 PHE n 1 68 GLY n 1 69 GLY n 1 70 TYR n 1 71 ALA n 1 72 GLN n 1 73 SER n 1 74 GLY n 1 75 LEU n 1 76 LEU n 1 77 ALA n 1 78 GLU n 1 79 ILE n 1 80 THR n 1 81 PRO n 1 82 ASP n 1 83 LYS n 1 84 ALA n 1 85 PHE n 1 86 GLN n 1 87 ASP n 1 88 LYS n 1 89 LEU n 1 90 TYR n 1 91 PRO n 1 92 PHE n 1 93 THR n 1 94 TRP n 1 95 ASP n 1 96 ALA n 1 97 VAL n 1 98 ARG n 1 99 TYR n 1 100 ASN n 1 101 GLY n 1 102 LYS n 1 103 LEU n 1 104 ILE n 1 105 ALA n 1 106 TYR n 1 107 PRO n 1 108 ILE n 1 109 ALA n 1 110 VAL n 1 111 GLU n 1 112 ALA n 1 113 LEU n 1 114 SER n 1 115 LEU n 1 116 ILE n 1 117 TYR n 1 118 ASN n 1 119 LYS n 1 120 ASP n 1 121 LEU n 1 122 LEU n 1 123 PRO n 1 124 ASN n 1 125 PRO n 1 126 PRO n 1 127 LYS n 1 128 THR n 1 129 TRP n 1 130 GLU n 1 131 GLU n 1 132 ILE n 1 133 PRO n 1 134 ALA n 1 135 LEU n 1 136 ASP n 1 137 LYS n 1 138 GLU n 1 139 LEU n 1 140 LYS n 1 141 ALA n 1 142 LYS n 1 143 GLY n 1 144 LYS n 1 145 SER n 1 146 ALA n 1 147 LEU n 1 148 MET n 1 149 PHE n 1 150 ASN n 1 151 LEU n 1 152 GLN n 1 153 GLU n 1 154 PRO n 1 155 TYR n 1 156 PHE n 1 157 THR n 1 158 TRP n 1 159 PRO n 1 160 LEU n 1 161 ILE n 1 162 ALA n 1 163 ALA n 1 164 ASP n 1 165 GLY n 1 166 GLY n 1 167 TYR n 1 168 ALA n 1 169 PHE n 1 170 LYS n 1 171 TYR n 1 172 GLU n 1 173 ASN n 1 174 GLY n 1 175 LYS n 1 176 TYR n 1 177 ASP n 1 178 ILE n 1 179 LYS n 1 180 ASP n 1 181 VAL n 1 182 GLY n 1 183 VAL n 1 184 ASP n 1 185 ASN n 1 186 ALA n 1 187 GLY n 1 188 ALA n 1 189 LYS n 1 190 ALA n 1 191 GLY n 1 192 LEU n 1 193 THR n 1 194 PHE n 1 195 LEU n 1 196 VAL n 1 197 ASP n 1 198 LEU n 1 199 ILE n 1 200 LYS n 1 201 ASN n 1 202 LYS n 1 203 HIS n 1 204 MET n 1 205 ASN n 1 206 ALA n 1 207 ASP n 1 208 THR n 1 209 ASP n 1 210 TYR n 1 211 SER n 1 212 ILE n 1 213 ALA n 1 214 GLU n 1 215 ALA n 1 216 ALA n 1 217 PHE n 1 218 ASN n 1 219 LYS n 1 220 GLY n 1 221 GLU n 1 222 THR n 1 223 ALA n 1 224 MET n 1 225 THR n 1 226 ILE n 1 227 ASN n 1 228 GLY n 1 229 PRO n 1 230 TRP n 1 231 ALA n 1 232 TRP n 1 233 SER n 1 234 ASN n 1 235 ILE n 1 236 ASP n 1 237 THR n 1 238 SER n 1 239 LYS n 1 240 VAL n 1 241 ASN n 1 242 TYR n 1 243 GLY n 1 244 VAL n 1 245 THR n 1 246 VAL n 1 247 LEU n 1 248 PRO n 1 249 THR n 1 250 PHE n 1 251 LYS n 1 252 GLY n 1 253 GLN n 1 254 PRO n 1 255 SER n 1 256 LYS n 1 257 PRO n 1 258 PHE n 1 259 VAL n 1 260 GLY n 1 261 VAL n 1 262 LEU n 1 263 SER n 1 264 ALA n 1 265 GLY n 1 266 ILE n 1 267 ASN n 1 268 ALA n 1 269 ALA n 1 270 SER n 1 271 PRO n 1 272 ASN n 1 273 LYS n 1 274 GLU n 1 275 LEU n 1 276 ALA n 1 277 LYS n 1 278 GLU n 1 279 PHE n 1 280 LEU n 1 281 GLU n 1 282 ASN n 1 283 TYR n 1 284 LEU n 1 285 LEU n 1 286 THR n 1 287 ASP n 1 288 GLU n 1 289 GLY n 1 290 LEU n 1 291 GLU n 1 292 ALA n 1 293 VAL n 1 294 ASN n 1 295 LYS n 1 296 ASP n 1 297 LYS n 1 298 PRO n 1 299 LEU n 1 300 GLY n 1 301 ALA n 1 302 VAL n 1 303 ALA n 1 304 LEU n 1 305 LYS n 1 306 SER n 1 307 TYR n 1 308 GLU n 1 309 GLU n 1 310 GLU n 1 311 LEU n 1 312 ALA n 1 313 LYS n 1 314 ASP n 1 315 PRO n 1 316 ARG n 1 317 ILE n 1 318 ALA n 1 319 ALA n 1 320 THR n 1 321 MET n 1 322 GLU n 1 323 ASN n 1 324 ALA n 1 325 GLN n 1 326 LYS n 1 327 GLY n 1 328 GLU n 1 329 ILE n 1 330 MET n 1 331 PRO n 1 332 ASN n 1 333 ILE n 1 334 PRO n 1 335 GLN n 1 336 MET n 1 337 SER n 1 338 ALA n 1 339 PHE n 1 340 TRP n 1 341 TYR n 1 342 ALA n 1 343 VAL n 1 344 ARG n 1 345 THR n 1 346 ALA n 1 347 VAL n 1 348 ILE n 1 349 ASN n 1 350 ALA n 1 351 ALA n 1 352 SER n 1 353 GLY n 1 354 ARG n 1 355 GLN n 1 356 THR n 1 357 VAL n 1 358 ASP n 1 359 GLU n 1 360 ALA n 1 361 LEU n 1 362 LYS n 1 363 ASP n 1 364 ALA n 1 365 GLN n 1 366 THR n 1 367 ARG n 1 368 ILE n 1 369 THR n 1 370 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Escherichia _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 562 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type BACTERIAL _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # _pdbx_entity_branch_descriptor.ordinal 1 _pdbx_entity_branch_descriptor.entity_id 2 _pdbx_entity_branch_descriptor.descriptor 'WURCS=2.0/1,7,7/[a2122h-1a_1-5]/1-1-1-1-1-1-1/a1-g4_a4-b1_b4-c1_c4-d1_d4-e1_e4-f1_f4-g1' _pdbx_entity_branch_descriptor.type WURCS _pdbx_entity_branch_descriptor.program PDB2Glycan _pdbx_entity_branch_descriptor.program_version 1.1.0 # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 2 1 GLC C1 O1 7 GLC O4 HO4 sing ? 2 2 2 GLC C1 O1 1 GLC O4 HO4 sing ? 3 2 3 GLC C1 O1 2 GLC O4 HO4 sing ? 4 2 4 GLC C1 O1 3 GLC O4 HO4 sing ? 5 2 5 GLC C1 O1 4 GLC O4 HO4 sing ? 6 2 6 GLC C1 O1 5 GLC O4 HO4 sing ? 7 2 7 GLC C1 O1 6 GLC O4 HO4 sing ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLC 'D-saccharide, alpha linking' . alpha-D-glucopyranose 'alpha-D-glucose; D-glucose; glucose' 'C6 H12 O6' 180.156 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier GLC 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpa GLC 'COMMON NAME' GMML 1.0 a-D-glucopyranose GLC 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Glcp GLC 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Glc # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LYS 1 1 1 LYS LYS A . n A 1 2 ILE 2 2 2 ILE ILE A . n A 1 3 GLU 3 3 3 GLU GLU A . n A 1 4 GLU 4 4 4 GLU GLU A . n A 1 5 GLY 5 5 5 GLY GLY A . n A 1 6 LYS 6 6 6 LYS LYS A . n A 1 7 LEU 7 7 7 LEU LEU A . n A 1 8 VAL 8 8 8 VAL VAL A . n A 1 9 ILE 9 9 9 ILE ILE A . n A 1 10 TRP 10 10 10 TRP TRP A . n A 1 11 ILE 11 11 11 ILE ILE A . n A 1 12 ASN 12 12 12 ASN ASN A . n A 1 13 GLY 13 13 13 GLY GLY A . n A 1 14 ASP 14 14 14 ASP ASP A . n A 1 15 LYS 15 15 15 LYS LYS A . n A 1 16 GLY 16 16 16 GLY GLY A . n A 1 17 TYR 17 17 17 TYR TYR A . n A 1 18 ASN 18 18 18 ASN ASN A . n A 1 19 GLY 19 19 19 GLY GLY A . n A 1 20 LEU 20 20 20 LEU LEU A . n A 1 21 ALA 21 21 21 ALA ALA A . n A 1 22 GLU 22 22 22 GLU GLU A . n A 1 23 VAL 23 23 23 VAL VAL A . n A 1 24 GLY 24 24 24 GLY GLY A . n A 1 25 LYS 25 25 25 LYS LYS A . n A 1 26 LYS 26 26 26 LYS LYS A . n A 1 27 PHE 27 27 27 PHE PHE A . n A 1 28 GLU 28 28 28 GLU GLU A . n A 1 29 LYS 29 29 29 LYS LYS A . n A 1 30 ASP 30 30 30 ASP ASP A . n A 1 31 THR 31 31 31 THR THR A . n A 1 32 GLY 32 32 32 GLY GLY A . n A 1 33 ILE 33 33 33 ILE ILE A . n A 1 34 LYS 34 34 34 LYS LYS A . n A 1 35 VAL 35 35 35 VAL VAL A . n A 1 36 THR 36 36 36 THR THR A . n A 1 37 VAL 37 37 37 VAL VAL A . n A 1 38 GLU 38 38 38 GLU GLU A . n A 1 39 HIS 39 39 39 HIS HIS A . n A 1 40 PRO 40 40 40 PRO PRO A . n A 1 41 ASP 41 41 41 ASP ASP A . n A 1 42 LYS 42 42 42 LYS LYS A . n A 1 43 LEU 43 43 43 LEU LEU A . n A 1 44 GLU 44 44 44 GLU GLU A . n A 1 45 GLU 45 45 45 GLU GLU A . n A 1 46 LYS 46 46 46 LYS LYS A . n A 1 47 PHE 47 47 47 PHE PHE A . n A 1 48 PRO 48 48 48 PRO PRO A . n A 1 49 GLN 49 49 49 GLN GLN A . n A 1 50 VAL 50 50 50 VAL VAL A . n A 1 51 ALA 51 51 51 ALA ALA A . n A 1 52 ALA 52 52 52 ALA ALA A . n A 1 53 THR 53 53 53 THR THR A . n A 1 54 GLY 54 54 54 GLY GLY A . n A 1 55 ASP 55 55 55 ASP ASP A . n A 1 56 GLY 56 56 56 GLY GLY A . n A 1 57 PRO 57 57 57 PRO PRO A . n A 1 58 ASP 58 58 58 ASP ASP A . n A 1 59 ILE 59 59 59 ILE ILE A . n A 1 60 ILE 60 60 60 ILE ILE A . n A 1 61 PHE 61 61 61 PHE PHE A . n A 1 62 TRP 62 62 62 TRP TRP A . n A 1 63 ALA 63 63 63 ALA ALA A . n A 1 64 HIS 64 64 64 HIS HIS A . n A 1 65 ASP 65 65 65 ASP ASP A . n A 1 66 ARG 66 66 66 ARG ARG A . n A 1 67 PHE 67 67 67 PHE PHE A . n A 1 68 GLY 68 68 68 GLY GLY A . n A 1 69 GLY 69 69 69 GLY GLY A . n A 1 70 TYR 70 70 70 TYR TYR A . n A 1 71 ALA 71 71 71 ALA ALA A . n A 1 72 GLN 72 72 72 GLN GLN A . n A 1 73 SER 73 73 73 SER SER A . n A 1 74 GLY 74 74 74 GLY GLY A . n A 1 75 LEU 75 75 75 LEU LEU A . n A 1 76 LEU 76 76 76 LEU LEU A . n A 1 77 ALA 77 77 77 ALA ALA A . n A 1 78 GLU 78 78 78 GLU GLU A . n A 1 79 ILE 79 79 79 ILE ILE A . n A 1 80 THR 80 80 80 THR THR A . n A 1 81 PRO 81 81 81 PRO PRO A . n A 1 82 ASP 82 82 82 ASP ASP A . n A 1 83 LYS 83 83 83 LYS LYS A . n A 1 84 ALA 84 84 84 ALA ALA A . n A 1 85 PHE 85 85 85 PHE PHE A . n A 1 86 GLN 86 86 86 GLN GLN A . n A 1 87 ASP 87 87 87 ASP ASP A . n A 1 88 LYS 88 88 88 LYS LYS A . n A 1 89 LEU 89 89 89 LEU LEU A . n A 1 90 TYR 90 90 90 TYR TYR A . n A 1 91 PRO 91 91 91 PRO PRO A . n A 1 92 PHE 92 92 92 PHE PHE A . n A 1 93 THR 93 93 93 THR THR A . n A 1 94 TRP 94 94 94 TRP TRP A . n A 1 95 ASP 95 95 95 ASP ASP A . n A 1 96 ALA 96 96 96 ALA ALA A . n A 1 97 VAL 97 97 97 VAL VAL A . n A 1 98 ARG 98 98 98 ARG ARG A . n A 1 99 TYR 99 99 99 TYR TYR A . n A 1 100 ASN 100 100 100 ASN ASN A . n A 1 101 GLY 101 101 101 GLY GLY A . n A 1 102 LYS 102 102 102 LYS LYS A . n A 1 103 LEU 103 103 103 LEU LEU A . n A 1 104 ILE 104 104 104 ILE ILE A . n A 1 105 ALA 105 105 105 ALA ALA A . n A 1 106 TYR 106 106 106 TYR TYR A . n A 1 107 PRO 107 107 107 PRO PRO A . n A 1 108 ILE 108 108 108 ILE ILE A . n A 1 109 ALA 109 109 109 ALA ALA A . n A 1 110 VAL 110 110 110 VAL VAL A . n A 1 111 GLU 111 111 111 GLU GLU A . n A 1 112 ALA 112 112 112 ALA ALA A . n A 1 113 LEU 113 113 113 LEU LEU A . n A 1 114 SER 114 114 114 SER SER A . n A 1 115 LEU 115 115 115 LEU LEU A . n A 1 116 ILE 116 116 116 ILE ILE A . n A 1 117 TYR 117 117 117 TYR TYR A . n A 1 118 ASN 118 118 118 ASN ASN A . n A 1 119 LYS 119 119 119 LYS LYS A . n A 1 120 ASP 120 120 120 ASP ASP A . n A 1 121 LEU 121 121 121 LEU LEU A . n A 1 122 LEU 122 122 122 LEU LEU A . n A 1 123 PRO 123 123 123 PRO PRO A . n A 1 124 ASN 124 124 124 ASN ASN A . n A 1 125 PRO 125 125 125 PRO PRO A . n A 1 126 PRO 126 126 126 PRO PRO A . n A 1 127 LYS 127 127 127 LYS LYS A . n A 1 128 THR 128 128 128 THR THR A . n A 1 129 TRP 129 129 129 TRP TRP A . n A 1 130 GLU 130 130 130 GLU GLU A . n A 1 131 GLU 131 131 131 GLU GLU A . n A 1 132 ILE 132 132 132 ILE ILE A . n A 1 133 PRO 133 133 133 PRO PRO A . n A 1 134 ALA 134 134 134 ALA ALA A . n A 1 135 LEU 135 135 135 LEU LEU A . n A 1 136 ASP 136 136 136 ASP ASP A . n A 1 137 LYS 137 137 137 LYS LYS A . n A 1 138 GLU 138 138 138 GLU GLU A . n A 1 139 LEU 139 139 139 LEU LEU A . n A 1 140 LYS 140 140 140 LYS LYS A . n A 1 141 ALA 141 141 141 ALA ALA A . n A 1 142 LYS 142 142 142 LYS LYS A . n A 1 143 GLY 143 143 143 GLY GLY A . n A 1 144 LYS 144 144 144 LYS LYS A . n A 1 145 SER 145 145 145 SER SER A . n A 1 146 ALA 146 146 146 ALA ALA A . n A 1 147 LEU 147 147 147 LEU LEU A . n A 1 148 MET 148 148 148 MET MET A . n A 1 149 PHE 149 149 149 PHE PHE A . n A 1 150 ASN 150 150 150 ASN ASN A . n A 1 151 LEU 151 151 151 LEU LEU A . n A 1 152 GLN 152 152 152 GLN GLN A . n A 1 153 GLU 153 153 153 GLU GLU A . n A 1 154 PRO 154 154 154 PRO PRO A . n A 1 155 TYR 155 155 155 TYR TYR A . n A 1 156 PHE 156 156 156 PHE PHE A . n A 1 157 THR 157 157 157 THR THR A . n A 1 158 TRP 158 158 158 TRP TRP A . n A 1 159 PRO 159 159 159 PRO PRO A . n A 1 160 LEU 160 160 160 LEU LEU A . n A 1 161 ILE 161 161 161 ILE ILE A . n A 1 162 ALA 162 162 162 ALA ALA A . n A 1 163 ALA 163 163 163 ALA ALA A . n A 1 164 ASP 164 164 164 ASP ASP A . n A 1 165 GLY 165 165 165 GLY GLY A . n A 1 166 GLY 166 166 166 GLY GLY A . n A 1 167 TYR 167 167 167 TYR TYR A . n A 1 168 ALA 168 168 168 ALA ALA A . n A 1 169 PHE 169 169 169 PHE PHE A . n A 1 170 LYS 170 170 170 LYS LYS A . n A 1 171 TYR 171 171 171 TYR TYR A . n A 1 172 GLU 172 172 172 GLU GLU A . n A 1 173 ASN 173 173 173 ASN ASN A . n A 1 174 GLY 174 174 174 GLY GLY A . n A 1 175 LYS 175 175 175 LYS LYS A . n A 1 176 TYR 176 176 176 TYR TYR A . n A 1 177 ASP 177 177 177 ASP ASP A . n A 1 178 ILE 178 178 178 ILE ILE A . n A 1 179 LYS 179 179 179 LYS LYS A . n A 1 180 ASP 180 180 180 ASP ASP A . n A 1 181 VAL 181 181 181 VAL VAL A . n A 1 182 GLY 182 182 182 GLY GLY A . n A 1 183 VAL 183 183 183 VAL VAL A . n A 1 184 ASP 184 184 184 ASP ASP A . n A 1 185 ASN 185 185 185 ASN ASN A . n A 1 186 ALA 186 186 186 ALA ALA A . n A 1 187 GLY 187 187 187 GLY GLY A . n A 1 188 ALA 188 188 188 ALA ALA A . n A 1 189 LYS 189 189 189 LYS LYS A . n A 1 190 ALA 190 190 190 ALA ALA A . n A 1 191 GLY 191 191 191 GLY GLY A . n A 1 192 LEU 192 192 192 LEU LEU A . n A 1 193 THR 193 193 193 THR THR A . n A 1 194 PHE 194 194 194 PHE PHE A . n A 1 195 LEU 195 195 195 LEU LEU A . n A 1 196 VAL 196 196 196 VAL VAL A . n A 1 197 ASP 197 197 197 ASP ASP A . n A 1 198 LEU 198 198 198 LEU LEU A . n A 1 199 ILE 199 199 199 ILE ILE A . n A 1 200 LYS 200 200 200 LYS LYS A . n A 1 201 ASN 201 201 201 ASN ASN A . n A 1 202 LYS 202 202 202 LYS LYS A . n A 1 203 HIS 203 203 203 HIS HIS A . n A 1 204 MET 204 204 204 MET MET A . n A 1 205 ASN 205 205 205 ASN ASN A . n A 1 206 ALA 206 206 206 ALA ALA A . n A 1 207 ASP 207 207 207 ASP ASP A . n A 1 208 THR 208 208 208 THR THR A . n A 1 209 ASP 209 209 209 ASP ASP A . n A 1 210 TYR 210 210 210 TYR TYR A . n A 1 211 SER 211 211 211 SER SER A . n A 1 212 ILE 212 212 212 ILE ILE A . n A 1 213 ALA 213 213 213 ALA ALA A . n A 1 214 GLU 214 214 214 GLU GLU A . n A 1 215 ALA 215 215 215 ALA ALA A . n A 1 216 ALA 216 216 216 ALA ALA A . n A 1 217 PHE 217 217 217 PHE PHE A . n A 1 218 ASN 218 218 218 ASN ASN A . n A 1 219 LYS 219 219 219 LYS LYS A . n A 1 220 GLY 220 220 220 GLY GLY A . n A 1 221 GLU 221 221 221 GLU GLU A . n A 1 222 THR 222 222 222 THR THR A . n A 1 223 ALA 223 223 223 ALA ALA A . n A 1 224 MET 224 224 224 MET MET A . n A 1 225 THR 225 225 225 THR THR A . n A 1 226 ILE 226 226 226 ILE ILE A . n A 1 227 ASN 227 227 227 ASN ASN A . n A 1 228 GLY 228 228 228 GLY GLY A . n A 1 229 PRO 229 229 229 PRO PRO A . n A 1 230 TRP 230 230 230 TRP TRP A . n A 1 231 ALA 231 231 231 ALA ALA A . n A 1 232 TRP 232 232 232 TRP TRP A . n A 1 233 SER 233 233 233 SER SER A . n A 1 234 ASN 234 234 234 ASN ASN A . n A 1 235 ILE 235 235 235 ILE ILE A . n A 1 236 ASP 236 236 236 ASP ASP A . n A 1 237 THR 237 237 237 THR THR A . n A 1 238 SER 238 238 238 SER SER A . n A 1 239 LYS 239 239 239 LYS LYS A . n A 1 240 VAL 240 240 240 VAL VAL A . n A 1 241 ASN 241 241 241 ASN ASN A . n A 1 242 TYR 242 242 242 TYR TYR A . n A 1 243 GLY 243 243 243 GLY GLY A . n A 1 244 VAL 244 244 244 VAL VAL A . n A 1 245 THR 245 245 245 THR THR A . n A 1 246 VAL 246 246 246 VAL VAL A . n A 1 247 LEU 247 247 247 LEU LEU A . n A 1 248 PRO 248 248 248 PRO PRO A . n A 1 249 THR 249 249 249 THR THR A . n A 1 250 PHE 250 250 250 PHE PHE A . n A 1 251 LYS 251 251 251 LYS LYS A . n A 1 252 GLY 252 252 252 GLY GLY A . n A 1 253 GLN 253 253 253 GLN GLN A . n A 1 254 PRO 254 254 254 PRO PRO A . n A 1 255 SER 255 255 255 SER SER A . n A 1 256 LYS 256 256 256 LYS LYS A . n A 1 257 PRO 257 257 257 PRO PRO A . n A 1 258 PHE 258 258 258 PHE PHE A . n A 1 259 VAL 259 259 259 VAL VAL A . n A 1 260 GLY 260 260 260 GLY GLY A . n A 1 261 VAL 261 261 261 VAL VAL A . n A 1 262 LEU 262 262 262 LEU LEU A . n A 1 263 SER 263 263 263 SER SER A . n A 1 264 ALA 264 264 264 ALA ALA A . n A 1 265 GLY 265 265 265 GLY GLY A . n A 1 266 ILE 266 266 266 ILE ILE A . n A 1 267 ASN 267 267 267 ASN ASN A . n A 1 268 ALA 268 268 268 ALA ALA A . n A 1 269 ALA 269 269 269 ALA ALA A . n A 1 270 SER 270 270 270 SER SER A . n A 1 271 PRO 271 271 271 PRO PRO A . n A 1 272 ASN 272 272 272 ASN ASN A . n A 1 273 LYS 273 273 273 LYS LYS A . n A 1 274 GLU 274 274 274 GLU GLU A . n A 1 275 LEU 275 275 275 LEU LEU A . n A 1 276 ALA 276 276 276 ALA ALA A . n A 1 277 LYS 277 277 277 LYS LYS A . n A 1 278 GLU 278 278 278 GLU GLU A . n A 1 279 PHE 279 279 279 PHE PHE A . n A 1 280 LEU 280 280 280 LEU LEU A . n A 1 281 GLU 281 281 281 GLU GLU A . n A 1 282 ASN 282 282 282 ASN ASN A . n A 1 283 TYR 283 283 283 TYR TYR A . n A 1 284 LEU 284 284 284 LEU LEU A . n A 1 285 LEU 285 285 285 LEU LEU A . n A 1 286 THR 286 286 286 THR THR A . n A 1 287 ASP 287 287 287 ASP ASP A . n A 1 288 GLU 288 288 288 GLU GLU A . n A 1 289 GLY 289 289 289 GLY GLY A . n A 1 290 LEU 290 290 290 LEU LEU A . n A 1 291 GLU 291 291 291 GLU GLU A . n A 1 292 ALA 292 292 292 ALA ALA A . n A 1 293 VAL 293 293 293 VAL VAL A . n A 1 294 ASN 294 294 294 ASN ASN A . n A 1 295 LYS 295 295 295 LYS LYS A . n A 1 296 ASP 296 296 296 ASP ASP A . n A 1 297 LYS 297 297 297 LYS LYS A . n A 1 298 PRO 298 298 298 PRO PRO A . n A 1 299 LEU 299 299 299 LEU LEU A . n A 1 300 GLY 300 300 300 GLY GLY A . n A 1 301 ALA 301 301 301 ALA ALA A . n A 1 302 VAL 302 302 302 VAL VAL A . n A 1 303 ALA 303 303 303 ALA ALA A . n A 1 304 LEU 304 304 304 LEU LEU A . n A 1 305 LYS 305 305 305 LYS LYS A . n A 1 306 SER 306 306 306 SER SER A . n A 1 307 TYR 307 307 307 TYR TYR A . n A 1 308 GLU 308 308 308 GLU GLU A . n A 1 309 GLU 309 309 309 GLU GLU A . n A 1 310 GLU 310 310 310 GLU GLU A . n A 1 311 LEU 311 311 311 LEU LEU A . n A 1 312 ALA 312 312 312 ALA ALA A . n A 1 313 LYS 313 313 313 LYS LYS A . n A 1 314 ASP 314 314 314 ASP ASP A . n A 1 315 PRO 315 315 315 PRO PRO A . n A 1 316 ARG 316 316 316 ARG ARG A . n A 1 317 ILE 317 317 317 ILE ILE A . n A 1 318 ALA 318 318 318 ALA ALA A . n A 1 319 ALA 319 319 319 ALA ALA A . n A 1 320 THR 320 320 320 THR THR A . n A 1 321 MET 321 321 321 MET MET A . n A 1 322 GLU 322 322 322 GLU GLU A . n A 1 323 ASN 323 323 323 ASN ASN A . n A 1 324 ALA 324 324 324 ALA ALA A . n A 1 325 GLN 325 325 325 GLN GLN A . n A 1 326 LYS 326 326 326 LYS LYS A . n A 1 327 GLY 327 327 327 GLY GLY A . n A 1 328 GLU 328 328 328 GLU GLU A . n A 1 329 ILE 329 329 329 ILE ILE A . n A 1 330 MET 330 330 330 MET MET A . n A 1 331 PRO 331 331 331 PRO PRO A . n A 1 332 ASN 332 332 332 ASN ASN A . n A 1 333 ILE 333 333 333 ILE ILE A . n A 1 334 PRO 334 334 334 PRO PRO A . n A 1 335 GLN 335 335 335 GLN GLN A . n A 1 336 MET 336 336 336 MET MET A . n A 1 337 SER 337 337 337 SER SER A . n A 1 338 ALA 338 338 338 ALA ALA A . n A 1 339 PHE 339 339 339 PHE PHE A . n A 1 340 TRP 340 340 340 TRP TRP A . n A 1 341 TYR 341 341 341 TYR TYR A . n A 1 342 ALA 342 342 342 ALA ALA A . n A 1 343 VAL 343 343 343 VAL VAL A . n A 1 344 ARG 344 344 344 ARG ARG A . n A 1 345 THR 345 345 345 THR THR A . n A 1 346 ALA 346 346 346 ALA ALA A . n A 1 347 VAL 347 347 347 VAL VAL A . n A 1 348 ILE 348 348 348 ILE ILE A . n A 1 349 ASN 349 349 349 ASN ASN A . n A 1 350 ALA 350 350 350 ALA ALA A . n A 1 351 ALA 351 351 351 ALA ALA A . n A 1 352 SER 352 352 352 SER SER A . n A 1 353 GLY 353 353 353 GLY GLY A . n A 1 354 ARG 354 354 354 ARG ARG A . n A 1 355 GLN 355 355 355 GLN GLN A . n A 1 356 THR 356 356 356 THR THR A . n A 1 357 VAL 357 357 357 VAL VAL A . n A 1 358 ASP 358 358 358 ASP ASP A . n A 1 359 GLU 359 359 359 GLU GLU A . n A 1 360 ALA 360 360 360 ALA ALA A . n A 1 361 LEU 361 361 361 LEU LEU A . n A 1 362 LYS 362 362 362 LYS LYS A . n A 1 363 ASP 363 363 363 ASP ASP A . n A 1 364 ALA 364 364 364 ALA ALA A . n A 1 365 GLN 365 365 365 GLN GLN A . n A 1 366 THR 366 366 366 THR THR A . n A 1 367 ARG 367 367 367 ARG ARG A . n A 1 368 ILE 368 368 368 ILE ILE A . n A 1 369 THR 369 369 369 THR THR A . n A 1 370 LYS 370 370 370 LYS LYS A . n # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero B 2 GLC 1 B GLC 1 ? BCD 371 n B 2 GLC 2 B GLC 2 ? BCD 371 n B 2 GLC 3 B GLC 3 ? BCD 371 n B 2 GLC 4 B GLC 4 ? BCD 371 n B 2 GLC 5 B GLC 5 ? BCD 371 n B 2 GLC 6 B GLC 6 ? BCD 371 n B 2 GLC 7 B GLC 7 ? BCD 371 n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 HOH 1 372 372 HOH HOH A . C 3 HOH 2 373 373 HOH HOH A . C 3 HOH 3 374 374 HOH HOH A . C 3 HOH 4 375 375 HOH HOH A . C 3 HOH 5 376 376 HOH HOH A . C 3 HOH 6 377 377 HOH HOH A . C 3 HOH 7 378 378 HOH HOH A . C 3 HOH 8 379 379 HOH HOH A . C 3 HOH 9 380 380 HOH HOH A . C 3 HOH 10 381 381 HOH HOH A . C 3 HOH 11 382 382 HOH HOH A . C 3 HOH 12 383 383 HOH HOH A . C 3 HOH 13 384 384 HOH HOH A . C 3 HOH 14 385 385 HOH HOH A . C 3 HOH 15 386 386 HOH HOH A . C 3 HOH 16 387 387 HOH HOH A . C 3 HOH 17 388 388 HOH HOH A . C 3 HOH 18 389 389 HOH HOH A . C 3 HOH 19 390 390 HOH HOH A . C 3 HOH 20 391 391 HOH HOH A . C 3 HOH 21 392 392 HOH HOH A . C 3 HOH 22 393 393 HOH HOH A . C 3 HOH 23 394 394 HOH HOH A . C 3 HOH 24 395 395 HOH HOH A . C 3 HOH 25 396 396 HOH HOH A . C 3 HOH 26 397 397 HOH HOH A . C 3 HOH 27 398 398 HOH HOH A . C 3 HOH 28 399 399 HOH HOH A . C 3 HOH 29 400 400 HOH HOH A . C 3 HOH 30 401 401 HOH HOH A . C 3 HOH 31 402 402 HOH HOH A . C 3 HOH 32 403 403 HOH HOH A . C 3 HOH 33 404 404 HOH HOH A . C 3 HOH 34 405 405 HOH HOH A . C 3 HOH 35 406 406 HOH HOH A . C 3 HOH 36 407 407 HOH HOH A . C 3 HOH 37 408 408 HOH HOH A . C 3 HOH 38 409 409 HOH HOH A . C 3 HOH 39 410 410 HOH HOH A . C 3 HOH 40 411 411 HOH HOH A . C 3 HOH 41 412 412 HOH HOH A . C 3 HOH 42 413 413 HOH HOH A . C 3 HOH 43 414 414 HOH HOH A . C 3 HOH 44 415 415 HOH HOH A . C 3 HOH 45 416 416 HOH HOH A . C 3 HOH 46 417 417 HOH HOH A . C 3 HOH 47 418 418 HOH HOH A . C 3 HOH 48 419 419 HOH HOH A . C 3 HOH 49 420 420 HOH HOH A . C 3 HOH 50 421 421 HOH HOH A . C 3 HOH 51 422 422 HOH HOH A . C 3 HOH 52 423 423 HOH HOH A . C 3 HOH 53 424 424 HOH HOH A . C 3 HOH 54 425 425 HOH HOH A . C 3 HOH 55 426 426 HOH HOH A . C 3 HOH 56 427 427 HOH HOH A . C 3 HOH 57 428 428 HOH HOH A . C 3 HOH 58 429 429 HOH HOH A . C 3 HOH 59 430 430 HOH HOH A . C 3 HOH 60 431 431 HOH HOH A . C 3 HOH 61 432 432 HOH HOH A . C 3 HOH 62 433 433 HOH HOH A . C 3 HOH 63 434 434 HOH HOH A . C 3 HOH 64 435 435 HOH HOH A . C 3 HOH 65 436 436 HOH HOH A . C 3 HOH 66 437 437 HOH HOH A . C 3 HOH 67 438 438 HOH HOH A . C 3 HOH 68 439 439 HOH HOH A . C 3 HOH 69 440 440 HOH HOH A . C 3 HOH 70 441 441 HOH HOH A . C 3 HOH 71 442 442 HOH HOH A . C 3 HOH 72 443 443 HOH HOH A . C 3 HOH 73 444 444 HOH HOH A . C 3 HOH 74 445 445 HOH HOH A . C 3 HOH 75 446 446 HOH HOH A . C 3 HOH 76 447 447 HOH HOH A . C 3 HOH 77 449 449 HOH HOH A . C 3 HOH 78 450 450 HOH HOH A . C 3 HOH 79 451 451 HOH HOH A . C 3 HOH 80 452 452 HOH HOH A . C 3 HOH 81 453 453 HOH HOH A . C 3 HOH 82 454 454 HOH HOH A . C 3 HOH 83 455 455 HOH HOH A . C 3 HOH 84 456 456 HOH HOH A . C 3 HOH 85 457 457 HOH HOH A . C 3 HOH 86 458 458 HOH HOH A . C 3 HOH 87 459 459 HOH HOH A . C 3 HOH 88 460 460 HOH HOH A . C 3 HOH 89 461 461 HOH HOH A . C 3 HOH 90 462 462 HOH HOH A . C 3 HOH 91 463 463 HOH HOH A . C 3 HOH 92 464 464 HOH HOH A . C 3 HOH 93 465 465 HOH HOH A . C 3 HOH 94 466 466 HOH HOH A . C 3 HOH 95 467 467 HOH HOH A . C 3 HOH 96 468 468 HOH HOH A . C 3 HOH 97 469 469 HOH HOH A . C 3 HOH 98 470 470 HOH HOH A . C 3 HOH 99 471 471 HOH HOH A . C 3 HOH 100 472 472 HOH HOH A . C 3 HOH 101 473 473 HOH HOH A . C 3 HOH 102 474 474 HOH HOH A . C 3 HOH 103 475 475 HOH HOH A . C 3 HOH 104 476 476 HOH HOH A . C 3 HOH 105 477 477 HOH HOH A . C 3 HOH 106 478 478 HOH HOH A . C 3 HOH 107 479 479 HOH HOH A . C 3 HOH 108 480 480 HOH HOH A . C 3 HOH 109 481 481 HOH HOH A . C 3 HOH 110 482 482 HOH HOH A . C 3 HOH 111 483 483 HOH HOH A . C 3 HOH 112 484 484 HOH HOH A . C 3 HOH 113 485 485 HOH HOH A . C 3 HOH 114 486 486 HOH HOH A . C 3 HOH 115 487 487 HOH HOH A . C 3 HOH 116 488 488 HOH HOH A . C 3 HOH 117 489 489 HOH HOH A . C 3 HOH 118 490 490 HOH HOH A . C 3 HOH 119 491 491 HOH HOH A . C 3 HOH 120 492 492 HOH HOH A . C 3 HOH 121 493 493 HOH HOH A . C 3 HOH 122 494 494 HOH HOH A . C 3 HOH 123 495 495 HOH HOH A . C 3 HOH 124 496 496 HOH HOH A . C 3 HOH 125 497 497 HOH HOH A . C 3 HOH 126 498 498 HOH HOH A . C 3 HOH 127 499 499 HOH HOH A . C 3 HOH 128 500 500 HOH HOH A . C 3 HOH 129 501 501 HOH HOH A . C 3 HOH 130 502 502 HOH HOH A . C 3 HOH 131 503 503 HOH HOH A . C 3 HOH 132 504 504 HOH HOH A . C 3 HOH 133 505 505 HOH HOH A . C 3 HOH 134 506 506 HOH HOH A . C 3 HOH 135 507 507 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 1 ? CG ? A LYS 1 CG 2 1 Y 1 A LYS 1 ? CD ? A LYS 1 CD 3 1 Y 1 A LYS 1 ? CE ? A LYS 1 CE 4 1 Y 1 A LYS 1 ? NZ ? A LYS 1 NZ 5 1 Y 1 A ILE 2 ? CG1 ? A ILE 2 CG1 6 1 Y 1 A ILE 2 ? CG2 ? A ILE 2 CG2 7 1 Y 1 A ILE 2 ? CD1 ? A ILE 2 CD1 8 1 Y 1 A GLU 3 ? CG ? A GLU 3 CG 9 1 Y 1 A GLU 3 ? CD ? A GLU 3 CD 10 1 Y 1 A GLU 3 ? OE1 ? A GLU 3 OE1 11 1 Y 1 A GLU 3 ? OE2 ? A GLU 3 OE2 12 1 Y 1 A GLU 4 ? CG ? A GLU 4 CG 13 1 Y 1 A GLU 4 ? CD ? A GLU 4 CD 14 1 Y 1 A GLU 4 ? OE1 ? A GLU 4 OE1 15 1 Y 1 A GLU 4 ? OE2 ? A GLU 4 OE2 16 1 Y 1 A SER 270 ? OG ? A SER 270 OG # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal PROLSQ refinement . ? 1 X-PLOR refinement . ? 2 # _cell.entry_id 1DMB _cell.length_a 38.860 _cell.length_b 44.320 _cell.length_c 58.310 _cell.angle_alpha 101.50 _cell.angle_beta 99.30 _cell.angle_gamma 102.20 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1DMB _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # _exptl.entry_id 1DMB _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.31 _exptl_crystal.density_percent_sol 46.64 _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _refine.entry_id 1DMB _refine.ls_number_reflns_obs 30840 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2. _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 10.0 _refine.ls_d_res_high 1.8 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.2100000 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2100000 _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2862 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 77 _refine_hist.number_atoms_solvent 135 _refine_hist.number_atoms_total 3074 _refine_hist.d_res_high 1.8 _refine_hist.d_res_low 10.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.014 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it 0.855 1.000 ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it 1.538 1.500 ? ? 'X-RAY DIFFRACTION' ? x_scbond_it 0.819 1.000 ? ? 'X-RAY DIFFRACTION' ? x_scangle_it 1.505 1.500 ? ? 'X-RAY DIFFRACTION' ? # _database_PDB_matrix.entry_id 1DMB _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1DMB _struct.title ;REFINED 1.8 ANGSTROMS STRUCTURE REVEALS THE MECHANISM OF BINDING OF A CYCLIC SUGAR, BETA-CYCLODEXTRIN, TO THE MALTODEXTRIN BINDING PROTEIN ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1DMB _struct_keywords.pdbx_keywords 'SUGAR TRANSPORT' _struct_keywords.text 'SUGAR TRANSPORT' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code MALE_ECOLI _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession P02928 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_seq_one_letter_code ;MKIKTGARILALSALTTMMFSASALAKIEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATG DGPDIIFWAHDRFGGYAQSGLLAEITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPA LDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAE AAFNKGETAMTINGPWAWSNIDTSKVNYGVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVN KDKPLGAVALKSYEEELAKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDEALKDAQTRITK ; _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1DMB _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 370 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P02928 _struct_ref_seq.db_align_beg 27 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 396 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 370 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 16 ? GLY A 32 ? GLY A 16 GLY A 32 1 ? 17 HELX_P HELX_P2 2 LYS A 42 ? THR A 53 ? LYS A 42 THR A 53 1 ? 12 HELX_P HELX_P3 3 ARG A 66 ? SER A 73 ? ARG A 66 SER A 73 1 ? 8 HELX_P HELX_P4 4 ASP A 82 ? ASP A 87 ? ASP A 82 ASP A 87 1 ? 6 HELX_P HELX_P5 5 TYR A 90 ? ASP A 95 ? TYR A 90 ASP A 95 5 ? 6 HELX_P HELX_P6 6 GLU A 131 ? ALA A 141 ? GLU A 131 ALA A 141 1 ? 11 HELX_P HELX_P7 7 GLU A 153 ? ASP A 164 ? GLU A 153 ASP A 164 1 ? 12 HELX_P HELX_P8 8 ASN A 185 ? ASN A 201 ? ASN A 185 ASN A 201 1 ? 17 HELX_P HELX_P9 9 ASP A 209 ? LYS A 219 ? ASP A 209 LYS A 219 1 ? 11 HELX_P HELX_P10 10 GLY A 228 ? TRP A 230 ? GLY A 228 TRP A 230 5 ? 3 HELX_P HELX_P11 11 ALA A 231 ? LYS A 239 ? ALA A 231 LYS A 239 1 ? 9 HELX_P HELX_P12 12 ASN A 272 ? TYR A 283 ? ASN A 272 TYR A 283 1 ? 12 HELX_P HELX_P13 13 THR A 286 ? LYS A 295 ? THR A 286 LYS A 295 1 ? 10 HELX_P HELX_P14 14 LEU A 304 ? ALA A 312 ? LEU A 304 ALA A 312 1 ? 9 HELX_P HELX_P15 15 ASP A 314 ? GLN A 325 ? ASP A 314 GLN A 325 1 ? 12 HELX_P HELX_P16 16 GLN A 335 ? ALA A 351 ? GLN A 335 ALA A 351 1 ? 17 HELX_P HELX_P17 17 THR A 356 ? THR A 369 ? THR A 356 THR A 369 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B GLC . O4 ? ? ? 1_555 B GLC . C1 ? ? B GLC 1 B GLC 2 1_555 ? ? ? ? ? ? ? 1.393 sing ? covale2 covale both ? B GLC . C1 ? ? ? 1_555 B GLC . O4 ? ? B GLC 1 B GLC 7 1_555 ? ? ? ? ? ? ? 1.402 sing ? covale3 covale both ? B GLC . O4 ? ? ? 1_555 B GLC . C1 ? ? B GLC 2 B GLC 3 1_555 ? ? ? ? ? ? ? 1.401 sing ? covale4 covale both ? B GLC . O4 ? ? ? 1_555 B GLC . C1 ? ? B GLC 3 B GLC 4 1_555 ? ? ? ? ? ? ? 1.422 sing ? covale5 covale both ? B GLC . O4 ? ? ? 1_555 B GLC . C1 ? ? B GLC 4 B GLC 5 1_555 ? ? ? ? ? ? ? 1.422 sing ? covale6 covale both ? B GLC . O4 ? ? ? 1_555 B GLC . C1 ? ? B GLC 5 B GLC 6 1_555 ? ? ? ? ? ? ? 1.434 sing ? covale7 covale both ? B GLC . O4 ? ? ? 1_555 B GLC . C1 ? ? B GLC 6 B GLC 7 1_555 ? ? ? ? ? ? ? 1.436 sing ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 4 ? C ? 2 ? D ? 3 ? E ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? parallel A 5 6 ? parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? parallel C 1 2 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel E 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ALA A 301 ? VAL A 302 ? ALA A 301 VAL A 302 A 2 TYR A 106 ? GLU A 111 ? TYR A 106 GLU A 111 A 3 PHE A 258 ? ILE A 266 ? PHE A 258 ILE A 266 A 4 ILE A 59 ? ALA A 63 ? ILE A 59 ALA A 63 A 5 ILE A 9 ? TRP A 10 ? ILE A 9 TRP A 10 A 6 VAL A 37 ? GLU A 38 ? VAL A 37 GLU A 38 B 1 ALA A 301 ? VAL A 302 ? ALA A 301 VAL A 302 B 2 TYR A 106 ? GLU A 111 ? TYR A 106 GLU A 111 B 3 PHE A 258 ? ILE A 266 ? PHE A 258 ILE A 266 B 4 GLU A 328 ? ILE A 329 ? GLU A 328 ILE A 329 C 1 ARG A 98 ? TYR A 99 ? ARG A 98 TYR A 99 C 2 LYS A 102 ? LEU A 103 ? LYS A 102 LEU A 103 D 1 MET A 224 ? ASN A 227 ? MET A 224 ASN A 227 D 2 SER A 114 ? ASN A 118 ? SER A 114 ASN A 118 D 3 TYR A 242 ? THR A 245 ? TYR A 242 THR A 245 E 1 TYR A 167 ? TYR A 171 ? TYR A 167 TYR A 171 E 2 TYR A 176 ? GLY A 182 ? TYR A 176 GLY A 182 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ALA A 301 ? O ALA A 301 N VAL A 110 ? N VAL A 110 A 2 3 N GLU A 111 ? N GLU A 111 O GLY A 260 ? O GLY A 260 A 3 4 O GLY A 265 ? O GLY A 265 N ILE A 60 ? N ILE A 60 A 4 5 N PHE A 61 ? N PHE A 61 O TRP A 10 ? O TRP A 10 A 5 6 O ILE A 9 ? O ILE A 9 N GLU A 38 ? N GLU A 38 B 1 2 O ALA A 301 ? O ALA A 301 N VAL A 110 ? N VAL A 110 B 2 3 N GLU A 111 ? N GLU A 111 O GLY A 260 ? O GLY A 260 B 3 4 N VAL A 259 ? N VAL A 259 O GLU A 328 ? O GLU A 328 C 1 2 N TYR A 99 ? N TYR A 99 O LYS A 102 ? O LYS A 102 D 1 2 O ASN A 227 ? O ASN A 227 N SER A 114 ? N SER A 114 D 2 3 N TYR A 117 ? N TYR A 117 O GLY A 243 ? O GLY A 243 E 1 2 O LYS A 170 ? O LYS A 170 N ASP A 177 ? N ASP A 177 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OE1 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 GLU _pdbx_validate_close_contact.auth_seq_id_1 111 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 427 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.13 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A ASP 58 ? ? CG A ASP 58 ? ? OD1 A ASP 58 ? ? 109.84 118.30 -8.46 0.90 N 2 1 CA A LEU 89 ? ? CB A LEU 89 ? ? CG A LEU 89 ? ? 130.15 115.30 14.85 2.30 N 3 1 CB A TYR 106 ? ? CG A TYR 106 ? ? CD2 A TYR 106 ? ? 117.18 121.00 -3.82 0.60 N 4 1 CG A GLU 278 ? ? CD A GLU 278 ? ? OE1 A GLU 278 ? ? 132.29 118.30 13.99 2.00 N 5 1 CB A ASP 314 ? ? CG A ASP 314 ? ? OD2 A ASP 314 ? ? 125.25 118.30 6.95 0.90 N 6 1 NE A ARG 316 ? ? CZ A ARG 316 ? ? NH1 A ARG 316 ? ? 126.26 120.30 5.96 0.50 N 7 1 NE A ARG 316 ? ? CZ A ARG 316 ? ? NH2 A ARG 316 ? ? 116.68 120.30 -3.62 0.50 N 8 1 CD A ARG 344 ? ? NE A ARG 344 ? ? CZ A ARG 344 ? ? 132.76 123.60 9.16 1.40 N 9 1 NE A ARG 344 ? ? CZ A ARG 344 ? ? NH1 A ARG 344 ? ? 123.51 120.30 3.21 0.50 N 10 1 NE A ARG 354 ? ? CZ A ARG 354 ? ? NH2 A ARG 354 ? ? 123.80 120.30 3.50 0.50 N 11 1 CB A ASP 363 ? ? CG A ASP 363 ? ? OD2 A ASP 363 ? ? 112.53 118.30 -5.77 0.90 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 3 ? ? -17.63 -54.69 2 1 GLU A 4 ? ? 63.80 133.12 3 1 ASP A 55 ? ? -110.20 -165.98 4 1 ILE A 108 ? ? -98.44 -78.64 5 1 ASN A 173 ? ? -168.14 -42.66 6 1 ALA A 312 ? ? -66.96 18.29 7 1 TRP A 340 ? ? -51.05 -78.05 8 1 GLN A 355 ? ? -176.77 144.70 # _pdbx_molecule_features.prd_id PRD_900012 _pdbx_molecule_features.name beta-cyclodextrin _pdbx_molecule_features.type Oligosaccharide _pdbx_molecule_features.class 'Drug delivery' _pdbx_molecule_features.details 'cyclic oligosaccharide' # _pdbx_molecule.instance_id 1 _pdbx_molecule.prd_id PRD_900012 _pdbx_molecule.asym_id B # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLC C1 C N S 74 GLC C2 C N R 75 GLC C3 C N S 76 GLC C4 C N S 77 GLC C5 C N R 78 GLC C6 C N N 79 GLC O1 O N N 80 GLC O2 O N N 81 GLC O3 O N N 82 GLC O4 O N N 83 GLC O5 O N N 84 GLC O6 O N N 85 GLC H1 H N N 86 GLC H2 H N N 87 GLC H3 H N N 88 GLC H4 H N N 89 GLC H5 H N N 90 GLC H61 H N N 91 GLC H62 H N N 92 GLC HO1 H N N 93 GLC HO2 H N N 94 GLC HO3 H N N 95 GLC HO4 H N N 96 GLC HO6 H N N 97 GLN N N N N 98 GLN CA C N S 99 GLN C C N N 100 GLN O O N N 101 GLN CB C N N 102 GLN CG C N N 103 GLN CD C N N 104 GLN OE1 O N N 105 GLN NE2 N N N 106 GLN OXT O N N 107 GLN H H N N 108 GLN H2 H N N 109 GLN HA H N N 110 GLN HB2 H N N 111 GLN HB3 H N N 112 GLN HG2 H N N 113 GLN HG3 H N N 114 GLN HE21 H N N 115 GLN HE22 H N N 116 GLN HXT H N N 117 GLU N N N N 118 GLU CA C N S 119 GLU C C N N 120 GLU O O N N 121 GLU CB C N N 122 GLU CG C N N 123 GLU CD C N N 124 GLU OE1 O N N 125 GLU OE2 O N N 126 GLU OXT O N N 127 GLU H H N N 128 GLU H2 H N N 129 GLU HA H N N 130 GLU HB2 H N N 131 GLU HB3 H N N 132 GLU HG2 H N N 133 GLU HG3 H N N 134 GLU HE2 H N N 135 GLU HXT H N N 136 GLY N N N N 137 GLY CA C N N 138 GLY C C N N 139 GLY O O N N 140 GLY OXT O N N 141 GLY H H N N 142 GLY H2 H N N 143 GLY HA2 H N N 144 GLY HA3 H N N 145 GLY HXT H N N 146 HIS N N N N 147 HIS CA C N S 148 HIS C C N N 149 HIS O O N N 150 HIS CB C N N 151 HIS CG C Y N 152 HIS ND1 N Y N 153 HIS CD2 C Y N 154 HIS CE1 C Y N 155 HIS NE2 N Y N 156 HIS OXT O N N 157 HIS H H N N 158 HIS H2 H N N 159 HIS HA H N N 160 HIS HB2 H N N 161 HIS HB3 H N N 162 HIS HD1 H N N 163 HIS HD2 H N N 164 HIS HE1 H N N 165 HIS HE2 H N N 166 HIS HXT H N N 167 HOH O O N N 168 HOH H1 H N N 169 HOH H2 H N N 170 ILE N N N N 171 ILE CA C N S 172 ILE C C N N 173 ILE O O N N 174 ILE CB C N S 175 ILE CG1 C N N 176 ILE CG2 C N N 177 ILE CD1 C N N 178 ILE OXT O N N 179 ILE H H N N 180 ILE H2 H N N 181 ILE HA H N N 182 ILE HB H N N 183 ILE HG12 H N N 184 ILE HG13 H N N 185 ILE HG21 H N N 186 ILE HG22 H N N 187 ILE HG23 H N N 188 ILE HD11 H N N 189 ILE HD12 H N N 190 ILE HD13 H N N 191 ILE HXT H N N 192 LEU N N N N 193 LEU CA C N S 194 LEU C C N N 195 LEU O O N N 196 LEU CB C N N 197 LEU CG C N N 198 LEU CD1 C N N 199 LEU CD2 C N N 200 LEU OXT O N N 201 LEU H H N N 202 LEU H2 H N N 203 LEU HA H N N 204 LEU HB2 H N N 205 LEU HB3 H N N 206 LEU HG H N N 207 LEU HD11 H N N 208 LEU HD12 H N N 209 LEU HD13 H N N 210 LEU HD21 H N N 211 LEU HD22 H N N 212 LEU HD23 H N N 213 LEU HXT H N N 214 LYS N N N N 215 LYS CA C N S 216 LYS C C N N 217 LYS O O N N 218 LYS CB C N N 219 LYS CG C N N 220 LYS CD C N N 221 LYS CE C N N 222 LYS NZ N N N 223 LYS OXT O N N 224 LYS H H N N 225 LYS H2 H N N 226 LYS HA H N N 227 LYS HB2 H N N 228 LYS HB3 H N N 229 LYS HG2 H N N 230 LYS HG3 H N N 231 LYS HD2 H N N 232 LYS HD3 H N N 233 LYS HE2 H N N 234 LYS HE3 H N N 235 LYS HZ1 H N N 236 LYS HZ2 H N N 237 LYS HZ3 H N N 238 LYS HXT H N N 239 MET N N N N 240 MET CA C N S 241 MET C C N N 242 MET O O N N 243 MET CB C N N 244 MET CG C N N 245 MET SD S N N 246 MET CE C N N 247 MET OXT O N N 248 MET H H N N 249 MET H2 H N N 250 MET HA H N N 251 MET HB2 H N N 252 MET HB3 H N N 253 MET HG2 H N N 254 MET HG3 H N N 255 MET HE1 H N N 256 MET HE2 H N N 257 MET HE3 H N N 258 MET HXT H N N 259 PHE N N N N 260 PHE CA C N S 261 PHE C C N N 262 PHE O O N N 263 PHE CB C N N 264 PHE CG C Y N 265 PHE CD1 C Y N 266 PHE CD2 C Y N 267 PHE CE1 C Y N 268 PHE CE2 C Y N 269 PHE CZ C Y N 270 PHE OXT O N N 271 PHE H H N N 272 PHE H2 H N N 273 PHE HA H N N 274 PHE HB2 H N N 275 PHE HB3 H N N 276 PHE HD1 H N N 277 PHE HD2 H N N 278 PHE HE1 H N N 279 PHE HE2 H N N 280 PHE HZ H N N 281 PHE HXT H N N 282 PRO N N N N 283 PRO CA C N S 284 PRO C C N N 285 PRO O O N N 286 PRO CB C N N 287 PRO CG C N N 288 PRO CD C N N 289 PRO OXT O N N 290 PRO H H N N 291 PRO HA H N N 292 PRO HB2 H N N 293 PRO HB3 H N N 294 PRO HG2 H N N 295 PRO HG3 H N N 296 PRO HD2 H N N 297 PRO HD3 H N N 298 PRO HXT H N N 299 SER N N N N 300 SER CA C N S 301 SER C C N N 302 SER O O N N 303 SER CB C N N 304 SER OG O N N 305 SER OXT O N N 306 SER H H N N 307 SER H2 H N N 308 SER HA H N N 309 SER HB2 H N N 310 SER HB3 H N N 311 SER HG H N N 312 SER HXT H N N 313 THR N N N N 314 THR CA C N S 315 THR C C N N 316 THR O O N N 317 THR CB C N R 318 THR OG1 O N N 319 THR CG2 C N N 320 THR OXT O N N 321 THR H H N N 322 THR H2 H N N 323 THR HA H N N 324 THR HB H N N 325 THR HG1 H N N 326 THR HG21 H N N 327 THR HG22 H N N 328 THR HG23 H N N 329 THR HXT H N N 330 TRP N N N N 331 TRP CA C N S 332 TRP C C N N 333 TRP O O N N 334 TRP CB C N N 335 TRP CG C Y N 336 TRP CD1 C Y N 337 TRP CD2 C Y N 338 TRP NE1 N Y N 339 TRP CE2 C Y N 340 TRP CE3 C Y N 341 TRP CZ2 C Y N 342 TRP CZ3 C Y N 343 TRP CH2 C Y N 344 TRP OXT O N N 345 TRP H H N N 346 TRP H2 H N N 347 TRP HA H N N 348 TRP HB2 H N N 349 TRP HB3 H N N 350 TRP HD1 H N N 351 TRP HE1 H N N 352 TRP HE3 H N N 353 TRP HZ2 H N N 354 TRP HZ3 H N N 355 TRP HH2 H N N 356 TRP HXT H N N 357 TYR N N N N 358 TYR CA C N S 359 TYR C C N N 360 TYR O O N N 361 TYR CB C N N 362 TYR CG C Y N 363 TYR CD1 C Y N 364 TYR CD2 C Y N 365 TYR CE1 C Y N 366 TYR CE2 C Y N 367 TYR CZ C Y N 368 TYR OH O N N 369 TYR OXT O N N 370 TYR H H N N 371 TYR H2 H N N 372 TYR HA H N N 373 TYR HB2 H N N 374 TYR HB3 H N N 375 TYR HD1 H N N 376 TYR HD2 H N N 377 TYR HE1 H N N 378 TYR HE2 H N N 379 TYR HH H N N 380 TYR HXT H N N 381 VAL N N N N 382 VAL CA C N S 383 VAL C C N N 384 VAL O O N N 385 VAL CB C N N 386 VAL CG1 C N N 387 VAL CG2 C N N 388 VAL OXT O N N 389 VAL H H N N 390 VAL H2 H N N 391 VAL HA H N N 392 VAL HB H N N 393 VAL HG11 H N N 394 VAL HG12 H N N 395 VAL HG13 H N N 396 VAL HG21 H N N 397 VAL HG22 H N N 398 VAL HG23 H N N 399 VAL HXT H N N 400 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLC C1 C2 sing N N 70 GLC C1 O1 sing N N 71 GLC C1 O5 sing N N 72 GLC C1 H1 sing N N 73 GLC C2 C3 sing N N 74 GLC C2 O2 sing N N 75 GLC C2 H2 sing N N 76 GLC C3 C4 sing N N 77 GLC C3 O3 sing N N 78 GLC C3 H3 sing N N 79 GLC C4 C5 sing N N 80 GLC C4 O4 sing N N 81 GLC C4 H4 sing N N 82 GLC C5 C6 sing N N 83 GLC C5 O5 sing N N 84 GLC C5 H5 sing N N 85 GLC C6 O6 sing N N 86 GLC C6 H61 sing N N 87 GLC C6 H62 sing N N 88 GLC O1 HO1 sing N N 89 GLC O2 HO2 sing N N 90 GLC O3 HO3 sing N N 91 GLC O4 HO4 sing N N 92 GLC O6 HO6 sing N N 93 GLN N CA sing N N 94 GLN N H sing N N 95 GLN N H2 sing N N 96 GLN CA C sing N N 97 GLN CA CB sing N N 98 GLN CA HA sing N N 99 GLN C O doub N N 100 GLN C OXT sing N N 101 GLN CB CG sing N N 102 GLN CB HB2 sing N N 103 GLN CB HB3 sing N N 104 GLN CG CD sing N N 105 GLN CG HG2 sing N N 106 GLN CG HG3 sing N N 107 GLN CD OE1 doub N N 108 GLN CD NE2 sing N N 109 GLN NE2 HE21 sing N N 110 GLN NE2 HE22 sing N N 111 GLN OXT HXT sing N N 112 GLU N CA sing N N 113 GLU N H sing N N 114 GLU N H2 sing N N 115 GLU CA C sing N N 116 GLU CA CB sing N N 117 GLU CA HA sing N N 118 GLU C O doub N N 119 GLU C OXT sing N N 120 GLU CB CG sing N N 121 GLU CB HB2 sing N N 122 GLU CB HB3 sing N N 123 GLU CG CD sing N N 124 GLU CG HG2 sing N N 125 GLU CG HG3 sing N N 126 GLU CD OE1 doub N N 127 GLU CD OE2 sing N N 128 GLU OE2 HE2 sing N N 129 GLU OXT HXT sing N N 130 GLY N CA sing N N 131 GLY N H sing N N 132 GLY N H2 sing N N 133 GLY CA C sing N N 134 GLY CA HA2 sing N N 135 GLY CA HA3 sing N N 136 GLY C O doub N N 137 GLY C OXT sing N N 138 GLY OXT HXT sing N N 139 HIS N CA sing N N 140 HIS N H sing N N 141 HIS N H2 sing N N 142 HIS CA C sing N N 143 HIS CA CB sing N N 144 HIS CA HA sing N N 145 HIS C O doub N N 146 HIS C OXT sing N N 147 HIS CB CG sing N N 148 HIS CB HB2 sing N N 149 HIS CB HB3 sing N N 150 HIS CG ND1 sing Y N 151 HIS CG CD2 doub Y N 152 HIS ND1 CE1 doub Y N 153 HIS ND1 HD1 sing N N 154 HIS CD2 NE2 sing Y N 155 HIS CD2 HD2 sing N N 156 HIS CE1 NE2 sing Y N 157 HIS CE1 HE1 sing N N 158 HIS NE2 HE2 sing N N 159 HIS OXT HXT sing N N 160 HOH O H1 sing N N 161 HOH O H2 sing N N 162 ILE N CA sing N N 163 ILE N H sing N N 164 ILE N H2 sing N N 165 ILE CA C sing N N 166 ILE CA CB sing N N 167 ILE CA HA sing N N 168 ILE C O doub N N 169 ILE C OXT sing N N 170 ILE CB CG1 sing N N 171 ILE CB CG2 sing N N 172 ILE CB HB sing N N 173 ILE CG1 CD1 sing N N 174 ILE CG1 HG12 sing N N 175 ILE CG1 HG13 sing N N 176 ILE CG2 HG21 sing N N 177 ILE CG2 HG22 sing N N 178 ILE CG2 HG23 sing N N 179 ILE CD1 HD11 sing N N 180 ILE CD1 HD12 sing N N 181 ILE CD1 HD13 sing N N 182 ILE OXT HXT sing N N 183 LEU N CA sing N N 184 LEU N H sing N N 185 LEU N H2 sing N N 186 LEU CA C sing N N 187 LEU CA CB sing N N 188 LEU CA HA sing N N 189 LEU C O doub N N 190 LEU C OXT sing N N 191 LEU CB CG sing N N 192 LEU CB HB2 sing N N 193 LEU CB HB3 sing N N 194 LEU CG CD1 sing N N 195 LEU CG CD2 sing N N 196 LEU CG HG sing N N 197 LEU CD1 HD11 sing N N 198 LEU CD1 HD12 sing N N 199 LEU CD1 HD13 sing N N 200 LEU CD2 HD21 sing N N 201 LEU CD2 HD22 sing N N 202 LEU CD2 HD23 sing N N 203 LEU OXT HXT sing N N 204 LYS N CA sing N N 205 LYS N H sing N N 206 LYS N H2 sing N N 207 LYS CA C sing N N 208 LYS CA CB sing N N 209 LYS CA HA sing N N 210 LYS C O doub N N 211 LYS C OXT sing N N 212 LYS CB CG sing N N 213 LYS CB HB2 sing N N 214 LYS CB HB3 sing N N 215 LYS CG CD sing N N 216 LYS CG HG2 sing N N 217 LYS CG HG3 sing N N 218 LYS CD CE sing N N 219 LYS CD HD2 sing N N 220 LYS CD HD3 sing N N 221 LYS CE NZ sing N N 222 LYS CE HE2 sing N N 223 LYS CE HE3 sing N N 224 LYS NZ HZ1 sing N N 225 LYS NZ HZ2 sing N N 226 LYS NZ HZ3 sing N N 227 LYS OXT HXT sing N N 228 MET N CA sing N N 229 MET N H sing N N 230 MET N H2 sing N N 231 MET CA C sing N N 232 MET CA CB sing N N 233 MET CA HA sing N N 234 MET C O doub N N 235 MET C OXT sing N N 236 MET CB CG sing N N 237 MET CB HB2 sing N N 238 MET CB HB3 sing N N 239 MET CG SD sing N N 240 MET CG HG2 sing N N 241 MET CG HG3 sing N N 242 MET SD CE sing N N 243 MET CE HE1 sing N N 244 MET CE HE2 sing N N 245 MET CE HE3 sing N N 246 MET OXT HXT sing N N 247 PHE N CA sing N N 248 PHE N H sing N N 249 PHE N H2 sing N N 250 PHE CA C sing N N 251 PHE CA CB sing N N 252 PHE CA HA sing N N 253 PHE C O doub N N 254 PHE C OXT sing N N 255 PHE CB CG sing N N 256 PHE CB HB2 sing N N 257 PHE CB HB3 sing N N 258 PHE CG CD1 doub Y N 259 PHE CG CD2 sing Y N 260 PHE CD1 CE1 sing Y N 261 PHE CD1 HD1 sing N N 262 PHE CD2 CE2 doub Y N 263 PHE CD2 HD2 sing N N 264 PHE CE1 CZ doub Y N 265 PHE CE1 HE1 sing N N 266 PHE CE2 CZ sing Y N 267 PHE CE2 HE2 sing N N 268 PHE CZ HZ sing N N 269 PHE OXT HXT sing N N 270 PRO N CA sing N N 271 PRO N CD sing N N 272 PRO N H sing N N 273 PRO CA C sing N N 274 PRO CA CB sing N N 275 PRO CA HA sing N N 276 PRO C O doub N N 277 PRO C OXT sing N N 278 PRO CB CG sing N N 279 PRO CB HB2 sing N N 280 PRO CB HB3 sing N N 281 PRO CG CD sing N N 282 PRO CG HG2 sing N N 283 PRO CG HG3 sing N N 284 PRO CD HD2 sing N N 285 PRO CD HD3 sing N N 286 PRO OXT HXT sing N N 287 SER N CA sing N N 288 SER N H sing N N 289 SER N H2 sing N N 290 SER CA C sing N N 291 SER CA CB sing N N 292 SER CA HA sing N N 293 SER C O doub N N 294 SER C OXT sing N N 295 SER CB OG sing N N 296 SER CB HB2 sing N N 297 SER CB HB3 sing N N 298 SER OG HG sing N N 299 SER OXT HXT sing N N 300 THR N CA sing N N 301 THR N H sing N N 302 THR N H2 sing N N 303 THR CA C sing N N 304 THR CA CB sing N N 305 THR CA HA sing N N 306 THR C O doub N N 307 THR C OXT sing N N 308 THR CB OG1 sing N N 309 THR CB CG2 sing N N 310 THR CB HB sing N N 311 THR OG1 HG1 sing N N 312 THR CG2 HG21 sing N N 313 THR CG2 HG22 sing N N 314 THR CG2 HG23 sing N N 315 THR OXT HXT sing N N 316 TRP N CA sing N N 317 TRP N H sing N N 318 TRP N H2 sing N N 319 TRP CA C sing N N 320 TRP CA CB sing N N 321 TRP CA HA sing N N 322 TRP C O doub N N 323 TRP C OXT sing N N 324 TRP CB CG sing N N 325 TRP CB HB2 sing N N 326 TRP CB HB3 sing N N 327 TRP CG CD1 doub Y N 328 TRP CG CD2 sing Y N 329 TRP CD1 NE1 sing Y N 330 TRP CD1 HD1 sing N N 331 TRP CD2 CE2 doub Y N 332 TRP CD2 CE3 sing Y N 333 TRP NE1 CE2 sing Y N 334 TRP NE1 HE1 sing N N 335 TRP CE2 CZ2 sing Y N 336 TRP CE3 CZ3 doub Y N 337 TRP CE3 HE3 sing N N 338 TRP CZ2 CH2 doub Y N 339 TRP CZ2 HZ2 sing N N 340 TRP CZ3 CH2 sing Y N 341 TRP CZ3 HZ3 sing N N 342 TRP CH2 HH2 sing N N 343 TRP OXT HXT sing N N 344 TYR N CA sing N N 345 TYR N H sing N N 346 TYR N H2 sing N N 347 TYR CA C sing N N 348 TYR CA CB sing N N 349 TYR CA HA sing N N 350 TYR C O doub N N 351 TYR C OXT sing N N 352 TYR CB CG sing N N 353 TYR CB HB2 sing N N 354 TYR CB HB3 sing N N 355 TYR CG CD1 doub Y N 356 TYR CG CD2 sing Y N 357 TYR CD1 CE1 sing Y N 358 TYR CD1 HD1 sing N N 359 TYR CD2 CE2 doub Y N 360 TYR CD2 HD2 sing N N 361 TYR CE1 CZ doub Y N 362 TYR CE1 HE1 sing N N 363 TYR CE2 CZ sing Y N 364 TYR CE2 HE2 sing N N 365 TYR CZ OH sing N N 366 TYR OH HH sing N N 367 TYR OXT HXT sing N N 368 VAL N CA sing N N 369 VAL N H sing N N 370 VAL N H2 sing N N 371 VAL CA C sing N N 372 VAL CA CB sing N N 373 VAL CA HA sing N N 374 VAL C O doub N N 375 VAL C OXT sing N N 376 VAL CB CG1 sing N N 377 VAL CB CG2 sing N N 378 VAL CB HB sing N N 379 VAL CG1 HG11 sing N N 380 VAL CG1 HG12 sing N N 381 VAL CG1 HG13 sing N N 382 VAL CG2 HG21 sing N N 383 VAL CG2 HG22 sing N N 384 VAL CG2 HG23 sing N N 385 VAL OXT HXT sing N N 386 # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 GLC 1 n 2 GLC 2 n 2 GLC 3 n 2 GLC 4 n 2 GLC 5 n 2 GLC 6 n 2 GLC 7 n # _atom_sites.entry_id 1DMB _atom_sites.fract_transf_matrix[1][1] 0.025733 _atom_sites.fract_transf_matrix[1][2] 0.005564 _atom_sites.fract_transf_matrix[1][3] 0.005731 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.023085 _atom_sites.fract_transf_matrix[2][3] 0.005760 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.017911 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_