data_1DNL # _entry.id 1DNL # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.397 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1DNL pdb_00001dnl 10.2210/pdb1dnl/pdb RCSB RCSB010226 ? ? WWPDB D_1000010226 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2000-01-05 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-04 5 'Structure model' 1 4 2024-10-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Derived calculations' 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Refinement description' 5 5 'Structure model' 'Data collection' 6 5 'Structure model' 'Database references' 7 5 'Structure model' 'Derived calculations' 8 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' chem_comp_atom 3 5 'Structure model' chem_comp_bond 4 5 'Structure model' database_2 5 5 'Structure model' pdbx_entry_details 6 5 'Structure model' pdbx_modification_feature 7 5 'Structure model' struct_conn 8 5 'Structure model' struct_ref_seq_dif 9 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 5 'Structure model' '_struct_ref_seq_dif.details' 5 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 6 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 7 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1DNL _pdbx_database_status.recvd_initial_deposition_date 1999-12-16 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Safo, M.K.' 1 'Mathews, I.' 2 'Musayev, F.N.' 3 'di Salvo, M.L.' 4 'Thiel, D.J.' 5 'Abraham, D.J.' 6 'Schirch, V.' 7 # _citation.id primary _citation.title ;X-ray structure of Escherichia coli pyridoxine 5'-phosphate oxidase complexed with FMN at 1.8 A resolution. ; _citation.journal_abbrev 'Structure Fold.Des.' _citation.journal_volume 8 _citation.page_first 751 _citation.page_last 762 _citation.year 2000 _citation.journal_id_ASTM FODEFH _citation.country UK _citation.journal_id_ISSN 0969-2126 _citation.journal_id_CSD 1263 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 10903950 _citation.pdbx_database_id_DOI '10.1016/S0969-2126(00)00162-3' # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Safo, M.K.' 1 ? primary 'Mathews, I.' 2 ? primary 'Musayev, F.N.' 3 ? primary 'di Salvo, M.L.' 4 ? primary 'Thiel, D.J.' 5 ? primary 'Abraham, D.J.' 6 ? primary 'Schirch, V.' 7 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man ;PYRIDOXINE 5'-PHOSPHATE OXIDASE ; 23439.182 1 1.4.3.5 ? ? ? 2 non-polymer syn 'PHOSPHATE ION' 94.971 1 ? ? ? ? 3 non-polymer syn 'FLAVIN MONONUCLEOTIDE' 456.344 1 ? ? ? ? 4 water nat water 18.015 128 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GGLRRRDLPADPLTLFERWLSQACEAKLADPTA(MSE)VVATVDEHGQPYQRIVLLKHYDEKG(MSE)VFYTNLGSRKAH QIENNPRVSLLFPWHTLERQV(MSE)VIGKAERLSTLEV(MSE)KYFHSRPRDSQIGAWVSKQSSRISARGILESKFLEL KQKFQQGEVPLPSFWGGFRVSLEQIEFWQGGEHRLHDRFLYQRENDAWKIDRLAP ; _entity_poly.pdbx_seq_one_letter_code_can ;GGLRRRDLPADPLTLFERWLSQACEAKLADPTAMVVATVDEHGQPYQRIVLLKHYDEKGMVFYTNLGSRKAHQIENNPRV SLLFPWHTLERQVMVIGKAERLSTLEVMKYFHSRPRDSQIGAWVSKQSSRISARGILESKFLELKQKFQQGEVPLPSFWG GFRVSLEQIEFWQGGEHRLHDRFLYQRENDAWKIDRLAP ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'PHOSPHATE ION' PO4 3 'FLAVIN MONONUCLEOTIDE' FMN 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 GLY n 1 3 LEU n 1 4 ARG n 1 5 ARG n 1 6 ARG n 1 7 ASP n 1 8 LEU n 1 9 PRO n 1 10 ALA n 1 11 ASP n 1 12 PRO n 1 13 LEU n 1 14 THR n 1 15 LEU n 1 16 PHE n 1 17 GLU n 1 18 ARG n 1 19 TRP n 1 20 LEU n 1 21 SER n 1 22 GLN n 1 23 ALA n 1 24 CYS n 1 25 GLU n 1 26 ALA n 1 27 LYS n 1 28 LEU n 1 29 ALA n 1 30 ASP n 1 31 PRO n 1 32 THR n 1 33 ALA n 1 34 MSE n 1 35 VAL n 1 36 VAL n 1 37 ALA n 1 38 THR n 1 39 VAL n 1 40 ASP n 1 41 GLU n 1 42 HIS n 1 43 GLY n 1 44 GLN n 1 45 PRO n 1 46 TYR n 1 47 GLN n 1 48 ARG n 1 49 ILE n 1 50 VAL n 1 51 LEU n 1 52 LEU n 1 53 LYS n 1 54 HIS n 1 55 TYR n 1 56 ASP n 1 57 GLU n 1 58 LYS n 1 59 GLY n 1 60 MSE n 1 61 VAL n 1 62 PHE n 1 63 TYR n 1 64 THR n 1 65 ASN n 1 66 LEU n 1 67 GLY n 1 68 SER n 1 69 ARG n 1 70 LYS n 1 71 ALA n 1 72 HIS n 1 73 GLN n 1 74 ILE n 1 75 GLU n 1 76 ASN n 1 77 ASN n 1 78 PRO n 1 79 ARG n 1 80 VAL n 1 81 SER n 1 82 LEU n 1 83 LEU n 1 84 PHE n 1 85 PRO n 1 86 TRP n 1 87 HIS n 1 88 THR n 1 89 LEU n 1 90 GLU n 1 91 ARG n 1 92 GLN n 1 93 VAL n 1 94 MSE n 1 95 VAL n 1 96 ILE n 1 97 GLY n 1 98 LYS n 1 99 ALA n 1 100 GLU n 1 101 ARG n 1 102 LEU n 1 103 SER n 1 104 THR n 1 105 LEU n 1 106 GLU n 1 107 VAL n 1 108 MSE n 1 109 LYS n 1 110 TYR n 1 111 PHE n 1 112 HIS n 1 113 SER n 1 114 ARG n 1 115 PRO n 1 116 ARG n 1 117 ASP n 1 118 SER n 1 119 GLN n 1 120 ILE n 1 121 GLY n 1 122 ALA n 1 123 TRP n 1 124 VAL n 1 125 SER n 1 126 LYS n 1 127 GLN n 1 128 SER n 1 129 SER n 1 130 ARG n 1 131 ILE n 1 132 SER n 1 133 ALA n 1 134 ARG n 1 135 GLY n 1 136 ILE n 1 137 LEU n 1 138 GLU n 1 139 SER n 1 140 LYS n 1 141 PHE n 1 142 LEU n 1 143 GLU n 1 144 LEU n 1 145 LYS n 1 146 GLN n 1 147 LYS n 1 148 PHE n 1 149 GLN n 1 150 GLN n 1 151 GLY n 1 152 GLU n 1 153 VAL n 1 154 PRO n 1 155 LEU n 1 156 PRO n 1 157 SER n 1 158 PHE n 1 159 TRP n 1 160 GLY n 1 161 GLY n 1 162 PHE n 1 163 ARG n 1 164 VAL n 1 165 SER n 1 166 LEU n 1 167 GLU n 1 168 GLN n 1 169 ILE n 1 170 GLU n 1 171 PHE n 1 172 TRP n 1 173 GLN n 1 174 GLY n 1 175 GLY n 1 176 GLU n 1 177 HIS n 1 178 ARG n 1 179 LEU n 1 180 HIS n 1 181 ASP n 1 182 ARG n 1 183 PHE n 1 184 LEU n 1 185 TYR n 1 186 GLN n 1 187 ARG n 1 188 GLU n 1 189 ASN n 1 190 ASP n 1 191 ALA n 1 192 TRP n 1 193 LYS n 1 194 ILE n 1 195 ASP n 1 196 ARG n 1 197 LEU n 1 198 ALA n 1 199 PRO n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Escherichia _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species 'Escherichia coli' _entity_src_gen.gene_src_strain K-12 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli K12' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 83333 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PET22B _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 FMN non-polymer . 'FLAVIN MONONUCLEOTIDE' 'RIBOFLAVIN MONOPHOSPHATE' 'C17 H21 N4 O9 P' 456.344 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PO4 non-polymer . 'PHOSPHATE ION' ? 'O4 P -3' 94.971 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 20 20 GLY GLY A . n A 1 2 GLY 2 21 21 GLY GLY A . n A 1 3 LEU 3 22 22 LEU LEU A . n A 1 4 ARG 4 23 23 ARG ARG A . n A 1 5 ARG 5 24 24 ARG ARG A . n A 1 6 ARG 6 25 25 ARG ARG A . n A 1 7 ASP 7 26 26 ASP ASP A . n A 1 8 LEU 8 27 27 LEU LEU A . n A 1 9 PRO 9 28 28 PRO PRO A . n A 1 10 ALA 10 29 29 ALA ALA A . n A 1 11 ASP 11 30 30 ASP ASP A . n A 1 12 PRO 12 31 31 PRO PRO A . n A 1 13 LEU 13 32 32 LEU LEU A . n A 1 14 THR 14 33 33 THR THR A . n A 1 15 LEU 15 34 34 LEU LEU A . n A 1 16 PHE 16 35 35 PHE PHE A . n A 1 17 GLU 17 36 36 GLU GLU A . n A 1 18 ARG 18 37 37 ARG ARG A . n A 1 19 TRP 19 38 38 TRP TRP A . n A 1 20 LEU 20 39 39 LEU LEU A . n A 1 21 SER 21 40 40 SER SER A . n A 1 22 GLN 22 41 41 GLN GLN A . n A 1 23 ALA 23 42 42 ALA ALA A . n A 1 24 CYS 24 43 43 CYS CYS A . n A 1 25 GLU 25 44 44 GLU GLU A . n A 1 26 ALA 26 45 45 ALA ALA A . n A 1 27 LYS 27 46 46 LYS LYS A . n A 1 28 LEU 28 47 47 LEU LEU A . n A 1 29 ALA 29 48 48 ALA ALA A . n A 1 30 ASP 30 49 49 ASP ASP A . n A 1 31 PRO 31 50 50 PRO PRO A . n A 1 32 THR 32 51 51 THR THR A . n A 1 33 ALA 33 52 52 ALA ALA A . n A 1 34 MSE 34 53 53 MSE MSE A . n A 1 35 VAL 35 54 54 VAL VAL A . n A 1 36 VAL 36 55 55 VAL VAL A . n A 1 37 ALA 37 56 56 ALA ALA A . n A 1 38 THR 38 57 57 THR THR A . n A 1 39 VAL 39 58 58 VAL VAL A . n A 1 40 ASP 40 59 59 ASP ASP A . n A 1 41 GLU 41 60 60 GLU GLU A . n A 1 42 HIS 42 61 61 HIS HIS A . n A 1 43 GLY 43 62 62 GLY GLY A . n A 1 44 GLN 44 63 63 GLN GLN A . n A 1 45 PRO 45 64 64 PRO PRO A . n A 1 46 TYR 46 65 65 TYR TYR A . n A 1 47 GLN 47 66 66 GLN GLN A . n A 1 48 ARG 48 67 67 ARG ARG A . n A 1 49 ILE 49 68 68 ILE ILE A . n A 1 50 VAL 50 69 69 VAL VAL A . n A 1 51 LEU 51 70 70 LEU LEU A . n A 1 52 LEU 52 71 71 LEU LEU A . n A 1 53 LYS 53 72 72 LYS LYS A . n A 1 54 HIS 54 73 73 HIS HIS A . n A 1 55 TYR 55 74 74 TYR TYR A . n A 1 56 ASP 56 75 75 ASP ASP A . n A 1 57 GLU 57 76 76 GLU GLU A . n A 1 58 LYS 58 77 77 LYS LYS A . n A 1 59 GLY 59 78 78 GLY GLY A . n A 1 60 MSE 60 79 79 MSE MSE A . n A 1 61 VAL 61 80 80 VAL VAL A . n A 1 62 PHE 62 81 81 PHE PHE A . n A 1 63 TYR 63 82 82 TYR TYR A . n A 1 64 THR 64 83 83 THR THR A . n A 1 65 ASN 65 84 84 ASN ASN A . n A 1 66 LEU 66 85 85 LEU LEU A . n A 1 67 GLY 67 86 86 GLY GLY A . n A 1 68 SER 68 87 87 SER SER A . n A 1 69 ARG 69 88 88 ARG ARG A . n A 1 70 LYS 70 89 89 LYS LYS A . n A 1 71 ALA 71 90 90 ALA ALA A . n A 1 72 HIS 72 91 91 HIS HIS A . n A 1 73 GLN 73 92 92 GLN GLN A . n A 1 74 ILE 74 93 93 ILE ILE A . n A 1 75 GLU 75 94 94 GLU GLU A . n A 1 76 ASN 76 95 95 ASN ASN A . n A 1 77 ASN 77 96 96 ASN ASN A . n A 1 78 PRO 78 97 97 PRO PRO A . n A 1 79 ARG 79 98 98 ARG ARG A . n A 1 80 VAL 80 99 99 VAL VAL A . n A 1 81 SER 81 100 100 SER SER A . n A 1 82 LEU 82 101 101 LEU LEU A . n A 1 83 LEU 83 102 102 LEU LEU A . n A 1 84 PHE 84 103 103 PHE PHE A . n A 1 85 PRO 85 104 104 PRO PRO A . n A 1 86 TRP 86 105 105 TRP TRP A . n A 1 87 HIS 87 106 106 HIS HIS A . n A 1 88 THR 88 107 107 THR THR A . n A 1 89 LEU 89 108 108 LEU LEU A . n A 1 90 GLU 90 109 109 GLU GLU A . n A 1 91 ARG 91 110 110 ARG ARG A . n A 1 92 GLN 92 111 111 GLN GLN A . n A 1 93 VAL 93 112 112 VAL VAL A . n A 1 94 MSE 94 113 113 MSE MSE A . n A 1 95 VAL 95 114 114 VAL VAL A . n A 1 96 ILE 96 115 115 ILE ILE A . n A 1 97 GLY 97 116 116 GLY GLY A . n A 1 98 LYS 98 117 117 LYS LYS A . n A 1 99 ALA 99 118 118 ALA ALA A . n A 1 100 GLU 100 119 119 GLU GLU A . n A 1 101 ARG 101 120 120 ARG ARG A . n A 1 102 LEU 102 121 121 LEU LEU A . n A 1 103 SER 103 122 122 SER SER A . n A 1 104 THR 104 123 123 THR THR A . n A 1 105 LEU 105 124 124 LEU LEU A . n A 1 106 GLU 106 125 125 GLU GLU A . n A 1 107 VAL 107 126 126 VAL VAL A . n A 1 108 MSE 108 127 127 MSE MSE A . n A 1 109 LYS 109 128 128 LYS LYS A . n A 1 110 TYR 110 129 129 TYR TYR A . n A 1 111 PHE 111 130 130 PHE PHE A . n A 1 112 HIS 112 131 131 HIS HIS A . n A 1 113 SER 113 132 132 SER SER A . n A 1 114 ARG 114 133 133 ARG ARG A . n A 1 115 PRO 115 134 134 PRO PRO A . n A 1 116 ARG 116 135 135 ARG ARG A . n A 1 117 ASP 117 136 136 ASP ASP A . n A 1 118 SER 118 137 137 SER SER A . n A 1 119 GLN 119 138 138 GLN GLN A . n A 1 120 ILE 120 139 139 ILE ILE A . n A 1 121 GLY 121 140 140 GLY GLY A . n A 1 122 ALA 122 141 141 ALA ALA A . n A 1 123 TRP 123 142 142 TRP TRP A . n A 1 124 VAL 124 143 143 VAL VAL A . n A 1 125 SER 125 144 144 SER SER A . n A 1 126 LYS 126 145 145 LYS LYS A . n A 1 127 GLN 127 146 146 GLN GLN A . n A 1 128 SER 128 147 147 SER SER A . n A 1 129 SER 129 148 148 SER SER A . n A 1 130 ARG 130 149 149 ARG ARG A . n A 1 131 ILE 131 150 150 ILE ILE A . n A 1 132 SER 132 151 151 SER SER A . n A 1 133 ALA 133 152 152 ALA ALA A . n A 1 134 ARG 134 153 153 ARG ARG A . n A 1 135 GLY 135 154 154 GLY GLY A . n A 1 136 ILE 136 155 155 ILE ILE A . n A 1 137 LEU 137 156 156 LEU LEU A . n A 1 138 GLU 138 157 157 GLU GLU A . n A 1 139 SER 139 158 158 SER SER A . n A 1 140 LYS 140 159 159 LYS LYS A . n A 1 141 PHE 141 160 160 PHE PHE A . n A 1 142 LEU 142 161 161 LEU LEU A . n A 1 143 GLU 143 162 162 GLU GLU A . n A 1 144 LEU 144 163 163 LEU LEU A . n A 1 145 LYS 145 164 164 LYS LYS A . n A 1 146 GLN 146 165 165 GLN GLN A . n A 1 147 LYS 147 166 166 LYS LYS A . n A 1 148 PHE 148 167 167 PHE PHE A . n A 1 149 GLN 149 168 168 GLN GLN A . n A 1 150 GLN 150 169 169 GLN GLN A . n A 1 151 GLY 151 170 170 GLY GLY A . n A 1 152 GLU 152 171 171 GLU GLU A . n A 1 153 VAL 153 172 172 VAL VAL A . n A 1 154 PRO 154 173 173 PRO PRO A . n A 1 155 LEU 155 174 174 LEU LEU A . n A 1 156 PRO 156 175 175 PRO PRO A . n A 1 157 SER 157 176 176 SER SER A . n A 1 158 PHE 158 177 177 PHE PHE A . n A 1 159 TRP 159 178 178 TRP TRP A . n A 1 160 GLY 160 179 179 GLY GLY A . n A 1 161 GLY 161 180 180 GLY GLY A . n A 1 162 PHE 162 181 181 PHE PHE A . n A 1 163 ARG 163 182 182 ARG ARG A . n A 1 164 VAL 164 183 183 VAL VAL A . n A 1 165 SER 165 184 184 SER SER A . n A 1 166 LEU 166 185 185 LEU LEU A . n A 1 167 GLU 167 186 186 GLU GLU A . n A 1 168 GLN 168 187 187 GLN GLN A . n A 1 169 ILE 169 188 188 ILE ILE A . n A 1 170 GLU 170 189 189 GLU GLU A . n A 1 171 PHE 171 190 190 PHE PHE A . n A 1 172 TRP 172 191 191 TRP TRP A . n A 1 173 GLN 173 192 192 GLN GLN A . n A 1 174 GLY 174 193 193 GLY GLY A . n A 1 175 GLY 175 194 194 GLY GLY A . n A 1 176 GLU 176 195 195 GLU GLU A . n A 1 177 HIS 177 196 196 HIS HIS A . n A 1 178 ARG 178 197 197 ARG ARG A . n A 1 179 LEU 179 198 198 LEU LEU A . n A 1 180 HIS 180 199 199 HIS HIS A . n A 1 181 ASP 181 200 200 ASP ASP A . n A 1 182 ARG 182 201 201 ARG ARG A . n A 1 183 PHE 183 202 202 PHE PHE A . n A 1 184 LEU 184 203 203 LEU LEU A . n A 1 185 TYR 185 204 204 TYR TYR A . n A 1 186 GLN 186 205 205 GLN GLN A . n A 1 187 ARG 187 206 206 ARG ARG A . n A 1 188 GLU 188 207 207 GLU GLU A . n A 1 189 ASN 189 208 208 ASN ASN A . n A 1 190 ASP 190 209 209 ASP ASP A . n A 1 191 ALA 191 210 210 ALA ALA A . n A 1 192 TRP 192 211 211 TRP TRP A . n A 1 193 LYS 193 212 212 LYS LYS A . n A 1 194 ILE 194 213 213 ILE ILE A . n A 1 195 ASP 195 214 214 ASP ASP A . n A 1 196 ARG 196 215 215 ARG ARG A . n A 1 197 LEU 197 216 216 LEU LEU A . n A 1 198 ALA 198 217 217 ALA ALA A . n A 1 199 PRO 199 218 218 PRO PRO A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PO4 1 275 275 PO4 PO4 A . C 3 FMN 1 250 250 FMN FMN A . D 4 HOH 1 300 300 HOH HOH A . D 4 HOH 2 301 301 HOH HOH A . D 4 HOH 3 302 302 HOH HOH A . D 4 HOH 4 303 303 HOH HOH A . D 4 HOH 5 304 304 HOH HOH A . D 4 HOH 6 305 305 HOH HOH A . D 4 HOH 7 306 306 HOH HOH A . D 4 HOH 8 307 307 HOH HOH A . D 4 HOH 9 308 308 HOH HOH A . D 4 HOH 10 309 309 HOH HOH A . D 4 HOH 11 310 310 HOH HOH A . D 4 HOH 12 311 311 HOH HOH A . D 4 HOH 13 312 312 HOH HOH A . D 4 HOH 14 313 313 HOH HOH A . D 4 HOH 15 314 314 HOH HOH A . D 4 HOH 16 315 315 HOH HOH A . D 4 HOH 17 316 316 HOH HOH A . D 4 HOH 18 317 317 HOH HOH A . D 4 HOH 19 318 318 HOH HOH A . D 4 HOH 20 319 319 HOH HOH A . D 4 HOH 21 320 320 HOH HOH A . D 4 HOH 22 321 321 HOH HOH A . D 4 HOH 23 322 322 HOH HOH A . D 4 HOH 24 323 323 HOH HOH A . D 4 HOH 25 324 324 HOH HOH A . D 4 HOH 26 325 325 HOH HOH A . D 4 HOH 27 326 326 HOH HOH A . D 4 HOH 28 327 327 HOH HOH A . D 4 HOH 29 328 328 HOH HOH A . D 4 HOH 30 329 329 HOH HOH A . D 4 HOH 31 330 330 HOH HOH A . D 4 HOH 32 331 331 HOH HOH A . D 4 HOH 33 332 332 HOH HOH A . D 4 HOH 34 333 333 HOH HOH A . D 4 HOH 35 334 334 HOH HOH A . D 4 HOH 36 335 335 HOH HOH A . D 4 HOH 37 336 336 HOH HOH A . D 4 HOH 38 337 337 HOH HOH A . D 4 HOH 39 338 338 HOH HOH A . D 4 HOH 40 339 339 HOH HOH A . D 4 HOH 41 340 340 HOH HOH A . D 4 HOH 42 341 341 HOH HOH A . D 4 HOH 43 342 342 HOH HOH A . D 4 HOH 44 343 343 HOH HOH A . D 4 HOH 45 344 344 HOH HOH A . D 4 HOH 46 345 345 HOH HOH A . D 4 HOH 47 346 346 HOH HOH A . D 4 HOH 48 347 347 HOH HOH A . D 4 HOH 49 348 348 HOH HOH A . D 4 HOH 50 349 349 HOH HOH A . D 4 HOH 51 350 350 HOH HOH A . D 4 HOH 52 351 351 HOH HOH A . D 4 HOH 53 352 352 HOH HOH A . D 4 HOH 54 353 353 HOH HOH A . D 4 HOH 55 354 354 HOH HOH A . D 4 HOH 56 355 355 HOH HOH A . D 4 HOH 57 356 356 HOH HOH A . D 4 HOH 58 357 357 HOH HOH A . D 4 HOH 59 358 358 HOH HOH A . D 4 HOH 60 359 359 HOH HOH A . D 4 HOH 61 360 360 HOH HOH A . D 4 HOH 62 361 361 HOH HOH A . D 4 HOH 63 362 362 HOH HOH A . D 4 HOH 64 363 363 HOH HOH A . D 4 HOH 65 364 364 HOH HOH A . D 4 HOH 66 365 365 HOH HOH A . D 4 HOH 67 366 366 HOH HOH A . D 4 HOH 68 367 367 HOH HOH A . D 4 HOH 69 368 368 HOH HOH A . D 4 HOH 70 369 369 HOH HOH A . D 4 HOH 71 370 370 HOH HOH A . D 4 HOH 72 371 371 HOH HOH A . D 4 HOH 73 372 372 HOH HOH A . D 4 HOH 74 373 373 HOH HOH A . D 4 HOH 75 374 374 HOH HOH A . D 4 HOH 76 375 375 HOH HOH A . D 4 HOH 77 376 376 HOH HOH A . D 4 HOH 78 377 377 HOH HOH A . D 4 HOH 79 378 378 HOH HOH A . D 4 HOH 80 379 379 HOH HOH A . D 4 HOH 81 380 380 HOH HOH A . D 4 HOH 82 381 381 HOH HOH A . D 4 HOH 83 382 382 HOH HOH A . D 4 HOH 84 383 383 HOH HOH A . D 4 HOH 85 384 384 HOH HOH A . D 4 HOH 86 385 385 HOH HOH A . D 4 HOH 87 386 386 HOH HOH A . D 4 HOH 88 387 387 HOH HOH A . D 4 HOH 89 388 388 HOH HOH A . D 4 HOH 90 389 389 HOH HOH A . D 4 HOH 91 390 390 HOH HOH A . D 4 HOH 92 391 391 HOH HOH A . D 4 HOH 93 392 392 HOH HOH A . D 4 HOH 94 393 393 HOH HOH A . D 4 HOH 95 394 394 HOH HOH A . D 4 HOH 96 395 395 HOH HOH A . D 4 HOH 97 396 396 HOH HOH A . D 4 HOH 98 397 397 HOH HOH A . D 4 HOH 99 398 398 HOH HOH A . D 4 HOH 100 399 399 HOH HOH A . D 4 HOH 101 400 400 HOH HOH A . D 4 HOH 102 401 401 HOH HOH A . D 4 HOH 103 402 402 HOH HOH A . D 4 HOH 104 403 403 HOH HOH A . D 4 HOH 105 404 404 HOH HOH A . D 4 HOH 106 405 405 HOH HOH A . D 4 HOH 107 406 406 HOH HOH A . D 4 HOH 108 407 407 HOH HOH A . D 4 HOH 109 408 408 HOH HOH A . D 4 HOH 110 409 409 HOH HOH A . D 4 HOH 111 410 410 HOH HOH A . D 4 HOH 112 411 411 HOH HOH A . D 4 HOH 113 412 412 HOH HOH A . D 4 HOH 114 413 413 HOH HOH A . D 4 HOH 115 414 414 HOH HOH A . D 4 HOH 116 415 415 HOH HOH A . D 4 HOH 117 416 416 HOH HOH A . D 4 HOH 118 417 417 HOH HOH A . D 4 HOH 119 418 418 HOH HOH A . D 4 HOH 120 419 419 HOH HOH A . D 4 HOH 121 420 420 HOH HOH A . D 4 HOH 122 421 421 HOH HOH A . D 4 HOH 123 423 423 HOH HOH A . D 4 HOH 124 424 424 HOH HOH A . D 4 HOH 125 425 425 HOH HOH A . D 4 HOH 126 426 426 HOH HOH A . D 4 HOH 127 427 427 HOH HOH A . D 4 HOH 128 428 428 HOH HOH A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MLPHARE phasing . ? 1 CNS refinement . ? 2 SCALEPACK 'data scaling' . ? 3 # _cell.entry_id 1DNL _cell.length_a 63.71 _cell.length_b 63.71 _cell.length_c 125.25 _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1DNL _symmetry.space_group_name_H-M 'P 31 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 # _exptl.entry_id 1DNL _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.77 _exptl_crystal.density_percent_sol 55.2 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_details 'AMMONIUM FORMATE, HEPES OR MES, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type APS _diffrn_detector.pdbx_collection_date 1999-01-01 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.82944 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-ID _diffrn_source.pdbx_wavelength 0.82944 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1DNL _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 55.0 _reflns.d_resolution_high 1.8 _reflns.number_obs 26980 _reflns.number_all 26980 _reflns.percent_possible_obs 96.3 _reflns.pdbx_Rmerge_I_obs 0.0750000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 7.6 _reflns.B_iso_Wilson_estimate 16.1 _reflns.pdbx_redundancy 9.7 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.8 _reflns_shell.d_res_low 1.86 _reflns_shell.percent_possible_all 74.2 _reflns_shell.Rmerge_I_obs 0.3570000 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy 5.0 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 1DNL _refine.ls_number_reflns_obs 26936 _refine.ls_number_reflns_all 26936 _refine.pdbx_ls_sigma_I 0.0 _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF 1573005.61 _refine.ls_d_res_low 55.0 _refine.ls_d_res_high 1.8 _refine.ls_percent_reflns_obs 96.1 _refine.ls_R_factor_obs 0.2120000 _refine.ls_R_factor_all 0.2120000 _refine.ls_R_factor_R_work 0.2100000 _refine.ls_R_factor_R_free 0.2330000 _refine.ls_R_factor_R_free_error 0.006 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 1360 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean 25.40 _refine.aniso_B[1][1] 3.70 _refine.aniso_B[2][2] 3.70 _refine.aniso_B[3][3] -7.39 _refine.aniso_B[1][2] 1.72 _refine.aniso_B[1][3] 0.0 _refine.aniso_B[2][3] 0.0 _refine.solvent_model_details 'flat model' _refine.solvent_model_param_ksol 0.362461 _refine.solvent_model_param_bsol 43.517 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'USED BULK SOLVENT CORRECTION' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model restrained _refine.pdbx_stereochemistry_target_values 'ENGH & HUBER' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1DNL _refine_analyze.Luzzati_coordinate_error_obs 0.21 _refine_analyze.Luzzati_sigma_a_obs 0.17 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.25 _refine_analyze.Luzzati_sigma_a_free 0.16 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1642 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 36 _refine_hist.number_atoms_solvent 128 _refine_hist.number_atoms_total 1806 _refine_hist.d_res_high 1.8 _refine_hist.d_res_low 55.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.010 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.400 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 23.30 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.830 ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 1.35 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 2.24 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 1.92 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 2.89 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_restr_ncs.dom_id 1 _refine_ls_restr_ncs.ncs_model_details none _refine_ls_restr_ncs.rms_dev_position ? _refine_ls_restr_ncs.weight_position ? _refine_ls_restr_ncs.rms_dev_B_iso ? _refine_ls_restr_ncs.weight_B_iso ? _refine_ls_restr_ncs.pdbx_type . _refine_ls_restr_ncs.pdbx_auth_asym_id . _refine_ls_restr_ncs.pdbx_ens_id 1 _refine_ls_restr_ncs.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_restr_ncs.pdbx_ordinal 1 _refine_ls_restr_ncs.pdbx_number ? _refine_ls_restr_ncs.pdbx_asym_id ? _refine_ls_restr_ncs.pdbx_rms ? _refine_ls_restr_ncs.pdbx_weight ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 1.80 _refine_ls_shell.d_res_low 1.91 _refine_ls_shell.number_reflns_R_work 3415 _refine_ls_shell.R_factor_R_work 0.2740000 _refine_ls_shell.percent_reflns_obs 78.5 _refine_ls_shell.R_factor_R_free 0.2740000 _refine_ls_shell.R_factor_R_free_error 0.020 _refine_ls_shell.percent_reflns_R_free 5.1 _refine_ls_shell.number_reflns_R_free 182 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # _struct_ncs_dom.id 1 _struct_ncs_dom.pdbx_ens_id 1 _struct_ncs_dom.details ? # _struct_ncs_ens.id 1 _struct_ncs_ens.details ? # _database_PDB_matrix.entry_id 1DNL _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1DNL _struct.title ;X-RAY STRUCTURE OF ESCHERICHIA COLI PYRIDOXINE 5'-PHOSPHATE OXIDASE COMPLEXED WITH FMN AT 1.8 ANGSTROM RESOLUTION ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1DNL _struct_keywords.pdbx_keywords OXIDOREDUCTASE _struct_keywords.text 'BETA BARREL, PROTEIN-FMN COMPLEX, OXIDOREDUCTASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code PDXH_ECOLI _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession P28225 _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1DNL _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 199 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P28225 _struct_ref_seq.db_align_beg 19 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 217 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 20 _struct_ref_seq.pdbx_auth_seq_align_end 218 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1DNL MSE A 34 ? UNP P28225 MET 52 'modified residue' 53 1 1 1DNL MSE A 60 ? UNP P28225 MET 78 'modified residue' 79 2 1 1DNL MSE A 94 ? UNP P28225 MET 112 'modified residue' 113 3 1 1DNL MSE A 108 ? UNP P28225 MET 126 'modified residue' 127 4 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 7490 ? 1 MORE -36 ? 1 'SSA (A^2)' 17800 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 6_765 -x+2,-x+y+1,-z+1/3 -0.5000000000 -0.8660254038 0.0000000000 95.5650000000 -0.8660254038 0.5000000000 0.0000000000 55.1744784751 0.0000000000 0.0000000000 -1.0000000000 41.7500000000 # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO A 12 ? GLU A 25 ? PRO A 31 GLU A 44 1 ? 14 HELX_P HELX_P2 2 ARG A 69 ? ASN A 76 ? ARG A 88 ASN A 95 1 ? 8 HELX_P HELX_P3 3 THR A 104 ? PHE A 111 ? THR A 123 PHE A 130 1 ? 8 HELX_P HELX_P4 4 ARG A 116 ? VAL A 124 ? ARG A 135 VAL A 143 1 ? 9 HELX_P HELX_P5 5 GLY A 135 ? LYS A 147 ? GLY A 154 LYS A 166 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A ALA 33 C ? ? ? 1_555 A MSE 34 N ? ? A ALA 52 A MSE 53 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale2 covale both ? A MSE 34 C ? ? ? 1_555 A VAL 35 N ? ? A MSE 53 A VAL 54 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale3 covale both ? A GLY 59 C ? ? ? 1_555 A MSE 60 N ? ? A GLY 78 A MSE 79 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale4 covale both ? A MSE 60 C ? ? ? 1_555 A VAL 61 N ? ? A MSE 79 A VAL 80 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale5 covale both ? A VAL 93 C ? ? ? 1_555 A MSE 94 N ? ? A VAL 112 A MSE 113 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale6 covale both ? A MSE 94 C ? ? ? 1_555 A VAL 95 N ? ? A MSE 113 A VAL 114 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale7 covale both ? A VAL 107 C ? ? ? 1_555 A MSE 108 N ? ? A VAL 126 A MSE 127 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale8 covale both ? A MSE 108 C ? ? ? 1_555 A LYS 109 N ? ? A MSE 127 A LYS 128 1_555 ? ? ? ? ? ? ? 1.330 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 MSE A 34 ? . . . . MSE A 53 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 2 MSE A 60 ? . . . . MSE A 79 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 3 MSE A 94 ? . . . . MSE A 113 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 4 MSE A 108 ? . . . . MSE A 127 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 8 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TRP A 192 ? ARG A 196 ? TRP A 211 ARG A 215 A 2 ASP A 181 ? ARG A 187 ? ASP A 200 ARG A 206 A 3 TRP A 159 ? GLN A 173 ? TRP A 178 GLN A 192 A 4 ARG A 91 ? ARG A 101 ? ARG A 110 ARG A 120 A 5 ARG A 79 ? PHE A 84 ? ARG A 98 PHE A 103 A 6 ALA A 33 ? VAL A 39 ? ALA A 52 VAL A 58 A 7 PRO A 45 ? ASP A 56 ? PRO A 64 ASP A 75 A 8 GLY A 59 ? ASN A 65 ? GLY A 78 ASN A 84 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ASP A 195 ? O ASP A 214 N LEU A 184 ? N LEU A 203 A 2 3 N TYR A 185 ? N TYR A 204 O ARG A 163 ? O ARG A 182 A 3 4 N TRP A 172 ? N TRP A 191 O GLN A 92 ? O GLN A 111 A 4 5 O GLY A 97 ? O GLY A 116 N VAL A 80 ? N VAL A 99 A 5 6 O LEU A 83 ? O LEU A 102 N VAL A 35 ? N VAL A 54 A 6 7 O THR A 38 ? O THR A 57 N TYR A 46 ? N TYR A 65 A 7 8 N VAL A 164 ? N VAL A 183 O MSE A 60 ? O MSE A 79 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A PO4 275 ? 9 'BINDING SITE FOR RESIDUE PO4 A 275' AC2 Software A FMN 250 ? 17 'BINDING SITE FOR RESIDUE FMN A 250' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 9 ARG A 4 ? ARG A 23 . ? 1_555 ? 2 AC1 9 ARG A 5 ? ARG A 24 . ? 1_555 ? 3 AC1 9 ARG A 101 ? ARG A 120 . ? 2_755 ? 4 AC1 9 ALA A 133 ? ALA A 152 . ? 6_765 ? 5 AC1 9 ARG A 134 ? ARG A 153 . ? 6_765 ? 6 AC1 9 ARG A 196 ? ARG A 215 . ? 1_555 ? 7 AC1 9 HOH D . ? HOH A 313 . ? 1_555 ? 8 AC1 9 HOH D . ? HOH A 315 . ? 1_555 ? 9 AC1 9 HOH D . ? HOH A 339 . ? 6_765 ? 10 AC2 17 ARG A 48 ? ARG A 67 . ? 1_555 ? 11 AC2 17 ILE A 49 ? ILE A 68 . ? 1_555 ? 12 AC2 17 VAL A 50 ? VAL A 69 . ? 1_555 ? 13 AC2 17 LEU A 51 ? LEU A 70 . ? 1_555 ? 14 AC2 17 TYR A 63 ? TYR A 82 . ? 1_555 ? 15 AC2 17 THR A 64 ? THR A 83 . ? 1_555 ? 16 AC2 17 SER A 68 ? SER A 87 . ? 1_555 ? 17 AC2 17 ARG A 69 ? ARG A 88 . ? 1_555 ? 18 AC2 17 LYS A 70 ? LYS A 89 . ? 1_555 ? 19 AC2 17 GLN A 92 ? GLN A 111 . ? 6_765 ? 20 AC2 17 GLN A 127 ? GLN A 146 . ? 1_555 ? 21 AC2 17 SER A 128 ? SER A 147 . ? 1_555 ? 22 AC2 17 TRP A 172 ? TRP A 191 . ? 6_765 ? 23 AC2 17 ARG A 182 ? ARG A 201 . ? 6_765 ? 24 AC2 17 HOH D . ? HOH A 303 . ? 1_555 ? 25 AC2 17 HOH D . ? HOH A 307 . ? 1_555 ? 26 AC2 17 HOH D . ? HOH A 314 . ? 6_765 ? # _pdbx_entry_details.entry_id 1DNL _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 NE2 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 GLN _pdbx_validate_close_contact.auth_seq_id_1 205 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 412 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.19 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 405 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 405 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 6_765 _pdbx_validate_symm_contact.dist 2.00 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TRP A 105 ? ? -99.28 34.30 2 1 GLN A 146 ? ? -32.05 126.51 3 1 SER A 147 ? ? 80.71 -14.73 4 1 GLN A 168 ? ? 67.18 -5.27 5 1 GLU A 171 ? ? -170.13 -3.47 6 1 VAL A 172 ? ? 37.39 107.66 # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 34 A MSE 53 ? MET SELENOMETHIONINE 2 A MSE 60 A MSE 79 ? MET SELENOMETHIONINE 3 A MSE 94 A MSE 113 ? MET SELENOMETHIONINE 4 A MSE 108 A MSE 127 ? MET SELENOMETHIONINE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 FMN N1 N N N 88 FMN C2 C N N 89 FMN O2 O N N 90 FMN N3 N N N 91 FMN C4 C N N 92 FMN O4 O N N 93 FMN C4A C N N 94 FMN N5 N N N 95 FMN C5A C Y N 96 FMN C6 C Y N 97 FMN C7 C Y N 98 FMN C7M C N N 99 FMN C8 C Y N 100 FMN C8M C N N 101 FMN C9 C Y N 102 FMN C9A C Y N 103 FMN N10 N N N 104 FMN C10 C N N 105 FMN "C1'" C N N 106 FMN "C2'" C N S 107 FMN "O2'" O N N 108 FMN "C3'" C N S 109 FMN "O3'" O N N 110 FMN "C4'" C N R 111 FMN "O4'" O N N 112 FMN "C5'" C N N 113 FMN "O5'" O N N 114 FMN P P N N 115 FMN O1P O N N 116 FMN O2P O N N 117 FMN O3P O N N 118 FMN HN3 H N N 119 FMN H6 H N N 120 FMN HM71 H N N 121 FMN HM72 H N N 122 FMN HM73 H N N 123 FMN HM81 H N N 124 FMN HM82 H N N 125 FMN HM83 H N N 126 FMN H9 H N N 127 FMN "H1'1" H N N 128 FMN "H1'2" H N N 129 FMN "H2'" H N N 130 FMN "HO2'" H N N 131 FMN "H3'" H N N 132 FMN "HO3'" H N N 133 FMN "H4'" H N N 134 FMN "HO4'" H N N 135 FMN "H5'1" H N N 136 FMN "H5'2" H N N 137 FMN HOP2 H N N 138 FMN HOP3 H N N 139 GLN N N N N 140 GLN CA C N S 141 GLN C C N N 142 GLN O O N N 143 GLN CB C N N 144 GLN CG C N N 145 GLN CD C N N 146 GLN OE1 O N N 147 GLN NE2 N N N 148 GLN OXT O N N 149 GLN H H N N 150 GLN H2 H N N 151 GLN HA H N N 152 GLN HB2 H N N 153 GLN HB3 H N N 154 GLN HG2 H N N 155 GLN HG3 H N N 156 GLN HE21 H N N 157 GLN HE22 H N N 158 GLN HXT H N N 159 GLU N N N N 160 GLU CA C N S 161 GLU C C N N 162 GLU O O N N 163 GLU CB C N N 164 GLU CG C N N 165 GLU CD C N N 166 GLU OE1 O N N 167 GLU OE2 O N N 168 GLU OXT O N N 169 GLU H H N N 170 GLU H2 H N N 171 GLU HA H N N 172 GLU HB2 H N N 173 GLU HB3 H N N 174 GLU HG2 H N N 175 GLU HG3 H N N 176 GLU HE2 H N N 177 GLU HXT H N N 178 GLY N N N N 179 GLY CA C N N 180 GLY C C N N 181 GLY O O N N 182 GLY OXT O N N 183 GLY H H N N 184 GLY H2 H N N 185 GLY HA2 H N N 186 GLY HA3 H N N 187 GLY HXT H N N 188 HIS N N N N 189 HIS CA C N S 190 HIS C C N N 191 HIS O O N N 192 HIS CB C N N 193 HIS CG C Y N 194 HIS ND1 N Y N 195 HIS CD2 C Y N 196 HIS CE1 C Y N 197 HIS NE2 N Y N 198 HIS OXT O N N 199 HIS H H N N 200 HIS H2 H N N 201 HIS HA H N N 202 HIS HB2 H N N 203 HIS HB3 H N N 204 HIS HD1 H N N 205 HIS HD2 H N N 206 HIS HE1 H N N 207 HIS HE2 H N N 208 HIS HXT H N N 209 HOH O O N N 210 HOH H1 H N N 211 HOH H2 H N N 212 ILE N N N N 213 ILE CA C N S 214 ILE C C N N 215 ILE O O N N 216 ILE CB C N S 217 ILE CG1 C N N 218 ILE CG2 C N N 219 ILE CD1 C N N 220 ILE OXT O N N 221 ILE H H N N 222 ILE H2 H N N 223 ILE HA H N N 224 ILE HB H N N 225 ILE HG12 H N N 226 ILE HG13 H N N 227 ILE HG21 H N N 228 ILE HG22 H N N 229 ILE HG23 H N N 230 ILE HD11 H N N 231 ILE HD12 H N N 232 ILE HD13 H N N 233 ILE HXT H N N 234 LEU N N N N 235 LEU CA C N S 236 LEU C C N N 237 LEU O O N N 238 LEU CB C N N 239 LEU CG C N N 240 LEU CD1 C N N 241 LEU CD2 C N N 242 LEU OXT O N N 243 LEU H H N N 244 LEU H2 H N N 245 LEU HA H N N 246 LEU HB2 H N N 247 LEU HB3 H N N 248 LEU HG H N N 249 LEU HD11 H N N 250 LEU HD12 H N N 251 LEU HD13 H N N 252 LEU HD21 H N N 253 LEU HD22 H N N 254 LEU HD23 H N N 255 LEU HXT H N N 256 LYS N N N N 257 LYS CA C N S 258 LYS C C N N 259 LYS O O N N 260 LYS CB C N N 261 LYS CG C N N 262 LYS CD C N N 263 LYS CE C N N 264 LYS NZ N N N 265 LYS OXT O N N 266 LYS H H N N 267 LYS H2 H N N 268 LYS HA H N N 269 LYS HB2 H N N 270 LYS HB3 H N N 271 LYS HG2 H N N 272 LYS HG3 H N N 273 LYS HD2 H N N 274 LYS HD3 H N N 275 LYS HE2 H N N 276 LYS HE3 H N N 277 LYS HZ1 H N N 278 LYS HZ2 H N N 279 LYS HZ3 H N N 280 LYS HXT H N N 281 MET N N N N 282 MET CA C N S 283 MET C C N N 284 MET O O N N 285 MET CB C N N 286 MET CG C N N 287 MET SD S N N 288 MET CE C N N 289 MET OXT O N N 290 MET H H N N 291 MET H2 H N N 292 MET HA H N N 293 MET HB2 H N N 294 MET HB3 H N N 295 MET HG2 H N N 296 MET HG3 H N N 297 MET HE1 H N N 298 MET HE2 H N N 299 MET HE3 H N N 300 MET HXT H N N 301 MSE N N N N 302 MSE CA C N S 303 MSE C C N N 304 MSE O O N N 305 MSE OXT O N N 306 MSE CB C N N 307 MSE CG C N N 308 MSE SE SE N N 309 MSE CE C N N 310 MSE H H N N 311 MSE H2 H N N 312 MSE HA H N N 313 MSE HXT H N N 314 MSE HB2 H N N 315 MSE HB3 H N N 316 MSE HG2 H N N 317 MSE HG3 H N N 318 MSE HE1 H N N 319 MSE HE2 H N N 320 MSE HE3 H N N 321 PHE N N N N 322 PHE CA C N S 323 PHE C C N N 324 PHE O O N N 325 PHE CB C N N 326 PHE CG C Y N 327 PHE CD1 C Y N 328 PHE CD2 C Y N 329 PHE CE1 C Y N 330 PHE CE2 C Y N 331 PHE CZ C Y N 332 PHE OXT O N N 333 PHE H H N N 334 PHE H2 H N N 335 PHE HA H N N 336 PHE HB2 H N N 337 PHE HB3 H N N 338 PHE HD1 H N N 339 PHE HD2 H N N 340 PHE HE1 H N N 341 PHE HE2 H N N 342 PHE HZ H N N 343 PHE HXT H N N 344 PO4 P P N N 345 PO4 O1 O N N 346 PO4 O2 O N N 347 PO4 O3 O N N 348 PO4 O4 O N N 349 PRO N N N N 350 PRO CA C N S 351 PRO C C N N 352 PRO O O N N 353 PRO CB C N N 354 PRO CG C N N 355 PRO CD C N N 356 PRO OXT O N N 357 PRO H H N N 358 PRO HA H N N 359 PRO HB2 H N N 360 PRO HB3 H N N 361 PRO HG2 H N N 362 PRO HG3 H N N 363 PRO HD2 H N N 364 PRO HD3 H N N 365 PRO HXT H N N 366 SER N N N N 367 SER CA C N S 368 SER C C N N 369 SER O O N N 370 SER CB C N N 371 SER OG O N N 372 SER OXT O N N 373 SER H H N N 374 SER H2 H N N 375 SER HA H N N 376 SER HB2 H N N 377 SER HB3 H N N 378 SER HG H N N 379 SER HXT H N N 380 THR N N N N 381 THR CA C N S 382 THR C C N N 383 THR O O N N 384 THR CB C N R 385 THR OG1 O N N 386 THR CG2 C N N 387 THR OXT O N N 388 THR H H N N 389 THR H2 H N N 390 THR HA H N N 391 THR HB H N N 392 THR HG1 H N N 393 THR HG21 H N N 394 THR HG22 H N N 395 THR HG23 H N N 396 THR HXT H N N 397 TRP N N N N 398 TRP CA C N S 399 TRP C C N N 400 TRP O O N N 401 TRP CB C N N 402 TRP CG C Y N 403 TRP CD1 C Y N 404 TRP CD2 C Y N 405 TRP NE1 N Y N 406 TRP CE2 C Y N 407 TRP CE3 C Y N 408 TRP CZ2 C Y N 409 TRP CZ3 C Y N 410 TRP CH2 C Y N 411 TRP OXT O N N 412 TRP H H N N 413 TRP H2 H N N 414 TRP HA H N N 415 TRP HB2 H N N 416 TRP HB3 H N N 417 TRP HD1 H N N 418 TRP HE1 H N N 419 TRP HE3 H N N 420 TRP HZ2 H N N 421 TRP HZ3 H N N 422 TRP HH2 H N N 423 TRP HXT H N N 424 TYR N N N N 425 TYR CA C N S 426 TYR C C N N 427 TYR O O N N 428 TYR CB C N N 429 TYR CG C Y N 430 TYR CD1 C Y N 431 TYR CD2 C Y N 432 TYR CE1 C Y N 433 TYR CE2 C Y N 434 TYR CZ C Y N 435 TYR OH O N N 436 TYR OXT O N N 437 TYR H H N N 438 TYR H2 H N N 439 TYR HA H N N 440 TYR HB2 H N N 441 TYR HB3 H N N 442 TYR HD1 H N N 443 TYR HD2 H N N 444 TYR HE1 H N N 445 TYR HE2 H N N 446 TYR HH H N N 447 TYR HXT H N N 448 VAL N N N N 449 VAL CA C N S 450 VAL C C N N 451 VAL O O N N 452 VAL CB C N N 453 VAL CG1 C N N 454 VAL CG2 C N N 455 VAL OXT O N N 456 VAL H H N N 457 VAL H2 H N N 458 VAL HA H N N 459 VAL HB H N N 460 VAL HG11 H N N 461 VAL HG12 H N N 462 VAL HG13 H N N 463 VAL HG21 H N N 464 VAL HG22 H N N 465 VAL HG23 H N N 466 VAL HXT H N N 467 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 FMN N1 C2 sing N N 83 FMN N1 C10 doub N N 84 FMN C2 O2 doub N N 85 FMN C2 N3 sing N N 86 FMN N3 C4 sing N N 87 FMN N3 HN3 sing N N 88 FMN C4 O4 doub N N 89 FMN C4 C4A sing N N 90 FMN C4A N5 doub N N 91 FMN C4A C10 sing N N 92 FMN N5 C5A sing N N 93 FMN C5A C6 doub Y N 94 FMN C5A C9A sing Y N 95 FMN C6 C7 sing Y N 96 FMN C6 H6 sing N N 97 FMN C7 C7M sing N N 98 FMN C7 C8 doub Y N 99 FMN C7M HM71 sing N N 100 FMN C7M HM72 sing N N 101 FMN C7M HM73 sing N N 102 FMN C8 C8M sing N N 103 FMN C8 C9 sing Y N 104 FMN C8M HM81 sing N N 105 FMN C8M HM82 sing N N 106 FMN C8M HM83 sing N N 107 FMN C9 C9A doub Y N 108 FMN C9 H9 sing N N 109 FMN C9A N10 sing N N 110 FMN N10 C10 sing N N 111 FMN N10 "C1'" sing N N 112 FMN "C1'" "C2'" sing N N 113 FMN "C1'" "H1'1" sing N N 114 FMN "C1'" "H1'2" sing N N 115 FMN "C2'" "O2'" sing N N 116 FMN "C2'" "C3'" sing N N 117 FMN "C2'" "H2'" sing N N 118 FMN "O2'" "HO2'" sing N N 119 FMN "C3'" "O3'" sing N N 120 FMN "C3'" "C4'" sing N N 121 FMN "C3'" "H3'" sing N N 122 FMN "O3'" "HO3'" sing N N 123 FMN "C4'" "O4'" sing N N 124 FMN "C4'" "C5'" sing N N 125 FMN "C4'" "H4'" sing N N 126 FMN "O4'" "HO4'" sing N N 127 FMN "C5'" "O5'" sing N N 128 FMN "C5'" "H5'1" sing N N 129 FMN "C5'" "H5'2" sing N N 130 FMN "O5'" P sing N N 131 FMN P O1P doub N N 132 FMN P O2P sing N N 133 FMN P O3P sing N N 134 FMN O2P HOP2 sing N N 135 FMN O3P HOP3 sing N N 136 GLN N CA sing N N 137 GLN N H sing N N 138 GLN N H2 sing N N 139 GLN CA C sing N N 140 GLN CA CB sing N N 141 GLN CA HA sing N N 142 GLN C O doub N N 143 GLN C OXT sing N N 144 GLN CB CG sing N N 145 GLN CB HB2 sing N N 146 GLN CB HB3 sing N N 147 GLN CG CD sing N N 148 GLN CG HG2 sing N N 149 GLN CG HG3 sing N N 150 GLN CD OE1 doub N N 151 GLN CD NE2 sing N N 152 GLN NE2 HE21 sing N N 153 GLN NE2 HE22 sing N N 154 GLN OXT HXT sing N N 155 GLU N CA sing N N 156 GLU N H sing N N 157 GLU N H2 sing N N 158 GLU CA C sing N N 159 GLU CA CB sing N N 160 GLU CA HA sing N N 161 GLU C O doub N N 162 GLU C OXT sing N N 163 GLU CB CG sing N N 164 GLU CB HB2 sing N N 165 GLU CB HB3 sing N N 166 GLU CG CD sing N N 167 GLU CG HG2 sing N N 168 GLU CG HG3 sing N N 169 GLU CD OE1 doub N N 170 GLU CD OE2 sing N N 171 GLU OE2 HE2 sing N N 172 GLU OXT HXT sing N N 173 GLY N CA sing N N 174 GLY N H sing N N 175 GLY N H2 sing N N 176 GLY CA C sing N N 177 GLY CA HA2 sing N N 178 GLY CA HA3 sing N N 179 GLY C O doub N N 180 GLY C OXT sing N N 181 GLY OXT HXT sing N N 182 HIS N CA sing N N 183 HIS N H sing N N 184 HIS N H2 sing N N 185 HIS CA C sing N N 186 HIS CA CB sing N N 187 HIS CA HA sing N N 188 HIS C O doub N N 189 HIS C OXT sing N N 190 HIS CB CG sing N N 191 HIS CB HB2 sing N N 192 HIS CB HB3 sing N N 193 HIS CG ND1 sing Y N 194 HIS CG CD2 doub Y N 195 HIS ND1 CE1 doub Y N 196 HIS ND1 HD1 sing N N 197 HIS CD2 NE2 sing Y N 198 HIS CD2 HD2 sing N N 199 HIS CE1 NE2 sing Y N 200 HIS CE1 HE1 sing N N 201 HIS NE2 HE2 sing N N 202 HIS OXT HXT sing N N 203 HOH O H1 sing N N 204 HOH O H2 sing N N 205 ILE N CA sing N N 206 ILE N H sing N N 207 ILE N H2 sing N N 208 ILE CA C sing N N 209 ILE CA CB sing N N 210 ILE CA HA sing N N 211 ILE C O doub N N 212 ILE C OXT sing N N 213 ILE CB CG1 sing N N 214 ILE CB CG2 sing N N 215 ILE CB HB sing N N 216 ILE CG1 CD1 sing N N 217 ILE CG1 HG12 sing N N 218 ILE CG1 HG13 sing N N 219 ILE CG2 HG21 sing N N 220 ILE CG2 HG22 sing N N 221 ILE CG2 HG23 sing N N 222 ILE CD1 HD11 sing N N 223 ILE CD1 HD12 sing N N 224 ILE CD1 HD13 sing N N 225 ILE OXT HXT sing N N 226 LEU N CA sing N N 227 LEU N H sing N N 228 LEU N H2 sing N N 229 LEU CA C sing N N 230 LEU CA CB sing N N 231 LEU CA HA sing N N 232 LEU C O doub N N 233 LEU C OXT sing N N 234 LEU CB CG sing N N 235 LEU CB HB2 sing N N 236 LEU CB HB3 sing N N 237 LEU CG CD1 sing N N 238 LEU CG CD2 sing N N 239 LEU CG HG sing N N 240 LEU CD1 HD11 sing N N 241 LEU CD1 HD12 sing N N 242 LEU CD1 HD13 sing N N 243 LEU CD2 HD21 sing N N 244 LEU CD2 HD22 sing N N 245 LEU CD2 HD23 sing N N 246 LEU OXT HXT sing N N 247 LYS N CA sing N N 248 LYS N H sing N N 249 LYS N H2 sing N N 250 LYS CA C sing N N 251 LYS CA CB sing N N 252 LYS CA HA sing N N 253 LYS C O doub N N 254 LYS C OXT sing N N 255 LYS CB CG sing N N 256 LYS CB HB2 sing N N 257 LYS CB HB3 sing N N 258 LYS CG CD sing N N 259 LYS CG HG2 sing N N 260 LYS CG HG3 sing N N 261 LYS CD CE sing N N 262 LYS CD HD2 sing N N 263 LYS CD HD3 sing N N 264 LYS CE NZ sing N N 265 LYS CE HE2 sing N N 266 LYS CE HE3 sing N N 267 LYS NZ HZ1 sing N N 268 LYS NZ HZ2 sing N N 269 LYS NZ HZ3 sing N N 270 LYS OXT HXT sing N N 271 MET N CA sing N N 272 MET N H sing N N 273 MET N H2 sing N N 274 MET CA C sing N N 275 MET CA CB sing N N 276 MET CA HA sing N N 277 MET C O doub N N 278 MET C OXT sing N N 279 MET CB CG sing N N 280 MET CB HB2 sing N N 281 MET CB HB3 sing N N 282 MET CG SD sing N N 283 MET CG HG2 sing N N 284 MET CG HG3 sing N N 285 MET SD CE sing N N 286 MET CE HE1 sing N N 287 MET CE HE2 sing N N 288 MET CE HE3 sing N N 289 MET OXT HXT sing N N 290 MSE N CA sing N N 291 MSE N H sing N N 292 MSE N H2 sing N N 293 MSE CA C sing N N 294 MSE CA CB sing N N 295 MSE CA HA sing N N 296 MSE C O doub N N 297 MSE C OXT sing N N 298 MSE OXT HXT sing N N 299 MSE CB CG sing N N 300 MSE CB HB2 sing N N 301 MSE CB HB3 sing N N 302 MSE CG SE sing N N 303 MSE CG HG2 sing N N 304 MSE CG HG3 sing N N 305 MSE SE CE sing N N 306 MSE CE HE1 sing N N 307 MSE CE HE2 sing N N 308 MSE CE HE3 sing N N 309 PHE N CA sing N N 310 PHE N H sing N N 311 PHE N H2 sing N N 312 PHE CA C sing N N 313 PHE CA CB sing N N 314 PHE CA HA sing N N 315 PHE C O doub N N 316 PHE C OXT sing N N 317 PHE CB CG sing N N 318 PHE CB HB2 sing N N 319 PHE CB HB3 sing N N 320 PHE CG CD1 doub Y N 321 PHE CG CD2 sing Y N 322 PHE CD1 CE1 sing Y N 323 PHE CD1 HD1 sing N N 324 PHE CD2 CE2 doub Y N 325 PHE CD2 HD2 sing N N 326 PHE CE1 CZ doub Y N 327 PHE CE1 HE1 sing N N 328 PHE CE2 CZ sing Y N 329 PHE CE2 HE2 sing N N 330 PHE CZ HZ sing N N 331 PHE OXT HXT sing N N 332 PO4 P O1 doub N N 333 PO4 P O2 sing N N 334 PO4 P O3 sing N N 335 PO4 P O4 sing N N 336 PRO N CA sing N N 337 PRO N CD sing N N 338 PRO N H sing N N 339 PRO CA C sing N N 340 PRO CA CB sing N N 341 PRO CA HA sing N N 342 PRO C O doub N N 343 PRO C OXT sing N N 344 PRO CB CG sing N N 345 PRO CB HB2 sing N N 346 PRO CB HB3 sing N N 347 PRO CG CD sing N N 348 PRO CG HG2 sing N N 349 PRO CG HG3 sing N N 350 PRO CD HD2 sing N N 351 PRO CD HD3 sing N N 352 PRO OXT HXT sing N N 353 SER N CA sing N N 354 SER N H sing N N 355 SER N H2 sing N N 356 SER CA C sing N N 357 SER CA CB sing N N 358 SER CA HA sing N N 359 SER C O doub N N 360 SER C OXT sing N N 361 SER CB OG sing N N 362 SER CB HB2 sing N N 363 SER CB HB3 sing N N 364 SER OG HG sing N N 365 SER OXT HXT sing N N 366 THR N CA sing N N 367 THR N H sing N N 368 THR N H2 sing N N 369 THR CA C sing N N 370 THR CA CB sing N N 371 THR CA HA sing N N 372 THR C O doub N N 373 THR C OXT sing N N 374 THR CB OG1 sing N N 375 THR CB CG2 sing N N 376 THR CB HB sing N N 377 THR OG1 HG1 sing N N 378 THR CG2 HG21 sing N N 379 THR CG2 HG22 sing N N 380 THR CG2 HG23 sing N N 381 THR OXT HXT sing N N 382 TRP N CA sing N N 383 TRP N H sing N N 384 TRP N H2 sing N N 385 TRP CA C sing N N 386 TRP CA CB sing N N 387 TRP CA HA sing N N 388 TRP C O doub N N 389 TRP C OXT sing N N 390 TRP CB CG sing N N 391 TRP CB HB2 sing N N 392 TRP CB HB3 sing N N 393 TRP CG CD1 doub Y N 394 TRP CG CD2 sing Y N 395 TRP CD1 NE1 sing Y N 396 TRP CD1 HD1 sing N N 397 TRP CD2 CE2 doub Y N 398 TRP CD2 CE3 sing Y N 399 TRP NE1 CE2 sing Y N 400 TRP NE1 HE1 sing N N 401 TRP CE2 CZ2 sing Y N 402 TRP CE3 CZ3 doub Y N 403 TRP CE3 HE3 sing N N 404 TRP CZ2 CH2 doub Y N 405 TRP CZ2 HZ2 sing N N 406 TRP CZ3 CH2 sing Y N 407 TRP CZ3 HZ3 sing N N 408 TRP CH2 HH2 sing N N 409 TRP OXT HXT sing N N 410 TYR N CA sing N N 411 TYR N H sing N N 412 TYR N H2 sing N N 413 TYR CA C sing N N 414 TYR CA CB sing N N 415 TYR CA HA sing N N 416 TYR C O doub N N 417 TYR C OXT sing N N 418 TYR CB CG sing N N 419 TYR CB HB2 sing N N 420 TYR CB HB3 sing N N 421 TYR CG CD1 doub Y N 422 TYR CG CD2 sing Y N 423 TYR CD1 CE1 sing Y N 424 TYR CD1 HD1 sing N N 425 TYR CD2 CE2 doub Y N 426 TYR CD2 HD2 sing N N 427 TYR CE1 CZ doub Y N 428 TYR CE1 HE1 sing N N 429 TYR CE2 CZ sing Y N 430 TYR CE2 HE2 sing N N 431 TYR CZ OH sing N N 432 TYR OH HH sing N N 433 TYR OXT HXT sing N N 434 VAL N CA sing N N 435 VAL N H sing N N 436 VAL N H2 sing N N 437 VAL CA C sing N N 438 VAL CA CB sing N N 439 VAL CA HA sing N N 440 VAL C O doub N N 441 VAL C OXT sing N N 442 VAL CB CG1 sing N N 443 VAL CB CG2 sing N N 444 VAL CB HB sing N N 445 VAL CG1 HG11 sing N N 446 VAL CG1 HG12 sing N N 447 VAL CG1 HG13 sing N N 448 VAL CG2 HG21 sing N N 449 VAL CG2 HG22 sing N N 450 VAL CG2 HG23 sing N N 451 VAL OXT HXT sing N N 452 # _atom_sites.entry_id 1DNL _atom_sites.fract_transf_matrix[1][1] 0.015696 _atom_sites.fract_transf_matrix[1][2] 0.009062 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018124 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007984 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S SE # loop_