data_1DOJ # _entry.id 1DOJ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1DOJ pdb_00001doj 10.2210/pdb1doj/pdb RCSB RCSB010249 ? ? WWPDB D_1000010249 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2000-11-03 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2012-12-12 5 'Structure model' 1 4 2020-07-29 6 'Structure model' 1 5 2024-03-13 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 5 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Atomic model' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Non-polymer description' 6 3 'Structure model' 'Structure summary' 7 3 'Structure model' 'Version format compliance' 8 4 'Structure model' Other 9 5 'Structure model' Advisory 10 5 'Structure model' 'Data collection' 11 5 'Structure model' 'Derived calculations' 12 5 'Structure model' 'Structure summary' 13 6 'Structure model' 'Data collection' 14 6 'Structure model' 'Database references' 15 6 'Structure model' 'Source and taxonomy' 16 6 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' chem_comp 2 5 'Structure model' database_PDB_caveat 3 5 'Structure model' entity 4 5 'Structure model' pdbx_chem_comp_identifier 5 5 'Structure model' pdbx_entity_nonpoly 6 5 'Structure model' pdbx_struct_conn_angle 7 5 'Structure model' struct_conn 8 5 'Structure model' struct_site 9 5 'Structure model' struct_site_gen 10 6 'Structure model' chem_comp 11 6 'Structure model' chem_comp_atom 12 6 'Structure model' chem_comp_bond 13 6 'Structure model' database_2 14 6 'Structure model' entity 15 6 'Structure model' pdbx_entity_src_syn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_chem_comp.name' 2 5 'Structure model' '_chem_comp.type' 3 5 'Structure model' '_entity.pdbx_description' 4 5 'Structure model' '_pdbx_entity_nonpoly.name' 5 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 7 5 'Structure model' '_pdbx_struct_conn_angle.value' 8 5 'Structure model' '_struct_conn.conn_type_id' 9 5 'Structure model' '_struct_conn.id' 10 5 'Structure model' '_struct_conn.pdbx_dist_value' 11 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 12 5 'Structure model' '_struct_conn.pdbx_ptnr1_PDB_ins_code' 13 5 'Structure model' '_struct_conn.pdbx_role' 14 5 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 15 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 16 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 17 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 18 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 19 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 20 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 21 5 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 22 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 23 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 24 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 25 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 26 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 27 5 'Structure model' '_struct_conn.ptnr2_label_seq_id' 28 6 'Structure model' '_chem_comp.pdbx_synonyms' 29 6 'Structure model' '_database_2.pdbx_DOI' 30 6 'Structure model' '_database_2.pdbx_database_accession' 31 6 'Structure model' '_entity.details' # loop_ _database_PDB_caveat.id _database_PDB_caveat.text 1 'NAG A 250 HAS WRONG CHIRALITY AT ATOM C2' 2 'NAG A 250 HAS WRONG CHIRALITY AT ATOM C3' 3 'NAG A 250 HAS WRONG CHIRALITY AT ATOM C4' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1DOJ _pdbx_database_status.recvd_initial_deposition_date 1999-12-21 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1abj _pdbx_database_related.details 'contains the same protein complexed with D-PHE-PRO-ARG chloromethylketone (PPACK)' _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Recacha, R.' 1 'Costanzo, M.J.' 2 'Maryanoff, B.E.' 3 'Carson, M.' 4 'DeLucas, L.' 5 'Chattopadhyay, D.' 6 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Structure of human alpha-thrombin complexed with RWJ-51438 at 1.7 A: unusual perturbation of the 60A-60I insertion loop.' 'Acta Crystallogr.,Sect.D' 56 1395 1400 2000 ABCRE6 DK 0907-4449 0766 ? 11053836 10.1107/S0907444900010763 1 ;Structure of the Hirulog 3-Thrombin Complex and Nature of the S' Subsites of Substrates and Inhibitors ; Biochemistry 31 11689 11697 1992 BICHAW US 0006-2960 0033 ? ? ? 2 ;Crystal Structure of Thrombin with Thiazole-Containing Inhibitors: Probes of the S1' Binding Site ; Biophys.J. 71 2830 2839 1996 BIOJAU US 0006-3495 0030 ? ? ? 3 ;The Refined 1.9-A X-ray Crystal Structure of D-Pro-Phe-Arg Chloromethylketone-Inhibited Human Alpha-Thrombin: Structure Analysis, Overall Structure, Electrostatic Properties, Detailed Active-Site Geometry, and Structure-Function Relationships ; 'Protein Sci.' 1 426 471 1992 PRCIEI US 0961-8368 0795 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Recacha, R.' 1 ? primary 'Costanzo, M.J.' 2 ? primary 'Maryanoff, B.E.' 3 ? primary 'Carson, M.' 4 ? primary 'DeLucas, L.' 5 ? primary 'Chattopadhyay, D.' 6 ? 1 'Qiu, X.' 7 ? 1 'Padmanabhan, K.P.' 8 ? 1 'Carperos, V.E.' 9 ? 1 'Tulinsky, A.' 10 ? 1 'Kline, T.' 11 ? 1 'Maraganore, J.M.' 12 ? 1 'Fenton II, J.W.' 13 ? 2 'Matthews, J.H.' 14 ? 2 'Krishnan, R.' 15 ? 2 'Costanzo, M.J.' 16 ? 2 'Maryanoff, B.E.' 17 ? 2 'Tulinsky, A.' 18 ? 3 'Bode, W.' 19 ? 3 'Turk, D.' 20 ? 3 'Karshikov, A.' 21 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat ALPHA-THROMBIN 33858.730 1 3.4.21.5 ? ? ? 2 polymer syn HIRUGEN 1491.528 1 ? ? 'FRAGMENT OF HIRUDIN' ? 3 non-polymer syn 'N-methyl-D-phenylalanyl-N-{(1S)-4-carbamimidamido-1-[(6-carboxy-1,3-benzothiazol-2-yl)carbonyl]butyl}-L-prolinamide' 593.697 1 ? ? ? 'RWJ-51438 IS JOINED COVALENTLY TO SER195 OF HUMAN ALPHA-THROMBIN RWJ-51438 was chemically synthesized' 4 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 1 ? ? ? ? 5 non-polymer syn 'SODIUM ION' 22.990 2 ? ? ? ? 6 water nat water 18.015 349 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;TFGSGEADCGLRPLFEKKSLEDKTERELLESYIDGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHC LLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRE TAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGD SGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQFGE ; ;TFGSGEADCGLRPLFEKKSLEDKTERELLESYIDGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHC LLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRE TAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGD SGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQFGE ; A ? 2 'polypeptide(L)' no yes 'DFEEIPEE(TYS)LQ' DFEEIPEEYLQ B ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'N-methyl-D-phenylalanyl-N-{(1S)-4-carbamimidamido-1-[(6-carboxy-1,3-benzothiazol-2-yl)carbonyl]butyl}-L-prolinamide' 1Z0 4 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 5 'SODIUM ION' NA 6 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 THR n 1 2 PHE n 1 3 GLY n 1 4 SER n 1 5 GLY n 1 6 GLU n 1 7 ALA n 1 8 ASP n 1 9 CYS n 1 10 GLY n 1 11 LEU n 1 12 ARG n 1 13 PRO n 1 14 LEU n 1 15 PHE n 1 16 GLU n 1 17 LYS n 1 18 LYS n 1 19 SER n 1 20 LEU n 1 21 GLU n 1 22 ASP n 1 23 LYS n 1 24 THR n 1 25 GLU n 1 26 ARG n 1 27 GLU n 1 28 LEU n 1 29 LEU n 1 30 GLU n 1 31 SER n 1 32 TYR n 1 33 ILE n 1 34 ASP n 1 35 GLY n 1 36 ARG n 1 37 ILE n 1 38 VAL n 1 39 GLU n 1 40 GLY n 1 41 SER n 1 42 ASP n 1 43 ALA n 1 44 GLU n 1 45 ILE n 1 46 GLY n 1 47 MET n 1 48 SER n 1 49 PRO n 1 50 TRP n 1 51 GLN n 1 52 VAL n 1 53 MET n 1 54 LEU n 1 55 PHE n 1 56 ARG n 1 57 LYS n 1 58 SER n 1 59 PRO n 1 60 GLN n 1 61 GLU n 1 62 LEU n 1 63 LEU n 1 64 CYS n 1 65 GLY n 1 66 ALA n 1 67 SER n 1 68 LEU n 1 69 ILE n 1 70 SER n 1 71 ASP n 1 72 ARG n 1 73 TRP n 1 74 VAL n 1 75 LEU n 1 76 THR n 1 77 ALA n 1 78 ALA n 1 79 HIS n 1 80 CYS n 1 81 LEU n 1 82 LEU n 1 83 TYR n 1 84 PRO n 1 85 PRO n 1 86 TRP n 1 87 ASP n 1 88 LYS n 1 89 ASN n 1 90 PHE n 1 91 THR n 1 92 GLU n 1 93 ASN n 1 94 ASP n 1 95 LEU n 1 96 LEU n 1 97 VAL n 1 98 ARG n 1 99 ILE n 1 100 GLY n 1 101 LYS n 1 102 HIS n 1 103 SER n 1 104 ARG n 1 105 THR n 1 106 ARG n 1 107 TYR n 1 108 GLU n 1 109 ARG n 1 110 ASN n 1 111 ILE n 1 112 GLU n 1 113 LYS n 1 114 ILE n 1 115 SER n 1 116 MET n 1 117 LEU n 1 118 GLU n 1 119 LYS n 1 120 ILE n 1 121 TYR n 1 122 ILE n 1 123 HIS n 1 124 PRO n 1 125 ARG n 1 126 TYR n 1 127 ASN n 1 128 TRP n 1 129 ARG n 1 130 GLU n 1 131 ASN n 1 132 LEU n 1 133 ASP n 1 134 ARG n 1 135 ASP n 1 136 ILE n 1 137 ALA n 1 138 LEU n 1 139 MET n 1 140 LYS n 1 141 LEU n 1 142 LYS n 1 143 LYS n 1 144 PRO n 1 145 VAL n 1 146 ALA n 1 147 PHE n 1 148 SER n 1 149 ASP n 1 150 TYR n 1 151 ILE n 1 152 HIS n 1 153 PRO n 1 154 VAL n 1 155 CYS n 1 156 LEU n 1 157 PRO n 1 158 ASP n 1 159 ARG n 1 160 GLU n 1 161 THR n 1 162 ALA n 1 163 ALA n 1 164 SER n 1 165 LEU n 1 166 LEU n 1 167 GLN n 1 168 ALA n 1 169 GLY n 1 170 TYR n 1 171 LYS n 1 172 GLY n 1 173 ARG n 1 174 VAL n 1 175 THR n 1 176 GLY n 1 177 TRP n 1 178 GLY n 1 179 ASN n 1 180 LEU n 1 181 LYS n 1 182 GLU n 1 183 THR n 1 184 TRP n 1 185 THR n 1 186 ALA n 1 187 ASN n 1 188 VAL n 1 189 GLY n 1 190 LYS n 1 191 GLY n 1 192 GLN n 1 193 PRO n 1 194 SER n 1 195 VAL n 1 196 LEU n 1 197 GLN n 1 198 VAL n 1 199 VAL n 1 200 ASN n 1 201 LEU n 1 202 PRO n 1 203 ILE n 1 204 VAL n 1 205 GLU n 1 206 ARG n 1 207 PRO n 1 208 VAL n 1 209 CYS n 1 210 LYS n 1 211 ASP n 1 212 SER n 1 213 THR n 1 214 ARG n 1 215 ILE n 1 216 ARG n 1 217 ILE n 1 218 THR n 1 219 ASP n 1 220 ASN n 1 221 MET n 1 222 PHE n 1 223 CYS n 1 224 ALA n 1 225 GLY n 1 226 TYR n 1 227 LYS n 1 228 PRO n 1 229 ASP n 1 230 GLU n 1 231 GLY n 1 232 LYS n 1 233 ARG n 1 234 GLY n 1 235 ASP n 1 236 ALA n 1 237 CYS n 1 238 GLU n 1 239 GLY n 1 240 ASP n 1 241 SER n 1 242 GLY n 1 243 GLY n 1 244 PRO n 1 245 PHE n 1 246 VAL n 1 247 MET n 1 248 LYS n 1 249 SER n 1 250 PRO n 1 251 PHE n 1 252 ASN n 1 253 ASN n 1 254 ARG n 1 255 TRP n 1 256 TYR n 1 257 GLN n 1 258 MET n 1 259 GLY n 1 260 ILE n 1 261 VAL n 1 262 SER n 1 263 TRP n 1 264 GLY n 1 265 GLU n 1 266 GLY n 1 267 CYS n 1 268 ASP n 1 269 ARG n 1 270 ASP n 1 271 GLY n 1 272 LYS n 1 273 TYR n 1 274 GLY n 1 275 PHE n 1 276 TYR n 1 277 THR n 1 278 HIS n 1 279 VAL n 1 280 PHE n 1 281 ARG n 1 282 LEU n 1 283 LYS n 1 284 LYS n 1 285 TRP n 1 286 ILE n 1 287 GLN n 1 288 LYS n 1 289 VAL n 1 290 ILE n 1 291 ASP n 1 292 GLN n 1 293 PHE n 1 294 GLY n 1 295 GLU n 2 1 ASP n 2 2 PHE n 2 3 GLU n 2 4 GLU n 2 5 ILE n 2 6 PRO n 2 7 GLU n 2 8 GLU n 2 9 TYS n 2 10 LEU n 2 11 GLN n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name human _entity_src_nat.pdbx_organism_scientific 'Homo sapiens' _entity_src_nat.pdbx_ncbi_taxonomy_id 9606 _entity_src_nat.genus Homo _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location PLASMA _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'Hirugen, comes from hirudin' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 1Z0 peptide-like . 'N-methyl-D-phenylalanyl-N-{(1S)-4-carbamimidamido-1-[(6-carboxy-1,3-benzothiazol-2-yl)carbonyl]butyl}-L-prolinamide' RWJ-51438 'C29 H35 N7 O5 S' 593.697 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 TYS 'L-peptide linking' n O-SULFO-L-TYROSINE ? 'C9 H11 N O6 S' 261.252 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 THR 1 1 1 THR ALA A H n A 1 2 PHE 2 1 1 PHE ALA A G n A 1 3 GLY 3 1 1 GLY GLY A F n A 1 4 SER 4 1 1 SER SER A E n A 1 5 GLY 5 1 1 GLY GLY A D n A 1 6 GLU 6 1 1 GLU GLU A C n A 1 7 ALA 7 1 1 ALA ALA A B n A 1 8 ASP 8 1 1 ASP ASP A A n A 1 9 CYS 9 1 1 CYS CYS A . n A 1 10 GLY 10 2 2 GLY GLY A . n A 1 11 LEU 11 3 3 LEU LEU A . n A 1 12 ARG 12 4 4 ARG ARG A . n A 1 13 PRO 13 5 5 PRO PRO A . n A 1 14 LEU 14 6 6 LEU LEU A . n A 1 15 PHE 15 7 7 PHE PHE A . n A 1 16 GLU 16 8 8 GLU GLU A . n A 1 17 LYS 17 9 9 LYS LYS A . n A 1 18 LYS 18 10 10 LYS LYS A . n A 1 19 SER 19 11 11 SER SER A . n A 1 20 LEU 20 12 12 LEU LEU A . n A 1 21 GLU 21 13 13 GLU GLU A . n A 1 22 ASP 22 14 14 ASP ASP A . n A 1 23 LYS 23 14 14 LYS LYS A A n A 1 24 THR 24 14 14 THR THR A B n A 1 25 GLU 25 14 14 GLU GLU A C n A 1 26 ARG 26 14 14 ARG ARG A D n A 1 27 GLU 27 14 14 GLU GLU A E n A 1 28 LEU 28 14 14 LEU LEU A F n A 1 29 LEU 29 14 14 LEU LEU A G n A 1 30 GLU 30 14 14 GLU GLU A H n A 1 31 SER 31 14 14 SER SER A I n A 1 32 TYR 32 14 14 TYR TYR A J n A 1 33 ILE 33 14 14 ILE ILE A K n A 1 34 ASP 34 14 14 ASP GLY A M n A 1 35 GLY 35 14 ? ? ? A L n A 1 36 ARG 36 15 ? ? ? A . n A 1 37 ILE 37 16 16 ILE ILE A . n A 1 38 VAL 38 17 17 VAL VAL A . n A 1 39 GLU 39 18 18 GLU GLU A . n A 1 40 GLY 40 19 19 GLY GLY A . n A 1 41 SER 41 20 20 SER SER A . n A 1 42 ASP 42 21 21 ASP ASP A . n A 1 43 ALA 43 22 22 ALA ALA A . n A 1 44 GLU 44 23 23 GLU GLU A . n A 1 45 ILE 45 24 24 ILE ILE A . n A 1 46 GLY 46 25 25 GLY GLY A . n A 1 47 MET 47 26 26 MET MET A . n A 1 48 SER 48 27 27 SER SER A . n A 1 49 PRO 49 28 28 PRO PRO A . n A 1 50 TRP 50 29 29 TRP TRP A . n A 1 51 GLN 51 30 30 GLN GLN A . n A 1 52 VAL 52 31 31 VAL VAL A . n A 1 53 MET 53 32 32 MET MET A . n A 1 54 LEU 54 33 33 LEU LEU A . n A 1 55 PHE 55 34 34 PHE PHE A . n A 1 56 ARG 56 35 35 ARG ARG A . n A 1 57 LYS 57 36 36 LYS LYS A . n A 1 58 SER 58 36 36 SER SER A A n A 1 59 PRO 59 37 37 PRO PRO A . n A 1 60 GLN 60 38 38 GLN GLN A . n A 1 61 GLU 61 39 39 GLU GLU A . n A 1 62 LEU 62 40 40 LEU LEU A . n A 1 63 LEU 63 41 41 LEU LEU A . n A 1 64 CYS 64 42 42 CYS CYS A . n A 1 65 GLY 65 43 43 GLY GLY A . n A 1 66 ALA 66 44 44 ALA ALA A . n A 1 67 SER 67 45 45 SER SER A . n A 1 68 LEU 68 46 46 LEU LEU A . n A 1 69 ILE 69 47 47 ILE ILE A . n A 1 70 SER 70 48 48 SER SER A . n A 1 71 ASP 71 49 49 ASP ASP A . n A 1 72 ARG 72 50 50 ARG ARG A . n A 1 73 TRP 73 51 51 TRP TRP A . n A 1 74 VAL 74 52 52 VAL VAL A . n A 1 75 LEU 75 53 53 LEU LEU A . n A 1 76 THR 76 54 54 THR THR A . n A 1 77 ALA 77 55 55 ALA ALA A . n A 1 78 ALA 78 56 56 ALA ALA A . n A 1 79 HIS 79 57 57 HIS HIS A . n A 1 80 CYS 80 58 58 CYS CYS A . n A 1 81 LEU 81 59 59 LEU LEU A . n A 1 82 LEU 82 60 60 LEU LEU A . n A 1 83 TYR 83 60 60 TYR TYR A A n A 1 84 PRO 84 60 60 PRO PRO A B n A 1 85 PRO 85 60 60 PRO PRO A C n A 1 86 TRP 86 60 60 TRP TRP A D n A 1 87 ASP 87 60 60 ASP ASP A E n A 1 88 LYS 88 60 60 LYS LYS A F n A 1 89 ASN 89 60 60 ASN ASN A G n A 1 90 PHE 90 60 60 PHE PHE A H n A 1 91 THR 91 60 60 THR THR A I n A 1 92 GLU 92 61 61 GLU GLU A . n A 1 93 ASN 93 62 62 ASN ASN A . n A 1 94 ASP 94 63 63 ASP ASP A . n A 1 95 LEU 95 64 64 LEU LEU A . n A 1 96 LEU 96 65 65 LEU LEU A . n A 1 97 VAL 97 66 66 VAL VAL A . n A 1 98 ARG 98 67 67 ARG ARG A . n A 1 99 ILE 99 68 68 ILE ILE A . n A 1 100 GLY 100 69 69 GLY GLY A . n A 1 101 LYS 101 70 70 LYS LYS A . n A 1 102 HIS 102 71 71 HIS HIS A . n A 1 103 SER 103 72 72 SER SER A . n A 1 104 ARG 104 73 73 ARG ARG A . n A 1 105 THR 105 74 74 THR THR A . n A 1 106 ARG 106 75 75 ARG ARG A . n A 1 107 TYR 107 76 76 TYR TYR A . n A 1 108 GLU 108 77 77 GLU GLU A . n A 1 109 ARG 109 77 77 ARG ARG A A n A 1 110 ASN 110 78 78 ASN ASN A . n A 1 111 ILE 111 79 79 ILE ILE A . n A 1 112 GLU 112 80 80 GLU GLU A . n A 1 113 LYS 113 81 81 LYS LYS A . n A 1 114 ILE 114 82 82 ILE ILE A . n A 1 115 SER 115 83 83 SER SER A . n A 1 116 MET 116 84 84 MET MET A . n A 1 117 LEU 117 85 85 LEU LEU A . n A 1 118 GLU 118 86 86 GLU GLU A . n A 1 119 LYS 119 87 87 LYS LYS A . n A 1 120 ILE 120 88 88 ILE ILE A . n A 1 121 TYR 121 89 89 TYR TYR A . n A 1 122 ILE 122 90 90 ILE ILE A . n A 1 123 HIS 123 91 91 HIS HIS A . n A 1 124 PRO 124 92 92 PRO PRO A . n A 1 125 ARG 125 93 93 ARG ARG A . n A 1 126 TYR 126 94 94 TYR TYR A . n A 1 127 ASN 127 95 95 ASN ASN A . n A 1 128 TRP 128 96 96 TRP TRP A . n A 1 129 ARG 129 97 97 ARG ARG A . n A 1 130 GLU 130 97 97 GLU GLU A A n A 1 131 ASN 131 98 98 ASN ASN A . n A 1 132 LEU 132 99 99 LEU LEU A . n A 1 133 ASP 133 100 100 ASP ASP A . n A 1 134 ARG 134 101 101 ARG ARG A . n A 1 135 ASP 135 102 102 ASP ASP A . n A 1 136 ILE 136 103 103 ILE ILE A . n A 1 137 ALA 137 104 104 ALA ALA A . n A 1 138 LEU 138 105 105 LEU LEU A . n A 1 139 MET 139 106 106 MET MET A . n A 1 140 LYS 140 107 107 LYS LYS A . n A 1 141 LEU 141 108 108 LEU LEU A . n A 1 142 LYS 142 109 109 LYS LYS A . n A 1 143 LYS 143 110 110 LYS LYS A . n A 1 144 PRO 144 111 111 PRO PRO A . n A 1 145 VAL 145 112 112 VAL VAL A . n A 1 146 ALA 146 113 113 ALA ALA A . n A 1 147 PHE 147 114 114 PHE PHE A . n A 1 148 SER 148 115 115 SER SER A . n A 1 149 ASP 149 116 116 ASP ASP A . n A 1 150 TYR 150 117 117 TYR TYR A . n A 1 151 ILE 151 118 118 ILE ILE A . n A 1 152 HIS 152 119 119 HIS HIS A . n A 1 153 PRO 153 120 120 PRO PRO A . n A 1 154 VAL 154 121 121 VAL VAL A . n A 1 155 CYS 155 122 122 CYS CYS A . n A 1 156 LEU 156 123 123 LEU LEU A . n A 1 157 PRO 157 124 124 PRO PRO A . n A 1 158 ASP 158 125 125 ASP ASP A . n A 1 159 ARG 159 126 126 ARG ARG A . n A 1 160 GLU 160 127 127 GLU GLU A . n A 1 161 THR 161 128 128 THR THR A . n A 1 162 ALA 162 129 129 ALA ALA A . n A 1 163 ALA 163 129 129 ALA ALA A A n A 1 164 SER 164 129 129 SER SER A B n A 1 165 LEU 165 130 130 LEU LEU A C n A 1 166 LEU 166 130 130 LEU LEU A . n A 1 167 GLN 167 131 131 GLN GLN A . n A 1 168 ALA 168 132 132 ALA ALA A . n A 1 169 GLY 169 133 133 GLY GLY A . n A 1 170 TYR 170 134 134 TYR TYR A . n A 1 171 LYS 171 135 135 LYS LYS A . n A 1 172 GLY 172 136 136 GLY GLY A . n A 1 173 ARG 173 137 137 ARG ARG A . n A 1 174 VAL 174 138 138 VAL VAL A . n A 1 175 THR 175 139 139 THR THR A . n A 1 176 GLY 176 140 140 GLY GLY A . n A 1 177 TRP 177 141 141 TRP TRP A . n A 1 178 GLY 178 142 142 GLY GLY A . n A 1 179 ASN 179 143 143 ASN ASN A . n A 1 180 LEU 180 144 144 LEU LEU A . n A 1 181 LYS 181 145 145 LYS LYS A . n A 1 182 GLU 182 146 146 GLU GLU A . n A 1 183 THR 183 147 147 THR THR A . n A 1 184 TRP 184 148 148 TRP TRP A . n A 1 185 THR 185 149 149 THR THR A . n A 1 186 ALA 186 149 149 ALA ALA A A n A 1 187 ASN 187 149 149 ASN ASN A B n A 1 188 VAL 188 149 149 VAL VAL A C n A 1 189 GLY 189 149 149 GLY GLY A D n A 1 190 LYS 190 149 149 LYS LYS A E n A 1 191 GLY 191 150 150 GLY GLY A . n A 1 192 GLN 192 151 151 GLN GLN A . n A 1 193 PRO 193 152 152 PRO PRO A . n A 1 194 SER 194 153 153 SER SER A . n A 1 195 VAL 195 154 154 VAL VAL A . n A 1 196 LEU 196 155 155 LEU LEU A . n A 1 197 GLN 197 156 156 GLN GLN A . n A 1 198 VAL 198 157 157 VAL VAL A . n A 1 199 VAL 199 158 158 VAL VAL A . n A 1 200 ASN 200 159 159 ASN ASN A . n A 1 201 LEU 201 160 160 LEU LEU A . n A 1 202 PRO 202 161 161 PRO PRO A . n A 1 203 ILE 203 162 162 ILE ILE A . n A 1 204 VAL 204 163 163 VAL VAL A . n A 1 205 GLU 205 164 164 GLU GLU A . n A 1 206 ARG 206 165 165 ARG ARG A . n A 1 207 PRO 207 166 166 PRO PRO A . n A 1 208 VAL 208 167 167 VAL VAL A . n A 1 209 CYS 209 168 168 CYS CYS A . n A 1 210 LYS 210 169 169 LYS LYS A . n A 1 211 ASP 211 170 170 ASP ASP A . n A 1 212 SER 212 171 171 SER SER A . n A 1 213 THR 213 172 172 THR THR A . n A 1 214 ARG 214 173 173 ARG ARG A . n A 1 215 ILE 215 174 174 ILE ILE A . n A 1 216 ARG 216 175 175 ARG ARG A . n A 1 217 ILE 217 176 176 ILE ILE A . n A 1 218 THR 218 177 177 THR THR A . n A 1 219 ASP 219 178 178 ASP ASP A . n A 1 220 ASN 220 179 179 ASN ASN A . n A 1 221 MET 221 180 180 MET MET A . n A 1 222 PHE 222 181 181 PHE PHE A . n A 1 223 CYS 223 182 182 CYS CYS A . n A 1 224 ALA 224 183 183 ALA ALA A . n A 1 225 GLY 225 184 184 GLY GLY A . n A 1 226 TYR 226 184 184 TYR TYR A A n A 1 227 LYS 227 185 185 LYS LYS A . n A 1 228 PRO 228 186 186 PRO PRO A . n A 1 229 ASP 229 186 186 ASP ASP A A n A 1 230 GLU 230 186 186 GLU GLU A B n A 1 231 GLY 231 186 186 GLY GLY A C n A 1 232 LYS 232 186 186 LYS LYS A D n A 1 233 ARG 233 187 187 ARG ARG A . n A 1 234 GLY 234 188 188 GLY GLY A . n A 1 235 ASP 235 189 189 ASP ASP A . n A 1 236 ALA 236 190 190 ALA ALA A . n A 1 237 CYS 237 191 191 CYS CYS A . n A 1 238 GLU 238 192 192 GLU GLU A . n A 1 239 GLY 239 193 193 GLY GLY A . n A 1 240 ASP 240 194 194 ASP ASP A . n A 1 241 SER 241 195 195 SER SER A . n A 1 242 GLY 242 196 196 GLY GLY A . n A 1 243 GLY 243 197 197 GLY GLY A . n A 1 244 PRO 244 198 198 PRO PRO A . n A 1 245 PHE 245 199 199 PHE PHE A . n A 1 246 VAL 246 200 200 VAL VAL A . n A 1 247 MET 247 201 201 MET MET A . n A 1 248 LYS 248 202 202 LYS LYS A . n A 1 249 SER 249 203 203 SER SER A . n A 1 250 PRO 250 204 204 PRO PRO A . n A 1 251 PHE 251 204 204 PHE PHE A A n A 1 252 ASN 252 204 204 ASN ASN A B n A 1 253 ASN 253 205 205 ASN ASN A . n A 1 254 ARG 254 206 206 ARG ARG A . n A 1 255 TRP 255 207 207 TRP TRP A . n A 1 256 TYR 256 208 208 TYR TYR A . n A 1 257 GLN 257 209 209 GLN GLN A . n A 1 258 MET 258 210 210 MET MET A . n A 1 259 GLY 259 211 211 GLY GLY A . n A 1 260 ILE 260 212 212 ILE ILE A . n A 1 261 VAL 261 213 213 VAL VAL A . n A 1 262 SER 262 214 214 SER SER A . n A 1 263 TRP 263 215 215 TRP TRP A . n A 1 264 GLY 264 216 216 GLY GLY A . n A 1 265 GLU 265 217 217 GLU GLU A . n A 1 266 GLY 266 219 219 GLY GLY A . n A 1 267 CYS 267 220 220 CYS CYS A . n A 1 268 ASP 268 221 221 ASP ASP A . n A 1 269 ARG 269 221 221 ARG ARG A A n A 1 270 ASP 270 222 222 ASP ASP A . n A 1 271 GLY 271 223 223 GLY GLY A . n A 1 272 LYS 272 224 224 LYS LYS A . n A 1 273 TYR 273 225 225 TYR TYR A . n A 1 274 GLY 274 226 226 GLY GLY A . n A 1 275 PHE 275 227 227 PHE PHE A . n A 1 276 TYR 276 228 228 TYR TYR A . n A 1 277 THR 277 229 229 THR THR A . n A 1 278 HIS 278 230 230 HIS HIS A . n A 1 279 VAL 279 231 231 VAL VAL A . n A 1 280 PHE 280 232 232 PHE PHE A . n A 1 281 ARG 281 233 233 ARG ARG A . n A 1 282 LEU 282 234 234 LEU LEU A . n A 1 283 LYS 283 235 235 LYS LYS A . n A 1 284 LYS 284 236 236 LYS LYS A . n A 1 285 TRP 285 237 237 TRP TRP A . n A 1 286 ILE 286 238 238 ILE ILE A . n A 1 287 GLN 287 239 239 GLN GLN A . n A 1 288 LYS 288 240 240 LYS LYS A . n A 1 289 VAL 289 241 241 VAL VAL A . n A 1 290 ILE 290 242 242 ILE ILE A . n A 1 291 ASP 291 243 243 ASP ASP A . n A 1 292 GLN 292 244 244 GLN GLN A . n A 1 293 PHE 293 245 245 PHE PHE A . n A 1 294 GLY 294 246 246 GLY GLY A . n A 1 295 GLU 295 247 247 GLU ALA A . n B 2 1 ASP 1 355 355 ASP ASP B . n B 2 2 PHE 2 356 356 PHE PHE B . n B 2 3 GLU 3 357 357 GLU GLU B . n B 2 4 GLU 4 358 358 GLU GLU B . n B 2 5 ILE 5 359 359 ILE ILE B . n B 2 6 PRO 6 360 360 PRO PRO B . n B 2 7 GLU 7 361 361 GLU GLU B . n B 2 8 GLU 8 362 362 GLU GLU B . n B 2 9 TYS 9 363 363 TYS TYR B . n B 2 10 LEU 10 364 364 LEU LEU B . n B 2 11 GLN 11 365 365 GLN GLN B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 1Z0 1 401 401 1Z0 MEA A . D 4 NAG 1 250 250 NAG NAG A . E 5 NA 1 300 600 NA NA A . F 5 NA 1 301 601 NA NA A . G 6 HOH 1 501 501 HOH HOH A . G 6 HOH 2 502 502 HOH HOH A . G 6 HOH 3 503 503 HOH HOH A . G 6 HOH 4 504 504 HOH HOH A . G 6 HOH 5 506 506 HOH HOH A . G 6 HOH 6 507 507 HOH HOH A . G 6 HOH 7 508 508 HOH HOH A . G 6 HOH 8 509 509 HOH HOH A . G 6 HOH 9 510 510 HOH HOH A . G 6 HOH 10 511 511 HOH HOH A . G 6 HOH 11 512 512 HOH HOH A . G 6 HOH 12 513 513 HOH HOH A . G 6 HOH 13 514 514 HOH HOH A . G 6 HOH 14 515 515 HOH HOH A . G 6 HOH 15 516 516 HOH HOH A . G 6 HOH 16 518 518 HOH HOH A . G 6 HOH 17 523 523 HOH HOH A . G 6 HOH 18 524 524 HOH HOH A . G 6 HOH 19 525 525 HOH HOH A . G 6 HOH 20 526 526 HOH HOH A . G 6 HOH 21 527 527 HOH HOH A . G 6 HOH 22 528 528 HOH HOH A . G 6 HOH 23 529 529 HOH HOH A . G 6 HOH 24 530 530 HOH HOH A . G 6 HOH 25 531 531 HOH HOH A . G 6 HOH 26 532 532 HOH HOH A . G 6 HOH 27 533 533 HOH HOH A . G 6 HOH 28 534 534 HOH HOH A . G 6 HOH 29 535 535 HOH HOH A . G 6 HOH 30 536 536 HOH HOH A . G 6 HOH 31 537 537 HOH HOH A . G 6 HOH 32 538 538 HOH HOH A . G 6 HOH 33 539 539 HOH HOH A . G 6 HOH 34 540 540 HOH HOH A . G 6 HOH 35 541 541 HOH HOH A . G 6 HOH 36 542 542 HOH HOH A . G 6 HOH 37 543 543 HOH HOH A . G 6 HOH 38 544 544 HOH HOH A . G 6 HOH 39 545 545 HOH HOH A . G 6 HOH 40 546 546 HOH HOH A . G 6 HOH 41 547 547 HOH HOH A . G 6 HOH 42 548 548 HOH HOH A . G 6 HOH 43 549 549 HOH HOH A . G 6 HOH 44 550 550 HOH HOH A . G 6 HOH 45 551 551 HOH HOH A . G 6 HOH 46 552 552 HOH HOH A . G 6 HOH 47 553 553 HOH HOH A . G 6 HOH 48 554 554 HOH HOH A . G 6 HOH 49 555 555 HOH HOH A . G 6 HOH 50 556 556 HOH HOH A . G 6 HOH 51 561 561 HOH HOH A . G 6 HOH 52 562 562 HOH HOH A . G 6 HOH 53 563 563 HOH HOH A . G 6 HOH 54 564 564 HOH HOH A . G 6 HOH 55 565 565 HOH HOH A . G 6 HOH 56 566 566 HOH HOH A . G 6 HOH 57 568 568 HOH HOH A . G 6 HOH 58 571 571 HOH HOH A . G 6 HOH 59 572 572 HOH HOH A . G 6 HOH 60 573 573 HOH HOH A . G 6 HOH 61 574 574 HOH HOH A . G 6 HOH 62 576 576 HOH HOH A . G 6 HOH 63 577 577 HOH HOH A . G 6 HOH 64 579 579 HOH HOH A . G 6 HOH 65 580 580 HOH HOH A . G 6 HOH 66 581 581 HOH HOH A . G 6 HOH 67 582 582 HOH HOH A . G 6 HOH 68 583 583 HOH HOH A . G 6 HOH 69 584 584 HOH HOH A . G 6 HOH 70 585 585 HOH HOH A . G 6 HOH 71 586 586 HOH HOH A . G 6 HOH 72 587 587 HOH HOH A . G 6 HOH 73 588 588 HOH HOH A . G 6 HOH 74 589 589 HOH HOH A . G 6 HOH 75 590 590 HOH HOH A . G 6 HOH 76 591 591 HOH HOH A . G 6 HOH 77 592 592 HOH HOH A . G 6 HOH 78 593 593 HOH HOH A . G 6 HOH 79 595 595 HOH HOH A . G 6 HOH 80 596 596 HOH HOH A . G 6 HOH 81 597 597 HOH HOH A . G 6 HOH 82 598 598 HOH HOH A . G 6 HOH 83 599 599 HOH HOH A . G 6 HOH 84 601 601 HOH HOH A . G 6 HOH 85 602 602 HOH HOH A . G 6 HOH 86 604 604 HOH HOH A . G 6 HOH 87 605 605 HOH HOH A . G 6 HOH 88 607 607 HOH HOH A . G 6 HOH 89 608 608 HOH HOH A . G 6 HOH 90 609 609 HOH HOH A . G 6 HOH 91 614 614 HOH HOH A . G 6 HOH 92 615 615 HOH HOH A . G 6 HOH 93 617 617 HOH HOH A . G 6 HOH 94 618 618 HOH HOH A . G 6 HOH 95 621 621 HOH HOH A . G 6 HOH 96 626 626 HOH HOH A . G 6 HOH 97 629 629 HOH HOH A . G 6 HOH 98 632 632 HOH HOH A . G 6 HOH 99 633 633 HOH HOH A . G 6 HOH 100 634 634 HOH HOH A . G 6 HOH 101 637 637 HOH HOH A . G 6 HOH 102 638 638 HOH HOH A . G 6 HOH 103 642 642 HOH HOH A . G 6 HOH 104 643 643 HOH HOH A . G 6 HOH 105 646 646 HOH HOH A . G 6 HOH 106 647 647 HOH HOH A . G 6 HOH 107 648 648 HOH HOH A . G 6 HOH 108 649 649 HOH HOH A . G 6 HOH 109 650 650 HOH HOH A . G 6 HOH 110 651 651 HOH HOH A . G 6 HOH 111 653 653 HOH HOH A . G 6 HOH 112 656 656 HOH HOH A . G 6 HOH 113 657 657 HOH HOH A . G 6 HOH 114 659 659 HOH HOH A . G 6 HOH 115 661 661 HOH HOH A . G 6 HOH 116 662 662 HOH HOH A . G 6 HOH 117 663 663 HOH HOH A . G 6 HOH 118 668 668 HOH HOH A . G 6 HOH 119 669 669 HOH HOH A . G 6 HOH 120 670 670 HOH HOH A . G 6 HOH 121 672 672 HOH HOH A . G 6 HOH 122 673 673 HOH HOH A . G 6 HOH 123 674 674 HOH HOH A . G 6 HOH 124 675 675 HOH HOH A . G 6 HOH 125 676 676 HOH HOH A . G 6 HOH 126 677 677 HOH HOH A . G 6 HOH 127 678 678 HOH HOH A . G 6 HOH 128 679 679 HOH HOH A . G 6 HOH 129 680 680 HOH HOH A . G 6 HOH 130 681 681 HOH HOH A . G 6 HOH 131 684 684 HOH HOH A . G 6 HOH 132 685 685 HOH HOH A . G 6 HOH 133 686 686 HOH HOH A . G 6 HOH 134 687 687 HOH HOH A . G 6 HOH 135 690 690 HOH HOH A . G 6 HOH 136 693 693 HOH HOH A . G 6 HOH 137 694 694 HOH HOH A . G 6 HOH 138 695 695 HOH HOH A . G 6 HOH 139 696 696 HOH HOH A . G 6 HOH 140 697 697 HOH HOH A . G 6 HOH 141 699 699 HOH HOH A . G 6 HOH 142 700 700 HOH HOH A . G 6 HOH 143 702 702 HOH HOH A . G 6 HOH 144 705 705 HOH HOH A . G 6 HOH 145 706 706 HOH HOH A . G 6 HOH 146 708 708 HOH HOH A . G 6 HOH 147 711 711 HOH HOH A . G 6 HOH 148 713 713 HOH HOH A . G 6 HOH 149 714 714 HOH HOH A . G 6 HOH 150 715 715 HOH HOH A . G 6 HOH 151 716 716 HOH HOH A . G 6 HOH 152 717 717 HOH HOH A . G 6 HOH 153 719 719 HOH HOH A . G 6 HOH 154 723 723 HOH HOH A . G 6 HOH 155 726 726 HOH HOH A . G 6 HOH 156 727 727 HOH HOH A . G 6 HOH 157 729 729 HOH HOH A . G 6 HOH 158 732 732 HOH HOH A . G 6 HOH 159 733 733 HOH HOH A . G 6 HOH 160 736 736 HOH HOH A . G 6 HOH 161 737 737 HOH HOH A . G 6 HOH 162 739 739 HOH HOH A . G 6 HOH 163 740 740 HOH HOH A . G 6 HOH 164 741 741 HOH HOH A . G 6 HOH 165 742 742 HOH HOH A . G 6 HOH 166 743 743 HOH HOH A . G 6 HOH 167 745 745 HOH HOH A . G 6 HOH 168 747 747 HOH HOH A . G 6 HOH 169 748 748 HOH HOH A . G 6 HOH 170 749 749 HOH HOH A . G 6 HOH 171 750 750 HOH HOH A . G 6 HOH 172 751 751 HOH HOH A . G 6 HOH 173 752 752 HOH HOH A . G 6 HOH 174 753 753 HOH HOH A . G 6 HOH 175 754 754 HOH HOH A . G 6 HOH 176 755 755 HOH HOH A . G 6 HOH 177 756 756 HOH HOH A . G 6 HOH 178 757 757 HOH HOH A . G 6 HOH 179 758 758 HOH HOH A . G 6 HOH 180 759 759 HOH HOH A . G 6 HOH 181 771 771 HOH HOH A . G 6 HOH 182 772 772 HOH HOH A . G 6 HOH 183 773 773 HOH HOH A . G 6 HOH 184 774 774 HOH HOH A . G 6 HOH 185 775 775 HOH HOH A . G 6 HOH 186 776 776 HOH HOH A . G 6 HOH 187 777 777 HOH HOH A . G 6 HOH 188 778 778 HOH HOH A . G 6 HOH 189 779 779 HOH HOH A . G 6 HOH 190 780 780 HOH HOH A . G 6 HOH 191 781 781 HOH HOH A . G 6 HOH 192 782 782 HOH HOH A . G 6 HOH 193 783 783 HOH HOH A . G 6 HOH 194 784 784 HOH HOH A . G 6 HOH 195 785 785 HOH HOH A . G 6 HOH 196 786 786 HOH HOH A . G 6 HOH 197 787 787 HOH HOH A . G 6 HOH 198 788 788 HOH HOH A . G 6 HOH 199 789 789 HOH HOH A . G 6 HOH 200 790 790 HOH HOH A . G 6 HOH 201 791 791 HOH HOH A . G 6 HOH 202 792 792 HOH HOH A . G 6 HOH 203 793 793 HOH HOH A . G 6 HOH 204 795 795 HOH HOH A . G 6 HOH 205 796 796 HOH HOH A . G 6 HOH 206 797 797 HOH HOH A . G 6 HOH 207 798 798 HOH HOH A . G 6 HOH 208 799 799 HOH HOH A . G 6 HOH 209 800 800 HOH HOH A . G 6 HOH 210 801 801 HOH HOH A . G 6 HOH 211 802 802 HOH HOH A . G 6 HOH 212 803 803 HOH HOH A . G 6 HOH 213 804 804 HOH HOH A . G 6 HOH 214 805 805 HOH HOH A . G 6 HOH 215 806 806 HOH HOH A . G 6 HOH 216 807 807 HOH HOH A . G 6 HOH 217 809 809 HOH HOH A . G 6 HOH 218 811 811 HOH HOH A . G 6 HOH 219 812 812 HOH HOH A . G 6 HOH 220 814 814 HOH HOH A . G 6 HOH 221 815 815 HOH HOH A . G 6 HOH 222 816 816 HOH HOH A . G 6 HOH 223 817 817 HOH HOH A . G 6 HOH 224 818 818 HOH HOH A . G 6 HOH 225 819 819 HOH HOH A . G 6 HOH 226 820 820 HOH HOH A . G 6 HOH 227 821 821 HOH HOH A . G 6 HOH 228 822 822 HOH HOH A . G 6 HOH 229 823 823 HOH HOH A . G 6 HOH 230 824 824 HOH HOH A . G 6 HOH 231 825 825 HOH HOH A . G 6 HOH 232 826 826 HOH HOH A . G 6 HOH 233 827 827 HOH HOH A . G 6 HOH 234 831 831 HOH HOH A . G 6 HOH 235 832 832 HOH HOH A . G 6 HOH 236 833 833 HOH HOH A . G 6 HOH 237 835 835 HOH HOH A . G 6 HOH 238 836 836 HOH HOH A . G 6 HOH 239 837 837 HOH HOH A . G 6 HOH 240 838 838 HOH HOH A . G 6 HOH 241 839 839 HOH HOH A . G 6 HOH 242 840 840 HOH HOH A . G 6 HOH 243 841 841 HOH HOH A . G 6 HOH 244 842 842 HOH HOH A . G 6 HOH 245 843 843 HOH HOH A . G 6 HOH 246 844 844 HOH HOH A . G 6 HOH 247 845 845 HOH HOH A . G 6 HOH 248 846 846 HOH HOH A . G 6 HOH 249 847 847 HOH HOH A . G 6 HOH 250 848 848 HOH HOH A . G 6 HOH 251 849 849 HOH HOH A . G 6 HOH 252 850 850 HOH HOH A . G 6 HOH 253 851 851 HOH HOH A . G 6 HOH 254 852 852 HOH HOH A . G 6 HOH 255 859 859 HOH HOH A . G 6 HOH 256 860 860 HOH HOH A . G 6 HOH 257 861 861 HOH HOH A . G 6 HOH 258 862 862 HOH HOH A . G 6 HOH 259 863 863 HOH HOH A . G 6 HOH 260 864 864 HOH HOH A . G 6 HOH 261 866 866 HOH HOH A . G 6 HOH 262 867 867 HOH HOH A . G 6 HOH 263 868 868 HOH HOH A . G 6 HOH 264 870 870 HOH HOH A . G 6 HOH 265 873 873 HOH HOH A . G 6 HOH 266 874 874 HOH HOH A . G 6 HOH 267 878 878 HOH HOH A . G 6 HOH 268 879 879 HOH HOH A . G 6 HOH 269 880 880 HOH HOH A . G 6 HOH 270 883 883 HOH HOH A . G 6 HOH 271 887 887 HOH HOH A . G 6 HOH 272 888 888 HOH HOH A . G 6 HOH 273 889 889 HOH HOH A . G 6 HOH 274 890 890 HOH HOH A . G 6 HOH 275 891 891 HOH HOH A . G 6 HOH 276 892 892 HOH HOH A . G 6 HOH 277 893 893 HOH HOH A . G 6 HOH 278 894 894 HOH HOH A . G 6 HOH 279 896 896 HOH HOH A . G 6 HOH 280 898 898 HOH HOH A . G 6 HOH 281 899 899 HOH HOH A . G 6 HOH 282 902 902 HOH HOH A . G 6 HOH 283 904 904 HOH HOH A . G 6 HOH 284 905 905 HOH HOH A . G 6 HOH 285 906 906 HOH HOH A . G 6 HOH 286 908 908 HOH HOH A . G 6 HOH 287 913 913 HOH HOH A . G 6 HOH 288 915 915 HOH HOH A . G 6 HOH 289 916 916 HOH HOH A . G 6 HOH 290 935 935 HOH HOH A . G 6 HOH 291 936 936 HOH HOH A . G 6 HOH 292 938 938 HOH HOH A . G 6 HOH 293 946 946 HOH HOH A . G 6 HOH 294 947 947 HOH HOH A . G 6 HOH 295 948 948 HOH HOH A . G 6 HOH 296 950 950 HOH HOH A . G 6 HOH 297 951 951 HOH HOH A . G 6 HOH 298 953 953 HOH HOH A . G 6 HOH 299 958 958 HOH HOH A . G 6 HOH 300 959 959 HOH HOH A . G 6 HOH 301 960 960 HOH HOH A . G 6 HOH 302 961 961 HOH HOH A . G 6 HOH 303 962 962 HOH HOH A . G 6 HOH 304 963 963 HOH HOH A . G 6 HOH 305 965 965 HOH HOH A . G 6 HOH 306 971 971 HOH HOH A . G 6 HOH 307 972 972 HOH HOH A . G 6 HOH 308 974 974 HOH HOH A . G 6 HOH 309 976 976 HOH HOH A . G 6 HOH 310 979 979 HOH HOH A . G 6 HOH 311 980 980 HOH HOH A . G 6 HOH 312 981 981 HOH HOH A . G 6 HOH 313 982 982 HOH HOH A . G 6 HOH 314 983 983 HOH HOH A . G 6 HOH 315 984 984 HOH HOH A . G 6 HOH 316 985 985 HOH HOH A . G 6 HOH 317 986 986 HOH HOH A . G 6 HOH 318 987 987 HOH HOH A . G 6 HOH 319 988 988 HOH HOH A . G 6 HOH 320 992 992 HOH HOH A . G 6 HOH 321 993 993 HOH HOH A . G 6 HOH 322 995 995 HOH HOH A . G 6 HOH 323 996 996 HOH HOH A . G 6 HOH 324 998 998 HOH HOH A . G 6 HOH 325 999 999 HOH HOH A . G 6 HOH 326 1001 1001 HOH HOH A . G 6 HOH 327 1002 1002 HOH HOH A . G 6 HOH 328 1004 1004 HOH HOH A . G 6 HOH 329 1005 1005 HOH HOH A . G 6 HOH 330 1006 1006 HOH HOH A . G 6 HOH 331 1007 1007 HOH HOH A . G 6 HOH 332 1008 1008 HOH HOH A . G 6 HOH 333 1009 1009 HOH HOH A . H 6 HOH 1 558 558 HOH HOH B . H 6 HOH 2 560 560 HOH HOH B . H 6 HOH 3 612 612 HOH HOH B . H 6 HOH 4 613 613 HOH HOH B . H 6 HOH 5 616 616 HOH HOH B . H 6 HOH 6 746 746 HOH HOH B . H 6 HOH 7 794 794 HOH HOH B . H 6 HOH 8 855 855 HOH HOH B . H 6 HOH 9 869 869 HOH HOH B . H 6 HOH 10 872 872 HOH HOH B . H 6 HOH 11 875 875 HOH HOH B . H 6 HOH 12 969 969 HOH HOH B . H 6 HOH 13 970 970 HOH HOH B . H 6 HOH 14 977 977 HOH HOH B . H 6 HOH 15 997 997 HOH HOH B . H 6 HOH 16 1003 1003 HOH HOH B . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A THR 1 H OG1 ? A THR 1 OG1 2 1 Y 1 A THR 1 H CG2 ? A THR 1 CG2 3 1 Y 1 A PHE 1 G CG ? A PHE 2 CG 4 1 Y 1 A PHE 1 G CD1 ? A PHE 2 CD1 5 1 Y 1 A PHE 1 G CD2 ? A PHE 2 CD2 6 1 Y 1 A PHE 1 G CE1 ? A PHE 2 CE1 7 1 Y 1 A PHE 1 G CE2 ? A PHE 2 CE2 8 1 Y 1 A PHE 1 G CZ ? A PHE 2 CZ 9 1 Y 1 A ASP 14 M CB ? A ASP 34 CB 10 1 Y 1 A ASP 14 M CG ? A ASP 34 CG 11 1 Y 1 A ASP 14 M OD1 ? A ASP 34 OD1 12 1 Y 1 A ASP 14 M OD2 ? A ASP 34 OD2 13 1 Y 1 A GLU 247 ? CG ? A GLU 295 CG 14 1 Y 1 A GLU 247 ? CD ? A GLU 295 CD 15 1 Y 1 A GLU 247 ? OE1 ? A GLU 295 OE1 16 1 Y 1 A GLU 247 ? OE2 ? A GLU 295 OE2 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DENZO 'data reduction' . ? 1 SCALEPACK 'data scaling' . ? 2 AMoRE phasing . ? 3 X-PLOR refinement 3.851 ? 4 # _cell.entry_id 1DOJ _cell.length_a 62.982 _cell.length_b 117.521 _cell.length_c 47.989 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 1DOJ _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? # _exptl.entry_id 1DOJ _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.47 _exptl_crystal.density_percent_sol 50.21 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 295.0 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details '0.75 sodium acetate, 0.01% (w/v), 20% polyethylene glycol 4000 (w/v), pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 295.0K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type RIGAKU _diffrn_detector.pdbx_collection_date 1998-03-04 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type RIGAKU _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1DOJ _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 99.0 _reflns.d_resolution_high 1.66 _reflns.number_obs 126549 _reflns.number_all 126549 _reflns.percent_possible_obs 87.1 _reflns.pdbx_Rmerge_I_obs 0.04 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 16.3 _reflns.B_iso_Wilson_estimate 16.2 _reflns.pdbx_redundancy 5 _reflns.R_free_details ? _reflns.observed_criterion_F_min ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.66 _reflns_shell.d_res_low ? _reflns_shell.percent_possible_all 87.1 _reflns_shell.Rmerge_I_obs 0.2 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy 3 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 1DOJ _refine.ls_number_reflns_obs 33357 _refine.ls_number_reflns_all 39616 _refine.pdbx_ls_sigma_I 0 _refine.pdbx_ls_sigma_F 3.0 _refine.pdbx_data_cutoff_high_absF 1520225.35 _refine.pdbx_data_cutoff_low_absF 0.00 _refine.ls_d_res_low 8.00 _refine.ls_d_res_high 1.70 _refine.ls_percent_reflns_obs 84.2 _refine.ls_R_factor_obs 0.174 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.174 _refine.ls_R_factor_R_free 0.217 _refine.ls_R_factor_R_free_error 0.004 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.0 _refine.ls_number_reflns_R_free 3322 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean 19.5 _refine.aniso_B[1][1] 1.02 _refine.aniso_B[2][2] -1.45 _refine.aniso_B[3][3] 0.43 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.490 _refine.solvent_model_param_bsol 93.48 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'The Bijvoet differences were used in phasing' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.pdbx_overall_phase_error ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1DOJ _refine_analyze.Luzzati_coordinate_error_obs 0.18 _refine_analyze.Luzzati_sigma_a_obs 0.13 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.21 _refine_analyze.Luzzati_sigma_a_free 0.16 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2452 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 58 _refine_hist.number_atoms_solvent 349 _refine_hist.number_atoms_total 2859 _refine_hist.d_res_high 1.70 _refine_hist.d_res_low 8.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.01 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.4 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 26.3 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.61 ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 1.40 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 2.06 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 2.42 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 3.48 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 1.70 _refine_ls_shell.d_res_low 1.81 _refine_ls_shell.number_reflns_R_work 3311 _refine_ls_shell.R_factor_R_work 0.276 _refine_ls_shell.percent_reflns_obs 56.4 _refine_ls_shell.R_factor_R_free 0.298 _refine_ls_shell.R_factor_R_free_error 0.016 _refine_ls_shell.percent_reflns_R_free 10.0 _refine_ls_shell.number_reflns_R_free 3670 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PROTEIN_REP.PARAM TOPHCSDX.PRO 'X-RAY DIFFRACTION' 2 INH3.PARAM TOPH19.SOL 'X-RAY DIFFRACTION' 3 ION.PARAM INH2.TOP 'X-RAY DIFFRACTION' 4 NAG.PARAM NAG.TOP 'X-RAY DIFFRACTION' 5 ? SULF.TOP 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 1DOJ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1DOJ _struct.title 'Crystal structure of human alpha-thrombin*RWJ-51438 complex at 1.7 A' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1DOJ _struct_keywords.pdbx_keywords 'HYDROLASE/HYDROLASE INHIBITOR' _struct_keywords.text 'thrombin, serine protease, enzyme inhibition, HYDROLASE-HYDROLASE INHIBITOR COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? G N N 6 ? H N N 6 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_db_accession _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_db_isoform 1 UNP THRB_HUMAN 1 P00734 ? ? ? 2 UNP HIRV2_HIRME 2 P09945 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1DOJ A 1 H 295 ? P00734 328 ? 622 ? 1 247 2 2 1DOJ B 1 ? 11 ? P09945 62 ? 72 ? 355 365 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PHE A 15 ? SER A 19 ? PHE A 7 SER A 11 5 ? 5 HELX_P HELX_P2 3 ALA A 77 ? LEU A 81 ? ALA A 55 LEU A 59 1 ? 5 HELX_P HELX_P3 5 ASP A 158 ? LEU A 166 ? ASP A 125 LEU A 130 1 ? 9 HELX_P HELX_P4 6 GLU A 205 ? SER A 212 ? GLU A 164 SER A 171 1 ? 8 HELX_P HELX_P5 8 VAL A 279 ? PHE A 293 ? VAL A 231 PHE A 245 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 9 SG ? ? ? 1_555 A CYS 155 SG ? ? A CYS 1 A CYS 122 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf2 disulf ? ? A CYS 64 SG ? ? ? 1_555 A CYS 80 SG ? ? A CYS 42 A CYS 58 1_555 ? ? ? ? ? ? ? 2.027 ? ? disulf3 disulf ? ? A CYS 209 SG ? ? ? 1_555 A CYS 223 SG ? ? A CYS 168 A CYS 182 1_555 ? ? ? ? ? ? ? 2.027 ? ? disulf4 disulf ? ? A CYS 237 SG ? ? ? 1_555 A CYS 267 SG ? ? A CYS 191 A CYS 220 1_555 ? ? ? ? ? ? ? 2.032 ? ? covale1 covale one ? A ASN 89 ND2 ? G ? 1_555 D NAG . C1 ? ? A ASN 60 A NAG 250 1_555 ? ? ? ? ? ? ? 1.460 ? N-Glycosylation covale2 covale none ? A SER 241 OG ? ? ? 1_555 C 1Z0 . C4 ? ? A SER 195 A 1Z0 401 1_555 ? ? ? ? ? ? ? 1.419 ? ? covale3 covale both ? B GLU 8 C ? ? ? 1_555 B TYS 9 N ? ? B GLU 362 B TYS 363 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale4 covale both ? B TYS 9 C ? ? ? 1_555 B LEU 10 N ? ? B TYS 363 B LEU 364 1_555 ? ? ? ? ? ? ? 1.328 ? ? metalc1 metalc ? ? A LYS 210 O ? ? ? 1_555 F NA . NA ? ? A LYS 169 A NA 301 1_555 ? ? ? ? ? ? ? 2.812 ? ? metalc2 metalc ? ? A THR 213 O ? ? ? 1_555 F NA . NA ? ? A THR 172 A NA 301 1_555 ? ? ? ? ? ? ? 2.740 ? ? metalc3 metalc ? ? A ILE 215 O ? ? ? 1_555 F NA . NA ? ? A ILE 174 A NA 301 1_555 ? ? ? ? ? ? ? 2.728 ? ? metalc4 metalc ? ? A ARG 269 O ? A ? 1_555 E NA . NA ? ? A ARG 221 A NA 300 1_555 ? ? ? ? ? ? ? 2.397 ? ? metalc5 metalc ? ? A LYS 272 O ? ? ? 1_555 E NA . NA ? ? A LYS 224 A NA 300 1_555 ? ? ? ? ? ? ? 2.468 ? ? metalc6 metalc ? ? E NA . NA ? ? ? 1_555 G HOH . O ? ? A NA 300 A HOH 531 1_555 ? ? ? ? ? ? ? 2.634 ? ? metalc7 metalc ? ? E NA . NA ? ? ? 1_555 G HOH . O ? ? A NA 300 A HOH 595 1_555 ? ? ? ? ? ? ? 2.606 ? ? metalc8 metalc ? ? E NA . NA ? ? ? 1_555 G HOH . O ? ? A NA 300 A HOH 713 1_555 ? ? ? ? ? ? ? 2.470 ? ? metalc9 metalc ? ? E NA . NA ? ? ? 1_555 G HOH . O ? ? A NA 300 A HOH 714 1_555 ? ? ? ? ? ? ? 2.508 ? ? metalc10 metalc ? ? F NA . NA ? ? ? 1_555 G HOH . O ? ? A NA 301 A HOH 684 1_555 ? ? ? ? ? ? ? 2.882 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? metalc ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A LYS 210 ? A LYS 169 ? 1_555 NA ? F NA . ? A NA 301 ? 1_555 O ? A THR 213 ? A THR 172 ? 1_555 63.8 ? 2 O ? A LYS 210 ? A LYS 169 ? 1_555 NA ? F NA . ? A NA 301 ? 1_555 O ? A ILE 215 ? A ILE 174 ? 1_555 143.0 ? 3 O ? A THR 213 ? A THR 172 ? 1_555 NA ? F NA . ? A NA 301 ? 1_555 O ? A ILE 215 ? A ILE 174 ? 1_555 91.4 ? 4 O ? A LYS 210 ? A LYS 169 ? 1_555 NA ? F NA . ? A NA 301 ? 1_555 O ? G HOH . ? A HOH 684 ? 1_555 121.6 ? 5 O ? A THR 213 ? A THR 172 ? 1_555 NA ? F NA . ? A NA 301 ? 1_555 O ? G HOH . ? A HOH 684 ? 1_555 164.7 ? 6 O ? A ILE 215 ? A ILE 174 ? 1_555 NA ? F NA . ? A NA 301 ? 1_555 O ? G HOH . ? A HOH 684 ? 1_555 89.8 ? 7 O ? A ARG 269 ? A ARG 221 A 1_555 NA ? E NA . ? A NA 300 ? 1_555 O ? A LYS 272 ? A LYS 224 ? 1_555 90.4 ? 8 O ? A ARG 269 ? A ARG 221 A 1_555 NA ? E NA . ? A NA 300 ? 1_555 O ? G HOH . ? A HOH 531 ? 1_555 157.7 ? 9 O ? A LYS 272 ? A LYS 224 ? 1_555 NA ? E NA . ? A NA 300 ? 1_555 O ? G HOH . ? A HOH 531 ? 1_555 68.3 ? 10 O ? A ARG 269 ? A ARG 221 A 1_555 NA ? E NA . ? A NA 300 ? 1_555 O ? G HOH . ? A HOH 595 ? 1_555 90.0 ? 11 O ? A LYS 272 ? A LYS 224 ? 1_555 NA ? E NA . ? A NA 300 ? 1_555 O ? G HOH . ? A HOH 595 ? 1_555 93.4 ? 12 O ? G HOH . ? A HOH 531 ? 1_555 NA ? E NA . ? A NA 300 ? 1_555 O ? G HOH . ? A HOH 595 ? 1_555 85.2 ? 13 O ? A ARG 269 ? A ARG 221 A 1_555 NA ? E NA . ? A NA 300 ? 1_555 O ? G HOH . ? A HOH 713 ? 1_555 95.1 ? 14 O ? A LYS 272 ? A LYS 224 ? 1_555 NA ? E NA . ? A NA 300 ? 1_555 O ? G HOH . ? A HOH 713 ? 1_555 81.3 ? 15 O ? G HOH . ? A HOH 531 ? 1_555 NA ? E NA . ? A NA 300 ? 1_555 O ? G HOH . ? A HOH 713 ? 1_555 88.2 ? 16 O ? G HOH . ? A HOH 595 ? 1_555 NA ? E NA . ? A NA 300 ? 1_555 O ? G HOH . ? A HOH 713 ? 1_555 172.7 ? 17 O ? A ARG 269 ? A ARG 221 A 1_555 NA ? E NA . ? A NA 300 ? 1_555 O ? G HOH . ? A HOH 714 ? 1_555 110.8 ? 18 O ? A LYS 272 ? A LYS 224 ? 1_555 NA ? E NA . ? A NA 300 ? 1_555 O ? G HOH . ? A HOH 714 ? 1_555 158.8 ? 19 O ? G HOH . ? A HOH 531 ? 1_555 NA ? E NA . ? A NA 300 ? 1_555 O ? G HOH . ? A HOH 714 ? 1_555 90.8 ? 20 O ? G HOH . ? A HOH 595 ? 1_555 NA ? E NA . ? A NA 300 ? 1_555 O ? G HOH . ? A HOH 714 ? 1_555 88.3 ? 21 O ? G HOH . ? A HOH 713 ? 1_555 NA ? E NA . ? A NA 300 ? 1_555 O ? G HOH . ? A HOH 714 ? 1_555 94.8 ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id SER _struct_mon_prot_cis.label_seq_id 58 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code A _struct_mon_prot_cis.auth_comp_id SER _struct_mon_prot_cis.auth_seq_id 36 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 59 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 37 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -0.07 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 7 ? B ? 7 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel B 6 7 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 SER A 41 ? ASP A 42 ? SER A 20 ASP A 21 A 2 GLN A 197 ? PRO A 202 ? GLN A 156 PRO A 161 A 3 LYS A 171 ? GLY A 176 ? LYS A 135 GLY A 140 A 4 PRO A 244 ? LYS A 248 ? PRO A 198 LYS A 202 A 5 TRP A 255 ? TRP A 263 ? TRP A 207 TRP A 215 A 6 GLY A 274 ? HIS A 278 ? GLY A 226 HIS A 230 A 7 MET A 221 ? ALA A 224 ? MET A 180 ALA A 183 B 1 GLN A 51 ? ARG A 56 ? GLN A 30 ARG A 35 B 2 GLU A 61 ? LEU A 68 ? GLU A 39 LEU A 46 B 3 TRP A 73 ? THR A 76 ? TRP A 51 THR A 54 B 4 ALA A 137 ? LEU A 141 ? ALA A 104 LEU A 108 B 5 LYS A 113 ? ILE A 122 ? LYS A 81 ILE A 90 B 6 LEU A 95 ? ILE A 99 ? LEU A 64 ILE A 68 B 7 GLN A 51 ? ARG A 56 ? GLN A 30 ARG A 35 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O SER A 41 ? O SER A 20 N VAL A 198 ? N VAL A 157 A 2 3 O LEU A 201 ? O LEU A 160 N GLY A 172 ? N GLY A 136 A 3 4 N THR A 175 ? N THR A 139 O PRO A 244 ? O PRO A 198 A 4 5 O MET A 247 ? O MET A 201 N TYR A 256 ? N TYR A 208 A 5 6 O TRP A 263 ? O TRP A 215 N PHE A 275 ? N PHE A 227 A 6 7 N TYR A 276 ? N TYR A 228 O PHE A 222 ? O PHE A 181 B 1 2 N ARG A 56 ? N ARG A 35 O GLU A 61 ? O GLU A 39 B 2 3 O SER A 67 ? O SER A 45 N LEU A 75 ? N LEU A 53 B 3 4 O THR A 76 ? O THR A 54 N ALA A 137 ? N ALA A 104 B 4 5 O LYS A 140 ? O LYS A 107 N GLU A 118 ? N GLU A 86 B 5 6 N LEU A 117 ? N LEU A 85 O LEU A 95 ? O LEU A 64 B 6 7 N ARG A 98 ? N ARG A 67 O MET A 53 ? O MET A 32 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PHE A 1 G ? -144.81 -15.98 2 1 PHE A 7 ? ? -132.94 -86.97 3 1 ASN A 60 G ? -163.05 84.37 4 1 HIS A 71 ? ? -130.71 -57.54 5 1 ILE A 79 ? ? -120.15 -57.99 6 1 GLU A 97 A ? -107.42 -69.60 7 1 SER A 214 ? ? -109.61 -69.79 # loop_ _pdbx_validate_chiral.id _pdbx_validate_chiral.PDB_model_num _pdbx_validate_chiral.auth_atom_id _pdbx_validate_chiral.label_alt_id _pdbx_validate_chiral.auth_asym_id _pdbx_validate_chiral.auth_comp_id _pdbx_validate_chiral.auth_seq_id _pdbx_validate_chiral.PDB_ins_code _pdbx_validate_chiral.details _pdbx_validate_chiral.omega 1 1 C2 ? A NAG 250 ? PLANAR . 2 1 C3 ? A NAG 250 ? PLANAR . 3 1 C4 ? A NAG 250 ? PLANAR . # _pdbx_molecule_features.prd_id PRD_000623 _pdbx_molecule_features.name RWJ-51438 _pdbx_molecule_features.type Peptide-like _pdbx_molecule_features.class 'Thrombin inhibitor' _pdbx_molecule_features.details ? # _pdbx_molecule.instance_id 1 _pdbx_molecule.prd_id PRD_000623 _pdbx_molecule.asym_id C # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A ASN 89 A ASN 60 G ASN 'GLYCOSYLATION SITE' 2 B TYS 9 B TYS 363 ? TYR O-SULFO-L-TYROSINE # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 14 L A GLY 35 2 1 Y 1 A ARG 15 ? A ARG 36 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 1Z0 N N N N 1 1Z0 C3 C N R 2 1Z0 C C N N 3 1Z0 O O N N 4 1Z0 "C'" C N N 5 1Z0 "C1'" C Y N 6 1Z0 "C2'" C Y N 7 1Z0 "C6'" C Y N 8 1Z0 "C3'" C Y N 9 1Z0 "C5'" C Y N 10 1Z0 "C4'" C Y N 11 1Z0 C1 C N N 12 1Z0 N1 N N N 13 1Z0 CA C N S 14 1Z0 C2 C N N 15 1Z0 O1 O N N 16 1Z0 CB C N N 17 1Z0 CG C N N 18 1Z0 CD C N N 19 1Z0 N2 N N N 20 1Z0 CA1 C N S 21 1Z0 CB1 C N N 22 1Z0 CG1 C N N 23 1Z0 CD1 C N N 24 1Z0 NE N N N 25 1Z0 CZ C N N 26 1Z0 NH1 N N N 27 1Z0 NH2 N N N 28 1Z0 N5 N Y N 29 1Z0 S5 S Y N 30 1Z0 C5 C Y N 31 1Z0 C61 C Y N 32 1Z0 C62 C Y N 33 1Z0 C63 C Y N 34 1Z0 C64 C Y N 35 1Z0 C65 C Y N 36 1Z0 C66 C Y N 37 1Z0 C11 C N N 38 1Z0 O11 O N N 39 1Z0 O2 O N N 40 1Z0 O3 O N N 41 1Z0 C4 C N N 42 1Z0 H H N N 43 1Z0 H3 H N N 44 1Z0 "H'C1" H N N 45 1Z0 "H'C2" H N N 46 1Z0 "H2'" H N N 47 1Z0 "H6'" H N N 48 1Z0 "H3'" H N N 49 1Z0 "H5'" H N N 50 1Z0 "H4'" H N N 51 1Z0 H1C1 H N N 52 1Z0 H1C2 H N N 53 1Z0 H1C3 H N N 54 1Z0 HA H N N 55 1Z0 HB2 H N N 56 1Z0 HB3 H N N 57 1Z0 HG2 H N N 58 1Z0 HG3 H N N 59 1Z0 HD2 H N N 60 1Z0 HD3 H N N 61 1Z0 H1 H N N 62 1Z0 HA1 H N N 63 1Z0 HB1 H N N 64 1Z0 HB21 H N N 65 1Z0 HG1 H N N 66 1Z0 HG21 H N N 67 1Z0 HD1 H N N 68 1Z0 HD21 H N N 69 1Z0 HE H N N 70 1Z0 HH11 H N N 71 1Z0 HH21 H N N 72 1Z0 HH22 H N N 73 1Z0 H63 H N N 74 1Z0 H65 H N N 75 1Z0 H66 H N N 76 1Z0 HO21 H N N 77 ALA N N N N 78 ALA CA C N S 79 ALA C C N N 80 ALA O O N N 81 ALA CB C N N 82 ALA OXT O N N 83 ALA H H N N 84 ALA H2 H N N 85 ALA HA H N N 86 ALA HB1 H N N 87 ALA HB2 H N N 88 ALA HB3 H N N 89 ALA HXT H N N 90 ARG N N N N 91 ARG CA C N S 92 ARG C C N N 93 ARG O O N N 94 ARG CB C N N 95 ARG CG C N N 96 ARG CD C N N 97 ARG NE N N N 98 ARG CZ C N N 99 ARG NH1 N N N 100 ARG NH2 N N N 101 ARG OXT O N N 102 ARG H H N N 103 ARG H2 H N N 104 ARG HA H N N 105 ARG HB2 H N N 106 ARG HB3 H N N 107 ARG HG2 H N N 108 ARG HG3 H N N 109 ARG HD2 H N N 110 ARG HD3 H N N 111 ARG HE H N N 112 ARG HH11 H N N 113 ARG HH12 H N N 114 ARG HH21 H N N 115 ARG HH22 H N N 116 ARG HXT H N N 117 ASN N N N N 118 ASN CA C N S 119 ASN C C N N 120 ASN O O N N 121 ASN CB C N N 122 ASN CG C N N 123 ASN OD1 O N N 124 ASN ND2 N N N 125 ASN OXT O N N 126 ASN H H N N 127 ASN H2 H N N 128 ASN HA H N N 129 ASN HB2 H N N 130 ASN HB3 H N N 131 ASN HD21 H N N 132 ASN HD22 H N N 133 ASN HXT H N N 134 ASP N N N N 135 ASP CA C N S 136 ASP C C N N 137 ASP O O N N 138 ASP CB C N N 139 ASP CG C N N 140 ASP OD1 O N N 141 ASP OD2 O N N 142 ASP OXT O N N 143 ASP H H N N 144 ASP H2 H N N 145 ASP HA H N N 146 ASP HB2 H N N 147 ASP HB3 H N N 148 ASP HD2 H N N 149 ASP HXT H N N 150 CYS N N N N 151 CYS CA C N R 152 CYS C C N N 153 CYS O O N N 154 CYS CB C N N 155 CYS SG S N N 156 CYS OXT O N N 157 CYS H H N N 158 CYS H2 H N N 159 CYS HA H N N 160 CYS HB2 H N N 161 CYS HB3 H N N 162 CYS HG H N N 163 CYS HXT H N N 164 GLN N N N N 165 GLN CA C N S 166 GLN C C N N 167 GLN O O N N 168 GLN CB C N N 169 GLN CG C N N 170 GLN CD C N N 171 GLN OE1 O N N 172 GLN NE2 N N N 173 GLN OXT O N N 174 GLN H H N N 175 GLN H2 H N N 176 GLN HA H N N 177 GLN HB2 H N N 178 GLN HB3 H N N 179 GLN HG2 H N N 180 GLN HG3 H N N 181 GLN HE21 H N N 182 GLN HE22 H N N 183 GLN HXT H N N 184 GLU N N N N 185 GLU CA C N S 186 GLU C C N N 187 GLU O O N N 188 GLU CB C N N 189 GLU CG C N N 190 GLU CD C N N 191 GLU OE1 O N N 192 GLU OE2 O N N 193 GLU OXT O N N 194 GLU H H N N 195 GLU H2 H N N 196 GLU HA H N N 197 GLU HB2 H N N 198 GLU HB3 H N N 199 GLU HG2 H N N 200 GLU HG3 H N N 201 GLU HE2 H N N 202 GLU HXT H N N 203 GLY N N N N 204 GLY CA C N N 205 GLY C C N N 206 GLY O O N N 207 GLY OXT O N N 208 GLY H H N N 209 GLY H2 H N N 210 GLY HA2 H N N 211 GLY HA3 H N N 212 GLY HXT H N N 213 HIS N N N N 214 HIS CA C N S 215 HIS C C N N 216 HIS O O N N 217 HIS CB C N N 218 HIS CG C Y N 219 HIS ND1 N Y N 220 HIS CD2 C Y N 221 HIS CE1 C Y N 222 HIS NE2 N Y N 223 HIS OXT O N N 224 HIS H H N N 225 HIS H2 H N N 226 HIS HA H N N 227 HIS HB2 H N N 228 HIS HB3 H N N 229 HIS HD1 H N N 230 HIS HD2 H N N 231 HIS HE1 H N N 232 HIS HE2 H N N 233 HIS HXT H N N 234 HOH O O N N 235 HOH H1 H N N 236 HOH H2 H N N 237 ILE N N N N 238 ILE CA C N S 239 ILE C C N N 240 ILE O O N N 241 ILE CB C N S 242 ILE CG1 C N N 243 ILE CG2 C N N 244 ILE CD1 C N N 245 ILE OXT O N N 246 ILE H H N N 247 ILE H2 H N N 248 ILE HA H N N 249 ILE HB H N N 250 ILE HG12 H N N 251 ILE HG13 H N N 252 ILE HG21 H N N 253 ILE HG22 H N N 254 ILE HG23 H N N 255 ILE HD11 H N N 256 ILE HD12 H N N 257 ILE HD13 H N N 258 ILE HXT H N N 259 LEU N N N N 260 LEU CA C N S 261 LEU C C N N 262 LEU O O N N 263 LEU CB C N N 264 LEU CG C N N 265 LEU CD1 C N N 266 LEU CD2 C N N 267 LEU OXT O N N 268 LEU H H N N 269 LEU H2 H N N 270 LEU HA H N N 271 LEU HB2 H N N 272 LEU HB3 H N N 273 LEU HG H N N 274 LEU HD11 H N N 275 LEU HD12 H N N 276 LEU HD13 H N N 277 LEU HD21 H N N 278 LEU HD22 H N N 279 LEU HD23 H N N 280 LEU HXT H N N 281 LYS N N N N 282 LYS CA C N S 283 LYS C C N N 284 LYS O O N N 285 LYS CB C N N 286 LYS CG C N N 287 LYS CD C N N 288 LYS CE C N N 289 LYS NZ N N N 290 LYS OXT O N N 291 LYS H H N N 292 LYS H2 H N N 293 LYS HA H N N 294 LYS HB2 H N N 295 LYS HB3 H N N 296 LYS HG2 H N N 297 LYS HG3 H N N 298 LYS HD2 H N N 299 LYS HD3 H N N 300 LYS HE2 H N N 301 LYS HE3 H N N 302 LYS HZ1 H N N 303 LYS HZ2 H N N 304 LYS HZ3 H N N 305 LYS HXT H N N 306 MET N N N N 307 MET CA C N S 308 MET C C N N 309 MET O O N N 310 MET CB C N N 311 MET CG C N N 312 MET SD S N N 313 MET CE C N N 314 MET OXT O N N 315 MET H H N N 316 MET H2 H N N 317 MET HA H N N 318 MET HB2 H N N 319 MET HB3 H N N 320 MET HG2 H N N 321 MET HG3 H N N 322 MET HE1 H N N 323 MET HE2 H N N 324 MET HE3 H N N 325 MET HXT H N N 326 NA NA NA N N 327 NAG C1 C N R 328 NAG C2 C N R 329 NAG C3 C N R 330 NAG C4 C N S 331 NAG C5 C N R 332 NAG C6 C N N 333 NAG C7 C N N 334 NAG C8 C N N 335 NAG N2 N N N 336 NAG O1 O N N 337 NAG O3 O N N 338 NAG O4 O N N 339 NAG O5 O N N 340 NAG O6 O N N 341 NAG O7 O N N 342 NAG H1 H N N 343 NAG H2 H N N 344 NAG H3 H N N 345 NAG H4 H N N 346 NAG H5 H N N 347 NAG H61 H N N 348 NAG H62 H N N 349 NAG H81 H N N 350 NAG H82 H N N 351 NAG H83 H N N 352 NAG HN2 H N N 353 NAG HO1 H N N 354 NAG HO3 H N N 355 NAG HO4 H N N 356 NAG HO6 H N N 357 PHE N N N N 358 PHE CA C N S 359 PHE C C N N 360 PHE O O N N 361 PHE CB C N N 362 PHE CG C Y N 363 PHE CD1 C Y N 364 PHE CD2 C Y N 365 PHE CE1 C Y N 366 PHE CE2 C Y N 367 PHE CZ C Y N 368 PHE OXT O N N 369 PHE H H N N 370 PHE H2 H N N 371 PHE HA H N N 372 PHE HB2 H N N 373 PHE HB3 H N N 374 PHE HD1 H N N 375 PHE HD2 H N N 376 PHE HE1 H N N 377 PHE HE2 H N N 378 PHE HZ H N N 379 PHE HXT H N N 380 PRO N N N N 381 PRO CA C N S 382 PRO C C N N 383 PRO O O N N 384 PRO CB C N N 385 PRO CG C N N 386 PRO CD C N N 387 PRO OXT O N N 388 PRO H H N N 389 PRO HA H N N 390 PRO HB2 H N N 391 PRO HB3 H N N 392 PRO HG2 H N N 393 PRO HG3 H N N 394 PRO HD2 H N N 395 PRO HD3 H N N 396 PRO HXT H N N 397 SER N N N N 398 SER CA C N S 399 SER C C N N 400 SER O O N N 401 SER CB C N N 402 SER OG O N N 403 SER OXT O N N 404 SER H H N N 405 SER H2 H N N 406 SER HA H N N 407 SER HB2 H N N 408 SER HB3 H N N 409 SER HG H N N 410 SER HXT H N N 411 THR N N N N 412 THR CA C N S 413 THR C C N N 414 THR O O N N 415 THR CB C N R 416 THR OG1 O N N 417 THR CG2 C N N 418 THR OXT O N N 419 THR H H N N 420 THR H2 H N N 421 THR HA H N N 422 THR HB H N N 423 THR HG1 H N N 424 THR HG21 H N N 425 THR HG22 H N N 426 THR HG23 H N N 427 THR HXT H N N 428 TRP N N N N 429 TRP CA C N S 430 TRP C C N N 431 TRP O O N N 432 TRP CB C N N 433 TRP CG C Y N 434 TRP CD1 C Y N 435 TRP CD2 C Y N 436 TRP NE1 N Y N 437 TRP CE2 C Y N 438 TRP CE3 C Y N 439 TRP CZ2 C Y N 440 TRP CZ3 C Y N 441 TRP CH2 C Y N 442 TRP OXT O N N 443 TRP H H N N 444 TRP H2 H N N 445 TRP HA H N N 446 TRP HB2 H N N 447 TRP HB3 H N N 448 TRP HD1 H N N 449 TRP HE1 H N N 450 TRP HE3 H N N 451 TRP HZ2 H N N 452 TRP HZ3 H N N 453 TRP HH2 H N N 454 TRP HXT H N N 455 TYR N N N N 456 TYR CA C N S 457 TYR C C N N 458 TYR O O N N 459 TYR CB C N N 460 TYR CG C Y N 461 TYR CD1 C Y N 462 TYR CD2 C Y N 463 TYR CE1 C Y N 464 TYR CE2 C Y N 465 TYR CZ C Y N 466 TYR OH O N N 467 TYR OXT O N N 468 TYR H H N N 469 TYR H2 H N N 470 TYR HA H N N 471 TYR HB2 H N N 472 TYR HB3 H N N 473 TYR HD1 H N N 474 TYR HD2 H N N 475 TYR HE1 H N N 476 TYR HE2 H N N 477 TYR HH H N N 478 TYR HXT H N N 479 TYS N N N N 480 TYS CA C N S 481 TYS CB C N N 482 TYS CG C Y N 483 TYS CD1 C Y N 484 TYS CD2 C Y N 485 TYS CE1 C Y N 486 TYS CE2 C Y N 487 TYS CZ C Y N 488 TYS OH O N N 489 TYS S S N N 490 TYS O1 O N N 491 TYS O2 O N N 492 TYS O3 O N N 493 TYS C C N N 494 TYS O O N N 495 TYS OXT O N N 496 TYS H H N N 497 TYS H2 H N N 498 TYS HA H N N 499 TYS HB2 H N N 500 TYS HB3 H N N 501 TYS HD1 H N N 502 TYS HD2 H N N 503 TYS HE1 H N N 504 TYS HE2 H N N 505 TYS HO3 H N N 506 TYS HXT H N N 507 VAL N N N N 508 VAL CA C N S 509 VAL C C N N 510 VAL O O N N 511 VAL CB C N N 512 VAL CG1 C N N 513 VAL CG2 C N N 514 VAL OXT O N N 515 VAL H H N N 516 VAL H2 H N N 517 VAL HA H N N 518 VAL HB H N N 519 VAL HG11 H N N 520 VAL HG12 H N N 521 VAL HG13 H N N 522 VAL HG21 H N N 523 VAL HG22 H N N 524 VAL HG23 H N N 525 VAL HXT H N N 526 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 1Z0 C1 N sing N N 1 1Z0 C1 H1C1 sing N N 2 1Z0 C1 H1C2 sing N N 3 1Z0 C1 H1C3 sing N N 4 1Z0 N C3 sing N N 5 1Z0 N H sing N N 6 1Z0 C3 C sing N N 7 1Z0 C3 "C'" sing N N 8 1Z0 C3 H3 sing N N 9 1Z0 C O doub N N 10 1Z0 "C'" "C1'" sing N N 11 1Z0 "C'" "H'C1" sing N N 12 1Z0 "C'" "H'C2" sing N N 13 1Z0 "C1'" "C2'" doub Y N 14 1Z0 "C1'" "C6'" sing Y N 15 1Z0 "C2'" "C3'" sing Y N 16 1Z0 "C2'" "H2'" sing N N 17 1Z0 "C3'" "C4'" doub Y N 18 1Z0 "C3'" "H3'" sing N N 19 1Z0 "C4'" "C5'" sing Y N 20 1Z0 "C4'" "H4'" sing N N 21 1Z0 "C5'" "C6'" doub Y N 22 1Z0 "C5'" "H5'" sing N N 23 1Z0 "C6'" "H6'" sing N N 24 1Z0 N1 CA sing N N 25 1Z0 N1 CD sing N N 26 1Z0 CA C2 sing N N 27 1Z0 CA CB sing N N 28 1Z0 CA HA sing N N 29 1Z0 C2 O1 doub N N 30 1Z0 CB CG sing N N 31 1Z0 CB HB2 sing N N 32 1Z0 CB HB3 sing N N 33 1Z0 CG CD sing N N 34 1Z0 CG HG2 sing N N 35 1Z0 CG HG3 sing N N 36 1Z0 CD HD2 sing N N 37 1Z0 CD HD3 sing N N 38 1Z0 N2 CA1 sing N N 39 1Z0 N2 H1 sing N N 40 1Z0 CA1 CB1 sing N N 41 1Z0 CA1 C4 sing N N 42 1Z0 CA1 HA1 sing N N 43 1Z0 CB1 CG1 sing N N 44 1Z0 CB1 HB1 sing N N 45 1Z0 CB1 HB21 sing N N 46 1Z0 CG1 CD1 sing N N 47 1Z0 CG1 HG1 sing N N 48 1Z0 CG1 HG21 sing N N 49 1Z0 CD1 NE sing N N 50 1Z0 CD1 HD1 sing N N 51 1Z0 CD1 HD21 sing N N 52 1Z0 NE CZ sing N N 53 1Z0 NE HE sing N N 54 1Z0 CZ NH1 doub N N 55 1Z0 CZ NH2 sing N N 56 1Z0 NH1 HH11 sing N N 57 1Z0 NH2 HH21 sing N N 58 1Z0 NH2 HH22 sing N N 59 1Z0 N5 C5 doub Y N 60 1Z0 N5 C61 sing Y N 61 1Z0 S5 C5 sing Y N 62 1Z0 S5 C62 sing Y N 63 1Z0 C5 C4 sing N N 64 1Z0 C61 C62 doub Y N 65 1Z0 C61 C66 sing Y N 66 1Z0 C62 C63 sing Y N 67 1Z0 C63 C64 doub Y N 68 1Z0 C63 H63 sing N N 69 1Z0 C64 C65 sing Y N 70 1Z0 C64 C11 sing N N 71 1Z0 C65 C66 doub Y N 72 1Z0 C65 H65 sing N N 73 1Z0 C66 H66 sing N N 74 1Z0 C11 O11 doub N N 75 1Z0 C11 O2 sing N N 76 1Z0 O2 HO21 sing N N 77 1Z0 O3 C4 doub N N 78 1Z0 C N1 sing N N 79 1Z0 C2 N2 sing N N 80 ALA N CA sing N N 81 ALA N H sing N N 82 ALA N H2 sing N N 83 ALA CA C sing N N 84 ALA CA CB sing N N 85 ALA CA HA sing N N 86 ALA C O doub N N 87 ALA C OXT sing N N 88 ALA CB HB1 sing N N 89 ALA CB HB2 sing N N 90 ALA CB HB3 sing N N 91 ALA OXT HXT sing N N 92 ARG N CA sing N N 93 ARG N H sing N N 94 ARG N H2 sing N N 95 ARG CA C sing N N 96 ARG CA CB sing N N 97 ARG CA HA sing N N 98 ARG C O doub N N 99 ARG C OXT sing N N 100 ARG CB CG sing N N 101 ARG CB HB2 sing N N 102 ARG CB HB3 sing N N 103 ARG CG CD sing N N 104 ARG CG HG2 sing N N 105 ARG CG HG3 sing N N 106 ARG CD NE sing N N 107 ARG CD HD2 sing N N 108 ARG CD HD3 sing N N 109 ARG NE CZ sing N N 110 ARG NE HE sing N N 111 ARG CZ NH1 sing N N 112 ARG CZ NH2 doub N N 113 ARG NH1 HH11 sing N N 114 ARG NH1 HH12 sing N N 115 ARG NH2 HH21 sing N N 116 ARG NH2 HH22 sing N N 117 ARG OXT HXT sing N N 118 ASN N CA sing N N 119 ASN N H sing N N 120 ASN N H2 sing N N 121 ASN CA C sing N N 122 ASN CA CB sing N N 123 ASN CA HA sing N N 124 ASN C O doub N N 125 ASN C OXT sing N N 126 ASN CB CG sing N N 127 ASN CB HB2 sing N N 128 ASN CB HB3 sing N N 129 ASN CG OD1 doub N N 130 ASN CG ND2 sing N N 131 ASN ND2 HD21 sing N N 132 ASN ND2 HD22 sing N N 133 ASN OXT HXT sing N N 134 ASP N CA sing N N 135 ASP N H sing N N 136 ASP N H2 sing N N 137 ASP CA C sing N N 138 ASP CA CB sing N N 139 ASP CA HA sing N N 140 ASP C O doub N N 141 ASP C OXT sing N N 142 ASP CB CG sing N N 143 ASP CB HB2 sing N N 144 ASP CB HB3 sing N N 145 ASP CG OD1 doub N N 146 ASP CG OD2 sing N N 147 ASP OD2 HD2 sing N N 148 ASP OXT HXT sing N N 149 CYS N CA sing N N 150 CYS N H sing N N 151 CYS N H2 sing N N 152 CYS CA C sing N N 153 CYS CA CB sing N N 154 CYS CA HA sing N N 155 CYS C O doub N N 156 CYS C OXT sing N N 157 CYS CB SG sing N N 158 CYS CB HB2 sing N N 159 CYS CB HB3 sing N N 160 CYS SG HG sing N N 161 CYS OXT HXT sing N N 162 GLN N CA sing N N 163 GLN N H sing N N 164 GLN N H2 sing N N 165 GLN CA C sing N N 166 GLN CA CB sing N N 167 GLN CA HA sing N N 168 GLN C O doub N N 169 GLN C OXT sing N N 170 GLN CB CG sing N N 171 GLN CB HB2 sing N N 172 GLN CB HB3 sing N N 173 GLN CG CD sing N N 174 GLN CG HG2 sing N N 175 GLN CG HG3 sing N N 176 GLN CD OE1 doub N N 177 GLN CD NE2 sing N N 178 GLN NE2 HE21 sing N N 179 GLN NE2 HE22 sing N N 180 GLN OXT HXT sing N N 181 GLU N CA sing N N 182 GLU N H sing N N 183 GLU N H2 sing N N 184 GLU CA C sing N N 185 GLU CA CB sing N N 186 GLU CA HA sing N N 187 GLU C O doub N N 188 GLU C OXT sing N N 189 GLU CB CG sing N N 190 GLU CB HB2 sing N N 191 GLU CB HB3 sing N N 192 GLU CG CD sing N N 193 GLU CG HG2 sing N N 194 GLU CG HG3 sing N N 195 GLU CD OE1 doub N N 196 GLU CD OE2 sing N N 197 GLU OE2 HE2 sing N N 198 GLU OXT HXT sing N N 199 GLY N CA sing N N 200 GLY N H sing N N 201 GLY N H2 sing N N 202 GLY CA C sing N N 203 GLY CA HA2 sing N N 204 GLY CA HA3 sing N N 205 GLY C O doub N N 206 GLY C OXT sing N N 207 GLY OXT HXT sing N N 208 HIS N CA sing N N 209 HIS N H sing N N 210 HIS N H2 sing N N 211 HIS CA C sing N N 212 HIS CA CB sing N N 213 HIS CA HA sing N N 214 HIS C O doub N N 215 HIS C OXT sing N N 216 HIS CB CG sing N N 217 HIS CB HB2 sing N N 218 HIS CB HB3 sing N N 219 HIS CG ND1 sing Y N 220 HIS CG CD2 doub Y N 221 HIS ND1 CE1 doub Y N 222 HIS ND1 HD1 sing N N 223 HIS CD2 NE2 sing Y N 224 HIS CD2 HD2 sing N N 225 HIS CE1 NE2 sing Y N 226 HIS CE1 HE1 sing N N 227 HIS NE2 HE2 sing N N 228 HIS OXT HXT sing N N 229 HOH O H1 sing N N 230 HOH O H2 sing N N 231 ILE N CA sing N N 232 ILE N H sing N N 233 ILE N H2 sing N N 234 ILE CA C sing N N 235 ILE CA CB sing N N 236 ILE CA HA sing N N 237 ILE C O doub N N 238 ILE C OXT sing N N 239 ILE CB CG1 sing N N 240 ILE CB CG2 sing N N 241 ILE CB HB sing N N 242 ILE CG1 CD1 sing N N 243 ILE CG1 HG12 sing N N 244 ILE CG1 HG13 sing N N 245 ILE CG2 HG21 sing N N 246 ILE CG2 HG22 sing N N 247 ILE CG2 HG23 sing N N 248 ILE CD1 HD11 sing N N 249 ILE CD1 HD12 sing N N 250 ILE CD1 HD13 sing N N 251 ILE OXT HXT sing N N 252 LEU N CA sing N N 253 LEU N H sing N N 254 LEU N H2 sing N N 255 LEU CA C sing N N 256 LEU CA CB sing N N 257 LEU CA HA sing N N 258 LEU C O doub N N 259 LEU C OXT sing N N 260 LEU CB CG sing N N 261 LEU CB HB2 sing N N 262 LEU CB HB3 sing N N 263 LEU CG CD1 sing N N 264 LEU CG CD2 sing N N 265 LEU CG HG sing N N 266 LEU CD1 HD11 sing N N 267 LEU CD1 HD12 sing N N 268 LEU CD1 HD13 sing N N 269 LEU CD2 HD21 sing N N 270 LEU CD2 HD22 sing N N 271 LEU CD2 HD23 sing N N 272 LEU OXT HXT sing N N 273 LYS N CA sing N N 274 LYS N H sing N N 275 LYS N H2 sing N N 276 LYS CA C sing N N 277 LYS CA CB sing N N 278 LYS CA HA sing N N 279 LYS C O doub N N 280 LYS C OXT sing N N 281 LYS CB CG sing N N 282 LYS CB HB2 sing N N 283 LYS CB HB3 sing N N 284 LYS CG CD sing N N 285 LYS CG HG2 sing N N 286 LYS CG HG3 sing N N 287 LYS CD CE sing N N 288 LYS CD HD2 sing N N 289 LYS CD HD3 sing N N 290 LYS CE NZ sing N N 291 LYS CE HE2 sing N N 292 LYS CE HE3 sing N N 293 LYS NZ HZ1 sing N N 294 LYS NZ HZ2 sing N N 295 LYS NZ HZ3 sing N N 296 LYS OXT HXT sing N N 297 MET N CA sing N N 298 MET N H sing N N 299 MET N H2 sing N N 300 MET CA C sing N N 301 MET CA CB sing N N 302 MET CA HA sing N N 303 MET C O doub N N 304 MET C OXT sing N N 305 MET CB CG sing N N 306 MET CB HB2 sing N N 307 MET CB HB3 sing N N 308 MET CG SD sing N N 309 MET CG HG2 sing N N 310 MET CG HG3 sing N N 311 MET SD CE sing N N 312 MET CE HE1 sing N N 313 MET CE HE2 sing N N 314 MET CE HE3 sing N N 315 MET OXT HXT sing N N 316 NAG C1 C2 sing N N 317 NAG C1 O1 sing N N 318 NAG C1 O5 sing N N 319 NAG C1 H1 sing N N 320 NAG C2 C3 sing N N 321 NAG C2 N2 sing N N 322 NAG C2 H2 sing N N 323 NAG C3 C4 sing N N 324 NAG C3 O3 sing N N 325 NAG C3 H3 sing N N 326 NAG C4 C5 sing N N 327 NAG C4 O4 sing N N 328 NAG C4 H4 sing N N 329 NAG C5 C6 sing N N 330 NAG C5 O5 sing N N 331 NAG C5 H5 sing N N 332 NAG C6 O6 sing N N 333 NAG C6 H61 sing N N 334 NAG C6 H62 sing N N 335 NAG C7 C8 sing N N 336 NAG C7 N2 sing N N 337 NAG C7 O7 doub N N 338 NAG C8 H81 sing N N 339 NAG C8 H82 sing N N 340 NAG C8 H83 sing N N 341 NAG N2 HN2 sing N N 342 NAG O1 HO1 sing N N 343 NAG O3 HO3 sing N N 344 NAG O4 HO4 sing N N 345 NAG O6 HO6 sing N N 346 PHE N CA sing N N 347 PHE N H sing N N 348 PHE N H2 sing N N 349 PHE CA C sing N N 350 PHE CA CB sing N N 351 PHE CA HA sing N N 352 PHE C O doub N N 353 PHE C OXT sing N N 354 PHE CB CG sing N N 355 PHE CB HB2 sing N N 356 PHE CB HB3 sing N N 357 PHE CG CD1 doub Y N 358 PHE CG CD2 sing Y N 359 PHE CD1 CE1 sing Y N 360 PHE CD1 HD1 sing N N 361 PHE CD2 CE2 doub Y N 362 PHE CD2 HD2 sing N N 363 PHE CE1 CZ doub Y N 364 PHE CE1 HE1 sing N N 365 PHE CE2 CZ sing Y N 366 PHE CE2 HE2 sing N N 367 PHE CZ HZ sing N N 368 PHE OXT HXT sing N N 369 PRO N CA sing N N 370 PRO N CD sing N N 371 PRO N H sing N N 372 PRO CA C sing N N 373 PRO CA CB sing N N 374 PRO CA HA sing N N 375 PRO C O doub N N 376 PRO C OXT sing N N 377 PRO CB CG sing N N 378 PRO CB HB2 sing N N 379 PRO CB HB3 sing N N 380 PRO CG CD sing N N 381 PRO CG HG2 sing N N 382 PRO CG HG3 sing N N 383 PRO CD HD2 sing N N 384 PRO CD HD3 sing N N 385 PRO OXT HXT sing N N 386 SER N CA sing N N 387 SER N H sing N N 388 SER N H2 sing N N 389 SER CA C sing N N 390 SER CA CB sing N N 391 SER CA HA sing N N 392 SER C O doub N N 393 SER C OXT sing N N 394 SER CB OG sing N N 395 SER CB HB2 sing N N 396 SER CB HB3 sing N N 397 SER OG HG sing N N 398 SER OXT HXT sing N N 399 THR N CA sing N N 400 THR N H sing N N 401 THR N H2 sing N N 402 THR CA C sing N N 403 THR CA CB sing N N 404 THR CA HA sing N N 405 THR C O doub N N 406 THR C OXT sing N N 407 THR CB OG1 sing N N 408 THR CB CG2 sing N N 409 THR CB HB sing N N 410 THR OG1 HG1 sing N N 411 THR CG2 HG21 sing N N 412 THR CG2 HG22 sing N N 413 THR CG2 HG23 sing N N 414 THR OXT HXT sing N N 415 TRP N CA sing N N 416 TRP N H sing N N 417 TRP N H2 sing N N 418 TRP CA C sing N N 419 TRP CA CB sing N N 420 TRP CA HA sing N N 421 TRP C O doub N N 422 TRP C OXT sing N N 423 TRP CB CG sing N N 424 TRP CB HB2 sing N N 425 TRP CB HB3 sing N N 426 TRP CG CD1 doub Y N 427 TRP CG CD2 sing Y N 428 TRP CD1 NE1 sing Y N 429 TRP CD1 HD1 sing N N 430 TRP CD2 CE2 doub Y N 431 TRP CD2 CE3 sing Y N 432 TRP NE1 CE2 sing Y N 433 TRP NE1 HE1 sing N N 434 TRP CE2 CZ2 sing Y N 435 TRP CE3 CZ3 doub Y N 436 TRP CE3 HE3 sing N N 437 TRP CZ2 CH2 doub Y N 438 TRP CZ2 HZ2 sing N N 439 TRP CZ3 CH2 sing Y N 440 TRP CZ3 HZ3 sing N N 441 TRP CH2 HH2 sing N N 442 TRP OXT HXT sing N N 443 TYR N CA sing N N 444 TYR N H sing N N 445 TYR N H2 sing N N 446 TYR CA C sing N N 447 TYR CA CB sing N N 448 TYR CA HA sing N N 449 TYR C O doub N N 450 TYR C OXT sing N N 451 TYR CB CG sing N N 452 TYR CB HB2 sing N N 453 TYR CB HB3 sing N N 454 TYR CG CD1 doub Y N 455 TYR CG CD2 sing Y N 456 TYR CD1 CE1 sing Y N 457 TYR CD1 HD1 sing N N 458 TYR CD2 CE2 doub Y N 459 TYR CD2 HD2 sing N N 460 TYR CE1 CZ doub Y N 461 TYR CE1 HE1 sing N N 462 TYR CE2 CZ sing Y N 463 TYR CE2 HE2 sing N N 464 TYR CZ OH sing N N 465 TYR OH HH sing N N 466 TYR OXT HXT sing N N 467 TYS N CA sing N N 468 TYS N H sing N N 469 TYS N H2 sing N N 470 TYS CA CB sing N N 471 TYS CA C sing N N 472 TYS CA HA sing N N 473 TYS CB CG sing N N 474 TYS CB HB2 sing N N 475 TYS CB HB3 sing N N 476 TYS CG CD1 doub Y N 477 TYS CG CD2 sing Y N 478 TYS CD1 CE1 sing Y N 479 TYS CD1 HD1 sing N N 480 TYS CD2 CE2 doub Y N 481 TYS CD2 HD2 sing N N 482 TYS CE1 CZ doub Y N 483 TYS CE1 HE1 sing N N 484 TYS CE2 CZ sing Y N 485 TYS CE2 HE2 sing N N 486 TYS CZ OH sing N N 487 TYS OH S sing N N 488 TYS S O1 doub N N 489 TYS S O2 doub N N 490 TYS S O3 sing N N 491 TYS O3 HO3 sing N N 492 TYS C O doub N N 493 TYS C OXT sing N N 494 TYS OXT HXT sing N N 495 VAL N CA sing N N 496 VAL N H sing N N 497 VAL N H2 sing N N 498 VAL CA C sing N N 499 VAL CA CB sing N N 500 VAL CA HA sing N N 501 VAL C O doub N N 502 VAL C OXT sing N N 503 VAL CB CG1 sing N N 504 VAL CB CG2 sing N N 505 VAL CB HB sing N N 506 VAL CG1 HG11 sing N N 507 VAL CG1 HG12 sing N N 508 VAL CG1 HG13 sing N N 509 VAL CG2 HG21 sing N N 510 VAL CG2 HG22 sing N N 511 VAL CG2 HG23 sing N N 512 VAL OXT HXT sing N N 513 # _atom_sites.entry_id 1DOJ _atom_sites.fract_transf_matrix[1][1] 0.015878 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.008509 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.020838 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N NA O S # loop_