data_1DSR # _entry.id 1DSR # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.381 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1DSR pdb_00001dsr 10.2210/pdb1dsr/pdb WWPDB D_1000172927 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1DSR _pdbx_database_status.recvd_initial_deposition_date 1996-07-05 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.SG_entry . _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Kurz, M.' 1 'Guba, W.' 2 # _citation.id primary _citation.title '3D Structure of Ramoplanin: A Potent Inhibitor of Bacterial Cell Wall Synthesis.' _citation.journal_abbrev Biochemistry _citation.journal_volume 35 _citation.page_first 12570 _citation.page_last ? _citation.year 1996 _citation.journal_id_ASTM BICHAW _citation.country US _citation.journal_id_ISSN 0006-2960 _citation.journal_id_CSD 0033 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 8823194 _citation.pdbx_database_id_DOI 10.1021/BI961017Q # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kurz, M.' 1 ? primary 'Guba, W.' 2 ? # _cell.entry_id 1DSR _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1DSR _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'RAMOPLANIN A2' 2111.610 1 ? ? ? ? 2 branched man 'alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose' 342.297 1 ? ? ? ? 3 non-polymer syn '(2Z,4E)-7-methylocta-2,4-dienoic acid' 154.206 1 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 'A-166686,MDL 62,198)' 2 2alpha-alpha-mannobiose # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code 'N(AHB)(GHP)(ORD)(2TL)(D4P)(GHP)(ALO)F(ORD)(D4P)(2TL)(D4P)GL(DAL)(CHP)' _entity_poly.pdbx_seq_one_letter_code_can NNGXTXGTFXXTXGLAG _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASN n 1 2 AHB n 1 3 GHP n 1 4 ORD n 1 5 2TL n 1 6 D4P n 1 7 GHP n 1 8 ALO n 1 9 PHE n 1 10 ORD n 1 11 D4P n 1 12 2TL n 1 13 D4P n 1 14 GLY n 1 15 LEU n 1 16 DAL n 1 17 CHP n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name ? _entity_src_nat.pdbx_organism_scientific 'ACTINOPLANES SP.' _entity_src_nat.pdbx_ncbi_taxonomy_id 1871 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain 'ATCC 33076' _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # _struct_ref.id 1 _struct_ref.db_name NOR _struct_ref.db_code NOR00844 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession NOR00844 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1DSR _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 17 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession NOR00844 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 17 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 17 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 2TL 'D-peptide linking' . D-allothreonine ? 'C4 H9 N O3' 119.119 AHB 'L-peptide linking' n BETA-HYDROXYASPARAGINE ? 'C4 H8 N2 O4' 148.117 ALO 'L-peptide linking' n ALLO-THREONINE ? 'C4 H9 N O3' 119.119 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 CHP 'L-peptide linking' n 3-CHLORO-4-HYDROXYPHENYLGLYCINE ? 'C8 H8 Cl N O3' 201.607 D4P 'L-peptide linking' . '(2S)-AMINO(4-HYDROXYPHENYL)ACETIC ACID' ? 'C8 H9 N O3' 167.162 DAL 'D-peptide linking' . D-ALANINE ? 'C3 H7 N O2' 89.093 FA7 non-polymer . '(2Z,4E)-7-methylocta-2,4-dienoic acid' ? 'C9 H14 O2' 154.206 GHP 'D-peptide linking' . '(2R)-amino(4-hydroxyphenyl)ethanoic acid' ? 'C8 H9 N O3' 167.162 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 MAN 'D-saccharide, alpha linking' . alpha-D-mannopyranose 'alpha-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156 ORD 'D-peptide linking' . D-ORNITHINE ? 'C5 H12 N2 O2' 132.161 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 # _pdbx_nmr_exptl.experiment_id 1 _pdbx_nmr_exptl.conditions_id 1 _pdbx_nmr_exptl.type NOESY _pdbx_nmr_exptl.solution_id 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 313 _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.pressure ? _pdbx_nmr_exptl_sample_conditions.pH 4.6 _pdbx_nmr_exptl_sample_conditions.ionic_strength ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model 'AMX 600' _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 600 _pdbx_nmr_spectrometer.type ? # _pdbx_nmr_ensemble.entry_id 1DSR _pdbx_nmr_ensemble.conformers_calculated_total_number 450 _pdbx_nmr_ensemble.conformers_submitted_total_number 6 _pdbx_nmr_ensemble.conformer_selection_criteria 'ENERGY MINIMIZED SNAPSHOT EVERY 75 PS' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _exptl.entry_id 1DSR _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 1DSR _struct.title 'Peptide antibiotic, NMR, 6 structures' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1DSR _struct_keywords.pdbx_keywords ANTIBIOTIC _struct_keywords.text 'RAMOPLANIN, ANTIBIOTIC, INHIBITOR, GLYCOLIPODESPSIPEPTIDE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? C FA7 . C1 ? ? ? 1_555 A ASN 1 N ? ? A FA7 0 A ASN 1 1_555 ? ? ? ? ? ? ? 1.338 ? ? covale2 covale both ? A ASN 1 C ? ? ? 1_555 A AHB 2 N ? ? A ASN 1 A AHB 2 1_555 ? ? ? ? ? ? ? 1.340 ? ? covale3 covale both ? A AHB 2 C ? ? ? 1_555 A GHP 3 N ? ? A AHB 2 A GHP 3 1_555 ? ? ? ? ? ? ? 1.339 ? ? covale4 covale one ? A AHB 2 OB ? ? ? 1_555 A CHP 17 C ? ? A AHB 2 A CHP 17 1_555 ? ? ? ? ? ? ? 1.397 ? ? covale5 covale both ? A GHP 3 C ? ? ? 1_555 A ORD 4 N ? ? A GHP 3 A ORD 4 1_555 ? ? ? ? ? ? ? 1.339 ? ? covale6 covale both ? A ORD 4 C ? ? ? 1_555 A 2TL 5 N ? ? A ORD 4 A 2TL 5 1_555 ? ? ? ? ? ? ? 1.339 ? ? covale7 covale both ? A 2TL 5 C ? ? ? 1_555 A D4P 6 N ? ? A 2TL 5 A D4P 6 1_555 ? ? ? ? ? ? ? 1.339 ? ? covale8 covale both ? A D4P 6 C ? ? ? 1_555 A GHP 7 N ? ? A D4P 6 A GHP 7 1_555 ? ? ? ? ? ? ? 1.351 ? ? covale9 covale both ? A GHP 7 C ? ? ? 1_555 A ALO 8 N ? ? A GHP 7 A ALO 8 1_555 ? ? ? ? ? ? ? 1.344 ? ? covale10 covale both ? A ALO 8 C ? ? ? 1_555 A PHE 9 N ? ? A ALO 8 A PHE 9 1_555 ? ? ? ? ? ? ? 1.340 ? ? covale11 covale both ? A PHE 9 C ? ? ? 1_555 A ORD 10 N ? ? A PHE 9 A ORD 10 1_555 ? ? ? ? ? ? ? 1.343 ? ? covale12 covale both ? A ORD 10 C ? ? ? 1_555 A D4P 11 N ? ? A ORD 10 A D4P 11 1_555 ? ? ? ? ? ? ? 1.342 ? ? covale13 covale both ? A D4P 11 C ? ? ? 1_555 A 2TL 12 N ? ? A D4P 11 A 2TL 12 1_555 ? ? ? ? ? ? ? 1.343 ? ? covale14 covale both ? A D4P 11 O4 ? ? ? 1_555 B MAN . C1 ? ? A D4P 11 B MAN 1 1_555 ? ? ? ? ? ? ? 1.451 ? ? covale15 covale both ? A 2TL 12 C ? ? ? 1_555 A D4P 13 N ? ? A 2TL 12 A D4P 13 1_555 ? ? ? ? ? ? ? 1.341 ? ? covale16 covale both ? A D4P 13 C ? ? ? 1_555 A GLY 14 N ? ? A D4P 13 A GLY 14 1_555 ? ? ? ? ? ? ? 1.349 ? ? covale17 covale both ? A LEU 15 C ? ? ? 1_555 A DAL 16 N ? ? A LEU 15 A DAL 16 1_555 ? ? ? ? ? ? ? 1.338 ? ? covale18 covale both ? A DAL 16 C ? ? ? 1_555 A CHP 17 N ? ? A DAL 16 A CHP 17 1_555 ? ? ? ? ? ? ? 1.346 ? ? covale19 covale both ? B MAN . O2 ? ? ? 1_555 B MAN . C1 ? ? B MAN 1 B MAN 2 1_555 ? ? ? ? ? ? ? 1.450 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id A _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GHP A 3 ? D4P A 6 ? GHP A 3 D4P A 6 A 2 D4P A 11 ? D4P A 13 ? D4P A 11 D4P A 13 # _pdbx_struct_sheet_hbond.sheet_id A _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id N _pdbx_struct_sheet_hbond.range_1_label_comp_id ORD _pdbx_struct_sheet_hbond.range_1_label_asym_id A _pdbx_struct_sheet_hbond.range_1_label_seq_id 4 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id N _pdbx_struct_sheet_hbond.range_1_auth_comp_id ORD _pdbx_struct_sheet_hbond.range_1_auth_asym_id A _pdbx_struct_sheet_hbond.range_1_auth_seq_id 4 _pdbx_struct_sheet_hbond.range_2_label_atom_id O _pdbx_struct_sheet_hbond.range_2_label_comp_id 2TL _pdbx_struct_sheet_hbond.range_2_label_asym_id A _pdbx_struct_sheet_hbond.range_2_label_seq_id 12 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id O _pdbx_struct_sheet_hbond.range_2_auth_comp_id 2TL _pdbx_struct_sheet_hbond.range_2_auth_asym_id A _pdbx_struct_sheet_hbond.range_2_auth_seq_id 12 # _database_PDB_matrix.entry_id 1DSR _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1DSR _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL H N O # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASN 1 1 1 ASN ASN A . n A 1 2 AHB 2 2 2 AHB AHB A . n A 1 3 GHP 3 3 3 GHP GHP A . n A 1 4 ORD 4 4 4 ORD ORD A . n A 1 5 2TL 5 5 5 2TL 2TL A . n A 1 6 D4P 6 6 6 D4P D4P A . n A 1 7 GHP 7 7 7 GHP GHP A . n A 1 8 ALO 8 8 8 ALO ALO A . n A 1 9 PHE 9 9 9 PHE PHE A . n A 1 10 ORD 10 10 10 ORD ORD A . n A 1 11 D4P 11 11 11 D4P D4P A . n A 1 12 2TL 12 12 12 2TL 2TL A . n A 1 13 D4P 13 13 13 D4P D4P A . n A 1 14 GLY 14 14 14 GLY GLY A . n A 1 15 LEU 15 15 15 LEU LEU A . n A 1 16 DAL 16 16 16 DAL DAL A . n A 1 17 CHP 17 17 17 CHP CHP A . n # _pdbx_nonpoly_scheme.asym_id C _pdbx_nonpoly_scheme.entity_id 3 _pdbx_nonpoly_scheme.mon_id FA7 _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 0 _pdbx_nonpoly_scheme.auth_seq_num 0 _pdbx_nonpoly_scheme.pdb_mon_id FA7 _pdbx_nonpoly_scheme.auth_mon_id FA7 _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _pdbx_molecule_features.prd_id _pdbx_molecule_features.name _pdbx_molecule_features.type _pdbx_molecule_features.class _pdbx_molecule_features.details PRD_000222 'RAMOPLANIN A2' Lipoglycopeptide Antibiotic ;RAMOPLANIN A2 IS A CYCLIC HEPTADECAMER LIPOGLYCODEPSIPEPTIDE. THE SCAFFOLD IS A HEPTA CYCLIC PEPTIDE GLYCOSYLATED BY ONE DISACCHARIDE AND A FATTY ACID AT THE N-TERM. ; PRD_900111 2alpha-alpha-mannobiose Oligosaccharide Metabolism oligosaccharide # loop_ _pdbx_molecule.instance_id _pdbx_molecule.prd_id _pdbx_molecule.asym_id 1 PRD_000222 A 1 PRD_000222 B 1 PRD_000222 C # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1997-02-12 2 'Structure model' 1 1 2011-06-14 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2011-07-27 5 'Structure model' 1 4 2012-12-12 6 'Structure model' 2 0 2020-07-29 7 'Structure model' 3 0 2023-11-15 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 6 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Atomic model' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Non-polymer description' 7 4 'Structure model' 'Structure summary' 8 5 'Structure model' Other 9 6 'Structure model' 'Atomic model' 10 6 'Structure model' 'Data collection' 11 6 'Structure model' 'Derived calculations' 12 6 'Structure model' Other 13 6 'Structure model' 'Structure summary' 14 7 'Structure model' 'Atomic model' 15 7 'Structure model' 'Data collection' 16 7 'Structure model' 'Database references' 17 7 'Structure model' 'Derived calculations' 18 7 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 6 'Structure model' atom_site 2 6 'Structure model' chem_comp 3 6 'Structure model' entity 4 6 'Structure model' entity_name_com 5 6 'Structure model' pdbx_branch_scheme 6 6 'Structure model' pdbx_chem_comp_identifier 7 6 'Structure model' pdbx_database_status 8 6 'Structure model' pdbx_entity_branch 9 6 'Structure model' pdbx_entity_branch_descriptor 10 6 'Structure model' pdbx_entity_branch_link 11 6 'Structure model' pdbx_entity_branch_list 12 6 'Structure model' pdbx_entity_nonpoly 13 6 'Structure model' pdbx_molecule 14 6 'Structure model' pdbx_molecule_features 15 6 'Structure model' pdbx_nonpoly_scheme 16 6 'Structure model' pdbx_struct_assembly_gen 17 6 'Structure model' struct_asym 18 6 'Structure model' struct_conn 19 7 'Structure model' atom_site 20 7 'Structure model' chem_comp 21 7 'Structure model' chem_comp_atom 22 7 'Structure model' chem_comp_bond 23 7 'Structure model' database_2 24 7 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 6 'Structure model' '_atom_site.Cartn_x' 2 6 'Structure model' '_atom_site.Cartn_y' 3 6 'Structure model' '_atom_site.Cartn_z' 4 6 'Structure model' '_atom_site.auth_asym_id' 5 6 'Structure model' '_atom_site.auth_atom_id' 6 6 'Structure model' '_atom_site.auth_comp_id' 7 6 'Structure model' '_atom_site.auth_seq_id' 8 6 'Structure model' '_atom_site.label_asym_id' 9 6 'Structure model' '_atom_site.label_atom_id' 10 6 'Structure model' '_atom_site.label_comp_id' 11 6 'Structure model' '_atom_site.label_entity_id' 12 6 'Structure model' '_atom_site.type_symbol' 13 6 'Structure model' '_chem_comp.name' 14 6 'Structure model' '_chem_comp.type' 15 6 'Structure model' '_entity.formula_weight' 16 6 'Structure model' '_entity.pdbx_description' 17 6 'Structure model' '_entity.pdbx_number_of_molecules' 18 6 'Structure model' '_entity.src_method' 19 6 'Structure model' '_entity.type' 20 6 'Structure model' '_pdbx_database_status.process_site' 21 6 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 22 6 'Structure model' '_struct_conn.pdbx_dist_value' 23 6 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 24 6 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 25 6 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 26 6 'Structure model' '_struct_conn.ptnr1_label_asym_id' 27 6 'Structure model' '_struct_conn.ptnr1_label_atom_id' 28 6 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 29 6 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 30 6 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 31 6 'Structure model' '_struct_conn.ptnr2_label_asym_id' 32 6 'Structure model' '_struct_conn.ptnr2_label_atom_id' 33 6 'Structure model' '_struct_conn.ptnr2_label_comp_id' 34 6 'Structure model' '_struct_conn.ptnr2_label_seq_id' 35 7 'Structure model' '_atom_site.Cartn_x' 36 7 'Structure model' '_atom_site.Cartn_y' 37 7 'Structure model' '_atom_site.Cartn_z' 38 7 'Structure model' '_atom_site.auth_atom_id' 39 7 'Structure model' '_atom_site.label_atom_id' 40 7 'Structure model' '_chem_comp.pdbx_synonyms' 41 7 'Structure model' '_database_2.pdbx_DOI' 42 7 'Structure model' '_database_2.pdbx_database_accession' 43 7 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' # _pdbx_entry_details.entry_id 1DSR _pdbx_entry_details.compound_details ;RAMOPLANIN IS A CYCLIC LIPOGLYCOPEPTIDE. HERE, RAMOPLANIN IS REPRESENTED BY GROUPING TOGETHER THE SEQUENCE (SEQRES) A FATTY ACID (FA7) AND TWO LIGANDS (HET) MAN. ; _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 H2 A ASN 1 ? ? C2 A FA7 0 ? ? 1.09 2 2 H2 A ASN 1 ? ? C2 A FA7 0 ? ? 1.09 3 3 H2 A ASN 1 ? ? C2 A FA7 0 ? ? 1.09 4 4 H2 A ASN 1 ? ? C2 A FA7 0 ? ? 1.09 5 5 H2 A ASN 1 ? ? C2 A FA7 0 ? ? 1.09 6 6 H2 A ASN 1 ? ? C2 A FA7 0 ? ? 1.09 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GHP A 7 ? ? 171.82 -137.60 2 1 LEU A 15 ? ? 59.46 79.39 3 2 GHP A 7 ? ? 176.66 -127.71 4 2 LEU A 15 ? ? 62.31 79.46 5 3 LEU A 15 ? ? 60.29 80.34 6 4 GHP A 7 ? ? 174.95 -136.61 7 4 LEU A 15 ? ? 62.18 80.09 8 5 GHP A 7 ? ? 172.37 -131.17 9 5 LEU A 15 ? ? 61.49 80.39 10 6 GHP A 7 ? ? 179.97 -134.23 11 6 LEU A 15 ? ? 60.62 79.99 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 3 _pdbx_validate_peptide_omega.auth_comp_id_1 D4P _pdbx_validate_peptide_omega.auth_asym_id_1 A _pdbx_validate_peptide_omega.auth_seq_id_1 6 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 GHP _pdbx_validate_peptide_omega.auth_asym_id_2 A _pdbx_validate_peptide_omega.auth_seq_id_2 7 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega 148.22 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 2TL N N N N 1 2TL CA C N R 2 2TL CB C N R 3 2TL OG1 O N N 4 2TL CG2 C N N 5 2TL C C N N 6 2TL O O N N 7 2TL OXT O N N 8 2TL H H N N 9 2TL H2 H N N 10 2TL HA H N N 11 2TL HB H N N 12 2TL HG1 H N N 13 2TL HG21 H N N 14 2TL HG22 H N N 15 2TL HG23 H N N 16 2TL HXT H N N 17 AHB N N N N 18 AHB CA C N S 19 AHB CB C N S 20 AHB OB O N N 21 AHB CG C N N 22 AHB OD1 O N N 23 AHB ND2 N N N 24 AHB C C N N 25 AHB O O N N 26 AHB OXT O N N 27 AHB H H N N 28 AHB H2 H N N 29 AHB HA H N N 30 AHB HB H N N 31 AHB HOB H N N 32 AHB HD21 H N N 33 AHB HD22 H N N 34 AHB HXT H N N 35 ALO N N N N 36 ALO CA C N S 37 ALO CB C N S 38 ALO CG2 C N N 39 ALO OG1 O N N 40 ALO C C N N 41 ALO O O N N 42 ALO OXT O N N 43 ALO H H N N 44 ALO H2 H N N 45 ALO HA H N N 46 ALO HB H N N 47 ALO HG21 H N N 48 ALO HG22 H N N 49 ALO HG23 H N N 50 ALO HG1 H N N 51 ALO HXT H N N 52 ASN N N N N 53 ASN CA C N S 54 ASN C C N N 55 ASN O O N N 56 ASN CB C N N 57 ASN CG C N N 58 ASN OD1 O N N 59 ASN ND2 N N N 60 ASN OXT O N N 61 ASN H H N N 62 ASN H2 H N N 63 ASN HA H N N 64 ASN HB2 H N N 65 ASN HB3 H N N 66 ASN HD21 H N N 67 ASN HD22 H N N 68 ASN HXT H N N 69 CHP N N N N 70 CHP CA C N S 71 CHP C C N N 72 CHP O O N N 73 CHP OXT O N N 74 CHP C1 C Y N 75 CHP C2 C Y N 76 CHP C3 C Y N 77 CHP CL3 CL N N 78 CHP C4 C Y N 79 CHP O4 O N N 80 CHP C5 C Y N 81 CHP C6 C Y N 82 CHP H H N N 83 CHP H2 H N N 84 CHP HA H N N 85 CHP HXT H N N 86 CHP HC2 H N N 87 CHP HO4 H N N 88 CHP H5 H N N 89 CHP H6 H N N 90 D4P N N N N 91 D4P CA C N S 92 D4P C C N N 93 D4P O O N N 94 D4P C1 C Y N 95 D4P C2 C Y N 96 D4P C3 C Y N 97 D4P C4 C Y N 98 D4P O4 O N N 99 D4P C5 C Y N 100 D4P C6 C Y N 101 D4P OXT O N N 102 D4P H H N N 103 D4P H2 H N N 104 D4P HA H N N 105 D4P H1 H N N 106 D4P H3 H N N 107 D4P H4 H N N 108 D4P H5 H N N 109 D4P H6 H N N 110 D4P HXT H N N 111 DAL N N N N 112 DAL CA C N R 113 DAL CB C N N 114 DAL C C N N 115 DAL O O N N 116 DAL OXT O N N 117 DAL H H N N 118 DAL H2 H N N 119 DAL HA H N N 120 DAL HB1 H N N 121 DAL HB2 H N N 122 DAL HB3 H N N 123 DAL HXT H N N 124 FA7 C1 C N N 125 FA7 O O N N 126 FA7 C2 C N N 127 FA7 C3 C N N 128 FA7 C4 C N N 129 FA7 C5 C N N 130 FA7 C6 C N N 131 FA7 C7 C N N 132 FA7 C8 C N N 133 FA7 C9 C N N 134 FA7 OXT O N N 135 FA7 H2 H N N 136 FA7 H3 H N N 137 FA7 H4 H N N 138 FA7 H5 H N N 139 FA7 H61 H N N 140 FA7 H62 H N N 141 FA7 H7 H N N 142 FA7 H81 H N N 143 FA7 H82 H N N 144 FA7 H83 H N N 145 FA7 H91 H N N 146 FA7 H92 H N N 147 FA7 H93 H N N 148 FA7 HXT H N N 149 GHP N N N N 150 GHP CA C N R 151 GHP C C N N 152 GHP O O N N 153 GHP OXT O N N 154 GHP C1 C Y N 155 GHP C2 C Y N 156 GHP C3 C Y N 157 GHP C4 C Y N 158 GHP O4 O N N 159 GHP C5 C Y N 160 GHP C6 C Y N 161 GHP H H N N 162 GHP H2 H N N 163 GHP HA H N N 164 GHP HXT H N N 165 GHP HC2 H N N 166 GHP H3 H N N 167 GHP HO4 H N N 168 GHP H5 H N N 169 GHP H6 H N N 170 GLY N N N N 171 GLY CA C N N 172 GLY C C N N 173 GLY O O N N 174 GLY OXT O N N 175 GLY H H N N 176 GLY H2 H N N 177 GLY HA2 H N N 178 GLY HA3 H N N 179 GLY HXT H N N 180 LEU N N N N 181 LEU CA C N S 182 LEU C C N N 183 LEU O O N N 184 LEU CB C N N 185 LEU CG C N N 186 LEU CD1 C N N 187 LEU CD2 C N N 188 LEU OXT O N N 189 LEU H H N N 190 LEU H2 H N N 191 LEU HA H N N 192 LEU HB2 H N N 193 LEU HB3 H N N 194 LEU HG H N N 195 LEU HD11 H N N 196 LEU HD12 H N N 197 LEU HD13 H N N 198 LEU HD21 H N N 199 LEU HD22 H N N 200 LEU HD23 H N N 201 LEU HXT H N N 202 MAN C1 C N S 203 MAN C2 C N S 204 MAN C3 C N S 205 MAN C4 C N S 206 MAN C5 C N R 207 MAN C6 C N N 208 MAN O1 O N N 209 MAN O2 O N N 210 MAN O3 O N N 211 MAN O4 O N N 212 MAN O5 O N N 213 MAN O6 O N N 214 MAN H1 H N N 215 MAN H2 H N N 216 MAN H3 H N N 217 MAN H4 H N N 218 MAN H5 H N N 219 MAN H61 H N N 220 MAN H62 H N N 221 MAN HO1 H N N 222 MAN HO2 H N N 223 MAN HO3 H N N 224 MAN HO4 H N N 225 MAN HO6 H N N 226 ORD N N N N 227 ORD CA C N R 228 ORD CB C N N 229 ORD CG C N N 230 ORD CD C N N 231 ORD NE N N N 232 ORD O O N N 233 ORD OXT O N N 234 ORD C C N N 235 ORD H H N N 236 ORD H2 H N N 237 ORD HA H N N 238 ORD HB2 H N N 239 ORD HB3 H N N 240 ORD HG2 H N N 241 ORD HG3 H N N 242 ORD HD2 H N N 243 ORD HD3 H N N 244 ORD HE1 H N N 245 ORD HE2 H N N 246 ORD HXT H N N 247 PHE N N N N 248 PHE CA C N S 249 PHE C C N N 250 PHE O O N N 251 PHE CB C N N 252 PHE CG C Y N 253 PHE CD1 C Y N 254 PHE CD2 C Y N 255 PHE CE1 C Y N 256 PHE CE2 C Y N 257 PHE CZ C Y N 258 PHE OXT O N N 259 PHE H H N N 260 PHE H2 H N N 261 PHE HA H N N 262 PHE HB2 H N N 263 PHE HB3 H N N 264 PHE HD1 H N N 265 PHE HD2 H N N 266 PHE HE1 H N N 267 PHE HE2 H N N 268 PHE HZ H N N 269 PHE HXT H N N 270 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 2TL N CA sing N N 1 2TL CA CB sing N N 2 2TL CA C sing N N 3 2TL CB OG1 sing N N 4 2TL CB CG2 sing N N 5 2TL C O doub N N 6 2TL C OXT sing N N 7 2TL N H sing N N 8 2TL N H2 sing N N 9 2TL CA HA sing N N 10 2TL CB HB sing N N 11 2TL OG1 HG1 sing N N 12 2TL CG2 HG21 sing N N 13 2TL CG2 HG22 sing N N 14 2TL CG2 HG23 sing N N 15 2TL OXT HXT sing N N 16 AHB N CA sing N N 17 AHB N H sing N N 18 AHB N H2 sing N N 19 AHB CA CB sing N N 20 AHB CA C sing N N 21 AHB CA HA sing N N 22 AHB CB OB sing N N 23 AHB CB CG sing N N 24 AHB CB HB sing N N 25 AHB OB HOB sing N N 26 AHB CG OD1 doub N N 27 AHB CG ND2 sing N N 28 AHB ND2 HD21 sing N N 29 AHB ND2 HD22 sing N N 30 AHB C O doub N N 31 AHB C OXT sing N N 32 AHB OXT HXT sing N N 33 ALO N CA sing N N 34 ALO N H sing N N 35 ALO N H2 sing N N 36 ALO CA CB sing N N 37 ALO CA C sing N N 38 ALO CA HA sing N N 39 ALO CB CG2 sing N N 40 ALO CB OG1 sing N N 41 ALO CB HB sing N N 42 ALO CG2 HG21 sing N N 43 ALO CG2 HG22 sing N N 44 ALO CG2 HG23 sing N N 45 ALO OG1 HG1 sing N N 46 ALO C O doub N N 47 ALO C OXT sing N N 48 ALO OXT HXT sing N N 49 ASN N CA sing N N 50 ASN N H sing N N 51 ASN N H2 sing N N 52 ASN CA C sing N N 53 ASN CA CB sing N N 54 ASN CA HA sing N N 55 ASN C O doub N N 56 ASN C OXT sing N N 57 ASN CB CG sing N N 58 ASN CB HB2 sing N N 59 ASN CB HB3 sing N N 60 ASN CG OD1 doub N N 61 ASN CG ND2 sing N N 62 ASN ND2 HD21 sing N N 63 ASN ND2 HD22 sing N N 64 ASN OXT HXT sing N N 65 CHP N CA sing N N 66 CHP N H sing N N 67 CHP N H2 sing N N 68 CHP CA C sing N N 69 CHP CA C1 sing N N 70 CHP CA HA sing N N 71 CHP C O doub N N 72 CHP C OXT sing N N 73 CHP OXT HXT sing N N 74 CHP C1 C2 doub Y N 75 CHP C1 C6 sing Y N 76 CHP C2 C3 sing Y N 77 CHP C2 HC2 sing N N 78 CHP C3 CL3 sing N N 79 CHP C3 C4 doub Y N 80 CHP C4 O4 sing N N 81 CHP C4 C5 sing Y N 82 CHP O4 HO4 sing N N 83 CHP C5 C6 doub Y N 84 CHP C5 H5 sing N N 85 CHP C6 H6 sing N N 86 D4P N CA sing N N 87 D4P N H sing N N 88 D4P N H2 sing N N 89 D4P CA C sing N N 90 D4P CA C1 sing N N 91 D4P CA HA sing N N 92 D4P C O doub N N 93 D4P C OXT sing N N 94 D4P C1 C2 doub Y N 95 D4P C1 C6 sing Y N 96 D4P C2 C3 sing Y N 97 D4P C2 H1 sing N N 98 D4P C3 C4 doub Y N 99 D4P C3 H3 sing N N 100 D4P C4 O4 sing N N 101 D4P C4 C5 sing Y N 102 D4P O4 H4 sing N N 103 D4P C5 C6 doub Y N 104 D4P C5 H5 sing N N 105 D4P C6 H6 sing N N 106 D4P OXT HXT sing N N 107 DAL N CA sing N N 108 DAL N H sing N N 109 DAL N H2 sing N N 110 DAL CA CB sing N N 111 DAL CA C sing N N 112 DAL CA HA sing N N 113 DAL CB HB1 sing N N 114 DAL CB HB2 sing N N 115 DAL CB HB3 sing N N 116 DAL C O doub N N 117 DAL C OXT sing N N 118 DAL OXT HXT sing N N 119 FA7 C1 O doub N N 120 FA7 C1 C2 sing N N 121 FA7 C1 OXT sing N N 122 FA7 C2 C3 doub N Z 123 FA7 C3 C4 sing N N 124 FA7 C4 C5 doub N N 125 FA7 C5 C6 sing N N 126 FA7 C6 C7 sing N E 127 FA7 C7 C8 sing N N 128 FA7 C7 C9 sing N N 129 FA7 C2 H2 sing N N 130 FA7 C3 H3 sing N N 131 FA7 C4 H4 sing N N 132 FA7 C5 H5 sing N N 133 FA7 C6 H61 sing N N 134 FA7 C6 H62 sing N N 135 FA7 C7 H7 sing N N 136 FA7 C8 H81 sing N N 137 FA7 C8 H82 sing N N 138 FA7 C8 H83 sing N N 139 FA7 C9 H91 sing N N 140 FA7 C9 H92 sing N N 141 FA7 C9 H93 sing N N 142 FA7 OXT HXT sing N N 143 GHP N CA sing N N 144 GHP N H sing N N 145 GHP N H2 sing N N 146 GHP CA C sing N N 147 GHP CA C1 sing N N 148 GHP CA HA sing N N 149 GHP C O doub N N 150 GHP C OXT sing N N 151 GHP OXT HXT sing N N 152 GHP C1 C2 doub Y N 153 GHP C1 C6 sing Y N 154 GHP C2 C3 sing Y N 155 GHP C2 HC2 sing N N 156 GHP C3 C4 doub Y N 157 GHP C3 H3 sing N N 158 GHP C4 O4 sing N N 159 GHP C4 C5 sing Y N 160 GHP O4 HO4 sing N N 161 GHP C5 C6 doub Y N 162 GHP C5 H5 sing N N 163 GHP C6 H6 sing N N 164 GLY N CA sing N N 165 GLY N H sing N N 166 GLY N H2 sing N N 167 GLY CA C sing N N 168 GLY CA HA2 sing N N 169 GLY CA HA3 sing N N 170 GLY C O doub N N 171 GLY C OXT sing N N 172 GLY OXT HXT sing N N 173 LEU N CA sing N N 174 LEU N H sing N N 175 LEU N H2 sing N N 176 LEU CA C sing N N 177 LEU CA CB sing N N 178 LEU CA HA sing N N 179 LEU C O doub N N 180 LEU C OXT sing N N 181 LEU CB CG sing N N 182 LEU CB HB2 sing N N 183 LEU CB HB3 sing N N 184 LEU CG CD1 sing N N 185 LEU CG CD2 sing N N 186 LEU CG HG sing N N 187 LEU CD1 HD11 sing N N 188 LEU CD1 HD12 sing N N 189 LEU CD1 HD13 sing N N 190 LEU CD2 HD21 sing N N 191 LEU CD2 HD22 sing N N 192 LEU CD2 HD23 sing N N 193 LEU OXT HXT sing N N 194 MAN C1 C2 sing N N 195 MAN C1 O1 sing N N 196 MAN C1 O5 sing N N 197 MAN C1 H1 sing N N 198 MAN C2 C3 sing N N 199 MAN C2 O2 sing N N 200 MAN C2 H2 sing N N 201 MAN C3 C4 sing N N 202 MAN C3 O3 sing N N 203 MAN C3 H3 sing N N 204 MAN C4 C5 sing N N 205 MAN C4 O4 sing N N 206 MAN C4 H4 sing N N 207 MAN C5 C6 sing N N 208 MAN C5 O5 sing N N 209 MAN C5 H5 sing N N 210 MAN C6 O6 sing N N 211 MAN C6 H61 sing N N 212 MAN C6 H62 sing N N 213 MAN O1 HO1 sing N N 214 MAN O2 HO2 sing N N 215 MAN O3 HO3 sing N N 216 MAN O4 HO4 sing N N 217 MAN O6 HO6 sing N N 218 ORD N CA sing N N 219 ORD CA CB sing N N 220 ORD CA C sing N N 221 ORD CB CG sing N N 222 ORD CG CD sing N N 223 ORD CD NE sing N N 224 ORD C O doub N N 225 ORD C OXT sing N N 226 ORD N H sing N N 227 ORD N H2 sing N N 228 ORD CA HA sing N N 229 ORD CB HB2 sing N N 230 ORD CB HB3 sing N N 231 ORD CG HG2 sing N N 232 ORD CG HG3 sing N N 233 ORD CD HD2 sing N N 234 ORD CD HD3 sing N N 235 ORD NE HE1 sing N N 236 ORD NE HE2 sing N N 237 ORD OXT HXT sing N N 238 PHE N CA sing N N 239 PHE N H sing N N 240 PHE N H2 sing N N 241 PHE CA C sing N N 242 PHE CA CB sing N N 243 PHE CA HA sing N N 244 PHE C O doub N N 245 PHE C OXT sing N N 246 PHE CB CG sing N N 247 PHE CB HB2 sing N N 248 PHE CB HB3 sing N N 249 PHE CG CD1 doub Y N 250 PHE CG CD2 sing Y N 251 PHE CD1 CE1 sing Y N 252 PHE CD1 HD1 sing N N 253 PHE CD2 CE2 doub Y N 254 PHE CD2 HD2 sing N N 255 PHE CE1 CZ doub Y N 256 PHE CE1 HE1 sing N N 257 PHE CE2 CZ sing Y N 258 PHE CE2 HE2 sing N N 259 PHE CZ HZ sing N N 260 PHE OXT HXT sing N N 261 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero B 2 MAN 1 B MAN 1 A MAN 18 n B 2 MAN 2 B MAN 2 A MAN 19 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier MAN 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpa MAN 'COMMON NAME' GMML 1.0 a-D-mannopyranose MAN 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Manp MAN 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 DManpa1-2DManpa1-ROH 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/1,2,1/[a1122h-1a_1-5]/1-1/a2-b1' WURCS PDB2Glycan 1.1.0 3 2 '[][D-1-deoxy-Manp]{[(2+1)][a-D-Manp]{}}' LINUCS PDB-CARE ? # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.comp_id_1 MAN _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_2 MAN _pdbx_entity_branch_link.atom_id_2 O2 _pdbx_entity_branch_link.leaving_atom_id_2 HO2 _pdbx_entity_branch_link.value_order sing _pdbx_entity_branch_link.details ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 MAN 1 n 2 MAN 2 n # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name '(2Z,4E)-7-methylocta-2,4-dienoic acid' _pdbx_entity_nonpoly.comp_id FA7 #