HEADER OXIDOREDUCTASE 10-JAN-00 1DXL TITLE DIHYDROLIPOAMIDE DEHYDROGENASE OF GLYCINE DECARBOXYLASE FROM PISUM TITLE 2 SATIVUM COMPND MOL_ID: 1; COMPND 2 MOLECULE: DIHYDROLIPOAMIDE DEHYDROGENASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: LIPOAMIDE DEHYDROGENASE, L PROTEIN, E3, DLDH, GLYCINE COMPND 5 CLEAVAGE SYSTEM L PROTEIN; COMPND 6 EC: 1.8.1.4; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PISUM SATIVUM; SOURCE 3 ORGANISM_COMMON: PEA; SOURCE 4 ORGANISM_TAXID: 3888; SOURCE 5 TISSUE: LEAF; SOURCE 6 ORGANELLE: MITOCHONDRIA; SOURCE 7 CELLULAR_LOCATION: MITOCHONDRIA; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 10 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 11 EXPRESSION_SYSTEM_CELLULAR_LOCATION: INCLUSION BODIES; SOURCE 12 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 13 EXPRESSION_SYSTEM_PLASMID: PET3A KEYWDS OXIDOREDUCTASE, DIHYDROLIPOAMIDE DEHYDROGENASE, MULTIENZYME COMPLEX KEYWDS 2 PROTEIN, PYRUVATE DEHYDROGENASE COMPLEX, GLYCINE DECARBOXYLASE KEYWDS 3 COMPLEX, FLAVOPROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.FAURE,C.COHEN-ADDAD,J.BOURGUIGNON,D.MACHEREL,M.NEUBURGER,R.DOUCE REVDAT 5 06-NOV-24 1DXL 1 REMARK REVDAT 4 06-DEC-23 1DXL 1 REMARK REVDAT 3 19-FEB-14 1DXL 1 SOURCE REMARK VERSN HETSYN REVDAT 3 2 1 FORMUL REVDAT 2 24-FEB-09 1DXL 1 VERSN REVDAT 1 20-JUL-00 1DXL 0 JRNL AUTH M.FAURE,J.BOURGUIGNON,M.NEUBURGER,D.MACHEREL,L.SIEKER, JRNL AUTH 2 R.OBER,R.KAHN,C.COHEN-ADDAD,R.DOUCE JRNL TITL INTERACTION BETWEEN THE LIPOAMIDE-CONTAINING H-PROTEIN AND JRNL TITL 2 THE LIPOAMIDE DEHYDROGENASE (L-PROTEIN) OF THE GLYCINE JRNL TITL 3 DECARBOXYLASE MULTIENZYME SYSTEM. 2. CRYSTAL STRUCTURE OF H- JRNL TITL 4 AND L-PROTEINS JRNL REF EUR.J.BIOCHEM. V. 267 2890 2000 JRNL REFN ISSN 0014-2956 JRNL PMID 10806386 JRNL DOI 10.1046/J.1432-1033.2000.01330.X REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH J.BOURGUIGNON,V.MERAND,S.RAWSTHORNE,E.FOREST,R.DOUCE REMARK 1 TITL GLYCINE DECARBOXYLASE AND PYRUVATE DEHYDROGENASE COMPLEXES REMARK 1 TITL 2 SHARE THE SAME DIHYDROLIPOAMIDE DEHYDROGENASE IN PEA LEAF REMARK 1 TITL 3 MITOCHONDRIA: EVIDENCE FROM MASS SPECTROMETRY AND REMARK 1 TITL 4 PRIMARY-STRUCTURE ANALYSIS REMARK 1 REF BIOCHEM.J. V. 313 229 1996 REMARK 1 REFN ISSN 0264-6021 REMARK 1 PMID 8546688 REMARK 2 REMARK 2 RESOLUTION. 3.15 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 0.4 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.15 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 15.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 1953239.040 REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 86.1 REMARK 3 NUMBER OF REFLECTIONS : 33219 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.226 REMARK 3 FREE R VALUE : 0.323 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1650 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.008 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.15 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.35 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 76.70 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 4630 REMARK 3 BIN R VALUE (WORKING SET) : 0.3760 REMARK 3 BIN FREE R VALUE : 0.5140 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.70 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 228 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.034 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 13900 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 212 REMARK 3 SOLVENT ATOMS : 104 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 87.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 75.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 4.63000 REMARK 3 B22 (A**2) : -11.76000 REMARK 3 B33 (A**2) : 7.13000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.41 REMARK 3 ESD FROM SIGMAA (A) : 0.56 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.60 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.94 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.019 REMARK 3 BOND ANGLES (DEGREES) : 2.100 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 23.50 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.200 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.23 REMARK 3 BSOL : 54.00 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : FAD.PAR REMARK 3 PARAMETER FILE 3 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 4 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : FAD.TOP REMARK 3 TOPOLOGY FILE 3 : WATER.TOP REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: BULK SOLVENT MODEL USED. DISORDERED REMARK 3 REGIONS WERE MODELED STEREOCHEMICALLY REMARK 4 REMARK 4 1DXL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 10-JAN-00. REMARK 100 THE DEPOSITION ID IS D_1290001995. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-FEB-98 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 5.00 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-3 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9475 REMARK 200 MONOCHROMATOR : DIAMOND C(111) REMARK 200 OPTICS : MULTILAYER MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33527 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.150 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 87.0 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06300 REMARK 200 FOR THE DATA SET : 8.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.15 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.32 REMARK 200 COMPLETENESS FOR SHELL (%) : 77.3 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.25400 REMARK 200 FOR SHELL : 3.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS 0.4 REMARK 200 STARTING MODEL: PDB ENTRY 3LAD REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.76 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 15 % PEG MME 5K, 100 MM MES PH 5, 0.45 REMARK 280 % HEPTYL-B-D-THIOGLUCOPYRANOSIDE, 2MM POTASSIUM LIPOATE., PH 5.00 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 50.28000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 101.09500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 54.16500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 101.09500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 50.28000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 54.16500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: BIOLOGICAL_UNIT: HOMODIMERTHE ASYMETRIC UNIT REMARK 300 CONTAINS 2 DIMERS (AB AND CD) REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 TOTAL BURIED SURFACE AREA: 8320 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 44680 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -51.6 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 TOTAL BURIED SURFACE AREA: 8010 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 45210 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -51.3 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 1 REMARK 465 SER A 2 REMARK 465 GLY A 3 REMARK 465 ALA B 1 REMARK 465 SER B 2 REMARK 465 GLY B 3 REMARK 465 ALA C 1 REMARK 465 SER C 2 REMARK 465 GLY C 3 REMARK 465 ALA D 1 REMARK 465 SER D 2 REMARK 465 GLY D 3 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 LYS A 76 CG CD CE NZ REMARK 480 ASN A 79 CG OD1 ND2 REMARK 480 LYS A 107 CG CD CE NZ REMARK 480 GLU A 125 CG CD OE1 OE2 REMARK 480 GLU A 132 CG CD OE1 OE2 REMARK 480 LYS A 162 CG CD CE NZ REMARK 480 LYS A 238 CG CD CE NZ REMARK 480 ASP A 245 CG OD1 OD2 REMARK 480 GLU A 267 CG CD OE1 OE2 REMARK 480 LYS A 295 CG CD CE NZ REMARK 480 ARG A 379 CG CD NE CZ NH1 NH2 REMARK 480 LYS A 466 CG CD CE NZ REMARK 480 GLU B 6 CG CD OE1 OE2 REMARK 480 ASN B 79 CG OD1 ND2 REMARK 480 GLU B 125 CG CD OE1 OE2 REMARK 480 LYS B 139 CG CD CE NZ REMARK 480 LYS B 141 CG CD CE NZ REMARK 480 LYS B 163 CG CD CE NZ REMARK 480 LYS B 240 CG CD CE NZ REMARK 480 GLU B 256 CG CD OE1 OE2 REMARK 480 GLU B 267 CG CD OE1 OE2 REMARK 480 GLU B 292 CG CD OE1 OE2 REMARK 480 ASP B 294 CG OD1 OD2 REMARK 480 GLU B 377 CG CD OE1 OE2 REMARK 480 LYS B 466 CG CD CE NZ REMARK 480 LYS C 76 CG CD CE NZ REMARK 480 ASN C 79 CG OD1 ND2 REMARK 480 LYS C 119 CG CD CE NZ REMARK 480 GLU C 125 CG CD OE1 OE2 REMARK 480 ASP C 129 CG OD1 OD2 REMARK 480 GLU C 134 CG CD OE1 OE2 REMARK 480 ASP C 160 CG OD1 OD2 REMARK 480 LYS C 162 CG CD CE NZ REMARK 480 LYS C 163 CG CD CE NZ REMARK 480 GLU C 202 CG CD OE1 OE2 REMARK 480 LYS C 238 CG CD CE NZ REMARK 480 LYS C 240 CG CD CE NZ REMARK 480 ASP C 245 CG OD1 OD2 REMARK 480 GLU C 256 CG CD OE1 OE2 REMARK 480 ASP C 269 CG OD1 OD2 REMARK 480 ASP C 287 CG OD1 OD2 REMARK 480 LYS C 288 CG CD CE NZ REMARK 480 GLU C 292 CG CD OE1 OE2 REMARK 480 ASP C 294 CG OD1 OD2 REMARK 480 LYS C 295 CG CD CE NZ REMARK 480 LYS C 466 CG CD CE NZ REMARK 480 ASN D 79 CG OD1 ND2 REMARK 480 GLU D 81 CG CD OE1 OE2 REMARK 480 LYS D 93 CG CD CE NZ REMARK 480 GLU D 125 CG CD OE1 OE2 REMARK 480 GLU D 134 CG CD OE1 OE2 REMARK 480 LYS D 139 CG CD CE NZ REMARK 480 ASP D 245 CG OD1 OD2 REMARK 480 GLU D 267 CG CD OE1 OE2 REMARK 480 LYS D 295 CG CD CE NZ REMARK 480 LYS D 466 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLY D 43 O HOH D 2001 1.95 REMARK 500 O ILE B 183 O VAL B 206 2.06 REMARK 500 O ARG C 198 O HOH C 2010 2.07 REMARK 500 O VAL C 251 O ALA C 268 2.08 REMARK 500 O ILE C 183 O VAL C 206 2.09 REMARK 500 N VAL A 251 O ALA A 268 2.13 REMARK 500 O VAL C 242 O THR C 254 2.15 REMARK 500 N VAL C 165 O VAL C 271 2.17 REMARK 500 OE2 GLU D 329 O HOH D 2011 2.17 REMARK 500 O ARG C 38 O HOH C 2004 2.17 REMARK 500 O GLU C 36 O HOH C 2004 2.19 REMARK 500 O ALA A 259 N GLY A 261 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLN C 263 C THR C 264 N -0.139 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 CYS A 45 CA - CB - SG ANGL. DEV. = 7.1 DEGREES REMARK 500 PRO A 155 C - N - CA ANGL. DEV. = 12.9 DEGREES REMARK 500 PRO A 359 C - N - CA ANGL. DEV. = -9.4 DEGREES REMARK 500 PRO A 384 C - N - CA ANGL. DEV. = 12.3 DEGREES REMARK 500 CYS B 50 CA - CB - SG ANGL. DEV. = 6.8 DEGREES REMARK 500 LYS B 162 N - CA - C ANGL. DEV. = 18.2 DEGREES REMARK 500 PRO B 352 C - N - CA ANGL. DEV. = 9.9 DEGREES REMARK 500 PRO B 359 C - N - CA ANGL. DEV. = -10.4 DEGREES REMARK 500 PRO B 467 C - N - CA ANGL. DEV. = 9.8 DEGREES REMARK 500 PRO C 359 C - N - CA ANGL. DEV. = -16.0 DEGREES REMARK 500 PRO D 384 C - N - CA ANGL. DEV. = 9.4 DEGREES REMARK 500 PRO D 467 C - N - CA ANGL. DEV. = 13.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 50 -92.04 -40.84 REMARK 500 PHE A 70 -37.13 -28.27 REMARK 500 ALA A 71 -75.97 -51.33 REMARK 500 ASN A 72 -16.78 -40.43 REMARK 500 GLU A 81 -165.07 -126.63 REMARK 500 ASN A 97 -60.10 -29.35 REMARK 500 LYS A 119 115.94 -161.55 REMARK 500 PRO A 123 -8.59 -57.96 REMARK 500 ASP A 129 -89.31 -38.83 REMARK 500 GLU A 132 2.02 -165.95 REMARK 500 GLU A 134 -147.11 -90.04 REMARK 500 ASN A 135 118.80 -165.82 REMARK 500 ALA A 146 29.16 -152.99 REMARK 500 PRO A 155 -47.60 -24.86 REMARK 500 ASP A 160 -88.57 -83.89 REMARK 500 GLU A 161 -3.98 163.66 REMARK 500 LYS A 162 -83.00 -89.55 REMARK 500 SER A 166 -160.73 -107.88 REMARK 500 GLU A 175 119.47 -169.82 REMARK 500 ALA A 185 52.61 -117.03 REMARK 500 VAL A 195 -77.59 -41.76 REMARK 500 SER A 201 169.30 -43.35 REMARK 500 VAL A 213 85.29 59.82 REMARK 500 LYS A 222 -76.17 -35.18 REMARK 500 LYS A 230 -37.77 -26.46 REMARK 500 MET A 233 159.57 170.13 REMARK 500 LYS A 238 44.58 36.70 REMARK 500 VAL A 242 -88.26 -48.22 REMARK 500 ASP A 249 -79.90 -61.32 REMARK 500 PRO A 257 171.68 -46.14 REMARK 500 SER A 258 35.27 -79.55 REMARK 500 ALA A 259 -99.77 178.68 REMARK 500 GLU A 262 79.99 -116.38 REMARK 500 GLN A 263 156.70 -39.99 REMARK 500 SER A 274 43.86 -105.35 REMARK 500 ALA A 275 -165.06 -61.21 REMARK 500 SER A 282 132.71 -29.74 REMARK 500 LYS A 288 -42.23 -26.18 REMARK 500 ASP A 294 -168.82 -105.28 REMARK 500 LEU A 296 -78.20 -84.05 REMARK 500 ASP A 347 86.42 166.36 REMARK 500 PRO A 352 160.89 -48.73 REMARK 500 TYR A 356 33.57 -90.39 REMARK 500 THR A 357 -173.10 -67.46 REMARK 500 ASN A 358 -72.55 -55.21 REMARK 500 ALA A 391 -73.72 -41.65 REMARK 500 ASP A 395 54.20 72.12 REMARK 500 ASN A 396 66.42 -153.86 REMARK 500 ASP A 410 6.88 85.15 REMARK 500 ALA A 419 162.74 177.16 REMARK 500 REMARK 500 THIS ENTRY HAS 233 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR A 19 0.10 SIDE CHAIN REMARK 500 TYR B 187 0.07 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 GLN C 263 11.38 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2003 DISTANCE = 6.48 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD A 480 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD B 480 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD C 480 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD D 480 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1LVL RELATED DB: PDB REMARK 900 DIHYDROLIPOAMIDE DEHYDROGENASE (E.C.1.8.1.4) COMPLEX WITH REMARK 900 NICOTINAMIDE-ADENINE-DINUCLEOTIDE (NAD+) PSEUDOMONAS PUTIDA REMARK 900 RELATED ID: 3LAD RELATED DB: PDB REMARK 900 DIHYDROLIPOAMIDE DEHYDROGENASE (E.C.1.8.1.4) FROM AZOTOBACTER REMARK 900 VINELANDII REMARK 900 RELATED ID: 1OJT RELATED DB: PDB REMARK 900 STRUCTURE OF DIHYDROLIPOAMIDE DEHYDROGENASE FROM NEISSERIA REMARK 900 MENINGITIDIS REMARK 900 RELATED ID: 1LPF RELATED DB: PDB REMARK 900 DIHYDROLIPOAMIDE DEHYDROGENASE (E.C.1.8.1.4) COMPLEX WITH FLAVIN- REMARK 900 ADENINE-DINUCLEOTIDE (FAD) FROM PSEUDOMONAS FLUORESCENS REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE SWISSPROT ENTRY P31023 GIVES THE SEQUENCE FROM REMARK 999 BOURGUIGNON J., MACHEREL D., NEUBURGER M., DOUCE R. REMARK 999 EUR. J. BIOCHEM. 204 865 (1992) WHICH HAS ASN480. REMARK 999 THE KNOWN CONFLICT AT POSITION 480 OF ASN -> HIS IS REMARK 999 THE SEQUENCE USED IN THIS STRUCTURE FROM TURNER S.R., REMARK 999 IRELAND R., RAWSTHORNE S., J. BIOL. CHEM. 267 7745 (1992) DBREF 1DXL A 1 470 UNP P31023 DLDH_PEA 32 501 DBREF 1DXL B 1 470 UNP P31023 DLDH_PEA 32 501 DBREF 1DXL C 1 470 UNP P31023 DLDH_PEA 32 501 DBREF 1DXL D 1 470 UNP P31023 DLDH_PEA 32 501 SEQADV 1DXL HIS A 449 UNP P31023 ASN 480 CONFLICT SEQADV 1DXL HIS B 449 UNP P31023 ASN 480 CONFLICT SEQADV 1DXL HIS C 449 UNP P31023 ASN 480 CONFLICT SEQADV 1DXL HIS D 449 UNP P31023 ASN 480 CONFLICT SEQRES 1 A 470 ALA SER GLY SER ASP GLU ASN ASP VAL VAL ILE ILE GLY SEQRES 2 A 470 GLY GLY PRO GLY GLY TYR VAL ALA ALA ILE LYS ALA ALA SEQRES 3 A 470 GLN LEU GLY PHE LYS THR THR CYS ILE GLU LYS ARG GLY SEQRES 4 A 470 ALA LEU GLY GLY THR CYS LEU ASN VAL GLY CYS ILE PRO SEQRES 5 A 470 SER LYS ALA LEU LEU HIS SER SER HIS MET TYR HIS GLU SEQRES 6 A 470 ALA LYS HIS SER PHE ALA ASN HIS GLY VAL LYS VAL SER SEQRES 7 A 470 ASN VAL GLU ILE ASP LEU ALA ALA MET MET GLY GLN LYS SEQRES 8 A 470 ASP LYS ALA VAL SER ASN LEU THR ARG GLY ILE GLU GLY SEQRES 9 A 470 LEU PHE LYS LYS ASN LYS VAL THR TYR VAL LYS GLY TYR SEQRES 10 A 470 GLY LYS PHE VAL SER PRO SER GLU ILE SER VAL ASP THR SEQRES 11 A 470 ILE GLU GLY GLU ASN THR VAL VAL LYS GLY LYS HIS ILE SEQRES 12 A 470 ILE ILE ALA THR GLY SER ASP VAL LYS SER LEU PRO GLY SEQRES 13 A 470 VAL THR ILE ASP GLU LYS LYS ILE VAL SER SER THR GLY SEQRES 14 A 470 ALA LEU ALA LEU SER GLU ILE PRO LYS LYS LEU VAL VAL SEQRES 15 A 470 ILE GLY ALA GLY TYR ILE GLY LEU GLU MET GLY SER VAL SEQRES 16 A 470 TRP GLY ARG ILE GLY SER GLU VAL THR VAL VAL GLU PHE SEQRES 17 A 470 ALA SER GLU ILE VAL PRO THR MET ASP ALA GLU ILE ARG SEQRES 18 A 470 LYS GLN PHE GLN ARG SER LEU GLU LYS GLN GLY MET LYS SEQRES 19 A 470 PHE LYS LEU LYS THR LYS VAL VAL GLY VAL ASP THR SER SEQRES 20 A 470 GLY ASP GLY VAL LYS LEU THR VAL GLU PRO SER ALA GLY SEQRES 21 A 470 GLY GLU GLN THR ILE ILE GLU ALA ASP VAL VAL LEU VAL SEQRES 22 A 470 SER ALA GLY ARG THR PRO PHE THR SER GLY LEU ASN LEU SEQRES 23 A 470 ASP LYS ILE GLY VAL GLU THR ASP LYS LEU GLY ARG ILE SEQRES 24 A 470 LEU VAL ASN GLU ARG PHE SER THR ASN VAL SER GLY VAL SEQRES 25 A 470 TYR ALA ILE GLY ASP VAL ILE PRO GLY PRO MET LEU ALA SEQRES 26 A 470 HIS LYS ALA GLU GLU ASP GLY VAL ALA CYS VAL GLU TYR SEQRES 27 A 470 LEU ALA GLY LYS VAL GLY HIS VAL ASP TYR ASP LYS VAL SEQRES 28 A 470 PRO GLY VAL VAL TYR THR ASN PRO GLU VAL ALA SER VAL SEQRES 29 A 470 GLY LYS THR GLU GLU GLN VAL LYS GLU THR GLY VAL GLU SEQRES 30 A 470 TYR ARG VAL GLY LYS PHE PRO PHE MET ALA ASN SER ARG SEQRES 31 A 470 ALA LYS ALA ILE ASP ASN ALA GLU GLY LEU VAL LYS ILE SEQRES 32 A 470 ILE ALA GLU LYS GLU THR ASP LYS ILE LEU GLY VAL HIS SEQRES 33 A 470 ILE MET ALA PRO ASN ALA GLY GLU LEU ILE HIS GLU ALA SEQRES 34 A 470 ALA ILE ALA LEU GLN TYR ASP ALA SER SER GLU ASP ILE SEQRES 35 A 470 ALA ARG VAL CYS HIS ALA HIS PRO THR MET SER GLU ALA SEQRES 36 A 470 ILE LYS GLU ALA ALA MET ALA THR TYR ASP LYS PRO ILE SEQRES 37 A 470 HIS ILE SEQRES 1 B 470 ALA SER GLY SER ASP GLU ASN ASP VAL VAL ILE ILE GLY SEQRES 2 B 470 GLY GLY PRO GLY GLY TYR VAL ALA ALA ILE LYS ALA ALA SEQRES 3 B 470 GLN LEU GLY PHE LYS THR THR CYS ILE GLU LYS ARG GLY SEQRES 4 B 470 ALA LEU GLY GLY THR CYS LEU ASN VAL GLY CYS ILE PRO SEQRES 5 B 470 SER LYS ALA LEU LEU HIS SER SER HIS MET TYR HIS GLU SEQRES 6 B 470 ALA LYS HIS SER PHE ALA ASN HIS GLY VAL LYS VAL SER SEQRES 7 B 470 ASN VAL GLU ILE ASP LEU ALA ALA MET MET GLY GLN LYS SEQRES 8 B 470 ASP LYS ALA VAL SER ASN LEU THR ARG GLY ILE GLU GLY SEQRES 9 B 470 LEU PHE LYS LYS ASN LYS VAL THR TYR VAL LYS GLY TYR SEQRES 10 B 470 GLY LYS PHE VAL SER PRO SER GLU ILE SER VAL ASP THR SEQRES 11 B 470 ILE GLU GLY GLU ASN THR VAL VAL LYS GLY LYS HIS ILE SEQRES 12 B 470 ILE ILE ALA THR GLY SER ASP VAL LYS SER LEU PRO GLY SEQRES 13 B 470 VAL THR ILE ASP GLU LYS LYS ILE VAL SER SER THR GLY SEQRES 14 B 470 ALA LEU ALA LEU SER GLU ILE PRO LYS LYS LEU VAL VAL SEQRES 15 B 470 ILE GLY ALA GLY TYR ILE GLY LEU GLU MET GLY SER VAL SEQRES 16 B 470 TRP GLY ARG ILE GLY SER GLU VAL THR VAL VAL GLU PHE SEQRES 17 B 470 ALA SER GLU ILE VAL PRO THR MET ASP ALA GLU ILE ARG SEQRES 18 B 470 LYS GLN PHE GLN ARG SER LEU GLU LYS GLN GLY MET LYS SEQRES 19 B 470 PHE LYS LEU LYS THR LYS VAL VAL GLY VAL ASP THR SER SEQRES 20 B 470 GLY ASP GLY VAL LYS LEU THR VAL GLU PRO SER ALA GLY SEQRES 21 B 470 GLY GLU GLN THR ILE ILE GLU ALA ASP VAL VAL LEU VAL SEQRES 22 B 470 SER ALA GLY ARG THR PRO PHE THR SER GLY LEU ASN LEU SEQRES 23 B 470 ASP LYS ILE GLY VAL GLU THR ASP LYS LEU GLY ARG ILE SEQRES 24 B 470 LEU VAL ASN GLU ARG PHE SER THR ASN VAL SER GLY VAL SEQRES 25 B 470 TYR ALA ILE GLY ASP VAL ILE PRO GLY PRO MET LEU ALA SEQRES 26 B 470 HIS LYS ALA GLU GLU ASP GLY VAL ALA CYS VAL GLU TYR SEQRES 27 B 470 LEU ALA GLY LYS VAL GLY HIS VAL ASP TYR ASP LYS VAL SEQRES 28 B 470 PRO GLY VAL VAL TYR THR ASN PRO GLU VAL ALA SER VAL SEQRES 29 B 470 GLY LYS THR GLU GLU GLN VAL LYS GLU THR GLY VAL GLU SEQRES 30 B 470 TYR ARG VAL GLY LYS PHE PRO PHE MET ALA ASN SER ARG SEQRES 31 B 470 ALA LYS ALA ILE ASP ASN ALA GLU GLY LEU VAL LYS ILE SEQRES 32 B 470 ILE ALA GLU LYS GLU THR ASP LYS ILE LEU GLY VAL HIS SEQRES 33 B 470 ILE MET ALA PRO ASN ALA GLY GLU LEU ILE HIS GLU ALA SEQRES 34 B 470 ALA ILE ALA LEU GLN TYR ASP ALA SER SER GLU ASP ILE SEQRES 35 B 470 ALA ARG VAL CYS HIS ALA HIS PRO THR MET SER GLU ALA SEQRES 36 B 470 ILE LYS GLU ALA ALA MET ALA THR TYR ASP LYS PRO ILE SEQRES 37 B 470 HIS ILE SEQRES 1 C 470 ALA SER GLY SER ASP GLU ASN ASP VAL VAL ILE ILE GLY SEQRES 2 C 470 GLY GLY PRO GLY GLY TYR VAL ALA ALA ILE LYS ALA ALA SEQRES 3 C 470 GLN LEU GLY PHE LYS THR THR CYS ILE GLU LYS ARG GLY SEQRES 4 C 470 ALA LEU GLY GLY THR CYS LEU ASN VAL GLY CYS ILE PRO SEQRES 5 C 470 SER LYS ALA LEU LEU HIS SER SER HIS MET TYR HIS GLU SEQRES 6 C 470 ALA LYS HIS SER PHE ALA ASN HIS GLY VAL LYS VAL SER SEQRES 7 C 470 ASN VAL GLU ILE ASP LEU ALA ALA MET MET GLY GLN LYS SEQRES 8 C 470 ASP LYS ALA VAL SER ASN LEU THR ARG GLY ILE GLU GLY SEQRES 9 C 470 LEU PHE LYS LYS ASN LYS VAL THR TYR VAL LYS GLY TYR SEQRES 10 C 470 GLY LYS PHE VAL SER PRO SER GLU ILE SER VAL ASP THR SEQRES 11 C 470 ILE GLU GLY GLU ASN THR VAL VAL LYS GLY LYS HIS ILE SEQRES 12 C 470 ILE ILE ALA THR GLY SER ASP VAL LYS SER LEU PRO GLY SEQRES 13 C 470 VAL THR ILE ASP GLU LYS LYS ILE VAL SER SER THR GLY SEQRES 14 C 470 ALA LEU ALA LEU SER GLU ILE PRO LYS LYS LEU VAL VAL SEQRES 15 C 470 ILE GLY ALA GLY TYR ILE GLY LEU GLU MET GLY SER VAL SEQRES 16 C 470 TRP GLY ARG ILE GLY SER GLU VAL THR VAL VAL GLU PHE SEQRES 17 C 470 ALA SER GLU ILE VAL PRO THR MET ASP ALA GLU ILE ARG SEQRES 18 C 470 LYS GLN PHE GLN ARG SER LEU GLU LYS GLN GLY MET LYS SEQRES 19 C 470 PHE LYS LEU LYS THR LYS VAL VAL GLY VAL ASP THR SER SEQRES 20 C 470 GLY ASP GLY VAL LYS LEU THR VAL GLU PRO SER ALA GLY SEQRES 21 C 470 GLY GLU GLN THR ILE ILE GLU ALA ASP VAL VAL LEU VAL SEQRES 22 C 470 SER ALA GLY ARG THR PRO PHE THR SER GLY LEU ASN LEU SEQRES 23 C 470 ASP LYS ILE GLY VAL GLU THR ASP LYS LEU GLY ARG ILE SEQRES 24 C 470 LEU VAL ASN GLU ARG PHE SER THR ASN VAL SER GLY VAL SEQRES 25 C 470 TYR ALA ILE GLY ASP VAL ILE PRO GLY PRO MET LEU ALA SEQRES 26 C 470 HIS LYS ALA GLU GLU ASP GLY VAL ALA CYS VAL GLU TYR SEQRES 27 C 470 LEU ALA GLY LYS VAL GLY HIS VAL ASP TYR ASP LYS VAL SEQRES 28 C 470 PRO GLY VAL VAL TYR THR ASN PRO GLU VAL ALA SER VAL SEQRES 29 C 470 GLY LYS THR GLU GLU GLN VAL LYS GLU THR GLY VAL GLU SEQRES 30 C 470 TYR ARG VAL GLY LYS PHE PRO PHE MET ALA ASN SER ARG SEQRES 31 C 470 ALA LYS ALA ILE ASP ASN ALA GLU GLY LEU VAL LYS ILE SEQRES 32 C 470 ILE ALA GLU LYS GLU THR ASP LYS ILE LEU GLY VAL HIS SEQRES 33 C 470 ILE MET ALA PRO ASN ALA GLY GLU LEU ILE HIS GLU ALA SEQRES 34 C 470 ALA ILE ALA LEU GLN TYR ASP ALA SER SER GLU ASP ILE SEQRES 35 C 470 ALA ARG VAL CYS HIS ALA HIS PRO THR MET SER GLU ALA SEQRES 36 C 470 ILE LYS GLU ALA ALA MET ALA THR TYR ASP LYS PRO ILE SEQRES 37 C 470 HIS ILE SEQRES 1 D 470 ALA SER GLY SER ASP GLU ASN ASP VAL VAL ILE ILE GLY SEQRES 2 D 470 GLY GLY PRO GLY GLY TYR VAL ALA ALA ILE LYS ALA ALA SEQRES 3 D 470 GLN LEU GLY PHE LYS THR THR CYS ILE GLU LYS ARG GLY SEQRES 4 D 470 ALA LEU GLY GLY THR CYS LEU ASN VAL GLY CYS ILE PRO SEQRES 5 D 470 SER LYS ALA LEU LEU HIS SER SER HIS MET TYR HIS GLU SEQRES 6 D 470 ALA LYS HIS SER PHE ALA ASN HIS GLY VAL LYS VAL SER SEQRES 7 D 470 ASN VAL GLU ILE ASP LEU ALA ALA MET MET GLY GLN LYS SEQRES 8 D 470 ASP LYS ALA VAL SER ASN LEU THR ARG GLY ILE GLU GLY SEQRES 9 D 470 LEU PHE LYS LYS ASN LYS VAL THR TYR VAL LYS GLY TYR SEQRES 10 D 470 GLY LYS PHE VAL SER PRO SER GLU ILE SER VAL ASP THR SEQRES 11 D 470 ILE GLU GLY GLU ASN THR VAL VAL LYS GLY LYS HIS ILE SEQRES 12 D 470 ILE ILE ALA THR GLY SER ASP VAL LYS SER LEU PRO GLY SEQRES 13 D 470 VAL THR ILE ASP GLU LYS LYS ILE VAL SER SER THR GLY SEQRES 14 D 470 ALA LEU ALA LEU SER GLU ILE PRO LYS LYS LEU VAL VAL SEQRES 15 D 470 ILE GLY ALA GLY TYR ILE GLY LEU GLU MET GLY SER VAL SEQRES 16 D 470 TRP GLY ARG ILE GLY SER GLU VAL THR VAL VAL GLU PHE SEQRES 17 D 470 ALA SER GLU ILE VAL PRO THR MET ASP ALA GLU ILE ARG SEQRES 18 D 470 LYS GLN PHE GLN ARG SER LEU GLU LYS GLN GLY MET LYS SEQRES 19 D 470 PHE LYS LEU LYS THR LYS VAL VAL GLY VAL ASP THR SER SEQRES 20 D 470 GLY ASP GLY VAL LYS LEU THR VAL GLU PRO SER ALA GLY SEQRES 21 D 470 GLY GLU GLN THR ILE ILE GLU ALA ASP VAL VAL LEU VAL SEQRES 22 D 470 SER ALA GLY ARG THR PRO PHE THR SER GLY LEU ASN LEU SEQRES 23 D 470 ASP LYS ILE GLY VAL GLU THR ASP LYS LEU GLY ARG ILE SEQRES 24 D 470 LEU VAL ASN GLU ARG PHE SER THR ASN VAL SER GLY VAL SEQRES 25 D 470 TYR ALA ILE GLY ASP VAL ILE PRO GLY PRO MET LEU ALA SEQRES 26 D 470 HIS LYS ALA GLU GLU ASP GLY VAL ALA CYS VAL GLU TYR SEQRES 27 D 470 LEU ALA GLY LYS VAL GLY HIS VAL ASP TYR ASP LYS VAL SEQRES 28 D 470 PRO GLY VAL VAL TYR THR ASN PRO GLU VAL ALA SER VAL SEQRES 29 D 470 GLY LYS THR GLU GLU GLN VAL LYS GLU THR GLY VAL GLU SEQRES 30 D 470 TYR ARG VAL GLY LYS PHE PRO PHE MET ALA ASN SER ARG SEQRES 31 D 470 ALA LYS ALA ILE ASP ASN ALA GLU GLY LEU VAL LYS ILE SEQRES 32 D 470 ILE ALA GLU LYS GLU THR ASP LYS ILE LEU GLY VAL HIS SEQRES 33 D 470 ILE MET ALA PRO ASN ALA GLY GLU LEU ILE HIS GLU ALA SEQRES 34 D 470 ALA ILE ALA LEU GLN TYR ASP ALA SER SER GLU ASP ILE SEQRES 35 D 470 ALA ARG VAL CYS HIS ALA HIS PRO THR MET SER GLU ALA SEQRES 36 D 470 ILE LYS GLU ALA ALA MET ALA THR TYR ASP LYS PRO ILE SEQRES 37 D 470 HIS ILE HET FAD A 480 53 HET FAD B 480 53 HET FAD C 480 53 HET FAD D 480 53 HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE FORMUL 5 FAD 4(C27 H33 N9 O15 P2) FORMUL 9 HOH *104(H2 O) HELIX 1 1 PRO A 16 LEU A 28 1 13 HELIX 2 2 CYS A 45 VAL A 48 1 4 HELIX 3 3 CYS A 50 HIS A 68 1 19 HELIX 4 4 PHE A 70 HIS A 73 1 4 HELIX 5 5 LEU A 84 ASN A 109 1 26 HELIX 6 6 SER A 167 ALA A 172 1 6 HELIX 7 7 TYR A 187 ILE A 199 1 13 HELIX 8 8 ALA A 218 LYS A 230 1 13 HELIX 9 9 ALA A 325 LEU A 339 1 15 HELIX 10 10 GLU A 368 THR A 374 1 7 HELIX 11 11 PHE A 385 ALA A 387 5 3 HELIX 12 12 SER A 389 ILE A 394 1 6 HELIX 13 13 ALA A 422 GLN A 434 1 13 HELIX 14 14 SER A 439 ALA A 443 1 5 HELIX 15 15 MET A 452 TYR A 464 5 13 HELIX 16 16 PRO B 16 LEU B 28 1 13 HELIX 17 17 CYS B 50 HIS B 68 1 19 HELIX 18 18 PHE B 70 HIS B 73 5 4 HELIX 19 19 LEU B 84 ASN B 109 1 26 HELIX 20 20 SER B 167 ALA B 172 1 6 HELIX 21 21 TYR B 187 ILE B 199 1 13 HELIX 22 22 ALA B 218 LYS B 230 1 13 HELIX 23 23 ALA B 325 LEU B 339 1 15 HELIX 24 24 GLU B 368 GLU B 373 1 6 HELIX 25 25 PHE B 385 ALA B 387 5 3 HELIX 26 26 SER B 389 ILE B 394 1 6 HELIX 27 27 ALA B 422 TYR B 435 1 14 HELIX 28 28 SER B 439 ALA B 443 1 5 HELIX 29 29 MET B 452 TYR B 464 5 13 HELIX 30 30 PRO C 16 LEU C 28 1 13 HELIX 31 31 THR C 44 VAL C 48 1 5 HELIX 32 32 CYS C 50 HIS C 68 1 19 HELIX 33 33 PHE C 70 GLY C 74 1 5 HELIX 34 34 LEU C 84 ASN C 109 1 26 HELIX 35 35 SER C 167 ALA C 172 1 6 HELIX 36 36 TYR C 187 ILE C 199 1 13 HELIX 37 37 ALA C 218 GLN C 231 1 14 HELIX 38 38 ALA C 325 ALA C 340 1 16 HELIX 39 39 GLU C 368 GLU C 373 1 6 HELIX 40 40 PHE C 385 ALA C 387 5 3 HELIX 41 41 SER C 389 ILE C 394 1 6 HELIX 42 42 ALA C 422 TYR C 435 1 14 HELIX 43 43 SER C 439 ARG C 444 1 6 HELIX 44 44 MET C 452 TYR C 464 5 13 HELIX 45 45 PRO D 16 LEU D 28 1 13 HELIX 46 46 THR D 44 VAL D 48 1 5 HELIX 47 47 CYS D 50 HIS D 68 1 19 HELIX 48 48 PHE D 70 HIS D 73 5 4 HELIX 49 49 LEU D 84 ASN D 109 1 26 HELIX 50 50 SER D 167 ALA D 172 1 6 HELIX 51 51 TYR D 187 ILE D 199 1 13 HELIX 52 52 ALA D 218 LYS D 230 1 13 HELIX 53 53 ALA D 325 LEU D 339 1 15 HELIX 54 54 TYR D 348 LYS D 350 5 3 HELIX 55 55 GLU D 368 THR D 374 1 7 HELIX 56 56 PHE D 385 ALA D 387 5 3 HELIX 57 57 SER D 389 ILE D 394 1 6 HELIX 58 58 ALA D 422 LEU D 433 1 12 HELIX 59 59 SER D 439 ARG D 444 1 6 HELIX 60 60 MET D 452 TYR D 464 5 13 SHEET 1 AA 5 VAL A 312 ALA A 314 0 SHEET 2 AA 5 HIS A 142 ILE A 145 1 N ILE A 143 O TYR A 313 SHEET 3 AA 5 VAL A 9 ILE A 12 1 N VAL A 10 O HIS A 142 SHEET 4 AA 5 THR A 32 GLU A 36 1 N THR A 33 O VAL A 9 SHEET 5 AA 5 VAL A 111 LYS A 115 1 N THR A 112 O THR A 32 SHEET 1 AB 3 THR A 136 LYS A 139 0 SHEET 2 AB 3 GLU A 125 VAL A 128 -1 N VAL A 128 O THR A 136 SHEET 3 AB 3 GLY A 118 SER A 122 -1 N SER A 122 O GLU A 125 SHEET 1 AC 2 SER A 149 VAL A 151 0 SHEET 2 AC 2 ARG A 277 PRO A 279 -1 N THR A 278 O ASP A 150 SHEET 1 AD 3 GLU A 202 VAL A 205 0 SHEET 2 AD 3 LYS A 179 VAL A 182 1 N LEU A 180 O GLU A 202 SHEET 3 AD 3 VAL A 270 LEU A 272 1 N VAL A 270 O VAL A 181 SHEET 1 AE 3 THR A 239 VAL A 241 0 SHEET 2 AE 3 VAL A 251 PRO A 257 -1 N GLU A 256 O LYS A 240 SHEET 3 AE 3 THR A 264 ALA A 268 -1 N ALA A 268 O VAL A 251 SHEET 1 AF 5 GLY A 353 VAL A 355 0 SHEET 2 AF 5 GLU A 360 GLY A 365 -1 N SER A 363 O GLY A 353 SHEET 3 AF 5 ILE A 412 ALA A 419 -1 N ALA A 419 O GLU A 360 SHEET 4 AF 5 LEU A 400 GLU A 406 -1 N ILE A 404 O LEU A 413 SHEET 5 AF 5 TYR A 378 PRO A 384 -1 N PHE A 383 O VAL A 401 SHEET 1 BA 5 VAL B 312 ALA B 314 0 SHEET 2 BA 5 HIS B 142 ILE B 145 1 N ILE B 143 O TYR B 313 SHEET 3 BA 5 VAL B 9 ILE B 12 1 N VAL B 10 O HIS B 142 SHEET 4 BA 5 THR B 32 GLU B 36 1 N THR B 33 O VAL B 9 SHEET 5 BA 5 THR B 112 LYS B 115 1 N THR B 112 O CYS B 34 SHEET 1 BB 2 GLU B 125 SER B 127 0 SHEET 2 BB 2 VAL B 137 LYS B 139 -1 N VAL B 138 O ILE B 126 SHEET 1 BD 3 LYS B 179 VAL B 182 0 SHEET 2 BD 3 GLU B 202 VAL B 206 1 N GLU B 202 O LEU B 180 SHEET 3 BD 3 LYS B 234 LYS B 236 1 N LYS B 234 O VAL B 205 SHEET 1 BE 3 ILE B 265 GLU B 267 0 SHEET 2 BE 3 LYS B 252 PRO B 257 -1 N LEU B 253 O ILE B 266 SHEET 3 BE 3 THR B 239 GLY B 243 -1 N GLY B 243 O THR B 254 SHEET 1 BF 5 GLY B 353 VAL B 355 0 SHEET 2 BF 5 GLU B 360 GLY B 365 -1 N SER B 363 O GLY B 353 SHEET 3 BF 5 ILE B 412 ALA B 419 -1 N ALA B 419 O GLU B 360 SHEET 4 BF 5 LEU B 400 GLU B 406 -1 N ILE B 404 O LEU B 413 SHEET 5 BF 5 TYR B 378 PRO B 384 -1 N PHE B 383 O VAL B 401 SHEET 1 CA 5 VAL C 312 ALA C 314 0 SHEET 2 CA 5 HIS C 142 ILE C 145 1 N ILE C 143 O TYR C 313 SHEET 3 CA 5 VAL C 9 ILE C 12 1 N VAL C 10 O HIS C 142 SHEET 4 CA 5 THR C 32 GLU C 36 1 N THR C 33 O VAL C 9 SHEET 5 CA 5 VAL C 111 LYS C 115 1 N THR C 112 O THR C 32 SHEET 1 CB 3 GLY C 118 PHE C 120 0 SHEET 2 CB 3 GLU C 125 VAL C 128 -1 N SER C 127 O LYS C 119 SHEET 3 CB 3 VAL C 137 LYS C 139 -1 N VAL C 138 O ILE C 126 SHEET 1 CC 2 SER C 149 VAL C 151 0 SHEET 2 CC 2 ARG C 277 PRO C 279 -1 N THR C 278 O ASP C 150 SHEET 1 CD 3 GLU C 202 VAL C 205 0 SHEET 2 CD 3 LYS C 179 VAL C 182 1 N LEU C 180 O GLU C 202 SHEET 3 CD 3 VAL C 270 LEU C 272 1 N VAL C 270 O VAL C 181 SHEET 1 CF 5 GLY C 353 VAL C 355 0 SHEET 2 CF 5 GLU C 360 GLY C 365 -1 N SER C 363 O GLY C 353 SHEET 3 CF 5 ILE C 412 ALA C 419 -1 N ALA C 419 O GLU C 360 SHEET 4 CF 5 LEU C 400 GLU C 406 -1 N ILE C 404 O LEU C 413 SHEET 5 CF 5 TYR C 378 PRO C 384 -1 N PHE C 383 O VAL C 401 SHEET 1 DA 5 VAL D 312 ALA D 314 0 SHEET 2 DA 5 HIS D 142 ILE D 145 1 N ILE D 143 O TYR D 313 SHEET 3 DA 5 VAL D 9 ILE D 12 1 N VAL D 10 O HIS D 142 SHEET 4 DA 5 THR D 32 GLU D 36 1 N THR D 33 O VAL D 9 SHEET 5 DA 5 THR D 112 LYS D 115 1 N THR D 112 O CYS D 34 SHEET 1 DB 2 TYR D 117 SER D 122 0 SHEET 2 DB 2 GLU D 125 ASP D 129 -1 N ASP D 129 O TYR D 117 SHEET 1 DC 2 SER D 149 VAL D 151 0 SHEET 2 DC 2 ARG D 277 PRO D 279 -1 N THR D 278 O ASP D 150 SHEET 1 DD 4 VAL D 270 LEU D 272 0 SHEET 2 DD 4 LYS D 179 VAL D 182 1 N VAL D 181 O VAL D 270 SHEET 3 DD 4 GLU D 202 VAL D 206 1 N GLU D 202 O LEU D 180 SHEET 4 DD 4 LYS D 234 LYS D 236 1 N LYS D 234 O VAL D 205 SHEET 1 DE 3 THR D 264 ALA D 268 0 SHEET 2 DE 3 VAL D 251 GLU D 256 -1 N VAL D 255 O THR D 264 SHEET 3 DE 3 LYS D 240 GLY D 243 -1 N GLY D 243 O THR D 254 SHEET 1 DF 5 GLY D 353 VAL D 355 0 SHEET 2 DF 5 GLU D 360 GLY D 365 -1 N SER D 363 O GLY D 353 SHEET 3 DF 5 ILE D 412 ALA D 419 -1 N ALA D 419 O GLU D 360 SHEET 4 DF 5 LEU D 400 GLU D 406 -1 N ILE D 404 O LEU D 413 SHEET 5 DF 5 TYR D 378 PRO D 384 -1 N PHE D 383 O VAL D 401 SSBOND 1 CYS A 45 CYS A 50 1555 1555 2.06 SSBOND 2 CYS B 45 CYS B 50 1555 1555 2.05 SSBOND 3 CYS C 45 CYS C 50 1555 1555 2.08 SSBOND 4 CYS D 45 CYS D 50 1555 1555 2.06 CISPEP 1 HIS A 449 PRO A 450 0 0.74 CISPEP 2 HIS B 449 PRO B 450 0 0.08 CISPEP 3 HIS C 449 PRO C 450 0 0.10 CISPEP 4 HIS D 449 PRO D 450 0 -1.79 SITE 1 AC1 33 ILE A 12 GLY A 15 PRO A 16 GLY A 17 SITE 2 AC1 33 GLU A 36 LYS A 37 ARG A 38 GLY A 43 SITE 3 AC1 33 THR A 44 CYS A 45 VAL A 48 GLY A 49 SITE 4 AC1 33 CYS A 50 LYS A 54 GLY A 116 TYR A 117 SITE 5 AC1 33 GLY A 118 ALA A 146 THR A 147 GLY A 148 SITE 6 AC1 33 SER A 149 SER A 167 TYR A 187 ILE A 188 SITE 7 AC1 33 ARG A 277 ASP A 317 MET A 323 LEU A 324 SITE 8 AC1 33 ALA A 325 HIS A 326 ALA A 328 TYR A 356 SITE 9 AC1 33 HIS B 449 SITE 1 AC2 32 HIS A 449 ILE B 12 GLY B 15 PRO B 16 SITE 2 AC2 32 GLY B 17 ILE B 35 GLU B 36 LYS B 37 SITE 3 AC2 32 ARG B 38 GLY B 43 THR B 44 CYS B 45 SITE 4 AC2 32 GLY B 49 CYS B 50 LYS B 54 GLY B 116 SITE 5 AC2 32 TYR B 117 GLY B 118 ALA B 146 THR B 147 SITE 6 AC2 32 GLY B 148 SER B 149 ILE B 188 ARG B 277 SITE 7 AC2 32 LEU B 284 ASP B 317 MET B 323 LEU B 324 SITE 8 AC2 32 ALA B 325 HIS B 326 ALA B 328 HOH B2006 SITE 1 AC3 33 ILE C 12 GLY C 13 GLY C 14 GLY C 15 SITE 2 AC3 33 PRO C 16 GLY C 17 GLU C 36 LYS C 37 SITE 3 AC3 33 ARG C 38 GLY C 43 THR C 44 CYS C 45 SITE 4 AC3 33 VAL C 48 GLY C 49 LYS C 54 GLY C 116 SITE 5 AC3 33 TYR C 117 GLY C 118 ALA C 146 THR C 147 SITE 6 AC3 33 GLY C 148 ILE C 188 ARG C 277 PHE C 280 SITE 7 AC3 33 ASP C 317 MET C 323 LEU C 324 ALA C 325 SITE 8 AC3 33 HIS C 326 ALA C 328 TYR C 356 HOH C2001 SITE 9 AC3 33 HIS D 449 SITE 1 AC4 32 HIS C 449 ILE D 12 GLY D 14 GLY D 15 SITE 2 AC4 32 PRO D 16 GLY D 17 ILE D 35 GLU D 36 SITE 3 AC4 32 LYS D 37 ARG D 38 GLY D 43 THR D 44 SITE 4 AC4 32 CYS D 45 GLY D 49 CYS D 50 LYS D 54 SITE 5 AC4 32 GLY D 116 TYR D 117 GLY D 118 ALA D 146 SITE 6 AC4 32 THR D 147 GLY D 148 SER D 149 ILE D 188 SITE 7 AC4 32 ARG D 277 ASP D 317 MET D 323 LEU D 324 SITE 8 AC4 32 ALA D 325 HIS D 326 ALA D 328 TYR D 356 CRYST1 100.560 108.330 202.190 90.00 90.00 90.00 P 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009944 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009231 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004946 0.00000 MTRIX1 1 -0.561818 -0.313054 -0.765740 76.64250 1 MTRIX2 1 -0.330398 -0.763691 0.554628 37.44780 1 MTRIX3 1 -0.758418 0.564599 0.325623 28.29360 1 MTRIX1 2 -0.056013 0.094754 -0.993924 -50.76830 1 MTRIX2 2 -0.083306 0.991572 0.099225 -35.50890 1 MTRIX3 2 0.994949 0.088358 -0.047647 49.56640 1 MTRIX1 3 0.753692 -0.355954 -0.552490 79.63340 1 MTRIX2 3 -0.618841 -0.667443 -0.414192 107.97370 1 MTRIX3 3 -0.221322 0.654077 -0.723325 63.04910 1