data_1DY0 # _entry.id 1DY0 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.398 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1DY0 pdb_00001dy0 10.2210/pdb1dy0/pdb PDBE EBI-4554 ? ? WWPDB D_1290004554 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2000-04-11 2 'Structure model' 1 1 2011-05-07 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-06-28 5 'Structure model' 1 4 2019-05-22 6 'Structure model' 1 5 2023-12-06 7 'Structure model' 1 6 2024-11-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' Advisory 4 4 'Structure model' 'Data collection' 5 5 'Structure model' 'Data collection' 6 5 'Structure model' 'Refinement description' 7 6 'Structure model' Advisory 8 6 'Structure model' 'Data collection' 9 6 'Structure model' 'Database references' 10 6 'Structure model' 'Derived calculations' 11 6 'Structure model' 'Refinement description' 12 7 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' diffrn_source 2 4 'Structure model' pdbx_unobs_or_zero_occ_atoms 3 5 'Structure model' refine 4 6 'Structure model' chem_comp_atom 5 6 'Structure model' chem_comp_bond 6 6 'Structure model' database_2 7 6 'Structure model' pdbx_initial_refinement_model 8 6 'Structure model' pdbx_struct_conn_angle 9 6 'Structure model' pdbx_unobs_or_zero_occ_atoms 10 6 'Structure model' struct_conn 11 6 'Structure model' struct_site 12 7 'Structure model' pdbx_entry_details 13 7 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_diffrn_source.pdbx_wavelength_list' 2 4 'Structure model' '_diffrn_source.type' 3 5 'Structure model' '_refine.pdbx_ls_cross_valid_method' 4 6 'Structure model' '_database_2.pdbx_DOI' 5 6 'Structure model' '_database_2.pdbx_database_accession' 6 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 7 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 8 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 9 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 10 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 11 6 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 12 6 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 13 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 14 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 15 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 16 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 17 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 18 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_symmetry' 19 6 'Structure model' '_pdbx_struct_conn_angle.value' 20 6 'Structure model' '_struct_conn.pdbx_dist_value' 21 6 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 22 6 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 23 6 'Structure model' '_struct_conn.ptnr1_label_asym_id' 24 6 'Structure model' '_struct_conn.ptnr1_label_atom_id' 25 6 'Structure model' '_struct_conn.ptnr1_label_comp_id' 26 6 'Structure model' '_struct_conn.ptnr1_label_seq_id' 27 6 'Structure model' '_struct_conn.ptnr1_symmetry' 28 6 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 29 6 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 30 6 'Structure model' '_struct_conn.ptnr2_label_asym_id' 31 6 'Structure model' '_struct_conn.ptnr2_label_atom_id' 32 6 'Structure model' '_struct_conn.ptnr2_label_comp_id' 33 6 'Structure model' '_struct_conn.ptnr2_label_seq_id' 34 6 'Structure model' '_struct_conn.ptnr2_symmetry' 35 6 'Structure model' '_struct_site.pdbx_auth_asym_id' 36 6 'Structure model' '_struct_site.pdbx_auth_comp_id' 37 6 'Structure model' '_struct_site.pdbx_auth_seq_id' 38 7 'Structure model' '_pdbx_entry_details.has_protein_modification' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1DY0 _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2000-01-21 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 1KOE unspecified 'ENDOSTATIN, C-TERMINAL 184 RESIDUES OF ALPHA1 CHAIN OF COLLAGEN XVIII' PDB 1DY1 unspecified 'MURINE ENDOSTATIN, CRYSTAL FORM III, COLLAGEN ALPHA1(XVIII) CHAIN' PDB 1DY2 unspecified 'MURINE COLLAGEN ALPHA1(XV), ENDOSTATIN DOMAIN MURINE ENDOSTATIN, CRYSTAL FORM III, COLLAGEN ALPHA1(XVIII) CHAIN' # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Hohenester, E.' 1 'Sasaki, T.' 2 'Timpl, R.' 3 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Variable Zinc Coordination in Endostatin' J.Mol.Biol. 297 1 ? 2000 JMOBAK UK 0022-2836 0070 ? 10704302 10.1006/JMBI.2000.3553 1 'Crystal Structure of the Angiogenesis Inhibitor Endostatin at 1.5 Angstrom Resolution' 'Embo J.' 17 1656 ? 1998 EMJODG UK 0261-4189 0897 ? 9501087 10.1093/EMBOJ/17.6.1656 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Hohenester, E.' 1 ? primary 'Sasaki, T.' 2 ? primary 'Mann, K.' 3 ? primary 'Timpl, R.' 4 ? 1 'Hohenester, E.' 5 ? 1 'Sasaki, T.' 6 ? 1 'Olsen, B.R.' 7 ? 1 'Timpl, R.' 8 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'COLLAGEN ALPHA1(XVIII) CHAIN' 20753.387 1 ? YES 'ENDOSTATIN DOMAIN' ? 2 non-polymer syn 'ZINC ION' 65.409 2 ? ? ? ? 3 water nat water 18.015 44 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;APLAHTHQDFQPVLHLVALNTPLSGGMRGIRGADFQCFQQARAVGLSGTFRAFLSSRLQDLYSIVRRADRGSVPIVNLKD EVLSPSWDSLFSGSQGQLQPGARIFSFDGRDVLRHPAWPQKSVWHGSDPSGRRLMESYCETWRTETTGATGQASSLLSGR LLEQKAASCHNSYIVLCIENSFMTSFSK ; _entity_poly.pdbx_seq_one_letter_code_can ;APLAHTHQDFQPVLHLVALNTPLSGGMRGIRGADFQCFQQARAVGLSGTFRAFLSSRLQDLYSIVRRADRGSVPIVNLKD EVLSPSWDSLFSGSQGQLQPGARIFSFDGRDVLRHPAWPQKSVWHGSDPSGRRLMESYCETWRTETTGATGQASSLLSGR LLEQKAASCHNSYIVLCIENSFMTSFSK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'ZINC ION' ZN 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 PRO n 1 3 LEU n 1 4 ALA n 1 5 HIS n 1 6 THR n 1 7 HIS n 1 8 GLN n 1 9 ASP n 1 10 PHE n 1 11 GLN n 1 12 PRO n 1 13 VAL n 1 14 LEU n 1 15 HIS n 1 16 LEU n 1 17 VAL n 1 18 ALA n 1 19 LEU n 1 20 ASN n 1 21 THR n 1 22 PRO n 1 23 LEU n 1 24 SER n 1 25 GLY n 1 26 GLY n 1 27 MET n 1 28 ARG n 1 29 GLY n 1 30 ILE n 1 31 ARG n 1 32 GLY n 1 33 ALA n 1 34 ASP n 1 35 PHE n 1 36 GLN n 1 37 CYS n 1 38 PHE n 1 39 GLN n 1 40 GLN n 1 41 ALA n 1 42 ARG n 1 43 ALA n 1 44 VAL n 1 45 GLY n 1 46 LEU n 1 47 SER n 1 48 GLY n 1 49 THR n 1 50 PHE n 1 51 ARG n 1 52 ALA n 1 53 PHE n 1 54 LEU n 1 55 SER n 1 56 SER n 1 57 ARG n 1 58 LEU n 1 59 GLN n 1 60 ASP n 1 61 LEU n 1 62 TYR n 1 63 SER n 1 64 ILE n 1 65 VAL n 1 66 ARG n 1 67 ARG n 1 68 ALA n 1 69 ASP n 1 70 ARG n 1 71 GLY n 1 72 SER n 1 73 VAL n 1 74 PRO n 1 75 ILE n 1 76 VAL n 1 77 ASN n 1 78 LEU n 1 79 LYS n 1 80 ASP n 1 81 GLU n 1 82 VAL n 1 83 LEU n 1 84 SER n 1 85 PRO n 1 86 SER n 1 87 TRP n 1 88 ASP n 1 89 SER n 1 90 LEU n 1 91 PHE n 1 92 SER n 1 93 GLY n 1 94 SER n 1 95 GLN n 1 96 GLY n 1 97 GLN n 1 98 LEU n 1 99 GLN n 1 100 PRO n 1 101 GLY n 1 102 ALA n 1 103 ARG n 1 104 ILE n 1 105 PHE n 1 106 SER n 1 107 PHE n 1 108 ASP n 1 109 GLY n 1 110 ARG n 1 111 ASP n 1 112 VAL n 1 113 LEU n 1 114 ARG n 1 115 HIS n 1 116 PRO n 1 117 ALA n 1 118 TRP n 1 119 PRO n 1 120 GLN n 1 121 LYS n 1 122 SER n 1 123 VAL n 1 124 TRP n 1 125 HIS n 1 126 GLY n 1 127 SER n 1 128 ASP n 1 129 PRO n 1 130 SER n 1 131 GLY n 1 132 ARG n 1 133 ARG n 1 134 LEU n 1 135 MET n 1 136 GLU n 1 137 SER n 1 138 TYR n 1 139 CYS n 1 140 GLU n 1 141 THR n 1 142 TRP n 1 143 ARG n 1 144 THR n 1 145 GLU n 1 146 THR n 1 147 THR n 1 148 GLY n 1 149 ALA n 1 150 THR n 1 151 GLY n 1 152 GLN n 1 153 ALA n 1 154 SER n 1 155 SER n 1 156 LEU n 1 157 LEU n 1 158 SER n 1 159 GLY n 1 160 ARG n 1 161 LEU n 1 162 LEU n 1 163 GLU n 1 164 GLN n 1 165 LYS n 1 166 ALA n 1 167 ALA n 1 168 SER n 1 169 CYS n 1 170 HIS n 1 171 ASN n 1 172 SER n 1 173 TYR n 1 174 ILE n 1 175 VAL n 1 176 LEU n 1 177 CYS n 1 178 ILE n 1 179 GLU n 1 180 ASN n 1 181 SER n 1 182 PHE n 1 183 MET n 1 184 THR n 1 185 SER n 1 186 PHE n 1 187 SER n 1 188 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name MOUSE _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'MUS MUSCULUS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'HOMO SAPIENS' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 9606 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line EBNA-293 _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell 'EMBRYONIC KIDNEY CELL' _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector PCEP-PU _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 128 ? ? ? A . n A 1 2 PRO 2 129 ? ? ? A . n A 1 3 LEU 3 130 ? ? ? A . n A 1 4 ALA 4 131 131 ALA ALA A . n A 1 5 HIS 5 132 132 HIS HIS A . n A 1 6 THR 6 133 133 THR THR A . n A 1 7 HIS 7 134 134 HIS HIS A . n A 1 8 GLN 8 135 135 GLN GLN A . n A 1 9 ASP 9 136 136 ASP ASP A . n A 1 10 PHE 10 137 137 PHE PHE A . n A 1 11 GLN 11 138 138 GLN GLN A . n A 1 12 PRO 12 139 139 PRO PRO A . n A 1 13 VAL 13 140 140 VAL VAL A . n A 1 14 LEU 14 141 141 LEU LEU A . n A 1 15 HIS 15 142 142 HIS HIS A . n A 1 16 LEU 16 143 143 LEU LEU A . n A 1 17 VAL 17 144 144 VAL VAL A . n A 1 18 ALA 18 145 145 ALA ALA A . n A 1 19 LEU 19 146 146 LEU LEU A . n A 1 20 ASN 20 147 147 ASN ASN A . n A 1 21 THR 21 148 148 THR THR A . n A 1 22 PRO 22 149 149 PRO PRO A . n A 1 23 LEU 23 150 150 LEU LEU A . n A 1 24 SER 24 151 151 SER SER A . n A 1 25 GLY 25 152 152 GLY GLY A . n A 1 26 GLY 26 153 153 GLY GLY A . n A 1 27 MET 27 154 154 MET MET A . n A 1 28 ARG 28 155 155 ARG ARG A . n A 1 29 GLY 29 156 156 GLY GLY A . n A 1 30 ILE 30 157 157 ILE ILE A . n A 1 31 ARG 31 158 158 ARG ARG A . n A 1 32 GLY 32 159 159 GLY GLY A . n A 1 33 ALA 33 160 160 ALA ALA A . n A 1 34 ASP 34 161 161 ASP ASP A . n A 1 35 PHE 35 162 162 PHE PHE A . n A 1 36 GLN 36 163 163 GLN GLN A . n A 1 37 CYS 37 164 164 CYS CYS A . n A 1 38 PHE 38 165 165 PHE PHE A . n A 1 39 GLN 39 166 166 GLN GLN A . n A 1 40 GLN 40 167 167 GLN GLN A . n A 1 41 ALA 41 168 168 ALA ALA A . n A 1 42 ARG 42 169 169 ARG ARG A . n A 1 43 ALA 43 170 170 ALA ALA A . n A 1 44 VAL 44 171 171 VAL VAL A . n A 1 45 GLY 45 172 172 GLY GLY A . n A 1 46 LEU 46 173 173 LEU LEU A . n A 1 47 SER 47 174 174 SER SER A . n A 1 48 GLY 48 175 175 GLY GLY A . n A 1 49 THR 49 176 176 THR THR A . n A 1 50 PHE 50 177 177 PHE PHE A . n A 1 51 ARG 51 178 178 ARG ARG A . n A 1 52 ALA 52 179 179 ALA ALA A . n A 1 53 PHE 53 180 180 PHE PHE A . n A 1 54 LEU 54 181 181 LEU LEU A . n A 1 55 SER 55 182 182 SER SER A . n A 1 56 SER 56 183 183 SER SER A . n A 1 57 ARG 57 184 184 ARG ARG A . n A 1 58 LEU 58 185 185 LEU LEU A . n A 1 59 GLN 59 186 186 GLN GLN A . n A 1 60 ASP 60 187 187 ASP ASP A . n A 1 61 LEU 61 188 188 LEU LEU A . n A 1 62 TYR 62 189 189 TYR TYR A . n A 1 63 SER 63 190 190 SER SER A . n A 1 64 ILE 64 191 191 ILE ILE A . n A 1 65 VAL 65 192 192 VAL VAL A . n A 1 66 ARG 66 193 193 ARG ARG A . n A 1 67 ARG 67 194 194 ARG ARG A . n A 1 68 ALA 68 195 195 ALA ALA A . n A 1 69 ASP 69 196 196 ASP ASP A . n A 1 70 ARG 70 197 197 ARG ARG A . n A 1 71 GLY 71 198 198 GLY GLY A . n A 1 72 SER 72 199 199 SER SER A . n A 1 73 VAL 73 200 200 VAL VAL A . n A 1 74 PRO 74 201 201 PRO PRO A . n A 1 75 ILE 75 202 202 ILE ILE A . n A 1 76 VAL 76 203 203 VAL VAL A . n A 1 77 ASN 77 204 204 ASN ASN A . n A 1 78 LEU 78 205 205 LEU LEU A . n A 1 79 LYS 79 206 206 LYS LYS A . n A 1 80 ASP 80 207 207 ASP ASP A . n A 1 81 GLU 81 208 208 GLU GLU A . n A 1 82 VAL 82 209 209 VAL VAL A . n A 1 83 LEU 83 210 210 LEU LEU A . n A 1 84 SER 84 211 211 SER SER A . n A 1 85 PRO 85 212 212 PRO PRO A . n A 1 86 SER 86 213 213 SER SER A . n A 1 87 TRP 87 214 214 TRP TRP A . n A 1 88 ASP 88 215 215 ASP ASP A . n A 1 89 SER 89 216 216 SER SER A . n A 1 90 LEU 90 217 217 LEU LEU A . n A 1 91 PHE 91 218 218 PHE PHE A . n A 1 92 SER 92 219 219 SER SER A . n A 1 93 GLY 93 220 220 GLY GLY A . n A 1 94 SER 94 221 221 SER SER A . n A 1 95 GLN 95 222 222 GLN GLN A . n A 1 96 GLY 96 223 223 GLY GLY A . n A 1 97 GLN 97 224 224 GLN GLN A . n A 1 98 LEU 98 225 225 LEU LEU A . n A 1 99 GLN 99 226 226 GLN GLN A . n A 1 100 PRO 100 227 227 PRO PRO A . n A 1 101 GLY 101 228 228 GLY GLY A . n A 1 102 ALA 102 229 229 ALA ALA A . n A 1 103 ARG 103 230 230 ARG ARG A . n A 1 104 ILE 104 231 231 ILE ILE A . n A 1 105 PHE 105 232 232 PHE PHE A . n A 1 106 SER 106 233 233 SER SER A . n A 1 107 PHE 107 234 234 PHE PHE A . n A 1 108 ASP 108 235 235 ASP ASP A . n A 1 109 GLY 109 236 236 GLY GLY A . n A 1 110 ARG 110 237 237 ARG ARG A . n A 1 111 ASP 111 238 238 ASP ASP A . n A 1 112 VAL 112 239 239 VAL VAL A . n A 1 113 LEU 113 240 240 LEU LEU A . n A 1 114 ARG 114 241 241 ARG ARG A . n A 1 115 HIS 115 242 242 HIS HIS A . n A 1 116 PRO 116 243 243 PRO PRO A . n A 1 117 ALA 117 244 244 ALA ALA A . n A 1 118 TRP 118 245 245 TRP TRP A . n A 1 119 PRO 119 246 246 PRO PRO A . n A 1 120 GLN 120 247 247 GLN GLN A . n A 1 121 LYS 121 248 248 LYS LYS A . n A 1 122 SER 122 249 249 SER SER A . n A 1 123 VAL 123 250 250 VAL VAL A . n A 1 124 TRP 124 251 251 TRP TRP A . n A 1 125 HIS 125 252 252 HIS HIS A . n A 1 126 GLY 126 253 253 GLY GLY A . n A 1 127 SER 127 254 254 SER SER A . n A 1 128 ASP 128 255 255 ASP ASP A . n A 1 129 PRO 129 256 256 PRO PRO A . n A 1 130 SER 130 257 257 SER SER A . n A 1 131 GLY 131 258 258 GLY GLY A . n A 1 132 ARG 132 259 259 ARG ARG A . n A 1 133 ARG 133 260 260 ARG ARG A . n A 1 134 LEU 134 261 261 LEU LEU A . n A 1 135 MET 135 262 262 MET MET A . n A 1 136 GLU 136 263 263 GLU GLU A . n A 1 137 SER 137 264 264 SER SER A . n A 1 138 TYR 138 265 265 TYR TYR A . n A 1 139 CYS 139 266 266 CYS CYS A . n A 1 140 GLU 140 267 267 GLU GLU A . n A 1 141 THR 141 268 268 THR THR A . n A 1 142 TRP 142 269 269 TRP TRP A . n A 1 143 ARG 143 270 270 ARG ARG A . n A 1 144 THR 144 271 271 THR THR A . n A 1 145 GLU 145 272 272 GLU GLU A . n A 1 146 THR 146 273 273 THR THR A . n A 1 147 THR 147 274 274 THR THR A . n A 1 148 GLY 148 275 275 GLY GLY A . n A 1 149 ALA 149 276 276 ALA ALA A . n A 1 150 THR 150 277 277 THR THR A . n A 1 151 GLY 151 278 278 GLY GLY A . n A 1 152 GLN 152 279 279 GLN GLN A . n A 1 153 ALA 153 280 280 ALA ALA A . n A 1 154 SER 154 281 281 SER SER A . n A 1 155 SER 155 282 282 SER SER A . n A 1 156 LEU 156 283 283 LEU LEU A . n A 1 157 LEU 157 284 284 LEU LEU A . n A 1 158 SER 158 285 285 SER SER A . n A 1 159 GLY 159 286 286 GLY GLY A . n A 1 160 ARG 160 287 287 ARG ARG A . n A 1 161 LEU 161 288 288 LEU LEU A . n A 1 162 LEU 162 289 289 LEU LEU A . n A 1 163 GLU 163 290 290 GLU GLU A . n A 1 164 GLN 164 291 291 GLN GLN A . n A 1 165 LYS 165 292 292 LYS LYS A . n A 1 166 ALA 166 293 293 ALA ALA A . n A 1 167 ALA 167 294 294 ALA ALA A . n A 1 168 SER 168 295 295 SER SER A . n A 1 169 CYS 169 296 296 CYS CYS A . n A 1 170 HIS 170 297 297 HIS HIS A . n A 1 171 ASN 171 298 298 ASN ASN A . n A 1 172 SER 172 299 299 SER SER A . n A 1 173 TYR 173 300 300 TYR TYR A . n A 1 174 ILE 174 301 301 ILE ILE A . n A 1 175 VAL 175 302 302 VAL VAL A . n A 1 176 LEU 176 303 303 LEU LEU A . n A 1 177 CYS 177 304 304 CYS CYS A . n A 1 178 ILE 178 305 305 ILE ILE A . n A 1 179 GLU 179 306 306 GLU GLU A . n A 1 180 ASN 180 307 307 ASN ASN A . n A 1 181 SER 181 308 308 SER SER A . n A 1 182 PHE 182 309 309 PHE PHE A . n A 1 183 MET 183 310 310 MET MET A . n A 1 184 THR 184 311 ? ? ? A . n A 1 185 SER 185 312 ? ? ? A . n A 1 186 PHE 186 313 ? ? ? A . n A 1 187 SER 187 314 ? ? ? A . n A 1 188 LYS 188 315 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN 1 401 401 ZN ZN A . C 2 ZN 1 402 402 ZN ZN A . D 3 HOH 1 2001 2001 HOH HOH A . D 3 HOH 2 2002 2002 HOH HOH A . D 3 HOH 3 2003 2003 HOH HOH A . D 3 HOH 4 2004 2004 HOH HOH A . D 3 HOH 5 2005 2005 HOH HOH A . D 3 HOH 6 2006 2006 HOH HOH A . D 3 HOH 7 2007 2007 HOH HOH A . D 3 HOH 8 2008 2008 HOH HOH A . D 3 HOH 9 2009 2009 HOH HOH A . D 3 HOH 10 2010 2010 HOH HOH A . D 3 HOH 11 2011 2011 HOH HOH A . D 3 HOH 12 2012 2012 HOH HOH A . D 3 HOH 13 2013 2013 HOH HOH A . D 3 HOH 14 2014 2014 HOH HOH A . D 3 HOH 15 2015 2015 HOH HOH A . D 3 HOH 16 2016 2016 HOH HOH A . D 3 HOH 17 2017 2017 HOH HOH A . D 3 HOH 18 2018 2018 HOH HOH A . D 3 HOH 19 2019 2019 HOH HOH A . D 3 HOH 20 2020 2020 HOH HOH A . D 3 HOH 21 2021 2021 HOH HOH A . D 3 HOH 22 2022 2022 HOH HOH A . D 3 HOH 23 2023 2023 HOH HOH A . D 3 HOH 24 2024 2024 HOH HOH A . D 3 HOH 25 2025 2025 HOH HOH A . D 3 HOH 26 2026 2026 HOH HOH A . D 3 HOH 27 2027 2027 HOH HOH A . D 3 HOH 28 2028 2028 HOH HOH A . D 3 HOH 29 2029 2029 HOH HOH A . D 3 HOH 30 2030 2030 HOH HOH A . D 3 HOH 31 2031 2031 HOH HOH A . D 3 HOH 32 2032 2032 HOH HOH A . D 3 HOH 33 2033 2033 HOH HOH A . D 3 HOH 34 2034 2034 HOH HOH A . D 3 HOH 35 2035 2035 HOH HOH A . D 3 HOH 36 2036 2036 HOH HOH A . D 3 HOH 37 2037 2037 HOH HOH A . D 3 HOH 38 2038 2038 HOH HOH A . D 3 HOH 39 2039 2039 HOH HOH A . D 3 HOH 40 2040 2040 HOH HOH A . D 3 HOH 41 2041 2041 HOH HOH A . D 3 HOH 42 2042 2042 HOH HOH A . D 3 HOH 43 2043 2043 HOH HOH A . D 3 HOH 44 2044 2044 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 0 A ARG 158 ? CD ? A ARG 31 CD 2 1 Y 0 A ARG 158 ? NE ? A ARG 31 NE 3 1 Y 0 A ARG 158 ? CZ ? A ARG 31 CZ 4 1 Y 0 A ARG 158 ? NH1 ? A ARG 31 NH1 5 1 Y 0 A ARG 158 ? NH2 ? A ARG 31 NH2 6 1 Y 0 A ARG 184 ? NE ? A ARG 57 NE 7 1 Y 0 A ARG 184 ? CZ ? A ARG 57 CZ 8 1 Y 0 A ARG 184 ? NH1 ? A ARG 57 NH1 9 1 Y 0 A ARG 184 ? NH2 ? A ARG 57 NH2 10 1 Y 0 A ARG 194 ? NE ? A ARG 67 NE 11 1 Y 0 A ARG 194 ? CZ ? A ARG 67 CZ 12 1 Y 0 A ARG 194 ? NH1 ? A ARG 67 NH1 13 1 Y 0 A ARG 194 ? NH2 ? A ARG 67 NH2 14 1 Y 0 A LYS 206 ? CE ? A LYS 79 CE 15 1 Y 0 A LYS 206 ? NZ ? A LYS 79 NZ 16 1 Y 0 A ARG 259 ? CD ? A ARG 132 CD 17 1 Y 0 A ARG 259 ? NE ? A ARG 132 NE 18 1 Y 0 A ARG 259 ? CZ ? A ARG 132 CZ 19 1 Y 0 A ARG 259 ? NH1 ? A ARG 132 NH1 20 1 Y 0 A ARG 259 ? NH2 ? A ARG 132 NH2 21 1 Y 0 A LYS 292 ? CG ? A LYS 165 CG 22 1 Y 0 A LYS 292 ? CD ? A LYS 165 CD 23 1 Y 0 A LYS 292 ? CE ? A LYS 165 CE 24 1 Y 0 A LYS 292 ? NZ ? A LYS 165 NZ # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal _software.date _software.type _software.location _software.language X-PLOR refinement . ? 1 ? ? ? ? MOSFLM 'data reduction' . ? 2 ? ? ? ? SCALA 'data scaling' . ? 3 ? ? ? ? AMoRE phasing . ? 4 ? ? ? ? # _cell.entry_id 1DY0 _cell.length_a 62.810 _cell.length_b 62.810 _cell.length_c 88.070 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1DY0 _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 # _exptl.entry_id 1DY0 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.09 _exptl_crystal.density_percent_sol 41.22 _exptl_crystal.description ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.50 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details 'pH 8.50' # _diffrn.id 1 _diffrn.ambient_temp 293.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 1998-03-15 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'GRAPHITE(002)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'ELLIOTT GX-21' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list 1.5418 # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 1DY0 _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 15.000 _reflns.d_resolution_high 2.200 _reflns.number_obs 9450 _reflns.number_all ? _reflns.percent_possible_obs 99.8 _reflns.pdbx_Rmerge_I_obs 0.07900 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 8.100 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.20 _reflns_shell.d_res_low 2.32 _reflns_shell.percent_possible_all 99.9 _reflns_shell.Rmerge_I_obs 0.19700 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 1DY0 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 9412 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 8.00 _refine.ls_d_res_high 2.20 _refine.ls_percent_reflns_obs 99.9 _refine.ls_R_factor_obs 0.208 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.208 _refine.ls_R_factor_R_free 0.272 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.0 _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 1KOE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model 'INDIVIDUAL RESTRAINED' _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1400 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 2 _refine_hist.number_atoms_solvent 44 _refine_hist.number_atoms_total 1446 _refine_hist.d_res_high 2.20 _refine_hist.d_res_low 8.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.007 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 1.6 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _database_PDB_matrix.entry_id 1DY0 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1DY0 _struct.title 'Murine endostatin, crystal form II' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1DY0 _struct_keywords.pdbx_keywords 'ANGIOGENESIS INHIBITOR' _struct_keywords.text 'ANGIOGENESIS INHIBITOR' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code CA1H_MOUSE _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession P39061 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1DY0 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 188 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P39061 _struct_ref_seq.db_align_beg 1128 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 1315 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 128 _struct_ref_seq.pdbx_auth_seq_align_end 315 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1DY0 ALA A 1 ? UNP P39061 LEU 1128 'engineered mutation' 128 1 1 1DY0 PRO A 2 ? UNP P39061 SER 1129 'engineered mutation' 129 2 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details 'BIOLOGICAL_UNIT: MONOMER' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ARG A 28 ? ALA A 43 ? ARG A 155 ALA A 170 1 ? 16 HELX_P HELX_P2 2 ASP A 60 ? VAL A 65 ? ASP A 187 VAL A 192 5 ? 6 HELX_P HELX_P3 3 ARG A 66 ? ARG A 70 ? ARG A 193 ARG A 197 5 ? 5 HELX_P HELX_P4 4 SER A 86 ? PHE A 91 ? SER A 213 PHE A 218 1 ? 6 HELX_P HELX_P5 5 TYR A 138 ? ARG A 143 ? TYR A 265 ARG A 270 1 ? 6 HELX_P HELX_P6 6 LEU A 157 ? GLY A 159 ? LEU A 284 GLY A 286 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 37 SG ? ? ? 1_555 A CYS 177 SG ? ? A CYS 164 A CYS 304 1_555 ? ? ? ? ? ? ? 2.021 ? ? disulf2 disulf ? ? A CYS 139 SG ? ? ? 1_555 A CYS 169 SG ? ? A CYS 266 A CYS 296 1_555 ? ? ? ? ? ? ? 2.026 ? ? metalc1 metalc ? ? A HIS 5 ND1 ? ? ? 1_555 C ZN . ZN ? ? A HIS 132 A ZN 402 1_555 ? ? ? ? ? ? ? 2.229 ? ? metalc2 metalc ? ? A HIS 5 N ? ? ? 1_555 C ZN . ZN ? ? A HIS 132 A ZN 402 1_555 ? ? ? ? ? ? ? 2.507 ? ? metalc3 metalc ? ? A HIS 7 NE2 ? ? ? 1_555 B ZN . ZN ? ? A HIS 134 A ZN 401 1_555 ? ? ? ? ? ? ? 1.865 ? ? metalc4 metalc ? ? A ASP 9 OD2 ? ? ? 1_555 B ZN . ZN ? ? A ASP 136 A ZN 401 1_555 ? ? ? ? ? ? ? 1.966 ? ? metalc5 metalc ? ? A HIS 15 NE2 ? ? ? 1_555 B ZN . ZN ? ? A HIS 142 A ZN 401 1_555 ? ? ? ? ? ? ? 2.103 ? ? metalc6 metalc ? ? A ASP 80 OD1 ? ? ? 1_555 B ZN . ZN ? ? A ASP 207 A ZN 401 1_555 ? ? ? ? ? ? ? 1.805 ? ? metalc7 metalc ? ? A HIS 170 NE2 ? ? ? 4_464 C ZN . ZN ? ? A HIS 297 A ZN 402 1_555 ? ? ? ? ? ? ? 2.048 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 ND1 ? A HIS 5 ? A HIS 132 ? 1_555 ZN ? C ZN . ? A ZN 402 ? 1_555 N ? A HIS 5 ? A HIS 132 ? 1_555 95.1 ? 2 ND1 ? A HIS 5 ? A HIS 132 ? 1_555 ZN ? C ZN . ? A ZN 402 ? 1_555 NE2 ? A HIS 170 ? A HIS 297 ? 4_464 86.1 ? 3 N ? A HIS 5 ? A HIS 132 ? 1_555 ZN ? C ZN . ? A ZN 402 ? 1_555 NE2 ? A HIS 170 ? A HIS 297 ? 4_464 176.5 ? 4 NE2 ? A HIS 7 ? A HIS 134 ? 1_555 ZN ? B ZN . ? A ZN 401 ? 1_555 OD2 ? A ASP 9 ? A ASP 136 ? 1_555 112.7 ? 5 NE2 ? A HIS 7 ? A HIS 134 ? 1_555 ZN ? B ZN . ? A ZN 401 ? 1_555 NE2 ? A HIS 15 ? A HIS 142 ? 1_555 107.7 ? 6 OD2 ? A ASP 9 ? A ASP 136 ? 1_555 ZN ? B ZN . ? A ZN 401 ? 1_555 NE2 ? A HIS 15 ? A HIS 142 ? 1_555 112.1 ? 7 NE2 ? A HIS 7 ? A HIS 134 ? 1_555 ZN ? B ZN . ? A ZN 401 ? 1_555 OD1 ? A ASP 80 ? A ASP 207 ? 1_555 131.4 ? 8 OD2 ? A ASP 9 ? A ASP 136 ? 1_555 ZN ? B ZN . ? A ZN 401 ? 1_555 OD1 ? A ASP 80 ? A ASP 207 ? 1_555 98.5 ? 9 NE2 ? A HIS 15 ? A HIS 142 ? 1_555 ZN ? B ZN . ? A ZN 401 ? 1_555 OD1 ? A ASP 80 ? A ASP 207 ? 1_555 92.6 ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 CYS A 37 ? CYS A 177 ? CYS A 164 ? 1_555 CYS A 304 ? 1_555 SG SG . . . None 'Disulfide bridge' 2 CYS A 139 ? CYS A 169 ? CYS A 266 ? 1_555 CYS A 296 ? 1_555 SG SG . . . None 'Disulfide bridge' # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 PHE A 50 ? ALA A 52 ? PHE A 177 ALA A 179 A 2 LEU A 176 ? GLU A 179 ? LEU A 303 GLU A 306 A 3 LEU A 14 ? ALA A 18 ? LEU A 141 ALA A 145 A 4 ILE A 75 ? VAL A 76 ? ILE A 202 VAL A 203 A 5 VAL A 82 ? SER A 84 ? VAL A 209 SER A 211 B 1 SER A 122 ? TRP A 124 ? SER A 249 TRP A 251 B 2 THR A 150 ? SER A 155 ? THR A 277 SER A 282 B 3 LYS A 165 ? SER A 168 ? LYS A 292 SER A 295 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ARG A 51 ? N ARG A 178 O ILE A 178 ? O ILE A 305 A 2 3 N GLU A 179 ? N GLU A 306 O HIS A 15 ? O HIS A 142 A 3 4 N LEU A 16 ? N LEU A 143 O VAL A 76 ? O VAL A 203 A 4 5 O ILE A 75 ? O ILE A 202 N LEU A 83 ? N LEU A 210 B 1 2 N VAL A 123 ? N VAL A 250 O SER A 154 ? O SER A 281 B 2 3 N ALA A 153 ? N ALA A 280 O LYS A 165 ? O LYS A 292 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ZN 401 ? 4 'BINDING SITE FOR RESIDUE ZN A 401' AC2 Software A ZN 402 ? 3 'BINDING SITE FOR RESIDUE ZN A 402' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 HIS A 7 ? HIS A 134 . ? 1_555 ? 2 AC1 4 ASP A 9 ? ASP A 136 . ? 1_555 ? 3 AC1 4 HIS A 15 ? HIS A 142 . ? 1_555 ? 4 AC1 4 ASP A 80 ? ASP A 207 . ? 1_555 ? 5 AC2 3 ALA A 4 ? ALA A 131 . ? 1_555 ? 6 AC2 3 HIS A 5 ? HIS A 132 . ? 1_555 ? 7 AC2 3 HIS A 170 ? HIS A 297 . ? 1_555 ? # _pdbx_entry_details.entry_id 1DY0 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details 'N-TERMINAL APLA MUTATION' _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 HIS A 252 ? ? -145.60 -27.69 2 1 TYR A 265 ? ? -145.86 36.71 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ALA 128 ? A ALA 1 2 1 Y 1 A PRO 129 ? A PRO 2 3 1 Y 1 A LEU 130 ? A LEU 3 4 1 Y 1 A THR 311 ? A THR 184 5 1 Y 1 A SER 312 ? A SER 185 6 1 Y 1 A PHE 313 ? A PHE 186 7 1 Y 1 A SER 314 ? A SER 187 8 1 Y 1 A LYS 315 ? A LYS 188 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 SER N N N N 290 SER CA C N S 291 SER C C N N 292 SER O O N N 293 SER CB C N N 294 SER OG O N N 295 SER OXT O N N 296 SER H H N N 297 SER H2 H N N 298 SER HA H N N 299 SER HB2 H N N 300 SER HB3 H N N 301 SER HG H N N 302 SER HXT H N N 303 THR N N N N 304 THR CA C N S 305 THR C C N N 306 THR O O N N 307 THR CB C N R 308 THR OG1 O N N 309 THR CG2 C N N 310 THR OXT O N N 311 THR H H N N 312 THR H2 H N N 313 THR HA H N N 314 THR HB H N N 315 THR HG1 H N N 316 THR HG21 H N N 317 THR HG22 H N N 318 THR HG23 H N N 319 THR HXT H N N 320 TRP N N N N 321 TRP CA C N S 322 TRP C C N N 323 TRP O O N N 324 TRP CB C N N 325 TRP CG C Y N 326 TRP CD1 C Y N 327 TRP CD2 C Y N 328 TRP NE1 N Y N 329 TRP CE2 C Y N 330 TRP CE3 C Y N 331 TRP CZ2 C Y N 332 TRP CZ3 C Y N 333 TRP CH2 C Y N 334 TRP OXT O N N 335 TRP H H N N 336 TRP H2 H N N 337 TRP HA H N N 338 TRP HB2 H N N 339 TRP HB3 H N N 340 TRP HD1 H N N 341 TRP HE1 H N N 342 TRP HE3 H N N 343 TRP HZ2 H N N 344 TRP HZ3 H N N 345 TRP HH2 H N N 346 TRP HXT H N N 347 TYR N N N N 348 TYR CA C N S 349 TYR C C N N 350 TYR O O N N 351 TYR CB C N N 352 TYR CG C Y N 353 TYR CD1 C Y N 354 TYR CD2 C Y N 355 TYR CE1 C Y N 356 TYR CE2 C Y N 357 TYR CZ C Y N 358 TYR OH O N N 359 TYR OXT O N N 360 TYR H H N N 361 TYR H2 H N N 362 TYR HA H N N 363 TYR HB2 H N N 364 TYR HB3 H N N 365 TYR HD1 H N N 366 TYR HD2 H N N 367 TYR HE1 H N N 368 TYR HE2 H N N 369 TYR HH H N N 370 TYR HXT H N N 371 VAL N N N N 372 VAL CA C N S 373 VAL C C N N 374 VAL O O N N 375 VAL CB C N N 376 VAL CG1 C N N 377 VAL CG2 C N N 378 VAL OXT O N N 379 VAL H H N N 380 VAL H2 H N N 381 VAL HA H N N 382 VAL HB H N N 383 VAL HG11 H N N 384 VAL HG12 H N N 385 VAL HG13 H N N 386 VAL HG21 H N N 387 VAL HG22 H N N 388 VAL HG23 H N N 389 VAL HXT H N N 390 ZN ZN ZN N N 391 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 TRP N CA sing N N 306 TRP N H sing N N 307 TRP N H2 sing N N 308 TRP CA C sing N N 309 TRP CA CB sing N N 310 TRP CA HA sing N N 311 TRP C O doub N N 312 TRP C OXT sing N N 313 TRP CB CG sing N N 314 TRP CB HB2 sing N N 315 TRP CB HB3 sing N N 316 TRP CG CD1 doub Y N 317 TRP CG CD2 sing Y N 318 TRP CD1 NE1 sing Y N 319 TRP CD1 HD1 sing N N 320 TRP CD2 CE2 doub Y N 321 TRP CD2 CE3 sing Y N 322 TRP NE1 CE2 sing Y N 323 TRP NE1 HE1 sing N N 324 TRP CE2 CZ2 sing Y N 325 TRP CE3 CZ3 doub Y N 326 TRP CE3 HE3 sing N N 327 TRP CZ2 CH2 doub Y N 328 TRP CZ2 HZ2 sing N N 329 TRP CZ3 CH2 sing Y N 330 TRP CZ3 HZ3 sing N N 331 TRP CH2 HH2 sing N N 332 TRP OXT HXT sing N N 333 TYR N CA sing N N 334 TYR N H sing N N 335 TYR N H2 sing N N 336 TYR CA C sing N N 337 TYR CA CB sing N N 338 TYR CA HA sing N N 339 TYR C O doub N N 340 TYR C OXT sing N N 341 TYR CB CG sing N N 342 TYR CB HB2 sing N N 343 TYR CB HB3 sing N N 344 TYR CG CD1 doub Y N 345 TYR CG CD2 sing Y N 346 TYR CD1 CE1 sing Y N 347 TYR CD1 HD1 sing N N 348 TYR CD2 CE2 doub Y N 349 TYR CD2 HD2 sing N N 350 TYR CE1 CZ doub Y N 351 TYR CE1 HE1 sing N N 352 TYR CE2 CZ sing Y N 353 TYR CE2 HE2 sing N N 354 TYR CZ OH sing N N 355 TYR OH HH sing N N 356 TYR OXT HXT sing N N 357 VAL N CA sing N N 358 VAL N H sing N N 359 VAL N H2 sing N N 360 VAL CA C sing N N 361 VAL CA CB sing N N 362 VAL CA HA sing N N 363 VAL C O doub N N 364 VAL C OXT sing N N 365 VAL CB CG1 sing N N 366 VAL CB CG2 sing N N 367 VAL CB HB sing N N 368 VAL CG1 HG11 sing N N 369 VAL CG1 HG12 sing N N 370 VAL CG1 HG13 sing N N 371 VAL CG2 HG21 sing N N 372 VAL CG2 HG22 sing N N 373 VAL CG2 HG23 sing N N 374 VAL OXT HXT sing N N 375 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1KOE _pdbx_initial_refinement_model.details 'PDB ENTRY 1KOE' # _atom_sites.entry_id 1DY0 _atom_sites.fract_transf_matrix[1][1] 0.015921 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015921 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011355 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S ZN # loop_