HEADER HYDROGENASE 13-MAR-00 1E08 TITLE STRUCTURAL MODEL OF THE [FE]-HYDROGENASE/CYTOCHROME C553 COMPLEX TITLE 2 COMBINING NMR AND SOFT-DOCKING CAVEAT 1E08 MET A 54 HAS WRONG CHIRALITY AT ATOM CA ILE A 60 HAS WRONG CAVEAT 2 1E08 CHIRALITY AT ATOM CB CYS A 142 HAS WRONG CHIRALITY AT ATOM CAVEAT 3 1E08 CA THR A 148 HAS WRONG CHIRALITY AT ATOM CB PRO A 195 HAS CAVEAT 4 1E08 WRONG CHIRALITY AT ATOM CA MET A 206 HAS WRONG CHIRALITY AT CAVEAT 5 1E08 ATOM CA PRO A 319 HAS WRONG CHIRALITY AT ATOM CA LEU D 71 CAVEAT 6 1E08 HAS WRONG CHIRALITY AT ATOM CA HIS D 91 HAS WRONG CHIRALITY CAVEAT 7 1E08 AT ATOM CA SER E 9 HAS WRONG CHIRALITY AT ATOM CA THERE ARE CAVEAT 8 1E08 CHIRALITY ERRORS IN C-ALPHA CENTERS COMPND MOL_ID: 1; COMPND 2 MOLECULE: [FE]-HYDROGENASE (LARGE SUBUNIT); COMPND 3 CHAIN: A; COMPND 4 MOL_ID: 2; COMPND 5 MOLECULE: [FE]-HYDROGENASE (SMALL SUBUNIT); COMPND 6 CHAIN: D; COMPND 7 MOL_ID: 3; COMPND 8 MOLECULE: CYTOCHROME C553; COMPND 9 CHAIN: E SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DESULFOVIBRIO DESULFURICANS; SOURCE 3 ORGANISM_TAXID: 876; SOURCE 4 ATCC: 7757; SOURCE 5 CELLULAR_LOCATION: PERIPLASM; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: DESULFOVIBRIO DESULFURICANS; SOURCE 8 ORGANISM_TAXID: 876; SOURCE 9 ATCC: 7757; SOURCE 10 CELLULAR_LOCATION: PERIPLASM; SOURCE 11 MOL_ID: 3; SOURCE 12 ORGANISM_SCIENTIFIC: DESULFOVIBRIO VULGARIS; SOURCE 13 ORGANISM_TAXID: 882; SOURCE 14 STRAIN: HILDENBOROUGH; SOURCE 15 CELLULAR_LOCATION: PERIPLASM KEYWDS HYDROGENASE, CYTOCHROME C553, ELECTRON TRANSFER COMPLEX EXPDTA SOLUTION NMR; THEORETICAL MODEL MDLTYP MINIMIZED AVERAGE AUTHOR X.MORELLI,M.CZJZEK,C.E.HATCHIKIAN,O.BORNET,J.C.FONTECILLA-CAMPS, AUTHOR 2 N.P.PALMA,J.J.G.MOURA,F.GUERLESQUIN REVDAT 7 27-NOV-19 1E08 1 REMARK LINK REVDAT 6 25-SEP-19 1E08 1 CAVEAT COMPND HET HETNAM REVDAT 6 2 1 HETSYN FORMUL LINK ATOM REVDAT 5 21-AUG-19 1E08 1 REMARK LINK REVDAT 4 24-FEB-09 1E08 1 VERSN REVDAT 3 01-AUG-03 1E08 1 DBREF SEQRES LINK REVDAT 2 31-AUG-00 1E08 1 FORMUL REVDAT 1 25-AUG-00 1E08 0 JRNL AUTH X.MORELLI,M.CZJZEK,C.E.HATCHIKIAN,O.BORNET, JRNL AUTH 2 J.C.FONTECILLA-CAMPS,N.P.PALMA,J.J.MOURA,F.GUERLESQUIN JRNL TITL STRUCTURAL MODEL OF THE FE-HYDROGENASE/CYTOCHROME C553 JRNL TITL 2 COMPLEX COMBINING TRANSVERSE RELAXATION-OPTIMIZED JRNL TITL 3 SPECTROSCOPY EXPERIMENTS AND SOFT DOCKING CALCULATIONS. JRNL REF J.BIOL.CHEM. V. 275 23204 2000 JRNL REFN ISSN 0021-9258 JRNL PMID 10748163 JRNL DOI 10.1074/JBC.M909835199 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH X.MORELLI,A.DOLLA,M.CZJZEK,P.N.PALMA,F.BLASCO,L.KRIPPAHL, REMARK 1 AUTH 2 J.J.G.MOURA REMARK 1 TITL HETERONUCLEAR NMR AND SOFT DOCKING: AN EXPERIMENTAL APPROACH REMARK 1 TITL 2 FOR A STRUCTURAL MODEL OF THE CYTOCHROME C553-FERREDOXIN REMARK 1 TITL 3 COMPLEX REMARK 1 REF BIOCHEMISTRY V. 39 2530 2000 REMARK 1 REFN ISSN 0006-2960 REMARK 1 PMID 10704202 REMARK 1 DOI 10.1021/BI992306S REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.843 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE DEPOSITED STRUCTURE IS THE RESULT REMARK 3 OF A HETERONUCLEAR NMR EXPERIMENT AND DOCKING SIMULATIONS. THE REMARK 3 FINAL RESULT WAS MINIMIZED BY MOLECULAR DYNAMIC MINIMIZATION. REMARK 4 REMARK 4 1E08 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 13-MAR-00. REMARK 100 THE DEPOSITION ID IS D_1290004651. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 296 REMARK 210 PH : 7.6 REMARK 210 IONIC STRENGTH : 10MM TRIS/HCL REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 10% D2O/90% WATER REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : TROSY REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ REMARK 210 SPECTROMETER MODEL : DRX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : UXNMR UXNMR REMARK 210 METHOD USED : NULL REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 1000 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 1 REMARK 210 CONFORMERS, SELECTION CRITERIA : LEAST SHIFT VARIATION VIOLATION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: COMBINED DOCKING AND NMR FILTERING SOLUTION. THE TROSY REMARK 210 EXPERIMENT WAS PERFORMED ON THE 15N-LABELED CYTOCHROME WITH REMARK 210 SUBSEQUENTLY ADDING OF THE HYDROGENASE. THE RESIDUES HAVING THE REMARK 210 STRONGEST SHIFTS WERE USED TO FILTER THE DOCKING SOLUTIONS.THE REMARK 210 AMINO-ACIDS ALA E5, CYS E10, HIS E14, GLY E15, ALA E16, ALA E22, REMARK 210 GLY E24, VAL E29, GLN E32, LYS E54, ASN E59, ALA E60 OF THE REMARK 210 CYTOCHROME C553 SHOW STRONGEST SHIFTS IN THE TROSY EXPERIMENTS. REMARK 210 EACH TIME ONE OF THE AMINO ACIDS IS IN CONTACT (LESS THAN 5A IN REMARK 210 THE COMPLEX) WITH ITS PARTNER ONE POINT IS ATTRIBUTED TO THE REMARK 210 STRUCTURE. THEN THE ONE THOUSAND BEST STRUCTURES ARE RANKED REMARK 210 ACCORDING TO THIS CRITERIUM AND THE 10 BEST SOLUTIONS ARE REMARK 210 MINIMISED. A COMPARISON OF THESE SOLUTIONS GENERATES STRUCTURE REMARK 210 WITH 5 IDENTICAL SOLUTIONS REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 220 REMARK 220 EXPERIMENTAL DETAILS REMARK 220 EXPERIMENT TYPE : THEORETICAL MODELLING REMARK 220 REMARK 220 REMARK: THIS THEORETICAL MODEL ENTRY WAS NOT ANNOTATED AND NOT REMARK 220 VALIDATED BY THE WWPDB STAFF AND THEREFORE MAY NOT CONFORM REMARK 220 TO THE PDB FORMAT. REMARK 225 REMARK 225 THEORETICAL MODEL REMARK 225 THE COORDINATES IN THIS ENTRY REPRESENT A MODEL STRUCTURE. REMARK 225 PROTEIN DATA BANK CONVENTIONS REQUIRE THAT CRYST1 AND REMARK 225 SCALE RECORDS BE INCLUDED, BUT THE VALUES ON THESE REMARK 225 RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 FE FE2 A 5 FE FE2 A 6 0.81 REMARK 500 O LYS D 73 CG GLU D 77 1.18 REMARK 500 FE FE2 A 5 O HOH A 11 1.27 REMARK 500 FE FE2 A 6 O HOH A 11 1.31 REMARK 500 FE FE2 A 6 C CYN A 7 1.41 REMARK 500 FE FE2 A 5 C CMO A 10 1.42 REMARK 500 FE FE2 A 6 C CMO A 9 1.43 REMARK 500 O GLU D 123 HG SER E 19 1.47 REMARK 500 O ALA A 397 H2 ASP E 2 1.48 REMARK 500 C ILE A 63 H GLU A 64 1.48 REMARK 500 H ALA A 109 S1 PDT A 4 1.49 REMARK 500 O THR A 145 H2 HOH A 11 1.49 REMARK 500 O ALA A 293 H1 HOH A 11 1.49 REMARK 500 FE FE2 A 5 C CYN A 8 1.52 REMARK 500 C GLN A 71 H CYS A 72 1.54 REMARK 500 O ASP A 31 H ALA A 33 1.55 REMARK 500 O PRO A 173 HD1 HIS A 196 1.56 REMARK 500 CA GLN A 29 H ILE A 30 1.57 REMARK 500 OXT ALA A 397 H ALA E 4 1.59 REMARK 500 O HIS D 85 ZN ZN D 12 1.61 REMARK 500 CA GLN A 29 N ILE A 30 1.61 REMARK 500 O PHE A 27 N VAL A 28 1.63 REMARK 500 O HIS D 82 ZN ZN D 12 1.64 REMARK 500 NE2 HIS D 82 ZN ZN D 12 1.64 REMARK 500 O LYS D 73 CD GLU D 77 1.75 REMARK 500 O GLN A 29 N ILE A 30 1.76 REMARK 500 OE1 GLN A 71 O CYS A 384 1.89 REMARK 500 OG1 THR A 40 CA GLY E 12 2.05 REMARK 500 FE FE2 A 5 C CYN A 7 2.06 REMARK 500 S2 PDT A 4 C CYN A 8 2.12 REMARK 500 OG1 THR A 40 N GLY E 12 2.13 REMARK 500 FE FE2 A 6 C CMO A 10 2.14 REMARK 500 FE FE2 A 5 C CMO A 9 2.14 REMARK 500 NZ LYS E 42 OD1 ASP E 66 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 PHE A 27 C VAL A 28 N -0.324 REMARK 500 GLN A 29 C ILE A 30 N 0.205 REMARK 500 GLU A 64 C ALA A 65 N 0.207 REMARK 500 ALA A 65 N ALA A 65 CA 0.201 REMARK 500 ALA A 65 C CYS A 66 N -0.330 REMARK 500 GLN A 71 C CYS A 72 N -0.184 REMARK 500 SER A 202 C PRO A 203 N -0.161 REMARK 500 PRO A 203 CD PRO A 203 N -0.147 REMARK 500 VAL A 347 N VAL A 347 CA -0.131 REMARK 500 GLU D 77 C LYS D 78 N -0.391 REMARK 500 VAL D 99 N VAL D 99 CA -0.145 REMARK 500 PRO D 109 CD PRO D 109 N -0.143 REMARK 500 PRO D 109 C PRO D 109 O 0.131 REMARK 500 TYR E 64 C SER E 65 N -0.142 REMARK 500 GLU E 67 N GLU E 67 CA 0.126 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PHE A 27 CA - C - N ANGL. DEV. = 24.3 DEGREES REMARK 500 PHE A 27 O - C - N ANGL. DEV. = -25.6 DEGREES REMARK 500 VAL A 28 C - N - CA ANGL. DEV. = 26.5 DEGREES REMARK 500 VAL A 28 CA - C - N ANGL. DEV. = -22.8 DEGREES REMARK 500 VAL A 28 O - C - N ANGL. DEV. = 23.1 DEGREES REMARK 500 GLN A 29 C - N - CA ANGL. DEV. = 18.9 DEGREES REMARK 500 GLN A 29 CA - C - N ANGL. DEV. = -53.3 DEGREES REMARK 500 GLN A 29 O - C - N ANGL. DEV. = -45.1 DEGREES REMARK 500 ILE A 63 CA - C - N ANGL. DEV. = -22.6 DEGREES REMARK 500 ILE A 63 O - C - N ANGL. DEV. = 26.7 DEGREES REMARK 500 GLU A 64 C - N - CA ANGL. DEV. = 19.6 DEGREES REMARK 500 GLU A 64 N - CA - CB ANGL. DEV. = 12.2 DEGREES REMARK 500 GLU A 64 CA - C - N ANGL. DEV. = -15.2 DEGREES REMARK 500 GLU A 64 O - C - N ANGL. DEV. = 24.1 DEGREES REMARK 500 ALA A 65 C - N - CA ANGL. DEV. = 17.7 DEGREES REMARK 500 ALA A 65 O - C - N ANGL. DEV. = 13.3 DEGREES REMARK 500 GLN A 71 O - C - N ANGL. DEV. = -21.6 DEGREES REMARK 500 TRP A 87 CA - CB - CG ANGL. DEV. = 12.1 DEGREES REMARK 500 PRO A 108 C - N - CA ANGL. DEV. = 9.4 DEGREES REMARK 500 SER A 202 O - C - N ANGL. DEV. = -17.7 DEGREES REMARK 500 PRO A 203 CA - C - N ANGL. DEV. = 16.2 DEGREES REMARK 500 ASP A 255 CA - C - N ANGL. DEV. = 14.0 DEGREES REMARK 500 ASP A 255 O - C - N ANGL. DEV. = -13.3 DEGREES REMARK 500 ILE A 295 CB - CA - C ANGL. DEV. = -29.5 DEGREES REMARK 500 LYS A 346 CA - C - N ANGL. DEV. = -20.3 DEGREES REMARK 500 LYS A 346 O - C - N ANGL. DEV. = 23.1 DEGREES REMARK 500 ALA A 397 N - CA - C ANGL. DEV. = -18.9 DEGREES REMARK 500 ILE D 39 N - CA - CB ANGL. DEV. = 17.2 DEGREES REMARK 500 ILE D 39 CA - CB - CG1 ANGL. DEV. = 20.8 DEGREES REMARK 500 GLY D 81 O - C - N ANGL. DEV. = -12.3 DEGREES REMARK 500 GLY D 98 CA - C - N ANGL. DEV. = -13.7 DEGREES REMARK 500 GLY D 98 O - C - N ANGL. DEV. = 15.1 DEGREES REMARK 500 VAL D 99 CA - CB - CG1 ANGL. DEV. = 9.2 DEGREES REMARK 500 LYS D 107 CA - C - N ANGL. DEV. = -13.8 DEGREES REMARK 500 LYS D 107 O - C - N ANGL. DEV. = 13.9 DEGREES REMARK 500 LEU D 108 C - N - CA ANGL. DEV. = 19.9 DEGREES REMARK 500 LEU D 108 CA - CB - CG ANGL. DEV. = -16.1 DEGREES REMARK 500 LEU D 108 N - CA - C ANGL. DEV. = 24.6 DEGREES REMARK 500 LEU D 108 CA - C - N ANGL. DEV. = 24.7 DEGREES REMARK 500 LEU D 108 O - C - N ANGL. DEV. = -22.4 DEGREES REMARK 500 PRO D 109 CA - C - N ANGL. DEV. = -16.2 DEGREES REMARK 500 PRO D 109 O - C - N ANGL. DEV. = 13.2 DEGREES REMARK 500 GLY D 118 C - N - CA ANGL. DEV. = -15.9 DEGREES REMARK 500 PRO D 119 O - C - N ANGL. DEV. = 19.3 DEGREES REMARK 500 TYR D 120 CA - C - N ANGL. DEV. = -25.3 DEGREES REMARK 500 TYR D 120 O - C - N ANGL. DEV. = 23.3 DEGREES REMARK 500 GLU D 123 N - CA - C ANGL. DEV. = -17.4 DEGREES REMARK 500 LEU E 79 N - CA - C ANGL. DEV. = -17.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 29 171.03 -39.45 REMARK 500 ALA A 33 -24.43 -146.47 REMARK 500 LYS A 34 64.25 -111.04 REMARK 500 ILE A 36 37.29 -92.57 REMARK 500 CYS A 38 -53.89 86.41 REMARK 500 ASP A 39 -163.45 63.24 REMARK 500 MET A 54 94.58 -48.62 REMARK 500 GLU A 56 -159.43 -128.20 REMARK 500 GLU A 64 -67.83 163.23 REMARK 500 ALA A 65 -24.07 -33.49 REMARK 500 GLN A 71 -30.17 51.66 REMARK 500 ALA A 84 -106.92 48.47 REMARK 500 TRP A 87 37.97 -83.99 REMARK 500 CYS A 142 -156.57 117.75 REMARK 500 THR A 145 32.00 -70.52 REMARK 500 ASP A 169 52.60 -94.69 REMARK 500 PRO A 195 -83.10 33.83 REMARK 500 SER A 198 109.34 -48.08 REMARK 500 CYS A 200 94.51 -67.90 REMARK 500 SER A 202 137.98 -23.72 REMARK 500 PRO A 203 -30.06 -26.57 REMARK 500 LEU A 210 -67.17 -95.04 REMARK 500 THR A 228 100.53 -54.55 REMARK 500 ILE A 254 -70.35 -10.11 REMARK 500 ASP A 255 -95.46 61.39 REMARK 500 ASP A 279 159.86 176.82 REMARK 500 ASP A 283 76.81 -107.08 REMARK 500 SER A 284 35.97 -68.29 REMARK 500 ALA A 293 15.78 -166.55 REMARK 500 ILE A 295 -15.07 -164.03 REMARK 500 GLU A 312 51.04 -106.51 REMARK 500 ALA A 313 -56.02 -157.78 REMARK 500 VAL A 314 -62.61 -100.82 REMARK 500 THR A 315 47.52 -84.64 REMARK 500 LYS A 317 51.13 -92.62 REMARK 500 LYS A 318 98.82 -59.57 REMARK 500 PHE A 324 41.72 -90.93 REMARK 500 ARG A 328 59.64 -118.44 REMARK 500 VAL A 340 59.68 -119.02 REMARK 500 PRO A 369 33.29 -86.55 REMARK 500 PRO A 379 89.39 -56.74 REMARK 500 LEU A 395 -67.60 -122.06 REMARK 500 SER D 74 36.62 -93.36 REMARK 500 TYR D 75 -59.96 -162.70 REMARK 500 GLU D 77 6.39 56.17 REMARK 500 LEU D 80 5.72 56.68 REMARK 500 LYS D 83 -75.47 -57.33 REMARK 500 HIS D 85 82.32 -65.22 REMARK 500 ASP D 86 -48.85 -155.96 REMARK 500 LEU D 88 -62.06 -168.64 REMARK 500 REMARK 500 THIS ENTRY HAS 58 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 PHE A 27 VAL A 28 -46.39 REMARK 500 CYS A 76 PRO A 77 -123.66 REMARK 500 ALA A 80 ILE A 81 141.69 REMARK 500 ALA A 84 GLN A 85 149.92 REMARK 500 GLY A 123 SER A 124 142.42 REMARK 500 TRP A 143 ASP A 144 -149.91 REMARK 500 LEU A 194 PRO A 195 121.92 REMARK 500 SER A 198 THR A 199 -142.64 REMARK 500 PRO A 233 CYS A 234 -148.99 REMARK 500 GLY A 300 GLY A 301 144.51 REMARK 500 VAL A 314 THR A 315 -143.89 REMARK 500 VAL A 394 LEU A 395 147.10 REMARK 500 VAL D 36 LYS D 37 144.29 REMARK 500 GLU D 77 LYS D 78 144.34 REMARK 500 GLY D 81 HIS D 82 -131.43 REMARK 500 HIS D 89 THR D 90 148.61 REMARK 500 THR D 90 HIS D 91 -132.91 REMARK 500 LEU D 108 PRO D 109 115.56 REMARK 500 ALA E 22 MET E 23 -140.15 REMARK 500 LYS E 78 LEU E 79 -79.80 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR A 112 0.12 SIDE CHAIN REMARK 500 TYR A 189 0.12 SIDE CHAIN REMARK 500 TYR A 214 0.07 SIDE CHAIN REMARK 500 TYR A 311 0.12 SIDE CHAIN REMARK 500 PHE A 356 0.09 SIDE CHAIN REMARK 500 TYR A 375 0.11 SIDE CHAIN REMARK 500 TYR D 51 0.10 SIDE CHAIN REMARK 500 HIS D 82 0.24 SIDE CHAIN REMARK 500 TYR E 7 0.19 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 PHE A 27 -15.17 REMARK 500 GLN A 29 -31.36 REMARK 500 CYS A 41 -20.89 REMARK 500 ASP A 255 13.32 REMARK 500 ALA A 348 17.08 REMARK 500 GLY D 81 16.60 REMARK 500 LEU D 108 21.81 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 1 FE3 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 35 SG REMARK 620 2 SF4 A 1 S1 105.1 REMARK 620 3 SF4 A 1 S2 108.0 108.7 REMARK 620 4 SF4 A 1 S4 114.4 109.9 110.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 1 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 38 SG REMARK 620 2 SF4 A 1 S1 112.2 REMARK 620 3 SF4 A 1 S3 106.4 108.9 REMARK 620 4 SF4 A 1 S4 111.1 109.1 109.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 1 FE4 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 41 SG REMARK 620 2 SF4 A 1 S1 104.5 REMARK 620 3 SF4 A 1 S2 116.6 108.6 REMARK 620 4 SF4 A 1 S3 110.3 109.5 107.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 2 FE4 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 45 SG REMARK 620 2 SF4 A 2 S1 110.5 REMARK 620 3 SF4 A 2 S2 112.0 109.8 REMARK 620 4 SF4 A 2 S3 108.9 109.5 106.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 2 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 66 SG REMARK 620 2 SF4 A 2 S1 107.3 REMARK 620 3 SF4 A 2 S3 112.4 110.6 REMARK 620 4 SF4 A 2 S4 106.7 107.9 111.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 2 FE3 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 69 SG REMARK 620 2 SF4 A 2 S1 112.2 REMARK 620 3 SF4 A 2 S2 110.9 109.8 REMARK 620 4 SF4 A 2 S4 109.3 106.7 107.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 2 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 72 SG REMARK 620 2 SF4 A 2 S2 101.4 REMARK 620 3 SF4 A 2 S3 113.7 106.1 REMARK 620 4 SF4 A 2 S4 116.4 107.8 110.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 1 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 76 SG REMARK 620 2 SF4 A 1 S2 114.9 REMARK 620 3 SF4 A 1 S3 106.7 106.5 REMARK 620 4 SF4 A 1 S4 109.7 110.0 108.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 3 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 179 SG REMARK 620 2 SF4 A 3 S1 115.9 REMARK 620 3 SF4 A 3 S3 113.9 111.3 REMARK 620 4 SF4 A 3 S4 101.6 106.1 106.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 3 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 234 SG REMARK 620 2 SF4 A 3 S2 110.7 REMARK 620 3 SF4 A 3 S3 110.5 106.1 REMARK 620 4 SF4 A 3 S4 109.6 113.9 105.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 3 FE3 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 378 SG REMARK 620 2 SF4 A 3 S1 105.9 REMARK 620 3 SF4 A 3 S2 112.7 105.2 REMARK 620 4 SF4 A 3 S4 113.4 105.0 113.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 3 FE4 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 382 SG REMARK 620 2 SF4 A 3 S1 107.7 REMARK 620 3 SF4 A 3 S2 110.9 106.4 REMARK 620 4 SF4 A 3 S3 113.4 111.4 107.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC E 80 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS E 14 NE2 REMARK 620 2 HEC E 80 NA 89.0 REMARK 620 3 HEC E 80 NB 86.9 90.8 REMARK 620 4 HEC E 80 NC 93.2 177.8 89.8 REMARK 620 5 HEC E 80 ND 95.5 90.3 177.3 89.0 REMARK 620 6 MET E 57 SD 170.7 89.9 83.8 88.0 93.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE2 A 6 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PDT A 4 S1 REMARK 620 2 PDT A 4 S2 29.1 REMARK 620 3 CYN A 7 N 106.3 87.7 REMARK 620 4 CMO A 9 O 84.5 97.3 66.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE2 A 5 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PDT A 4 S1 REMARK 620 2 PDT A 4 S2 31.4 REMARK 620 3 CYN A 8 N 57.0 72.0 REMARK 620 4 CMO A 10 O 101.6 80.1 74.8 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FE2 A 5 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FE2 A 6 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN D 12 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CYN A 7 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CYN A 8 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SF4 A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SF4 A 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SF4 A 3 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PDT A 4 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CMO A 9 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CMO A 10 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM E 80 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1HFE RELATED DB: PDB REMARK 900 HYDROGENASE 1.6 A RESOLUTION STRUCTURE OF THE FE-ONLY HYDROGENASE REMARK 900 FROM DESULFOVIBRIO DESULFURICANS REMARK 900 RELATED ID: 1DVH RELATED DB: PDB REMARK 900 CYTOCHROME C553 (REDUCED) (NMR, 36 STRUCTURES) REMARK 999 REMARK 999 SEQUENCE REMARK 999 N-TERMINAL END C-TERMINAL RESIDUES WERE NOT DEPOSITED IN REMARK 999 THE INITIAL PDB ENTRY 1HFE REMARK 999 TER REMARK 999 ALA: THE C-TERMINAL RESIDUES 398-421 ARE NOT PRESENT IN THE REMARK 999 PDB FILE OF HYDROGENASE 1HFE DBREF 1E08 A 27 397 PDB 1E08 1E08 27 397 DBREF 1E08 D 36 123 PDB 1E08 1E08 36 123 DBREF 1E08 E 2 79 PDB 1E08 1E08 2 79 SEQRES 1 A 371 PHE VAL GLN ILE ASP GLU ALA LYS CYS ILE GLY CYS ASP SEQRES 2 A 371 THR CYS SER GLN TYR CYS PRO THR ALA ALA ILE PHE GLY SEQRES 3 A 371 GLU MET GLY GLU PRO HIS SER ILE PRO HIS ILE GLU ALA SEQRES 4 A 371 CYS ILE ASN CYS GLY GLN CYS LEU THR HIS CYS PRO GLU SEQRES 5 A 371 ASN ALA ILE TYR GLU ALA GLN SER TRP VAL PRO GLU VAL SEQRES 6 A 371 GLU LYS LYS LEU LYS ASP GLY LYS VAL LYS CYS ILE ALA SEQRES 7 A 371 MET PRO ALA PRO ALA VAL ARG TYR ALA LEU GLY ASP ALA SEQRES 8 A 371 PHE GLY MET PRO VAL GLY SER VAL THR THR GLY LYS MET SEQRES 9 A 371 LEU ALA ALA LEU GLN LYS LEU GLY PHE ALA HIS CYS TRP SEQRES 10 A 371 ASP THR GLU PHE THR ALA ASP VAL THR ILE TRP GLU GLU SEQRES 11 A 371 GLY SER GLU PHE VAL GLU ARG LEU THR LYS LYS SER ASP SEQRES 12 A 371 MET PRO LEU PRO GLN PHE THR SER CYS CYS PRO GLY TRP SEQRES 13 A 371 GLN LYS TYR ALA GLU THR TYR TYR PRO GLU LEU LEU PRO SEQRES 14 A 371 HIS PHE SER THR CYS LYS SER PRO ILE GLY MET ASN GLY SEQRES 15 A 371 ALA LEU ALA LYS THR TYR GLY ALA GLU ARG MET LYS TYR SEQRES 16 A 371 ASP PRO LYS GLN VAL TYR THR VAL SER ILE MET PRO CYS SEQRES 17 A 371 ILE ALA LYS LYS TYR GLU GLY LEU ARG PRO GLU LEU LYS SEQRES 18 A 371 SER SER GLY MET ARG ASP ILE ASP ALA THR LEU THR THR SEQRES 19 A 371 ARG GLU LEU ALA TYR MET ILE LYS LYS ALA GLY ILE ASP SEQRES 20 A 371 PHE ALA LYS LEU PRO ASP GLY LYS ARG ASP SER LEU MET SEQRES 21 A 371 GLY GLU SER THR GLY GLY ALA THR ILE PHE GLY VAL THR SEQRES 22 A 371 GLY GLY VAL MET GLU ALA ALA LEU ARG PHE ALA TYR GLU SEQRES 23 A 371 ALA VAL THR GLY LYS LYS PRO ASP SER TRP ASP PHE LYS SEQRES 24 A 371 ALA VAL ARG GLY LEU ASP GLY ILE LYS GLU ALA THR VAL SEQRES 25 A 371 ASN VAL GLY GLY THR ASP VAL LYS VAL ALA VAL VAL HIS SEQRES 26 A 371 GLY ALA LYS ARG PHE LYS GLN VAL CYS ASP ASP VAL LYS SEQRES 27 A 371 ALA GLY LYS SER PRO TYR HIS PHE ILE GLU TYR MET ALA SEQRES 28 A 371 CYS PRO GLY GLY CYS VAL CYS GLY GLY GLY GLN PRO VAL SEQRES 29 A 371 MET PRO GLY VAL LEU GLU ALA SEQRES 1 D 88 VAL LYS GLN ILE LYS ASP TYR MET LEU ASP ARG ILE ASN SEQRES 2 D 88 GLY VAL TYR GLY ALA ASP ALA LYS PHE PRO VAL ARG ALA SEQRES 3 D 88 SER GLN ASP ASN THR GLN VAL LYS ALA LEU TYR LYS SER SEQRES 4 D 88 TYR LEU GLU LYS PRO LEU GLY HIS LYS SER HIS ASP LEU SEQRES 5 D 88 LEU HIS THR HIS TRP PHE ASP LYS SER LYS GLY VAL LYS SEQRES 6 D 88 GLU LEU THR THR ALA GLY LYS LEU PRO ASN PRO ARG ALA SEQRES 7 D 88 SER GLU PHE GLU GLY PRO TYR PRO TYR GLU SEQRES 1 E 78 ASP GLY ALA ALA LEU TYR LYS SER CYS ILE GLY CYS HIS SEQRES 2 E 78 GLY ALA ASP GLY SER LYS ALA ALA MET GLY SER ALA LYS SEQRES 3 E 78 PRO VAL LYS GLY GLN GLY ALA GLU GLU LEU TYR LYS LYS SEQRES 4 E 78 MET LYS GLY TYR ALA ASP GLY SER TYR GLY GLY GLU ARG SEQRES 5 E 78 LYS ALA MET MET THR ASN ALA VAL LYS LYS TYR SER ASP SEQRES 6 E 78 GLU GLU LEU LYS ALA LEU ALA ASP TYR MET SER LYS LEU HET SF4 A 1 8 HET SF4 A 2 8 HET SF4 A 3 8 HET PDT A 4 5 HET FE2 A 5 1 HET FE2 A 6 1 HET CYN A 7 2 HET CYN A 8 2 HET CMO A 9 2 HET CMO A 10 2 HET ZN D 12 1 HET HEC E 80 43 HETNAM SF4 IRON/SULFUR CLUSTER HETNAM PDT 1,3-PROPANEDITHIOL HETNAM FE2 FE (II) ION HETNAM CYN CYANIDE ION HETNAM CMO CARBON MONOXIDE HETNAM ZN ZINC ION HETNAM HEC HEME C FORMUL 4 SF4 3(FE4 S4) FORMUL 7 PDT C3 H8 S2 FORMUL 8 FE2 2(FE 2+) FORMUL 10 CYN 2(C N 1-) FORMUL 12 CMO 2(C O) FORMUL 14 ZN ZN 2+ FORMUL 15 HEC C34 H34 FE N4 O4 FORMUL 16 HOH *(H2 O) HELIX 1 1 GLN A 71 CYS A 76 1 6 HELIX 2 2 TRP A 87 ASP A 97 1 11 HELIX 3 3 ALA A 107 ALA A 113 1 7 HELIX 4 4 LEU A 114 GLY A 119 5 6 HELIX 5 5 VAL A 125 GLY A 128 5 4 HELIX 6 6 LYS A 129 LEU A 134 1 6 HELIX 7 7 GLN A 135 GLY A 138 5 4 HELIX 8 8 GLU A 146 THR A 165 1 20 HELIX 9 9 CYS A 179 TYR A 190 1 12 HELIX 10 10 LEU A 193 PHE A 197 5 5 HELIX 11 11 SER A 202 LEU A 210 1 9 HELIX 12 12 LEU A 210 MET A 219 1 10 HELIX 13 13 ASP A 222 LYS A 224 5 3 HELIX 14 14 CYS A 234 GLU A 240 1 7 HELIX 15 15 GLY A 241 LYS A 247 5 7 HELIX 16 16 THR A 259 ALA A 270 1 12 HELIX 17 17 ASP A 273 LEU A 277 5 5 HELIX 18 18 THR A 290 THR A 294 5 5 HELIX 19 19 GLY A 301 TYR A 311 1 11 HELIX 20 20 PHE A 324 ARG A 328 5 5 HELIX 21 21 ALA A 353 ALA A 365 1 13 HELIX 22 22 GLY A 381 GLY A 386 1 6 HELIX 23 23 GLN D 38 ALA D 55 1 18 HELIX 24 24 ALA D 61 ASP D 64 5 4 HELIX 25 25 ASN D 65 SER D 74 1 10 HELIX 26 26 SER D 96 LEU D 102 1 7 HELIX 27 27 THR D 103 GLY D 106 5 4 HELIX 28 28 ARG D 112 PHE D 116 5 5 HELIX 29 29 GLY E 3 LYS E 8 1 6 HELIX 30 30 SER E 9 HIS E 14 5 6 HELIX 31 31 GLY E 33 ALA E 45 1 13 HELIX 32 32 ALA E 55 TYR E 64 1 10 HELIX 33 33 GLU E 67 MET E 76 1 10 SHEET 1 A 2 ILE A 50 GLY A 52 0 SHEET 2 A 2 HIS A 58 ILE A 60 -1 N SER A 59 O PHE A 51 SHEET 1 B 3 LYS A 101 PRO A 106 0 SHEET 2 B 3 VAL A 226 ILE A 231 1 N TYR A 227 O LYS A 101 SHEET 3 B 3 ALA A 256 LEU A 258 1 N ALA A 256 O SER A 230 SHEET 1 C 3 ILE A 333 GLU A 335 0 SHEET 2 C 3 ALA A 348 HIS A 351 -1 N VAL A 349 O LYS A 334 SHEET 3 C 3 GLU A 374 MET A 376 1 N GLU A 374 O VAL A 350 SHEET 1 D 2 VAL A 338 VAL A 340 0 SHEET 2 D 2 THR A 343 VAL A 345 -1 N VAL A 345 O VAL A 338 LINK SG CYS A 35 FE3 SF4 A 1 1555 1555 2.27 LINK SG CYS A 38 FE2 SF4 A 1 1555 1555 2.18 LINK SG CYS A 41 FE4 SF4 A 1 1555 1555 2.26 LINK SG CYS A 45 FE4 SF4 A 2 1555 1555 2.26 LINK SG CYS A 66 FE2 SF4 A 2 1555 1555 2.17 LINK SG CYS A 69 FE3 SF4 A 2 1555 1555 2.26 LINK SG CYS A 72 FE1 SF4 A 2 1555 1555 2.24 LINK SG CYS A 76 FE1 SF4 A 1 1555 1555 2.21 LINK SG CYS A 179 FE2 SF4 A 3 1555 1555 2.31 LINK SG CYS A 234 FE1 SF4 A 3 1555 1555 2.28 LINK SG CYS A 378 FE3 SF4 A 3 1555 1555 2.20 LINK SG CYS A 382 FE4 SF4 A 3 1555 1555 2.29 LINK SG CYS E 10 CAB HEC E 80 1555 1555 1.84 LINK SG CYS E 13 CAC HEC E 80 1555 1555 1.84 LINK NE2 HIS E 14 FE HEC E 80 1555 1555 2.25 LINK SD MET E 57 FE HEC E 80 1555 1555 2.30 LINK S1 PDT A 4 FE FE2 A 6 1555 1555 2.54 LINK S1 PDT A 4 FE FE2 A 5 1555 1555 2.37 LINK S1 PDT A 4 C CYN A 8 1555 1555 1.83 LINK S2 PDT A 4 FE FE2 A 6 1555 1555 2.52 LINK S2 PDT A 4 FE FE2 A 5 1555 1555 2.32 LINK FE FE2 A 5 N CYN A 8 1555 1555 2.73 LINK FE FE2 A 5 O CMO A 10 1555 1555 2.48 LINK FE FE2 A 6 N CYN A 7 1555 1555 2.60 LINK FE FE2 A 6 O CMO A 9 1555 1555 2.63 LINK C CYN A 7 C CMO A 9 1555 1555 1.57 LINK C CYN A 8 C CMO A 10 1555 1555 1.43 CISPEP 1 LEU A 131 ALA A 132 0 11.87 CISPEP 2 HIS A 141 CYS A 142 0 -0.23 CISPEP 3 CYS A 142 TRP A 143 0 -16.13 CISPEP 4 MET A 170 PRO A 171 0 -5.55 CISPEP 5 LEU A 172 PRO A 173 0 -9.58 CISPEP 6 MET A 391 PRO A 392 0 6.66 CISPEP 7 HIS D 91 TRP D 92 0 -29.33 SITE 1 AC1 8 PDT A 4 FE2 A 6 CYN A 7 CYN A 8 SITE 2 AC1 8 CMO A 9 CMO A 10 HOH A 11 ALA A 293 SITE 1 AC2 10 PDT A 4 FE2 A 5 CYN A 7 CYN A 8 SITE 2 AC2 10 CMO A 9 CMO A 10 HOH A 11 PRO A 108 SITE 3 AC2 10 THR A 145 ALA A 149 SITE 1 AC3 4 HIS D 82 LYS D 83 HIS D 85 ASP D 86 SITE 1 AC4 10 PDT A 4 FE2 A 5 FE2 A 6 CYN A 8 SITE 2 AC4 10 CMO A 9 CMO A 10 HOH A 11 ALA A 149 SITE 3 AC4 10 PRO A 203 PHE A 296 SITE 1 AC5 13 PDT A 4 FE2 A 5 FE2 A 6 CYN A 7 SITE 2 AC5 13 CMO A 9 CMO A 10 HOH A 11 PRO A 108 SITE 3 AC5 13 ALA A 109 ALA A 293 THR A 294 ILE A 295 SITE 4 AC5 13 PHE A 296 SITE 1 AC6 13 ILE A 30 LYS A 34 CYS A 35 ILE A 36 SITE 2 AC6 13 GLY A 37 CYS A 38 ASP A 39 CYS A 41 SITE 3 AC6 13 SER A 42 HIS A 58 HIS A 75 CYS A 76 SITE 4 AC6 13 ILE A 81 SITE 1 AC7 8 VAL A 28 TYR A 44 CYS A 45 CYS A 66 SITE 2 AC7 8 ASN A 68 CYS A 69 GLY A 70 CYS A 72 SITE 1 AC8 10 CYS A 69 CYS A 179 PRO A 180 CYS A 234 SITE 2 AC8 10 LYS A 237 MET A 376 ALA A 377 CYS A 378 SITE 3 AC8 10 CYS A 382 GLY A 385 SITE 1 AC9 14 FE2 A 5 FE2 A 6 CYN A 7 CYN A 8 SITE 2 AC9 14 CMO A 9 CMO A 10 ALA A 107 PRO A 108 SITE 3 AC9 14 ALA A 109 VAL A 110 LYS A 237 ILE A 295 SITE 4 AC9 14 PHE A 296 GLY A 297 SITE 1 BC1 11 PDT A 4 FE2 A 5 FE2 A 6 CYN A 7 SITE 2 BC1 11 CYN A 8 CMO A 10 HOH A 11 ALA A 107 SITE 3 BC1 11 PRO A 108 THR A 145 PRO A 203 SITE 1 BC2 11 PDT A 4 FE2 A 5 FE2 A 6 CYN A 7 SITE 2 BC2 11 CYN A 8 CMO A 9 HOH A 11 ALA A 293 SITE 3 BC2 11 THR A 294 ILE A 295 PHE A 296 SITE 1 BC3 20 CYS A 38 GLY A 55 CYS E 10 CYS E 13 SITE 2 BC3 20 HIS E 14 MET E 23 GLY E 24 ALA E 26 SITE 3 BC3 20 LYS E 27 GLN E 32 LEU E 37 MET E 41 SITE 4 BC3 20 TYR E 44 TYR E 49 GLY E 51 GLU E 52 SITE 5 BC3 20 ARG E 53 MET E 56 MET E 57 TYR E 64 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000