data_1E3O # _entry.id 1E3O # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.382 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1E3O pdb_00001e3o 10.2210/pdb1e3o/pdb PDBE EBI-4969 ? ? WWPDB D_1290004969 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 1CQT unspecified 'CRYSTAL STRUCTURE OF A TERNARY COMPLEX CONTAINING AN OCA-B PEPTIDE, THE OCT-1 POU DOMAIN, AND AN OCTAMER ELEMENT' PDB 1OCT unspecified 'OCT-1 (POU DOMAIN)' PDB 1POG unspecified . # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1E3O _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2000-06-20 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Remenyi, A.' 1 ? 'Tomilin, A.' 2 ? 'Pohl, E.' 3 ? 'Schoeler, H.' 4 ? 'Wilmanns, M.' 5 ? # _citation.id primary _citation.title 'Differential Dimer Activities of the Transcription Factor Oct-1 by DNA-Induced Interface Swapping' _citation.journal_abbrev Mol.Cell _citation.journal_volume 8 _citation.page_first 569 _citation.page_last ? _citation.year 2001 _citation.journal_id_ASTM MOCEFL _citation.country US _citation.journal_id_ISSN 1097-2765 _citation.journal_id_CSD 2168 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 11583619 _citation.pdbx_database_id_DOI '10.1016/S1097-2765(01)00336-7' # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Remenyi, A.' 1 ? primary 'Tomilin, A.' 2 ? primary 'Pohl, E.' 3 ? primary 'Lins, K.' 4 ? primary 'Philippsen, A.' 5 ? primary 'Reinbold, R.' 6 ? primary 'Scholer, H.R.' 7 ? primary 'Wilmanns, M.' 8 ? # _cell.entry_id 1E3O _cell.length_a 93.300 _cell.length_b 52.400 _cell.length_c 69.000 _cell.angle_alpha 90.00 _cell.angle_beta 127.60 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1E3O _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(*AP*TP*GP*CP*AP*TP*GP*AP*GP*GP*A)-3'" 3422.260 1 ? ? ? ? 2 polymer syn "5'-D(*TP*CP*CP*TP*CP*AP*TP*GP*CP*AP*T)-3'" 3284.160 1 ? ? ? ? 3 polymer man 'OCTAMER-BINDING TRANSCRIPTION FACTOR 1' 18398.877 1 ? YES 'DNA-BINDING DOMAIN' ? 4 water nat water 18.015 138 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DA)(DT)(DG)(DC)(DA)(DT)(DG)(DA)(DG)(DG)(DA)' ATGCATGAGGA A ? 2 polydeoxyribonucleotide no no '(DT)(DC)(DC)(DT)(DC)(DA)(DT)(DG)(DC)(DA)(DT)' TCCTCATGCAT B ? 3 'polypeptide(L)' no no ;EEPSDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMSKLKPLLEKWLNDAEANLSS DSSLSSPSALNSPGIEGLSRRRKKRTSIETNIRVALEKSFMENQKPTSEDITLIAEQLNMEKEVIRVWFSNRRQKEKRIN ; ;EEPSDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMSKLKPLLEKWLNDAEANLSS DSSLSSPSALNSPGIEGLSRRRKKRTSIETNIRVALEKSFMENQKPTSEDITLIAEQLNMEKEVIRVWFSNRRQKEKRIN ; C ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DA n 1 2 DT n 1 3 DG n 1 4 DC n 1 5 DA n 1 6 DT n 1 7 DG n 1 8 DA n 1 9 DG n 1 10 DG n 1 11 DA n 2 1 DT n 2 2 DC n 2 3 DC n 2 4 DT n 2 5 DC n 2 6 DA n 2 7 DT n 2 8 DG n 2 9 DC n 2 10 DA n 2 11 DT n 3 1 GLU n 3 2 GLU n 3 3 PRO n 3 4 SER n 3 5 ASP n 3 6 LEU n 3 7 GLU n 3 8 GLU n 3 9 LEU n 3 10 GLU n 3 11 GLN n 3 12 PHE n 3 13 ALA n 3 14 LYS n 3 15 THR n 3 16 PHE n 3 17 LYS n 3 18 GLN n 3 19 ARG n 3 20 ARG n 3 21 ILE n 3 22 LYS n 3 23 LEU n 3 24 GLY n 3 25 PHE n 3 26 THR n 3 27 GLN n 3 28 GLY n 3 29 ASP n 3 30 VAL n 3 31 GLY n 3 32 LEU n 3 33 ALA n 3 34 MET n 3 35 GLY n 3 36 LYS n 3 37 LEU n 3 38 TYR n 3 39 GLY n 3 40 ASN n 3 41 ASP n 3 42 PHE n 3 43 SER n 3 44 GLN n 3 45 THR n 3 46 THR n 3 47 ILE n 3 48 SER n 3 49 ARG n 3 50 PHE n 3 51 GLU n 3 52 ALA n 3 53 LEU n 3 54 ASN n 3 55 LEU n 3 56 SER n 3 57 PHE n 3 58 LYS n 3 59 ASN n 3 60 MET n 3 61 SER n 3 62 LYS n 3 63 LEU n 3 64 LYS n 3 65 PRO n 3 66 LEU n 3 67 LEU n 3 68 GLU n 3 69 LYS n 3 70 TRP n 3 71 LEU n 3 72 ASN n 3 73 ASP n 3 74 ALA n 3 75 GLU n 3 76 ALA n 3 77 ASN n 3 78 LEU n 3 79 SER n 3 80 SER n 3 81 ASP n 3 82 SER n 3 83 SER n 3 84 LEU n 3 85 SER n 3 86 SER n 3 87 PRO n 3 88 SER n 3 89 ALA n 3 90 LEU n 3 91 ASN n 3 92 SER n 3 93 PRO n 3 94 GLY n 3 95 ILE n 3 96 GLU n 3 97 GLY n 3 98 LEU n 3 99 SER n 3 100 ARG n 3 101 ARG n 3 102 ARG n 3 103 LYS n 3 104 LYS n 3 105 ARG n 3 106 THR n 3 107 SER n 3 108 ILE n 3 109 GLU n 3 110 THR n 3 111 ASN n 3 112 ILE n 3 113 ARG n 3 114 VAL n 3 115 ALA n 3 116 LEU n 3 117 GLU n 3 118 LYS n 3 119 SER n 3 120 PHE n 3 121 MET n 3 122 GLU n 3 123 ASN n 3 124 GLN n 3 125 LYS n 3 126 PRO n 3 127 THR n 3 128 SER n 3 129 GLU n 3 130 ASP n 3 131 ILE n 3 132 THR n 3 133 LEU n 3 134 ILE n 3 135 ALA n 3 136 GLU n 3 137 GLN n 3 138 LEU n 3 139 ASN n 3 140 MET n 3 141 GLU n 3 142 LYS n 3 143 GLU n 3 144 VAL n 3 145 ILE n 3 146 ARG n 3 147 VAL n 3 148 TRP n 3 149 PHE n 3 150 SER n 3 151 ASN n 3 152 ARG n 3 153 ARG n 3 154 GLN n 3 155 LYS n 3 156 GLU n 3 157 LYS n 3 158 ARG n 3 159 ILE n 3 160 ASN n # _entity_src_gen.entity_id 3 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location NUCLEUS _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PET-9D _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'THE PROTEIN WAS EXPRESSED IN E.COLI BY RECOMBINANT DNA TECHNOLOGY' # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample ? ? 'Homo sapiens' Human 9606 ? 2 1 sample ? ? 'Homo sapiens' Human 9606 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 PDB 1E3O 1 ? ? 1E3O ? 2 PDB 1E3O 2 ? ? 1E3O ? 3 UNP OCT1_HUMAN 3 ? ? P14859 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1E3O A 1 ? 11 ? 1E3O 201 ? 211 ? 201 211 2 2 1E3O B 1 ? 11 ? 1E3O 201 ? 211 ? 201 211 3 3 1E3O C 1 ? 160 ? P14859 280 ? 438 ? 1 160 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 3 1E3O SER C 61 ? UNP P14859 CYS 340 'engineered mutation' 61 1 3 1E3O ALA C 76 ? UNP P14859 ASN 355 conflict 76 2 3 1E3O ASN C 77 ? UNP P14859 ? ? insertion 77 3 3 1E3O MET C 121 ? UNP P14859 LEU 399 conflict 121 4 3 1E3O ASP C 130 ? UNP P14859 GLU 408 conflict 130 5 3 1E3O LEU C 133 ? UNP P14859 MET 411 conflict 133 6 3 1E3O GLU C 136 ? UNP P14859 ASP 414 conflict 136 7 3 1E3O SER C 150 ? UNP P14859 CYS 428 'engineered mutation' 150 8 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1E3O _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.66 _exptl_crystal.density_percent_sol 53.78 _exptl_crystal.description ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.00 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '22% PEG3350, 50MM HEPES, PH 7.0, 1.8MM SPERMINE' # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 1999-11-15 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.8424 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'EMBL/DESY, HAMBURG BEAMLINE BW7A' _diffrn_source.pdbx_synchrotron_site 'EMBL/DESY, HAMBURG' _diffrn_source.pdbx_synchrotron_beamline BW7A _diffrn_source.pdbx_wavelength 0.8424 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 1E3O _reflns.observed_criterion_sigma_I 2.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 20.000 _reflns.d_resolution_high 1.900 _reflns.number_obs 91810 _reflns.number_all ? _reflns.percent_possible_obs 95.3 _reflns.pdbx_Rmerge_I_obs 0.03900 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 24.4000 _reflns.B_iso_Wilson_estimate 36 _reflns.pdbx_redundancy 4.600 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.90 _reflns_shell.d_res_low 1.97 _reflns_shell.percent_possible_all 97.0 _reflns_shell.Rmerge_I_obs 0.11100 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 6.200 _reflns_shell.pdbx_redundancy ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 1E3O _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 19950 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 20 _refine.ls_d_res_high 1.9 _refine.ls_percent_reflns_obs 95.3 _refine.ls_R_factor_obs 0.220 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.220 _refine.ls_R_factor_R_free 0.242 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 1007 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ;THE FOLLOWING AMINO ACID SIDE CHAINS A EXCLUDED FROM THE FINAL MODEL BECAUSE THEY HAVE POORLY DEFINED ELECTRON DENSITY: GLU 1, LYS 22, LYS 118, MET 121, LYS 125, GLU 129, LEU 133, GLU 136, LYS 142 ; _refine.pdbx_starting_model 1OCT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1052 _refine_hist.pdbx_number_atoms_nucleic_acid 441 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 138 _refine_hist.number_atoms_total 1631 _refine_hist.d_res_high 1.9 _refine_hist.d_res_low 20 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.013 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.5 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _struct.entry_id 1E3O _struct.title 'Crystal structure of Oct-1 POU dimer bound to MORE' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1E3O _struct_keywords.pdbx_keywords TRANSCRIPTION _struct_keywords.text 'TRANSCRIPTION, POU DOMAIN, DIMER, DNA BINDING' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP C 5 ? LEU C 23 ? ASP C 5 LEU C 23 1 ? 19 HELX_P HELX_P2 2 THR C 26 ? GLY C 39 ? THR C 26 GLY C 39 1 ? 14 HELX_P HELX_P3 3 SER C 43 ? LEU C 53 ? SER C 43 LEU C 53 1 ? 11 HELX_P HELX_P4 4 SER C 56 ? GLU C 75 ? SER C 56 GLU C 75 1 ? 20 HELX_P HELX_P5 5 GLU C 109 ? ASN C 123 ? GLU C 109 ASN C 123 1 ? 15 HELX_P HELX_P6 6 THR C 127 ? ASN C 139 ? THR C 127 ASN C 139 1 ? 13 HELX_P HELX_P7 7 GLU C 141 ? LYS C 157 ? GLU C 141 LYS C 157 1 ? 17 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DA 1 N1 ? ? ? 1_555 B DT 11 N3 ? ? A DA 201 B DT 211 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DA 1 N6 ? ? ? 1_555 B DT 11 O4 ? ? A DA 201 B DT 211 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DT 2 N3 ? ? ? 1_555 B DA 10 N1 ? ? A DT 202 B DA 210 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DT 2 O4 ? ? ? 1_555 B DA 10 N6 ? ? A DT 202 B DA 210 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DG 3 N1 ? ? ? 1_555 B DC 9 N3 ? ? A DG 203 B DC 209 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DG 3 N2 ? ? ? 1_555 B DC 9 O2 ? ? A DG 203 B DC 209 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DG 3 O6 ? ? ? 1_555 B DC 9 N4 ? ? A DG 203 B DC 209 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DC 4 N3 ? ? ? 1_555 B DG 8 N1 ? ? A DC 204 B DG 208 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DC 4 N4 ? ? ? 1_555 B DG 8 O6 ? ? A DC 204 B DG 208 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DC 4 O2 ? ? ? 1_555 B DG 8 N2 ? ? A DC 204 B DG 208 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DA 5 N1 ? ? ? 1_555 B DT 7 N3 ? ? A DA 205 B DT 207 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DA 5 N6 ? ? ? 1_555 B DT 7 O4 ? ? A DA 205 B DT 207 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DT 6 N3 ? ? ? 1_555 B DA 6 N1 ? ? A DT 206 B DA 206 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DT 6 O4 ? ? ? 1_555 B DA 6 N6 ? ? A DT 206 B DA 206 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DG 7 N1 ? ? ? 1_555 B DC 5 N3 ? ? A DG 207 B DC 205 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DG 7 N2 ? ? ? 1_555 B DC 5 O2 ? ? A DG 207 B DC 205 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DG 7 O6 ? ? ? 1_555 B DC 5 N4 ? ? A DG 207 B DC 205 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DA 8 N1 ? ? ? 1_555 B DT 4 N3 ? ? A DA 208 B DT 204 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DA 8 N6 ? ? ? 1_555 B DT 4 O4 ? ? A DA 208 B DT 204 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DG 9 N1 ? ? ? 1_555 B DC 3 N3 ? ? A DG 209 B DC 203 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DG 9 N2 ? ? ? 1_555 B DC 3 O2 ? ? A DG 209 B DC 203 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DG 9 O6 ? ? ? 1_555 B DC 3 N4 ? ? A DG 209 B DC 203 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DG 10 N1 ? ? ? 1_555 B DC 2 N3 ? ? A DG 210 B DC 202 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DG 10 N2 ? ? ? 1_555 B DC 2 O2 ? ? A DG 210 B DC 202 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DG 10 O6 ? ? ? 1_555 B DC 2 N4 ? ? A DG 210 B DC 202 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DA 11 N1 ? ? ? 1_555 B DT 1 N3 ? ? A DA 211 B DT 201 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DA 11 N6 ? ? ? 1_555 B DT 1 O4 ? ? A DA 211 B DT 201 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _database_PDB_matrix.entry_id 1E3O _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1E3O _atom_sites.fract_transf_matrix[1][1] 0.010718 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.008254 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019084 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.018292 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DA 1 201 201 DA DA A . n A 1 2 DT 2 202 202 DT DT A . n A 1 3 DG 3 203 203 DG DG A . n A 1 4 DC 4 204 204 DC DC A . n A 1 5 DA 5 205 205 DA DA A . n A 1 6 DT 6 206 206 DT DT A . n A 1 7 DG 7 207 207 DG DG A . n A 1 8 DA 8 208 208 DA DA A . n A 1 9 DG 9 209 209 DG DG A . n A 1 10 DG 10 210 210 DG DG A . n A 1 11 DA 11 211 211 DA DA A . n B 2 1 DT 1 201 201 DT DT B . n B 2 2 DC 2 202 202 DC DC B . n B 2 3 DC 3 203 203 DC DC B . n B 2 4 DT 4 204 204 DT DT B . n B 2 5 DC 5 205 205 DC DC B . n B 2 6 DA 6 206 206 DA DA B . n B 2 7 DT 7 207 207 DT DT B . n B 2 8 DG 8 208 208 DG DG B . n B 2 9 DC 9 209 209 DC DC B . n B 2 10 DA 10 210 210 DA DA B . n B 2 11 DT 11 211 211 DT DT B . n C 3 1 GLU 1 1 1 GLU GLU C . n C 3 2 GLU 2 2 2 GLU GLU C . n C 3 3 PRO 3 3 3 PRO PRO C . n C 3 4 SER 4 4 4 SER SER C . n C 3 5 ASP 5 5 5 ASP ASP C . n C 3 6 LEU 6 6 6 LEU LEU C . n C 3 7 GLU 7 7 7 GLU GLU C . n C 3 8 GLU 8 8 8 GLU GLU C . n C 3 9 LEU 9 9 9 LEU LEU C . n C 3 10 GLU 10 10 10 GLU GLU C . n C 3 11 GLN 11 11 11 GLN GLN C . n C 3 12 PHE 12 12 12 PHE PHE C . n C 3 13 ALA 13 13 13 ALA ALA C . n C 3 14 LYS 14 14 14 LYS LYS C . n C 3 15 THR 15 15 15 THR THR C . n C 3 16 PHE 16 16 16 PHE PHE C . n C 3 17 LYS 17 17 17 LYS LYS C . n C 3 18 GLN 18 18 18 GLN GLN C . n C 3 19 ARG 19 19 19 ARG ARG C . n C 3 20 ARG 20 20 20 ARG ARG C . n C 3 21 ILE 21 21 21 ILE ILE C . n C 3 22 LYS 22 22 22 LYS LYS C . n C 3 23 LEU 23 23 23 LEU LEU C . n C 3 24 GLY 24 24 24 GLY GLY C . n C 3 25 PHE 25 25 25 PHE PHE C . n C 3 26 THR 26 26 26 THR THR C . n C 3 27 GLN 27 27 27 GLN GLN C . n C 3 28 GLY 28 28 28 GLY GLY C . n C 3 29 ASP 29 29 29 ASP ASP C . n C 3 30 VAL 30 30 30 VAL VAL C . n C 3 31 GLY 31 31 31 GLY GLY C . n C 3 32 LEU 32 32 32 LEU LEU C . n C 3 33 ALA 33 33 33 ALA ALA C . n C 3 34 MET 34 34 34 MET MET C . n C 3 35 GLY 35 35 35 GLY GLY C . n C 3 36 LYS 36 36 36 LYS LYS C . n C 3 37 LEU 37 37 37 LEU LEU C . n C 3 38 TYR 38 38 38 TYR TYR C . n C 3 39 GLY 39 39 39 GLY GLY C . n C 3 40 ASN 40 40 40 ASN ASN C . n C 3 41 ASP 41 41 41 ASP ASP C . n C 3 42 PHE 42 42 42 PHE PHE C . n C 3 43 SER 43 43 43 SER SER C . n C 3 44 GLN 44 44 44 GLN GLN C . n C 3 45 THR 45 45 45 THR THR C . n C 3 46 THR 46 46 46 THR THR C . n C 3 47 ILE 47 47 47 ILE ILE C . n C 3 48 SER 48 48 48 SER SER C . n C 3 49 ARG 49 49 49 ARG ARG C . n C 3 50 PHE 50 50 50 PHE PHE C . n C 3 51 GLU 51 51 51 GLU GLU C . n C 3 52 ALA 52 52 52 ALA ALA C . n C 3 53 LEU 53 53 53 LEU LEU C . n C 3 54 ASN 54 54 54 ASN ASN C . n C 3 55 LEU 55 55 55 LEU LEU C . n C 3 56 SER 56 56 56 SER SER C . n C 3 57 PHE 57 57 57 PHE PHE C . n C 3 58 LYS 58 58 58 LYS LYS C . n C 3 59 ASN 59 59 59 ASN ASN C . n C 3 60 MET 60 60 60 MET MET C . n C 3 61 SER 61 61 61 SER SER C . n C 3 62 LYS 62 62 62 LYS LYS C . n C 3 63 LEU 63 63 63 LEU LEU C . n C 3 64 LYS 64 64 64 LYS LYS C . n C 3 65 PRO 65 65 65 PRO PRO C . n C 3 66 LEU 66 66 66 LEU LEU C . n C 3 67 LEU 67 67 67 LEU LEU C . n C 3 68 GLU 68 68 68 GLU GLU C . n C 3 69 LYS 69 69 69 LYS LYS C . n C 3 70 TRP 70 70 70 TRP TRP C . n C 3 71 LEU 71 71 71 LEU LEU C . n C 3 72 ASN 72 72 72 ASN ASN C . n C 3 73 ASP 73 73 73 ASP ASP C . n C 3 74 ALA 74 74 74 ALA ALA C . n C 3 75 GLU 75 75 75 GLU GLU C . n C 3 76 ALA 76 76 ? ? ? C . n C 3 77 ASN 77 77 ? ? ? C . n C 3 78 LEU 78 78 ? ? ? C . n C 3 79 SER 79 79 ? ? ? C . n C 3 80 SER 80 80 ? ? ? C . n C 3 81 ASP 81 81 ? ? ? C . n C 3 82 SER 82 82 ? ? ? C . n C 3 83 SER 83 83 ? ? ? C . n C 3 84 LEU 84 84 ? ? ? C . n C 3 85 SER 85 85 ? ? ? C . n C 3 86 SER 86 86 ? ? ? C . n C 3 87 PRO 87 87 ? ? ? C . n C 3 88 SER 88 88 ? ? ? C . n C 3 89 ALA 89 89 ? ? ? C . n C 3 90 LEU 90 90 ? ? ? C . n C 3 91 ASN 91 91 ? ? ? C . n C 3 92 SER 92 92 ? ? ? C . n C 3 93 PRO 93 93 ? ? ? C . n C 3 94 GLY 94 94 ? ? ? C . n C 3 95 ILE 95 95 ? ? ? C . n C 3 96 GLU 96 96 ? ? ? C . n C 3 97 GLY 97 97 ? ? ? C . n C 3 98 LEU 98 98 ? ? ? C . n C 3 99 SER 99 99 ? ? ? C . n C 3 100 ARG 100 100 ? ? ? C . n C 3 101 ARG 101 101 ? ? ? C . n C 3 102 ARG 102 102 ? ? ? C . n C 3 103 LYS 103 103 ? ? ? C . n C 3 104 LYS 104 104 104 LYS LYS C . n C 3 105 ARG 105 105 105 ARG ARG C . n C 3 106 THR 106 106 106 THR THR C . n C 3 107 SER 107 107 107 SER SER C . n C 3 108 ILE 108 108 108 ILE ILE C . n C 3 109 GLU 109 109 109 GLU GLU C . n C 3 110 THR 110 110 110 THR THR C . n C 3 111 ASN 111 111 111 ASN ASN C . n C 3 112 ILE 112 112 112 ILE ILE C . n C 3 113 ARG 113 113 113 ARG ARG C . n C 3 114 VAL 114 114 114 VAL VAL C . n C 3 115 ALA 115 115 115 ALA ALA C . n C 3 116 LEU 116 116 116 LEU LEU C . n C 3 117 GLU 117 117 117 GLU GLU C . n C 3 118 LYS 118 118 118 LYS LYS C . n C 3 119 SER 119 119 119 SER SER C . n C 3 120 PHE 120 120 120 PHE PHE C . n C 3 121 MET 121 121 121 MET MET C . n C 3 122 GLU 122 122 122 GLU GLU C . n C 3 123 ASN 123 123 123 ASN ASN C . n C 3 124 GLN 124 124 124 GLN GLN C . n C 3 125 LYS 125 125 125 LYS LYS C . n C 3 126 PRO 126 126 126 PRO PRO C . n C 3 127 THR 127 127 127 THR THR C . n C 3 128 SER 128 128 128 SER SER C . n C 3 129 GLU 129 129 129 GLU GLU C . n C 3 130 ASP 130 130 130 ASP ASP C . n C 3 131 ILE 131 131 131 ILE ILE C . n C 3 132 THR 132 132 132 THR THR C . n C 3 133 LEU 133 133 133 LEU LEU C . n C 3 134 ILE 134 134 134 ILE ILE C . n C 3 135 ALA 135 135 135 ALA ALA C . n C 3 136 GLU 136 136 136 GLU GLU C . n C 3 137 GLN 137 137 137 GLN GLN C . n C 3 138 LEU 138 138 138 LEU LEU C . n C 3 139 ASN 139 139 139 ASN ASN C . n C 3 140 MET 140 140 140 MET MET C . n C 3 141 GLU 141 141 141 GLU GLU C . n C 3 142 LYS 142 142 142 LYS LYS C . n C 3 143 GLU 143 143 143 GLU GLU C . n C 3 144 VAL 144 144 144 VAL VAL C . n C 3 145 ILE 145 145 145 ILE ILE C . n C 3 146 ARG 146 146 146 ARG ARG C . n C 3 147 VAL 147 147 147 VAL VAL C . n C 3 148 TRP 148 148 148 TRP TRP C . n C 3 149 PHE 149 149 149 PHE PHE C . n C 3 150 SER 150 150 150 SER SER C . n C 3 151 ASN 151 151 151 ASN ASN C . n C 3 152 ARG 152 152 152 ARG ARG C . n C 3 153 ARG 153 153 153 ARG ARG C . n C 3 154 GLN 154 154 154 GLN GLN C . n C 3 155 LYS 155 155 155 LYS LYS C . n C 3 156 GLU 156 156 156 GLU GLU C . n C 3 157 LYS 157 157 157 LYS LYS C . n C 3 158 ARG 158 158 158 ARG ARG C . n C 3 159 ILE 159 159 159 ILE ILE C . n C 3 160 ASN 160 160 160 ASN ASN C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 HOH 1 2001 2001 HOH HOH A . D 4 HOH 2 2002 2002 HOH HOH A . D 4 HOH 3 2003 2003 HOH HOH A . D 4 HOH 4 2004 2004 HOH HOH A . D 4 HOH 5 2005 2005 HOH HOH A . D 4 HOH 6 2006 2006 HOH HOH A . D 4 HOH 7 2007 2007 HOH HOH A . D 4 HOH 8 2008 2008 HOH HOH A . D 4 HOH 9 2009 2009 HOH HOH A . D 4 HOH 10 2010 2010 HOH HOH A . D 4 HOH 11 2011 2011 HOH HOH A . D 4 HOH 12 2012 2012 HOH HOH A . D 4 HOH 13 2013 2013 HOH HOH A . D 4 HOH 14 2014 2014 HOH HOH A . D 4 HOH 15 2015 2015 HOH HOH A . D 4 HOH 16 2016 2016 HOH HOH A . D 4 HOH 17 2017 2017 HOH HOH A . D 4 HOH 18 2018 2018 HOH HOH A . D 4 HOH 19 2019 2019 HOH HOH A . D 4 HOH 20 2020 2020 HOH HOH A . D 4 HOH 21 2021 2021 HOH HOH A . D 4 HOH 22 2022 2022 HOH HOH A . D 4 HOH 23 2023 2023 HOH HOH A . E 4 HOH 1 2001 2001 HOH HOH B . E 4 HOH 2 2002 2002 HOH HOH B . E 4 HOH 3 2003 2003 HOH HOH B . E 4 HOH 4 2004 2004 HOH HOH B . E 4 HOH 5 2005 2005 HOH HOH B . E 4 HOH 6 2006 2006 HOH HOH B . E 4 HOH 7 2007 2007 HOH HOH B . E 4 HOH 8 2008 2008 HOH HOH B . E 4 HOH 9 2009 2009 HOH HOH B . E 4 HOH 10 2010 2010 HOH HOH B . E 4 HOH 11 2011 2011 HOH HOH B . E 4 HOH 12 2012 2012 HOH HOH B . E 4 HOH 13 2013 2013 HOH HOH B . E 4 HOH 14 2014 2014 HOH HOH B . E 4 HOH 15 2015 2015 HOH HOH B . E 4 HOH 16 2016 2016 HOH HOH B . E 4 HOH 17 2017 2017 HOH HOH B . E 4 HOH 18 2018 2018 HOH HOH B . E 4 HOH 19 2019 2019 HOH HOH B . E 4 HOH 20 2020 2020 HOH HOH B . E 4 HOH 21 2021 2021 HOH HOH B . E 4 HOH 22 2022 2022 HOH HOH B . E 4 HOH 23 2023 2023 HOH HOH B . E 4 HOH 24 2024 2024 HOH HOH B . E 4 HOH 25 2025 2025 HOH HOH B . E 4 HOH 26 2026 2026 HOH HOH B . E 4 HOH 27 2027 2027 HOH HOH B . E 4 HOH 28 2028 2028 HOH HOH B . E 4 HOH 29 2029 2029 HOH HOH B . E 4 HOH 30 2030 2030 HOH HOH B . E 4 HOH 31 2031 2031 HOH HOH B . E 4 HOH 32 2032 2032 HOH HOH B . E 4 HOH 33 2033 2033 HOH HOH B . F 4 HOH 1 2001 2001 HOH HOH C . F 4 HOH 2 2002 2002 HOH HOH C . F 4 HOH 3 2003 2003 HOH HOH C . F 4 HOH 4 2004 2004 HOH HOH C . F 4 HOH 5 2005 2005 HOH HOH C . F 4 HOH 6 2006 2006 HOH HOH C . F 4 HOH 7 2007 2007 HOH HOH C . F 4 HOH 8 2008 2008 HOH HOH C . F 4 HOH 9 2009 2009 HOH HOH C . F 4 HOH 10 2010 2010 HOH HOH C . F 4 HOH 11 2011 2011 HOH HOH C . F 4 HOH 12 2012 2012 HOH HOH C . F 4 HOH 13 2013 2013 HOH HOH C . F 4 HOH 14 2014 2014 HOH HOH C . F 4 HOH 15 2015 2015 HOH HOH C . F 4 HOH 16 2016 2016 HOH HOH C . F 4 HOH 17 2017 2017 HOH HOH C . F 4 HOH 18 2018 2018 HOH HOH C . F 4 HOH 19 2019 2019 HOH HOH C . F 4 HOH 20 2020 2020 HOH HOH C . F 4 HOH 21 2021 2021 HOH HOH C . F 4 HOH 22 2022 2022 HOH HOH C . F 4 HOH 23 2023 2023 HOH HOH C . F 4 HOH 24 2024 2024 HOH HOH C . F 4 HOH 25 2025 2025 HOH HOH C . F 4 HOH 26 2026 2026 HOH HOH C . F 4 HOH 27 2027 2027 HOH HOH C . F 4 HOH 28 2028 2028 HOH HOH C . F 4 HOH 29 2029 2029 HOH HOH C . F 4 HOH 30 2030 2030 HOH HOH C . F 4 HOH 31 2031 2031 HOH HOH C . F 4 HOH 32 2032 2032 HOH HOH C . F 4 HOH 33 2033 2033 HOH HOH C . F 4 HOH 34 2034 2034 HOH HOH C . F 4 HOH 35 2035 2035 HOH HOH C . F 4 HOH 36 2036 2036 HOH HOH C . F 4 HOH 37 2037 2037 HOH HOH C . F 4 HOH 38 2038 2038 HOH HOH C . F 4 HOH 39 2039 2039 HOH HOH C . F 4 HOH 40 2040 2040 HOH HOH C . F 4 HOH 41 2041 2041 HOH HOH C . F 4 HOH 42 2042 2042 HOH HOH C . F 4 HOH 43 2043 2043 HOH HOH C . F 4 HOH 44 2044 2044 HOH HOH C . F 4 HOH 45 2045 2045 HOH HOH C . F 4 HOH 46 2046 2046 HOH HOH C . F 4 HOH 47 2047 2047 HOH HOH C . F 4 HOH 48 2048 2048 HOH HOH C . F 4 HOH 49 2049 2049 HOH HOH C . F 4 HOH 50 2050 2050 HOH HOH C . F 4 HOH 51 2051 2051 HOH HOH C . F 4 HOH 52 2052 2052 HOH HOH C . F 4 HOH 53 2053 2053 HOH HOH C . F 4 HOH 54 2054 2054 HOH HOH C . F 4 HOH 55 2055 2055 HOH HOH C . F 4 HOH 56 2056 2056 HOH HOH C . F 4 HOH 57 2057 2057 HOH HOH C . F 4 HOH 58 2058 2058 HOH HOH C . F 4 HOH 59 2059 2059 HOH HOH C . F 4 HOH 60 2060 2060 HOH HOH C . F 4 HOH 61 2061 2061 HOH HOH C . F 4 HOH 62 2062 2062 HOH HOH C . F 4 HOH 63 2063 2063 HOH HOH C . F 4 HOH 64 2064 2064 HOH HOH C . F 4 HOH 65 2065 2065 HOH HOH C . F 4 HOH 66 2066 2066 HOH HOH C . F 4 HOH 67 2067 2067 HOH HOH C . F 4 HOH 68 2068 2068 HOH HOH C . F 4 HOH 69 2069 2069 HOH HOH C . F 4 HOH 70 2070 2070 HOH HOH C . F 4 HOH 71 2071 2071 HOH HOH C . F 4 HOH 72 2072 2072 HOH HOH C . F 4 HOH 73 2073 2073 HOH HOH C . F 4 HOH 74 2074 2074 HOH HOH C . F 4 HOH 75 2075 2075 HOH HOH C . F 4 HOH 76 2076 2076 HOH HOH C . F 4 HOH 77 2077 2077 HOH HOH C . F 4 HOH 78 2078 2078 HOH HOH C . F 4 HOH 79 2079 2079 HOH HOH C . F 4 HOH 80 2080 2080 HOH HOH C . F 4 HOH 81 2081 2081 HOH HOH C . F 4 HOH 82 2082 2082 HOH HOH C . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 12540 ? 1 MORE -5.9 ? 1 'SSA (A^2)' 19660 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'point symmetry operation' ? ? -1.000000 0.000000 0.000000 46.650000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 -1.000000 0.000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id DA _pdbx_struct_special_symmetry.auth_seq_id 211 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id A _pdbx_struct_special_symmetry.label_comp_id DA _pdbx_struct_special_symmetry.label_seq_id 11 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2001-11-10 2 'Structure model' 1 1 2012-11-14 3 'Structure model' 1 2 2018-03-07 4 'Structure model' 1 3 2019-07-24 5 'Structure model' 1 4 2023-12-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 2 'Structure model' 'Derived calculations' 3 2 'Structure model' 'Non-polymer description' 4 2 'Structure model' Other 5 2 'Structure model' 'Refinement description' 6 2 'Structure model' 'Source and taxonomy' 7 2 'Structure model' 'Structure summary' 8 2 'Structure model' 'Version format compliance' 9 3 'Structure model' 'Source and taxonomy' 10 4 'Structure model' 'Data collection' 11 4 'Structure model' 'Derived calculations' 12 5 'Structure model' 'Data collection' 13 5 'Structure model' 'Database references' 14 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' entity_src_gen 2 3 'Structure model' pdbx_entity_src_syn 3 4 'Structure model' diffrn_source 4 4 'Structure model' pdbx_struct_special_symmetry 5 5 'Structure model' chem_comp_atom 6 5 'Structure model' chem_comp_bond 7 5 'Structure model' database_2 8 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_entity_src_gen.gene_src_common_name' 2 3 'Structure model' '_entity_src_gen.pdbx_gene_src_scientific_name' 3 3 'Structure model' '_entity_src_gen.pdbx_host_org_scientific_name' 4 3 'Structure model' '_entity_src_gen.pdbx_host_org_strain' 5 4 'Structure model' '_diffrn_source.pdbx_synchrotron_site' 6 5 'Structure model' '_database_2.pdbx_DOI' 7 5 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal _software.date _software.type _software.location _software.language CNS refinement 0.9 ? 1 ? ? ? ? DENZO 'data reduction' . ? 2 ? ? ? ? SCALEPACK 'data scaling' . ? 3 ? ? ? ? AMoRE phasing . ? 4 ? ? ? ? # _pdbx_entry_details.entry_id 1E3O _pdbx_entry_details.compound_details 'CHAIN C ENGINEERED MUTATION CYS61SER CYS150SER' _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O3'" A DA 201 ? ? P A DT 202 ? ? OP2 A DT 202 ? ? 123.81 110.50 13.31 1.10 Y 2 1 "O3'" B DT 207 ? ? P B DG 208 ? ? OP2 B DG 208 ? ? 118.55 110.50 8.05 1.10 Y 3 1 "O3'" B DA 210 ? ? P B DT 211 ? ? OP2 B DT 211 ? ? 117.67 110.50 7.17 1.10 Y 4 1 CA C LEU 9 ? ? CB C LEU 9 ? ? CG C LEU 9 ? ? 129.50 115.30 14.20 2.30 N # _pdbx_distant_solvent_atoms.id 1 _pdbx_distant_solvent_atoms.PDB_model_num 1 _pdbx_distant_solvent_atoms.auth_atom_id O _pdbx_distant_solvent_atoms.label_alt_id ? _pdbx_distant_solvent_atoms.auth_asym_id C _pdbx_distant_solvent_atoms.auth_comp_id HOH _pdbx_distant_solvent_atoms.auth_seq_id 2082 _pdbx_distant_solvent_atoms.PDB_ins_code ? _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 6.05 _pdbx_distant_solvent_atoms.neighbor_ligand_distance . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A DA 201 ? "O5'" ? A DA 1 "O5'" 2 1 Y 1 A DA 211 ? P ? A DA 11 P 3 1 Y 1 A DA 211 ? OP1 ? A DA 11 OP1 4 1 Y 1 A DA 211 ? OP2 ? A DA 11 OP2 5 1 Y 1 C GLU 1 ? CG ? C GLU 1 CG 6 1 Y 1 C GLU 1 ? CD ? C GLU 1 CD 7 1 Y 1 C GLU 1 ? OE1 ? C GLU 1 OE1 8 1 Y 1 C GLU 1 ? OE2 ? C GLU 1 OE2 9 1 Y 1 C LYS 22 ? CG ? C LYS 22 CG 10 1 Y 1 C LYS 22 ? CD ? C LYS 22 CD 11 1 Y 1 C LYS 22 ? CE ? C LYS 22 CE 12 1 Y 1 C LYS 22 ? NZ ? C LYS 22 NZ 13 1 Y 1 C LYS 104 ? CG ? C LYS 104 CG 14 1 Y 1 C LYS 104 ? CD ? C LYS 104 CD 15 1 Y 1 C LYS 104 ? CE ? C LYS 104 CE 16 1 Y 1 C LYS 104 ? NZ ? C LYS 104 NZ 17 1 Y 1 C LYS 118 ? CG ? C LYS 118 CG 18 1 Y 1 C LYS 118 ? CD ? C LYS 118 CD 19 1 Y 1 C LYS 118 ? CE ? C LYS 118 CE 20 1 Y 1 C LYS 118 ? NZ ? C LYS 118 NZ 21 1 Y 1 C MET 121 ? CG ? C MET 121 CG 22 1 Y 1 C MET 121 ? SD ? C MET 121 SD 23 1 Y 1 C MET 121 ? CE ? C MET 121 CE 24 1 Y 1 C LYS 125 ? CG ? C LYS 125 CG 25 1 Y 1 C LYS 125 ? CD ? C LYS 125 CD 26 1 Y 1 C LYS 125 ? CE ? C LYS 125 CE 27 1 Y 1 C LYS 125 ? NZ ? C LYS 125 NZ 28 1 Y 1 C GLU 129 ? CG ? C GLU 129 CG 29 1 Y 1 C GLU 129 ? CD ? C GLU 129 CD 30 1 Y 1 C GLU 129 ? OE1 ? C GLU 129 OE1 31 1 Y 1 C GLU 129 ? OE2 ? C GLU 129 OE2 32 1 Y 1 C LEU 133 ? CG ? C LEU 133 CG 33 1 Y 1 C LEU 133 ? CD1 ? C LEU 133 CD1 34 1 Y 1 C LEU 133 ? CD2 ? C LEU 133 CD2 35 1 Y 1 C GLU 136 ? CG ? C GLU 136 CG 36 1 Y 1 C GLU 136 ? CD ? C GLU 136 CD 37 1 Y 1 C GLU 136 ? OE1 ? C GLU 136 OE1 38 1 Y 1 C GLU 136 ? OE2 ? C GLU 136 OE2 39 1 Y 1 C LYS 142 ? CG ? C LYS 142 CG 40 1 Y 1 C LYS 142 ? CD ? C LYS 142 CD 41 1 Y 1 C LYS 142 ? CE ? C LYS 142 CE 42 1 Y 1 C LYS 142 ? NZ ? C LYS 142 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 C ALA 76 ? C ALA 76 2 1 Y 1 C ASN 77 ? C ASN 77 3 1 Y 1 C LEU 78 ? C LEU 78 4 1 Y 1 C SER 79 ? C SER 79 5 1 Y 1 C SER 80 ? C SER 80 6 1 Y 1 C ASP 81 ? C ASP 81 7 1 Y 1 C SER 82 ? C SER 82 8 1 Y 1 C SER 83 ? C SER 83 9 1 Y 1 C LEU 84 ? C LEU 84 10 1 Y 1 C SER 85 ? C SER 85 11 1 Y 1 C SER 86 ? C SER 86 12 1 Y 1 C PRO 87 ? C PRO 87 13 1 Y 1 C SER 88 ? C SER 88 14 1 Y 1 C ALA 89 ? C ALA 89 15 1 Y 1 C LEU 90 ? C LEU 90 16 1 Y 1 C ASN 91 ? C ASN 91 17 1 Y 1 C SER 92 ? C SER 92 18 1 Y 1 C PRO 93 ? C PRO 93 19 1 Y 1 C GLY 94 ? C GLY 94 20 1 Y 1 C ILE 95 ? C ILE 95 21 1 Y 1 C GLU 96 ? C GLU 96 22 1 Y 1 C GLY 97 ? C GLY 97 23 1 Y 1 C LEU 98 ? C LEU 98 24 1 Y 1 C SER 99 ? C SER 99 25 1 Y 1 C ARG 100 ? C ARG 100 26 1 Y 1 C ARG 101 ? C ARG 101 27 1 Y 1 C ARG 102 ? C ARG 102 28 1 Y 1 C LYS 103 ? C LYS 103 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 GLN N N N N 231 GLN CA C N S 232 GLN C C N N 233 GLN O O N N 234 GLN CB C N N 235 GLN CG C N N 236 GLN CD C N N 237 GLN OE1 O N N 238 GLN NE2 N N N 239 GLN OXT O N N 240 GLN H H N N 241 GLN H2 H N N 242 GLN HA H N N 243 GLN HB2 H N N 244 GLN HB3 H N N 245 GLN HG2 H N N 246 GLN HG3 H N N 247 GLN HE21 H N N 248 GLN HE22 H N N 249 GLN HXT H N N 250 GLU N N N N 251 GLU CA C N S 252 GLU C C N N 253 GLU O O N N 254 GLU CB C N N 255 GLU CG C N N 256 GLU CD C N N 257 GLU OE1 O N N 258 GLU OE2 O N N 259 GLU OXT O N N 260 GLU H H N N 261 GLU H2 H N N 262 GLU HA H N N 263 GLU HB2 H N N 264 GLU HB3 H N N 265 GLU HG2 H N N 266 GLU HG3 H N N 267 GLU HE2 H N N 268 GLU HXT H N N 269 GLY N N N N 270 GLY CA C N N 271 GLY C C N N 272 GLY O O N N 273 GLY OXT O N N 274 GLY H H N N 275 GLY H2 H N N 276 GLY HA2 H N N 277 GLY HA3 H N N 278 GLY HXT H N N 279 HOH O O N N 280 HOH H1 H N N 281 HOH H2 H N N 282 ILE N N N N 283 ILE CA C N S 284 ILE C C N N 285 ILE O O N N 286 ILE CB C N S 287 ILE CG1 C N N 288 ILE CG2 C N N 289 ILE CD1 C N N 290 ILE OXT O N N 291 ILE H H N N 292 ILE H2 H N N 293 ILE HA H N N 294 ILE HB H N N 295 ILE HG12 H N N 296 ILE HG13 H N N 297 ILE HG21 H N N 298 ILE HG22 H N N 299 ILE HG23 H N N 300 ILE HD11 H N N 301 ILE HD12 H N N 302 ILE HD13 H N N 303 ILE HXT H N N 304 LEU N N N N 305 LEU CA C N S 306 LEU C C N N 307 LEU O O N N 308 LEU CB C N N 309 LEU CG C N N 310 LEU CD1 C N N 311 LEU CD2 C N N 312 LEU OXT O N N 313 LEU H H N N 314 LEU H2 H N N 315 LEU HA H N N 316 LEU HB2 H N N 317 LEU HB3 H N N 318 LEU HG H N N 319 LEU HD11 H N N 320 LEU HD12 H N N 321 LEU HD13 H N N 322 LEU HD21 H N N 323 LEU HD22 H N N 324 LEU HD23 H N N 325 LEU HXT H N N 326 LYS N N N N 327 LYS CA C N S 328 LYS C C N N 329 LYS O O N N 330 LYS CB C N N 331 LYS CG C N N 332 LYS CD C N N 333 LYS CE C N N 334 LYS NZ N N N 335 LYS OXT O N N 336 LYS H H N N 337 LYS H2 H N N 338 LYS HA H N N 339 LYS HB2 H N N 340 LYS HB3 H N N 341 LYS HG2 H N N 342 LYS HG3 H N N 343 LYS HD2 H N N 344 LYS HD3 H N N 345 LYS HE2 H N N 346 LYS HE3 H N N 347 LYS HZ1 H N N 348 LYS HZ2 H N N 349 LYS HZ3 H N N 350 LYS HXT H N N 351 MET N N N N 352 MET CA C N S 353 MET C C N N 354 MET O O N N 355 MET CB C N N 356 MET CG C N N 357 MET SD S N N 358 MET CE C N N 359 MET OXT O N N 360 MET H H N N 361 MET H2 H N N 362 MET HA H N N 363 MET HB2 H N N 364 MET HB3 H N N 365 MET HG2 H N N 366 MET HG3 H N N 367 MET HE1 H N N 368 MET HE2 H N N 369 MET HE3 H N N 370 MET HXT H N N 371 PHE N N N N 372 PHE CA C N S 373 PHE C C N N 374 PHE O O N N 375 PHE CB C N N 376 PHE CG C Y N 377 PHE CD1 C Y N 378 PHE CD2 C Y N 379 PHE CE1 C Y N 380 PHE CE2 C Y N 381 PHE CZ C Y N 382 PHE OXT O N N 383 PHE H H N N 384 PHE H2 H N N 385 PHE HA H N N 386 PHE HB2 H N N 387 PHE HB3 H N N 388 PHE HD1 H N N 389 PHE HD2 H N N 390 PHE HE1 H N N 391 PHE HE2 H N N 392 PHE HZ H N N 393 PHE HXT H N N 394 PRO N N N N 395 PRO CA C N S 396 PRO C C N N 397 PRO O O N N 398 PRO CB C N N 399 PRO CG C N N 400 PRO CD C N N 401 PRO OXT O N N 402 PRO H H N N 403 PRO HA H N N 404 PRO HB2 H N N 405 PRO HB3 H N N 406 PRO HG2 H N N 407 PRO HG3 H N N 408 PRO HD2 H N N 409 PRO HD3 H N N 410 PRO HXT H N N 411 SER N N N N 412 SER CA C N S 413 SER C C N N 414 SER O O N N 415 SER CB C N N 416 SER OG O N N 417 SER OXT O N N 418 SER H H N N 419 SER H2 H N N 420 SER HA H N N 421 SER HB2 H N N 422 SER HB3 H N N 423 SER HG H N N 424 SER HXT H N N 425 THR N N N N 426 THR CA C N S 427 THR C C N N 428 THR O O N N 429 THR CB C N R 430 THR OG1 O N N 431 THR CG2 C N N 432 THR OXT O N N 433 THR H H N N 434 THR H2 H N N 435 THR HA H N N 436 THR HB H N N 437 THR HG1 H N N 438 THR HG21 H N N 439 THR HG22 H N N 440 THR HG23 H N N 441 THR HXT H N N 442 TRP N N N N 443 TRP CA C N S 444 TRP C C N N 445 TRP O O N N 446 TRP CB C N N 447 TRP CG C Y N 448 TRP CD1 C Y N 449 TRP CD2 C Y N 450 TRP NE1 N Y N 451 TRP CE2 C Y N 452 TRP CE3 C Y N 453 TRP CZ2 C Y N 454 TRP CZ3 C Y N 455 TRP CH2 C Y N 456 TRP OXT O N N 457 TRP H H N N 458 TRP H2 H N N 459 TRP HA H N N 460 TRP HB2 H N N 461 TRP HB3 H N N 462 TRP HD1 H N N 463 TRP HE1 H N N 464 TRP HE3 H N N 465 TRP HZ2 H N N 466 TRP HZ3 H N N 467 TRP HH2 H N N 468 TRP HXT H N N 469 TYR N N N N 470 TYR CA C N S 471 TYR C C N N 472 TYR O O N N 473 TYR CB C N N 474 TYR CG C Y N 475 TYR CD1 C Y N 476 TYR CD2 C Y N 477 TYR CE1 C Y N 478 TYR CE2 C Y N 479 TYR CZ C Y N 480 TYR OH O N N 481 TYR OXT O N N 482 TYR H H N N 483 TYR H2 H N N 484 TYR HA H N N 485 TYR HB2 H N N 486 TYR HB3 H N N 487 TYR HD1 H N N 488 TYR HD2 H N N 489 TYR HE1 H N N 490 TYR HE2 H N N 491 TYR HH H N N 492 TYR HXT H N N 493 VAL N N N N 494 VAL CA C N S 495 VAL C C N N 496 VAL O O N N 497 VAL CB C N N 498 VAL CG1 C N N 499 VAL CG2 C N N 500 VAL OXT O N N 501 VAL H H N N 502 VAL H2 H N N 503 VAL HA H N N 504 VAL HB H N N 505 VAL HG11 H N N 506 VAL HG12 H N N 507 VAL HG13 H N N 508 VAL HG21 H N N 509 VAL HG22 H N N 510 VAL HG23 H N N 511 VAL HXT H N N 512 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLU N CA sing N N 251 GLU N H sing N N 252 GLU N H2 sing N N 253 GLU CA C sing N N 254 GLU CA CB sing N N 255 GLU CA HA sing N N 256 GLU C O doub N N 257 GLU C OXT sing N N 258 GLU CB CG sing N N 259 GLU CB HB2 sing N N 260 GLU CB HB3 sing N N 261 GLU CG CD sing N N 262 GLU CG HG2 sing N N 263 GLU CG HG3 sing N N 264 GLU CD OE1 doub N N 265 GLU CD OE2 sing N N 266 GLU OE2 HE2 sing N N 267 GLU OXT HXT sing N N 268 GLY N CA sing N N 269 GLY N H sing N N 270 GLY N H2 sing N N 271 GLY CA C sing N N 272 GLY CA HA2 sing N N 273 GLY CA HA3 sing N N 274 GLY C O doub N N 275 GLY C OXT sing N N 276 GLY OXT HXT sing N N 277 HOH O H1 sing N N 278 HOH O H2 sing N N 279 ILE N CA sing N N 280 ILE N H sing N N 281 ILE N H2 sing N N 282 ILE CA C sing N N 283 ILE CA CB sing N N 284 ILE CA HA sing N N 285 ILE C O doub N N 286 ILE C OXT sing N N 287 ILE CB CG1 sing N N 288 ILE CB CG2 sing N N 289 ILE CB HB sing N N 290 ILE CG1 CD1 sing N N 291 ILE CG1 HG12 sing N N 292 ILE CG1 HG13 sing N N 293 ILE CG2 HG21 sing N N 294 ILE CG2 HG22 sing N N 295 ILE CG2 HG23 sing N N 296 ILE CD1 HD11 sing N N 297 ILE CD1 HD12 sing N N 298 ILE CD1 HD13 sing N N 299 ILE OXT HXT sing N N 300 LEU N CA sing N N 301 LEU N H sing N N 302 LEU N H2 sing N N 303 LEU CA C sing N N 304 LEU CA CB sing N N 305 LEU CA HA sing N N 306 LEU C O doub N N 307 LEU C OXT sing N N 308 LEU CB CG sing N N 309 LEU CB HB2 sing N N 310 LEU CB HB3 sing N N 311 LEU CG CD1 sing N N 312 LEU CG CD2 sing N N 313 LEU CG HG sing N N 314 LEU CD1 HD11 sing N N 315 LEU CD1 HD12 sing N N 316 LEU CD1 HD13 sing N N 317 LEU CD2 HD21 sing N N 318 LEU CD2 HD22 sing N N 319 LEU CD2 HD23 sing N N 320 LEU OXT HXT sing N N 321 LYS N CA sing N N 322 LYS N H sing N N 323 LYS N H2 sing N N 324 LYS CA C sing N N 325 LYS CA CB sing N N 326 LYS CA HA sing N N 327 LYS C O doub N N 328 LYS C OXT sing N N 329 LYS CB CG sing N N 330 LYS CB HB2 sing N N 331 LYS CB HB3 sing N N 332 LYS CG CD sing N N 333 LYS CG HG2 sing N N 334 LYS CG HG3 sing N N 335 LYS CD CE sing N N 336 LYS CD HD2 sing N N 337 LYS CD HD3 sing N N 338 LYS CE NZ sing N N 339 LYS CE HE2 sing N N 340 LYS CE HE3 sing N N 341 LYS NZ HZ1 sing N N 342 LYS NZ HZ2 sing N N 343 LYS NZ HZ3 sing N N 344 LYS OXT HXT sing N N 345 MET N CA sing N N 346 MET N H sing N N 347 MET N H2 sing N N 348 MET CA C sing N N 349 MET CA CB sing N N 350 MET CA HA sing N N 351 MET C O doub N N 352 MET C OXT sing N N 353 MET CB CG sing N N 354 MET CB HB2 sing N N 355 MET CB HB3 sing N N 356 MET CG SD sing N N 357 MET CG HG2 sing N N 358 MET CG HG3 sing N N 359 MET SD CE sing N N 360 MET CE HE1 sing N N 361 MET CE HE2 sing N N 362 MET CE HE3 sing N N 363 MET OXT HXT sing N N 364 PHE N CA sing N N 365 PHE N H sing N N 366 PHE N H2 sing N N 367 PHE CA C sing N N 368 PHE CA CB sing N N 369 PHE CA HA sing N N 370 PHE C O doub N N 371 PHE C OXT sing N N 372 PHE CB CG sing N N 373 PHE CB HB2 sing N N 374 PHE CB HB3 sing N N 375 PHE CG CD1 doub Y N 376 PHE CG CD2 sing Y N 377 PHE CD1 CE1 sing Y N 378 PHE CD1 HD1 sing N N 379 PHE CD2 CE2 doub Y N 380 PHE CD2 HD2 sing N N 381 PHE CE1 CZ doub Y N 382 PHE CE1 HE1 sing N N 383 PHE CE2 CZ sing Y N 384 PHE CE2 HE2 sing N N 385 PHE CZ HZ sing N N 386 PHE OXT HXT sing N N 387 PRO N CA sing N N 388 PRO N CD sing N N 389 PRO N H sing N N 390 PRO CA C sing N N 391 PRO CA CB sing N N 392 PRO CA HA sing N N 393 PRO C O doub N N 394 PRO C OXT sing N N 395 PRO CB CG sing N N 396 PRO CB HB2 sing N N 397 PRO CB HB3 sing N N 398 PRO CG CD sing N N 399 PRO CG HG2 sing N N 400 PRO CG HG3 sing N N 401 PRO CD HD2 sing N N 402 PRO CD HD3 sing N N 403 PRO OXT HXT sing N N 404 SER N CA sing N N 405 SER N H sing N N 406 SER N H2 sing N N 407 SER CA C sing N N 408 SER CA CB sing N N 409 SER CA HA sing N N 410 SER C O doub N N 411 SER C OXT sing N N 412 SER CB OG sing N N 413 SER CB HB2 sing N N 414 SER CB HB3 sing N N 415 SER OG HG sing N N 416 SER OXT HXT sing N N 417 THR N CA sing N N 418 THR N H sing N N 419 THR N H2 sing N N 420 THR CA C sing N N 421 THR CA CB sing N N 422 THR CA HA sing N N 423 THR C O doub N N 424 THR C OXT sing N N 425 THR CB OG1 sing N N 426 THR CB CG2 sing N N 427 THR CB HB sing N N 428 THR OG1 HG1 sing N N 429 THR CG2 HG21 sing N N 430 THR CG2 HG22 sing N N 431 THR CG2 HG23 sing N N 432 THR OXT HXT sing N N 433 TRP N CA sing N N 434 TRP N H sing N N 435 TRP N H2 sing N N 436 TRP CA C sing N N 437 TRP CA CB sing N N 438 TRP CA HA sing N N 439 TRP C O doub N N 440 TRP C OXT sing N N 441 TRP CB CG sing N N 442 TRP CB HB2 sing N N 443 TRP CB HB3 sing N N 444 TRP CG CD1 doub Y N 445 TRP CG CD2 sing Y N 446 TRP CD1 NE1 sing Y N 447 TRP CD1 HD1 sing N N 448 TRP CD2 CE2 doub Y N 449 TRP CD2 CE3 sing Y N 450 TRP NE1 CE2 sing Y N 451 TRP NE1 HE1 sing N N 452 TRP CE2 CZ2 sing Y N 453 TRP CE3 CZ3 doub Y N 454 TRP CE3 HE3 sing N N 455 TRP CZ2 CH2 doub Y N 456 TRP CZ2 HZ2 sing N N 457 TRP CZ3 CH2 sing Y N 458 TRP CZ3 HZ3 sing N N 459 TRP CH2 HH2 sing N N 460 TRP OXT HXT sing N N 461 TYR N CA sing N N 462 TYR N H sing N N 463 TYR N H2 sing N N 464 TYR CA C sing N N 465 TYR CA CB sing N N 466 TYR CA HA sing N N 467 TYR C O doub N N 468 TYR C OXT sing N N 469 TYR CB CG sing N N 470 TYR CB HB2 sing N N 471 TYR CB HB3 sing N N 472 TYR CG CD1 doub Y N 473 TYR CG CD2 sing Y N 474 TYR CD1 CE1 sing Y N 475 TYR CD1 HD1 sing N N 476 TYR CD2 CE2 doub Y N 477 TYR CD2 HD2 sing N N 478 TYR CE1 CZ doub Y N 479 TYR CE1 HE1 sing N N 480 TYR CE2 CZ sing Y N 481 TYR CE2 HE2 sing N N 482 TYR CZ OH sing N N 483 TYR OH HH sing N N 484 TYR OXT HXT sing N N 485 VAL N CA sing N N 486 VAL N H sing N N 487 VAL N H2 sing N N 488 VAL CA C sing N N 489 VAL CA CB sing N N 490 VAL CA HA sing N N 491 VAL C O doub N N 492 VAL C OXT sing N N 493 VAL CB CG1 sing N N 494 VAL CB CG2 sing N N 495 VAL CB HB sing N N 496 VAL CG1 HG11 sing N N 497 VAL CG1 HG12 sing N N 498 VAL CG1 HG13 sing N N 499 VAL CG2 HG21 sing N N 500 VAL CG2 HG22 sing N N 501 VAL CG2 HG23 sing N N 502 VAL OXT HXT sing N N 503 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1E3O 'double helix' 1E3O 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DA 1 1_555 B DT 11 1_555 -0.007 -0.186 0.018 -3.173 -9.074 5.616 1 A_DA201:DT211_B A 201 ? B 211 ? 20 1 1 A DT 2 1_555 B DA 10 1_555 0.038 -0.201 0.166 -3.235 -10.543 1.590 2 A_DT202:DA210_B A 202 ? B 210 ? 20 1 1 A DG 3 1_555 B DC 9 1_555 -0.089 -0.255 -0.028 -14.309 -21.908 -3.936 3 A_DG203:DC209_B A 203 ? B 209 ? 19 1 1 A DC 4 1_555 B DG 8 1_555 0.194 -0.193 -0.094 -10.357 6.980 -1.799 4 A_DC204:DG208_B A 204 ? B 208 ? 19 1 1 A DA 5 1_555 B DT 7 1_555 -0.084 -0.166 0.003 -4.845 -4.308 5.424 5 A_DA205:DT207_B A 205 ? B 207 ? 20 1 1 A DT 6 1_555 B DA 6 1_555 -0.055 -0.099 -0.255 3.059 -5.867 -0.053 6 A_DT206:DA206_B A 206 ? B 206 ? 20 1 1 A DG 7 1_555 B DC 5 1_555 0.069 -0.026 0.024 5.255 -5.485 6.119 7 A_DG207:DC205_B A 207 ? B 205 ? 19 1 1 A DA 8 1_555 B DT 4 1_555 0.461 -0.114 -0.119 0.456 -12.532 0.100 8 A_DA208:DT204_B A 208 ? B 204 ? 20 1 1 A DG 9 1_555 B DC 3 1_555 0.454 -0.506 -0.123 0.810 -11.911 -7.285 9 A_DG209:DC203_B A 209 ? B 203 ? 19 1 1 A DG 10 1_555 B DC 2 1_555 -0.018 -0.336 -0.315 -12.319 -4.072 -1.366 10 A_DG210:DC202_B A 210 ? B 202 ? 19 1 1 A DA 11 1_555 B DT 1 1_555 0.212 -0.096 0.301 -6.028 -6.859 7.815 11 A_DA211:DT201_B A 211 ? B 201 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DA 1 1_555 B DT 11 1_555 A DT 2 1_555 B DA 10 1_555 -0.380 -0.447 3.307 -0.792 3.923 28.350 -1.795 0.589 3.226 7.958 1.608 28.626 1 AA_DA201DT202:DA210DT211_BB A 201 ? B 211 ? A 202 ? B 210 ? 1 A DT 2 1_555 B DA 10 1_555 A DG 3 1_555 B DC 9 1_555 -1.465 0.701 3.549 -1.986 2.253 40.847 0.730 1.854 3.645 3.222 2.841 40.953 2 AA_DT202DG203:DC209DA210_BB A 202 ? B 210 ? A 203 ? B 209 ? 1 A DG 3 1_555 B DC 9 1_555 A DC 4 1_555 B DG 8 1_555 0.883 0.632 3.308 -2.315 -6.565 40.688 1.597 -1.500 3.121 -9.358 3.300 41.254 3 AA_DG203DC204:DG208DC209_BB A 203 ? B 209 ? A 204 ? B 208 ? 1 A DC 4 1_555 B DG 8 1_555 A DA 5 1_555 B DT 7 1_555 0.539 -0.943 3.227 0.869 2.787 29.609 -2.406 -0.873 3.142 5.436 -1.696 29.750 4 AA_DC204DA205:DT207DG208_BB A 204 ? B 208 ? A 205 ? B 207 ? 1 A DA 5 1_555 B DT 7 1_555 A DT 6 1_555 B DA 6 1_555 -0.892 -0.582 3.131 2.432 2.422 28.689 -1.672 2.295 2.989 4.866 -4.885 28.889 5 AA_DA205DT206:DA206DT207_BB A 205 ? B 207 ? A 206 ? B 206 ? 1 A DT 6 1_555 B DA 6 1_555 A DG 7 1_555 B DC 5 1_555 0.329 0.264 3.302 -2.360 6.523 32.711 -0.635 -0.967 3.261 11.422 4.132 33.419 6 AA_DT206DG207:DC205DA206_BB A 206 ? B 206 ? A 207 ? B 205 ? 1 A DG 7 1_555 B DC 5 1_555 A DA 8 1_555 B DT 4 1_555 -0.858 0.333 3.405 -0.172 5.922 38.238 -0.260 1.273 3.421 8.974 0.260 38.677 7 AA_DG207DA208:DT204DC205_BB A 207 ? B 205 ? A 208 ? B 204 ? 1 A DA 8 1_555 B DT 4 1_555 A DG 9 1_555 B DC 3 1_555 -0.061 -0.263 3.325 -1.530 9.235 33.420 -1.871 -0.135 3.144 15.680 2.597 34.670 8 AA_DA208DG209:DC203DT204_BB A 208 ? B 204 ? A 209 ? B 203 ? 1 A DG 9 1_555 B DC 3 1_555 A DG 10 1_555 B DC 2 1_555 0.633 -0.387 3.653 3.652 3.429 33.837 -1.266 -0.429 3.644 5.851 -6.231 34.195 9 AA_DG209DG210:DC202DC203_BB A 209 ? B 203 ? A 210 ? B 202 ? 1 A DG 10 1_555 B DC 2 1_555 A DA 11 1_555 B DT 1 1_555 -0.205 -0.677 3.083 -5.680 0.213 37.383 -1.071 -0.376 3.077 0.330 8.799 37.797 10 AA_DG210DA211:DT201DC202_BB A 210 ? B 202 ? A 211 ? B 201 ? # _pdbx_entity_nonpoly.entity_id 4 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1OCT _pdbx_initial_refinement_model.details ? #