HEADER APOPTOSIS 26-JUN-00 1E3Y TITLE DEATH DOMAIN FROM HUMAN FADD/MORT1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: FADD PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: DEATH DOMAIN RESIDUES 93-192; COMPND 5 SYNONYM: FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: T7; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET14B; SOURCE 10 OTHER_DETAILS: PCR CLONING INTO N-TERMINAL 6*HIS TAG SOURCE 11 THROMBIN-CLEAVABLE FUSION PROTEIN KEYWDS APOPTOSIS, DEATH DOMAIN, ADAPTER MOLECULE, FAS RECEPTOR KEYWDS 2 DEATH INDUCING SIGNALLING COMPLEX EXPDTA SOLUTION NMR MDLTYP MINIMIZED AVERAGE AUTHOR P.C.DRISCOLL,H.BERGLUND,D.OLERENSHAW,N.Q.MCDONALD REVDAT 2 24-FEB-09 1E3Y 1 VERSN REVDAT 1 06-NOV-00 1E3Y 0 JRNL AUTH H.BERGLUND,D.OLERENSHAW,A.SANKAR,M.FEDERWISCH, JRNL AUTH 2 N.Q.MCDONALD,P.C.DRISCOLL JRNL TITL THE THREE-DIMENSIONAL SOLUTION STRUCTURE AND JRNL TITL 2 DYNAMIC PROPERTIES OF THE HUMAN FADD DEATH DOMAIN JRNL REF J.MOL.BIOL. V. 302 171 2000 JRNL REFN ISSN 0022-2836 JRNL PMID 10964568 JRNL DOI 10.1006/JMBI.2000.4011 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.851 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REFINEMENT DETAILS CAN BE FOUND IN REMARK 3 THE JRNL CITATION ABOVE. REMARK 4 REMARK 4 1E3Y COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 27-JUN-00. REMARK 100 THE PDBE ID CODE IS EBI-5098. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.2 REMARK 210 IONIC STRENGTH : 50 MM PHOSPHATE BUFFER, REMARK 210 150MM NACL REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : NULL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : VARIOUS DOUBLE; TRIPLE REMARK 210 RESONANCES EXPERIMENTS REMARK 210 SPECTROMETER FIELD STRENGTH : 600 REMARK 210 SPECTROMETER MODEL : UNITYPLUS 600 REMARK 210 SPECTROMETER MANUFACTURER : VARIAN NMR INC. REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE, ANSIG, X-PLOR REMARK 210 METHOD USED : SIMULATED ANNEALING FROM REMARK 210 RANDOM CHAIN STARTING CONFORMERS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 1 REMARK 210 CONFORMERS, SELECTION CRITERIA : LEAST RESTRAINT VIOLATION REMARK 210 AND GOOD NON-BONDED CONTACTS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE REMARK 210 NMR SPECTROSCOPY ON 13C, 15N-LABELED FADD-DD. FULL REMARK 210 DETAILS ARE GIVEN IN BERGLUND ET AL., J. MOL. BIOL. REMARK 210 (2000), IN PRESS REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 400 REMARK 400 COMPOUND REMARK 400 CHIAN A EXTRA GLY-SER-HIS-MET- AT N-TERMINUS REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLU A 95 - H LEU A 97 1.43 REMARK 500 O TRP A 112 - H ALA A 116 1.44 REMARK 500 O LYS A 125 - H ILE A 129 1.57 REMARK 500 O SER A 144 - H ILE A 147 1.44 REMARK 500 O ARG A 184 - H ASN A 188 1.55 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 90 105.57 -166.37 REMARK 500 GLU A 94 32.57 -91.28 REMARK 500 GLU A 95 152.47 -40.99 REMARK 500 ASP A 96 -58.50 62.16 REMARK 500 LYS A 110 20.08 -173.02 REMARK 500 LYS A 120 40.60 102.81 REMARK 500 LEU A 145 -55.36 -27.54 REMARK 500 TRP A 148 -58.08 -27.08 REMARK 500 LYS A 153 -65.23 -27.44 REMARK 500 ALA A 156 40.67 -104.88 REMARK 500 ARG A 189 -140.82 37.43 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 113 0.15 SIDE CHAIN REMARK 500 ARG A 114 0.20 SIDE CHAIN REMARK 500 ARG A 117 0.32 SIDE CHAIN REMARK 500 ARG A 132 0.32 SIDE CHAIN REMARK 500 ARG A 135 0.19 SIDE CHAIN REMARK 500 ARG A 140 0.11 SIDE CHAIN REMARK 500 ARG A 142 0.28 SIDE CHAIN REMARK 500 ARG A 146 0.21 SIDE CHAIN REMARK 500 ARG A 166 0.30 SIDE CHAIN REMARK 500 ARG A 184 0.22 SIDE CHAIN REMARK 500 ARG A 189 0.26 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ID: 1A1W RELATED DB: PDB REMARK 900 FADD DEATH EFFECTOR DOMAIN, F25Y MUTANT, NMR MINIMIZED REMARK 900 AVERAGE STRUCTURE REMARK 900 RELATED ID: 1A1Z RELATED DB: PDB REMARK 900 FADD DEATH EFFECTOR DOMAIN, F25G MUTANT, NMR MINIMIZED REMARK 900 AVERAGE STRUCTURE REMARK 900 RELATED ID: 1E41 RELATED DB: PDB REMARK 900 DEATH DOMAIN FROM HUMAN FADD/MORT1 DBREF 1E3Y A 89 92 PDB 1E3Y 1E3Y 89 92 DBREF 1E3Y A 93 192 UNP Q13158 FADD_HUMAN 93 192 SEQRES 1 A 104 GLY SER HIS MET GLY GLU GLU ASP LEU CYS ALA ALA PHE SEQRES 2 A 104 ASN VAL ILE CYS ASP ASN VAL GLY LYS ASP TRP ARG ARG SEQRES 3 A 104 LEU ALA ARG GLN LEU LYS VAL SER ASP THR LYS ILE ASP SEQRES 4 A 104 SER ILE GLU ASP ARG TYR PRO ARG ASN LEU THR GLU ARG SEQRES 5 A 104 VAL ARG GLU SER LEU ARG ILE TRP LYS ASN THR GLU LYS SEQRES 6 A 104 GLU ASN ALA THR VAL ALA HIS LEU VAL GLY ALA LEU ARG SEQRES 7 A 104 SER CYS GLN MET ASN LEU VAL ALA ASP LEU VAL GLN GLU SEQRES 8 A 104 VAL GLN GLN ALA ARG ASP LEU GLN ASN ARG SER GLY ALA HELIX 1 1 ASP A 96 ASN A 107 1 12 HELIX 2 2 ASP A 111 VAL A 121 1 11 HELIX 3 3 SER A 122 TYR A 133 1 12 HELIX 4 4 ASN A 136 LYS A 153 1 18 HELIX 5 5 THR A 157 CYS A 168 1 12 HELIX 6 6 MET A 170 ASN A 188 1 19 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000