HEADER APOPTOSIS 27-JUN-00 1E41 TITLE DEATH DOMAIN FROM HUMAN FADD/MORT1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: FADD PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: DEATH DOMAIN RESIDUES 93-192; COMPND 5 SYNONYM: FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: T7; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET14B; SOURCE 10 OTHER_DETAILS: PCR CLONING INTO N-TERMINAL 6*HIS TAG THROMBIN- SOURCE 11 CLEAVABLE FUSION PROTEIN KEYWDS APOPTOSIS, DEATH DOMAIN, ADAPTER MOLECULE, FAS RECEPTOR DEATH KEYWDS 2 INDUCING SIGNALLING COMPLEX EXPDTA SOLUTION NMR NUMMDL 25 AUTHOR P.C.DRISCOLL,H.BERGLUND,D.OLERENSHAW,N.Q.MCDONALD REVDAT 4 15-MAY-24 1E41 1 REMARK REVDAT 3 24-FEB-09 1E41 1 VERSN REVDAT 2 03-MAY-05 1E41 1 ATOM REVDAT 1 06-NOV-00 1E41 0 JRNL AUTH H.BERGLUND,D.OLERENSHAW,A.SANKAR,M.FEDERWISCH,N.Q.MCDONALD, JRNL AUTH 2 P.C.DRISCOLL JRNL TITL THE THREE-DIMENSIONAL SOLUTION STRUCTURE AND DYNAMIC JRNL TITL 2 PROPERTIES OF THE HUMAN FADD DEATH DOMAIN JRNL REF J.MOL.BIOL. V. 302 171 2000 JRNL REFN ISSN 0022-2836 JRNL PMID 10964568 JRNL DOI 10.1006/JMBI.2000.4011 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.851 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REFINEMENT DETAILS CAN BE FOUND IN THE REMARK 3 JRNL CITATION ABOVE. REMARK 4 REMARK 4 1E41 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 27-JUN-00. REMARK 100 THE DEPOSITION ID IS D_1290004758. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.2 REMARK 210 IONIC STRENGTH : 50 MM PHOSPHATE BUFFER, 150MM REMARK 210 NACL REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : NULL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : VARIOUS DOUBLE; TRIPLE REMARK 210 RESONANCES EXPERIMENTS REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : UNITYPLUS REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE, ANSIG, X-PLOR REMARK 210 METHOD USED : SIMULATED ANNEALING FROM RANDOM REMARK 210 CHAIN STARTING CONFORMERS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 25 REMARK 210 CONFORMERS, SELECTION CRITERIA : LEAST RESTRAINT VIOLATION AND REMARK 210 GOOD NON-BONDED CONTACTS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE NMR REMARK 210 SPECTROSCOPY ON 13C, 15N-LABELED FADD-DD. FULL DETAILS ARE GIVEN REMARK 210 IN BERGLUND ET AL., J. MOL. BIOL. (2000), IN PRESS REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 CHIAN A EXTRA GLY-SER-HIS-MET- AT N-TERMINUS REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLU A 95 H CYS A 98 1.19 REMARK 500 O TYR A 133 HH21 ARG A 140 1.51 REMARK 500 O SER A 144 H ILE A 147 1.53 REMARK 500 O TRP A 112 H ALA A 116 1.57 REMARK 500 O ASN A 171 H ASP A 175 1.60 REMARK 500 O GLU A 95 N CYS A 98 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 HIS A 91 -70.24 -95.85 REMARK 500 1 GLU A 95 -139.28 -91.19 REMARK 500 1 ASP A 96 -42.70 -22.67 REMARK 500 1 VAL A 108 -170.84 41.42 REMARK 500 1 LYS A 120 40.92 105.88 REMARK 500 1 ASN A 136 84.52 -163.54 REMARK 500 1 LEU A 145 -44.66 -29.92 REMARK 500 1 TRP A 148 -67.04 -26.31 REMARK 500 1 LYS A 153 -71.52 -27.78 REMARK 500 1 ALA A 156 40.21 -102.77 REMARK 500 1 MET A 170 62.53 -114.34 REMARK 500 1 ARG A 189 95.47 49.11 REMARK 500 1 SER A 190 75.34 -159.77 REMARK 500 2 SER A 90 157.40 60.25 REMARK 500 2 HIS A 91 130.13 -174.96 REMARK 500 2 ASP A 96 -54.95 64.79 REMARK 500 2 VAL A 108 174.88 -45.51 REMARK 500 2 LYS A 110 11.28 -159.34 REMARK 500 2 LYS A 120 42.80 89.76 REMARK 500 2 ASN A 136 86.99 178.43 REMARK 500 2 LEU A 145 -44.12 -29.58 REMARK 500 2 TRP A 148 -68.29 -27.00 REMARK 500 2 THR A 151 -62.47 -92.86 REMARK 500 2 LYS A 153 -49.22 -28.55 REMARK 500 2 ALA A 156 59.20 -109.78 REMARK 500 2 MET A 170 60.31 -111.53 REMARK 500 2 ASN A 188 24.18 43.25 REMARK 500 2 ARG A 189 41.34 30.37 REMARK 500 2 SER A 190 84.05 -163.57 REMARK 500 3 MET A 92 -142.13 52.32 REMARK 500 3 GLU A 95 -137.82 -91.42 REMARK 500 3 ASP A 96 -43.04 -18.57 REMARK 500 3 VAL A 108 179.31 -49.16 REMARK 500 3 LYS A 110 -6.63 -177.80 REMARK 500 3 LYS A 120 38.48 103.03 REMARK 500 3 ARG A 135 38.66 93.28 REMARK 500 3 ASN A 136 67.13 -155.49 REMARK 500 3 LEU A 145 -44.98 -28.72 REMARK 500 3 TRP A 148 -63.33 -25.52 REMARK 500 3 LYS A 153 -52.72 -28.63 REMARK 500 3 ALA A 183 -73.31 -90.18 REMARK 500 3 ASN A 188 15.12 58.32 REMARK 500 3 SER A 190 154.30 -46.94 REMARK 500 4 HIS A 91 -72.77 -49.99 REMARK 500 4 MET A 92 73.61 53.27 REMARK 500 4 GLU A 94 30.98 -90.60 REMARK 500 4 ASP A 96 -53.45 68.23 REMARK 500 4 ASN A 107 34.91 -95.02 REMARK 500 4 VAL A 108 4.97 -60.77 REMARK 500 4 LYS A 110 18.71 -148.55 REMARK 500 REMARK 500 THIS ENTRY HAS 359 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 1 ARG A 113 0.29 SIDE CHAIN REMARK 500 1 ARG A 114 0.27 SIDE CHAIN REMARK 500 1 ARG A 117 0.28 SIDE CHAIN REMARK 500 1 ARG A 132 0.31 SIDE CHAIN REMARK 500 1 ARG A 135 0.11 SIDE CHAIN REMARK 500 1 ARG A 142 0.30 SIDE CHAIN REMARK 500 1 ARG A 146 0.30 SIDE CHAIN REMARK 500 1 ARG A 166 0.27 SIDE CHAIN REMARK 500 1 ARG A 184 0.30 SIDE CHAIN REMARK 500 1 ARG A 189 0.27 SIDE CHAIN REMARK 500 2 ARG A 113 0.27 SIDE CHAIN REMARK 500 2 ARG A 114 0.32 SIDE CHAIN REMARK 500 2 ARG A 117 0.20 SIDE CHAIN REMARK 500 2 ARG A 132 0.31 SIDE CHAIN REMARK 500 2 ARG A 135 0.09 SIDE CHAIN REMARK 500 2 ARG A 140 0.18 SIDE CHAIN REMARK 500 2 ARG A 142 0.16 SIDE CHAIN REMARK 500 2 ARG A 146 0.28 SIDE CHAIN REMARK 500 2 ARG A 166 0.09 SIDE CHAIN REMARK 500 2 ARG A 184 0.11 SIDE CHAIN REMARK 500 2 ARG A 189 0.29 SIDE CHAIN REMARK 500 3 ARG A 113 0.29 SIDE CHAIN REMARK 500 3 ARG A 114 0.31 SIDE CHAIN REMARK 500 3 ARG A 117 0.26 SIDE CHAIN REMARK 500 3 ARG A 132 0.11 SIDE CHAIN REMARK 500 3 ARG A 140 0.22 SIDE CHAIN REMARK 500 3 ARG A 142 0.26 SIDE CHAIN REMARK 500 3 ARG A 146 0.31 SIDE CHAIN REMARK 500 3 ARG A 166 0.18 SIDE CHAIN REMARK 500 3 ARG A 184 0.24 SIDE CHAIN REMARK 500 3 ARG A 189 0.31 SIDE CHAIN REMARK 500 4 ARG A 113 0.27 SIDE CHAIN REMARK 500 4 ARG A 114 0.31 SIDE CHAIN REMARK 500 4 ARG A 117 0.19 SIDE CHAIN REMARK 500 4 ARG A 132 0.32 SIDE CHAIN REMARK 500 4 ARG A 135 0.32 SIDE CHAIN REMARK 500 4 ARG A 140 0.17 SIDE CHAIN REMARK 500 4 ARG A 142 0.23 SIDE CHAIN REMARK 500 4 ARG A 146 0.11 SIDE CHAIN REMARK 500 4 ARG A 166 0.16 SIDE CHAIN REMARK 500 4 ARG A 184 0.10 SIDE CHAIN REMARK 500 4 ARG A 189 0.10 SIDE CHAIN REMARK 500 5 ARG A 113 0.32 SIDE CHAIN REMARK 500 5 ARG A 114 0.31 SIDE CHAIN REMARK 500 5 ARG A 117 0.29 SIDE CHAIN REMARK 500 5 ARG A 132 0.20 SIDE CHAIN REMARK 500 5 ARG A 135 0.16 SIDE CHAIN REMARK 500 5 ARG A 140 0.18 SIDE CHAIN REMARK 500 5 ARG A 142 0.29 SIDE CHAIN REMARK 500 5 ARG A 146 0.30 SIDE CHAIN REMARK 500 REMARK 500 THIS ENTRY HAS 260 PLANE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1A1W RELATED DB: PDB REMARK 900 FADD DEATH EFFECTOR DOMAIN, F25Y MUTANT, NMR MINIMIZED AVERAGE REMARK 900 STRUCTURE REMARK 900 RELATED ID: 1A1Z RELATED DB: PDB REMARK 900 FADD DEATH EFFECTOR DOMAIN, F25G MUTANT, NMR MINIMIZED AVERAGE REMARK 900 STRUCTURE REMARK 900 RELATED ID: 1E3Y RELATED DB: PDB REMARK 900 DEATH DOMAIN FROM HUMAN FADD/MORT1 DBREF 1E41 A 89 92 PDB 1E41 1E41 89 92 DBREF 1E41 A 93 192 UNP Q13158 FADD_HUMAN 93 192 SEQRES 1 A 104 GLY SER HIS MET GLY GLU GLU ASP LEU CYS ALA ALA PHE SEQRES 2 A 104 ASN VAL ILE CYS ASP ASN VAL GLY LYS ASP TRP ARG ARG SEQRES 3 A 104 LEU ALA ARG GLN LEU LYS VAL SER ASP THR LYS ILE ASP SEQRES 4 A 104 SER ILE GLU ASP ARG TYR PRO ARG ASN LEU THR GLU ARG SEQRES 5 A 104 VAL ARG GLU SER LEU ARG ILE TRP LYS ASN THR GLU LYS SEQRES 6 A 104 GLU ASN ALA THR VAL ALA HIS LEU VAL GLY ALA LEU ARG SEQRES 7 A 104 SER CYS GLN MET ASN LEU VAL ALA ASP LEU VAL GLN GLU SEQRES 8 A 104 VAL GLN GLN ALA ARG ASP LEU GLN ASN ARG SER GLY ALA HELIX 1 1 ASP A 96 ASN A 107 1 12 HELIX 2 2 ASP A 111 VAL A 121 1 11 HELIX 3 3 SER A 122 TYR A 133 1 12 HELIX 4 4 ASN A 136 LYS A 153 1 18 HELIX 5 5 GLU A 154 ALA A 156 5 3 HELIX 6 6 THR A 157 CYS A 168 1 12 HELIX 7 7 MET A 170 LEU A 186 1 17 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1