HEADER HYDROLASE 26-JUL-00 1E5J TITLE ENDOGLUCANASE CEL5A FROM BACILLUS AGARADHAERENS IN THE TETRAGONAL TITLE 2 CRYSTAL FORM IN COMPLEX WITH METHYL-4II-S-ALPHA-CELLOBIOSYL-4II-THIO- TITLE 3 BETA-CELLOBIOSIDE CAVEAT 1E5J SGC B 3 HAS WRONG CHIRALITY AT ATOM C1 GLC B 4 HAS WRONG CAVEAT 2 1E5J CHIRALITY AT ATOM C1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENDOGLUCANASE 5A; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: CATALYTIC CORE DOMAIN, RESIDUES 27-331; COMPND 5 SYNONYM: CELLULASE, ENDO-1,4-BETA-GLUCANASE, ALKALINE CELLULASE, COMPND 6 ENDO-1,4-BETA-GLUCANASE 5A; COMPND 7 EC: 3.2.1.4; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS AGARADHAERENS; SOURCE 3 ORGANISM_TAXID: 76935; SOURCE 4 STRAIN: AC13; SOURCE 5 EXPRESSION_SYSTEM: BACILLUS SUBTILIS; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 1423; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: PL2306; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: BACILLUS, CELLULASE NEGATIVE; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PMOL995; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: THERMAMYL-AMYLASE PROMOT KEYWDS HYDROLASE, CELLULOSE DEGRADATION, GLYCOSHYDROLASE FAMILY 5 EXPDTA X-RAY DIFFRACTION AUTHOR S.FORT,A.VARROT,M.SCHULEIN,S.COTTAZ,H.DRIGUEZ,G.J.DAVIES REVDAT 7 08-MAY-24 1E5J 1 HETSYN REVDAT 6 29-JUL-20 1E5J 1 CAVEAT COMPND REMARK HETNAM REVDAT 6 2 1 LINK SITE ATOM REVDAT 5 28-NOV-12 1E5J 1 TITLE COMPND SOURCE KEYWDS REVDAT 5 2 1 REMARK VERSN DBREF SEQADV REVDAT 5 3 1 FORMUL SITE REVDAT 4 24-FEB-09 1E5J 1 VERSN REVDAT 3 17-MAR-05 1E5J 1 JRNL REVDAT 2 24-JUN-03 1E5J 1 REMARK HET HETNAM FORMUL REVDAT 2 2 1 LINK HETATM CONECT REVDAT 1 26-JUL-01 1E5J 0 JRNL AUTH S.FORT,A.VARROT,M.SCHULEIN,S.COTTAZ,H.DRIGUEZ,G.J.DAVIES JRNL TITL MIXED-LINKAGE CELLOOLIGOSACCHARIDES: A NEW CLASS OF JRNL TITL 2 GLYCOSIDE HYDROLASE INHIBITORS JRNL REF CHEMBIOCHEM V. 2 319 2001 JRNL REFN ISSN 1439-4227 JRNL PMID 11828460 JRNL DOI 10.1002/1439-7633(20010504)2:5<319::AID-CBIC319>3.3.CO;2-H REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 15.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 31361 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.179 REMARK 3 R VALUE (WORKING SET) : 0.177 REMARK 3 FREE R VALUE : 0.222 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1676 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2388 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 50 REMARK 3 SOLVENT ATOMS : 328 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 23.32 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.14 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): NULL REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : 0.013 ; 0.020 REMARK 3 ANGLE DISTANCE (A) : 0.030 ; 0.040 REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : 0.033 ; 0.500 REMARK 3 H-BOND OR METAL COORDINATION (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : 0.025 ; 0.030 REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : 0.126 ; 0.150 REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : 0.180 ; 0.300 REMARK 3 MULTIPLE TORSION (A) : 0.248 ; 0.300 REMARK 3 H-BOND (X...Y) (A) : NULL ; NULL REMARK 3 H-BOND (X-H...Y) (A) : NULL ; NULL REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : 4.300 ; 7.000 REMARK 3 STAGGERED (DEGREES) : 11.800; 15.000 REMARK 3 TRANSVERSE (DEGREES) : 27.100; 20.000 REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 2.345 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.965 ; 5.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 3.331 ; 4.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 4.246 ; 6.000 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1E5J COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 26-JUL-00. REMARK 100 THE DEPOSITION ID IS D_1290005202. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-JAN-00 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 7.00 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU200 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : LONG MIRRORS (MSC) REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32666 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 15.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : 3.000 REMARK 200 R MERGE (I) : 0.04800 REMARK 200 R SYM (I) : 0.04800 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 19.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.92 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.5 REMARK 200 DATA REDUNDANCY IN SHELL : 3.00 REMARK 200 R MERGE FOR SHELL (I) : 0.26500 REMARK 200 R SYM FOR SHELL (I) : 0.26500 REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: OTHER REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.48 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN (20MGML-1) WAS CRYSTALLISED REMARK 280 FROM 28% PEG400 AS PRECIPITANT, 100MM HEPES AT PH 7.0 AS BUFFER REMARK 280 AND 200 MM CACL2. THE PROTEIN WAS INCUBATED WITH THE 1MM OF REMARK 280 SUBSTRATE FOR AN HOUR PRIOR TO COCRYSTALLISATIOM, PH 7.00 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 68.09650 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 37.26000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 37.26000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 102.14475 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 37.26000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 37.26000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 34.04825 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 37.26000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 37.26000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 102.14475 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 37.26000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 37.26000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 34.04825 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 68.09650 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 CATALYTIC ACTIVITY: ENDOHYDROLYSIS OF 1,4-BETA-D-GLUCOSIDIC REMARK 400 LINKAGES IN CELLULOSE. REMARK 400 SIMILARITY: BELONGS TO CELLULASE FAMILY A (FAMILY 5 OF GLYCOSYL REMARK 400 HYDROLASES). REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A 1 REMARK 465 ASN A 2 REMARK 465 ASP A 3 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 2036 O HOH A 2134 3554 0.00 REMARK 500 O HOH A 2001 O HOH A 2133 8665 0.00 REMARK 500 O HOH A 2015 O HOH A 2143 8665 0.00 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 75 CB - CG - OD2 ANGL. DEV. = -8.5 DEGREES REMARK 500 GLU A 121 OE1 - CD - OE2 ANGL. DEV. = -7.8 DEGREES REMARK 500 TYR A 134 CB - CG - CD2 ANGL. DEV. = -5.0 DEGREES REMARK 500 TYR A 134 CB - CG - CD1 ANGL. DEV. = 4.6 DEGREES REMARK 500 TYR A 202 CB - CG - CD1 ANGL. DEV. = -3.7 DEGREES REMARK 500 ARG A 211 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 22 10.42 -69.62 REMARK 500 LEU A 103 -77.44 -163.12 REMARK 500 ALA A 137 88.41 -162.71 REMARK 500 ASN A 138 -73.38 -36.66 REMARK 500 ASN A 188 63.35 -153.71 REMARK 500 ASN A 194 49.74 -101.87 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2008 DISTANCE = 6.92 ANGSTROMS REMARK 525 HOH A2015 DISTANCE = 5.99 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 404 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 75 OD2 REMARK 620 2 HOH A2046 O 134.0 REMARK 620 3 HOH A2089 O 101.3 124.6 REMARK 620 4 HOH A2100 O 96.3 86.7 82.5 REMARK 620 5 HOH A2103 O 70.5 76.4 139.2 137.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 403 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 120 OD2 REMARK 620 2 ASP A 120 OD1 52.8 REMARK 620 3 GLU A 124 OE2 84.3 97.3 REMARK 620 4 GLU A 124 OE2 120.0 165.1 68.0 REMARK 620 5 GLU A 124 OE1 145.4 142.2 114.5 52.0 REMARK 620 6 HOH A2157 O 67.8 118.4 91.2 61.2 82.4 REMARK 620 7 HOH A2160 O 129.5 81.1 82.2 99.1 83.4 160.2 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 402 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 127 O REMARK 620 2 ASP A 166 OD1 94.9 REMARK 620 3 ASN A 168 OD1 173.0 79.0 REMARK 620 4 ASN A 169 ND2 74.3 78.0 107.3 REMARK 620 5 HOH A2012 O 95.0 153.5 92.0 81.2 REMARK 620 6 HOH A2202 O 91.3 105.7 87.2 165.4 98.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 401 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 157 OE1 REMARK 620 2 ASP A 243 OD1 91.7 REMARK 620 3 ASP A 243 OD2 110.0 52.6 REMARK 620 4 HOH A2194 O 75.3 74.1 126.1 REMARK 620 5 HOH A2196 O 79.7 152.0 155.2 77.9 REMARK 620 6 HOH A2262 O 159.7 89.2 86.5 85.6 90.1 REMARK 620 7 HOH A2266 O 107.4 131.5 78.9 153.2 76.4 86.9 REMARK 620 N 1 2 3 4 5 6 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4A3H RELATED DB: PDB REMARK 900 2',4' DINITROPHENYL-2-DEOXY-2-FLURO-B-D-CELLOBIOSIDE COMPLEX OF THE REMARK 900 ENDOGLUCANASE CEL5A FROM BACILLUS AGARADHAERENS AT 1.6 A RESOLUTION REMARK 900 RELATED ID: 1QHZ RELATED DB: PDB REMARK 900 NATIVE TETRAGONAL STRUCTURE OF THE ENDOGLUCANASE CEL5A FROM REMARK 900 BACILLUS AGARADHAERENS REMARK 900 RELATED ID: 1QI0 RELATED DB: PDB REMARK 900 ENDOGLUCANASE CEL5A FROM BACILLUS AGARADHAERENS IN THE TETRAGONAL REMARK 900 CRYSTAL FORM IN COMPLEX WITH CELLOBIOSE REMARK 900 RELATED ID: 1QI2 RELATED DB: PDB REMARK 900 ENDOGLUCANASE CEL5A FROM BACILLUS AGARADHAERENS IN THE TETRAGONAL REMARK 900 CRYSTAL FORM IN COMPLEX WITH 2',4'-DINITROPHENYL 2-DEOXY-2-FLUORO-B- REMARK 900 D-CELLOTRIOSIDE REMARK 900 RELATED ID: 8A3H RELATED DB: PDB REMARK 900 CELLOBIOSE-DERIVED IMIDAZOLE COMPLEX OF THE ENDOGLUCANASE CEL5A REMARK 900 FROM BACILLUS AGARADHAERENS AT 0.97 A RESOLUTION REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE 26 FIRST RESIDUES ARE CLEAVED IN ORDER TO GET THE REMARK 999 MATURE PROTEIN. THE REAL NUMBERING BEGINS AT RESIDUE REMARK 999 27 WHICH IS 1 IN THIS ENTRY. THE FIRST 3 RESIDUES REMARK 999 OF THE CORE ARE TOO DISORDERED TO BE SEEN IN THE DENSITY REMARK 999 MAP. THE CORE DOMAIN CORRESPONDS TO RESIDUES 1-305. DBREF 1E5J A 1 305 UNP O85465 GUN5_BACAG 27 331 SEQRES 1 A 305 ASP ASN ASP SER VAL VAL GLU GLU HIS GLY GLN LEU SER SEQRES 2 A 305 ILE SER ASN GLY GLU LEU VAL ASN GLU ARG GLY GLU GLN SEQRES 3 A 305 VAL GLN LEU LYS GLY MET SER SER HIS GLY LEU GLN TRP SEQRES 4 A 305 TYR GLY GLN PHE VAL ASN TYR GLU SER MET LYS TRP LEU SEQRES 5 A 305 ARG ASP ASP TRP GLY ILE ASN VAL PHE ARG ALA ALA MET SEQRES 6 A 305 TYR THR SER SER GLY GLY TYR ILE ASP ASP PRO SER VAL SEQRES 7 A 305 LYS GLU LYS VAL LYS GLU ALA VAL GLU ALA ALA ILE ASP SEQRES 8 A 305 LEU ASP ILE TYR VAL ILE ILE ASP TRP HIS ILE LEU SER SEQRES 9 A 305 ASP ASN ASP PRO ASN ILE TYR LYS GLU GLU ALA LYS ASP SEQRES 10 A 305 PHE PHE ASP GLU MET SER GLU LEU TYR GLY ASP TYR PRO SEQRES 11 A 305 ASN VAL ILE TYR GLU ILE ALA ASN GLU PRO ASN GLY SER SEQRES 12 A 305 ASP VAL THR TRP GLY ASN GLN ILE LYS PRO TYR ALA GLU SEQRES 13 A 305 GLU VAL ILE PRO ILE ILE ARG ASN ASN ASP PRO ASN ASN SEQRES 14 A 305 ILE ILE ILE VAL GLY THR GLY THR TRP SER GLN ASP VAL SEQRES 15 A 305 HIS HIS ALA ALA ASP ASN GLN LEU ALA ASP PRO ASN VAL SEQRES 16 A 305 MET TYR ALA PHE HIS PHE TYR ALA GLY THR HIS GLY GLN SEQRES 17 A 305 ASN LEU ARG ASP GLN VAL ASP TYR ALA LEU ASP GLN GLY SEQRES 18 A 305 ALA ALA ILE PHE VAL SER GLU TRP GLY THR SER ALA ALA SEQRES 19 A 305 THR GLY ASP GLY GLY VAL PHE LEU ASP GLU ALA GLN VAL SEQRES 20 A 305 TRP ILE ASP PHE MET ASP GLU ARG ASN LEU SER TRP ALA SEQRES 21 A 305 ASN TRP SER LEU THR HIS LYS ASP GLU SER SER ALA ALA SEQRES 22 A 305 LEU MET PRO GLY ALA ASN PRO THR GLY GLY TRP THR GLU SEQRES 23 A 305 ALA GLU LEU SER PRO SER GLY THR PHE VAL ARG GLU LYS SEQRES 24 A 305 ILE ARG GLU SER ALA SER HET MGL B 1 13 HET SGC B 2 11 HET SGC B 3 11 HET GLC B 4 11 HET CA A 401 1 HET CA A 402 1 HET CA A 403 1 HET CA A 404 1 HETNAM MGL METHYL BETA-D-GLUCOPYRANOSIDE HETNAM SGC 4-THIO-BETA-D-GLUCOPYRANOSE HETNAM GLC ALPHA-D-GLUCOPYRANOSE HETNAM CA CALCIUM ION HETSYN MGL O1-METHYL-GLUCOSE; METHYL BETA-D-GLUCOSIDE; METHYL D- HETSYN 2 MGL GLUCOSIDE; METHYL GLUCOSIDE HETSYN SGC 4-DEOXY-4-THIO-BETA-D-GLUCOPYRANOSE; 4-THIO-BETA-D- HETSYN 2 SGC GLUCOSE; 4-THIO-D-GLUCOSE; 4-THIO-GLUCOSE HETSYN GLC ALPHA-D-GLUCOSE; D-GLUCOSE; GLUCOSE FORMUL 2 MGL C7 H14 O6 FORMUL 2 SGC 2(C6 H12 O5 S) FORMUL 2 GLC C6 H12 O6 FORMUL 3 CA 4(CA 2+) FORMUL 7 HOH *328(H2 O) HELIX 1 1 SER A 4 GLY A 10 1 7 HELIX 2 2 GLY A 36 GLY A 41 1 6 HELIX 3 3 GLN A 42 VAL A 44 5 3 HELIX 4 4 ASN A 45 ASP A 55 1 11 HELIX 5 5 SER A 77 ASP A 93 1 17 HELIX 6 6 ASP A 107 ILE A 110 5 4 HELIX 7 7 TYR A 111 GLY A 127 1 17 HELIX 8 8 GLN A 150 ASP A 166 1 17 HELIX 9 9 THR A 175 GLN A 180 1 6 HELIX 10 10 ASP A 181 ASP A 187 1 7 HELIX 11 11 GLY A 207 GLN A 220 1 14 HELIX 12 12 PHE A 241 ARG A 255 1 15 HELIX 13 13 THR A 285 GLU A 288 5 4 HELIX 14 14 SER A 290 ALA A 304 1 15 SHEET 1 A 2 SER A 13 SER A 15 0 SHEET 2 A 2 GLU A 18 VAL A 20 -1 N VAL A 20 O SER A 13 SHEET 1 B 5 TRP A 259 ASN A 261 0 SHEET 2 B 5 LYS A 30 SER A 33 1 N GLY A 31 O TRP A 259 SHEET 3 B 5 VAL A 60 TYR A 66 1 N VAL A 60 O MET A 32 SHEET 4 B 5 TYR A 95 HIS A 101 1 N TYR A 95 O PHE A 61 SHEET 5 B 5 VAL A 132 GLU A 135 1 N ILE A 133 O VAL A 96 SHEET 1 C 2 ILE A 171 VAL A 173 0 SHEET 2 C 2 VAL A 195 TYR A 197 1 N MET A 196 O ILE A 171 SHEET 1 D 2 HIS A 200 TYR A 202 0 SHEET 2 D 2 GLU A 228 GLY A 230 1 N GLU A 228 O PHE A 201 LINK O4 MGL B 1 C1 SGC B 2 1555 1555 1.42 LINK S4 SGC B 2 C1 SGC B 3 1555 1555 1.78 LINK S4 SGC B 3 C1 GLC B 4 1555 1555 1.80 LINK OD2 ASP A 75 CA CA A 404 1555 1555 2.13 LINK OD2 ASP A 120 CA CA A 403 1555 1555 2.37 LINK OD1 ASP A 120 CA CA A 403 1555 1555 2.57 LINK OE2 GLU A 124 CA CA A 403 1555 1555 2.25 LINK OE2 GLU A 124 CA CA A 403 7465 1555 2.46 LINK OE1 GLU A 124 CA CA A 403 7465 1555 2.47 LINK O GLY A 127 CA CA A 402 1555 1555 2.15 LINK OE1 GLU A 157 CA CA A 401 1555 1555 2.23 LINK OD1 ASP A 166 CA CA A 402 1555 1555 2.43 LINK OD1 ASN A 168 CA CA A 402 1555 1555 2.22 LINK ND2 ASN A 169 CA CA A 402 1555 1555 3.35 LINK OD1 ASP A 243 CA CA A 401 3554 1555 2.48 LINK OD2 ASP A 243 CA CA A 401 3554 1555 2.46 LINK CA CA A 401 O HOH A2194 1555 1555 2.26 LINK CA CA A 401 O HOH A2196 1555 1555 2.32 LINK CA CA A 401 O HOH A2262 1555 3554 2.09 LINK CA CA A 401 O HOH A2266 1555 3554 2.15 LINK CA CA A 402 O HOH A2012 1555 1555 2.51 LINK CA CA A 402 O HOH A2202 1555 1555 2.42 LINK CA CA A 403 O HOH A2157 1555 7465 3.33 LINK CA CA A 403 O HOH A2160 1555 1555 1.95 LINK CA CA A 404 O HOH A2046 1555 6465 2.11 LINK CA CA A 404 O HOH A2089 1555 1555 2.86 LINK CA CA A 404 O HOH A2100 1555 1555 2.37 LINK CA CA A 404 O HOH A2103 1555 1555 2.65 CISPEP 1 TRP A 262 SER A 263 0 5.02 CRYST1 74.520 74.520 136.193 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013419 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013419 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007342 0.00000