HEADER EUKARYOTIC TRANSCRIPTIONAL REGULATION 04-OCT-00 1E91 TITLE STRUCTURE OF THE COMPLEX OF THE MAD1-SIN3B INTERACTION DOMAINS COMPND MOL_ID: 1; COMPND 2 MOLECULE: PAIRED AMPHIPATHIC HELIX PROTEIN SIN3B; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: PAH2 DOMAIN; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: MAD PROTEIN (MAX DIMERIZER); COMPND 8 CHAIN: B; COMPND 9 FRAGMENT: SIN INTERACTION DOMAIN; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: SIN3B; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PGEX2T; SOURCE 11 EXPRESSION_SYSTEM_GENE: SIN3B; SOURCE 12 MOL_ID: 2; SOURCE 13 SYNTHETIC: YES; SOURCE 14 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 15 ORGANISM_COMMON: HUMAN; SOURCE 16 ORGANISM_TAXID: 9606 KEYWDS EUKARYOTIC TRANSCRIPTIONAL REGULATION, SIN3, PAH DOMAINS, MAD1, KEYWDS 2 PROTEIN-PROTEIN INTERACTIONS EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR C.A.E.M.SPRONK,M.TESSARI,A.M.KAAN,J.F.A.JANSEN,M.VERMEULEN, AUTHOR 2 H.G.STUNNENBERG,G.W.VUISTER REVDAT 4 17-JAN-18 1E91 1 SOURCE JRNL REVDAT 3 24-FEB-09 1E91 1 VERSN REVDAT 2 07-DEC-00 1E91 1 JRNL REVDAT 1 20-NOV-00 1E91 0 JRNL AUTH C.A.E.M.SPRONK,M.TESSARI,A.M.KAAN,J.F.A.JANSEN,M.VERMEULEN, JRNL AUTH 2 H.G.STUNNENBERG,G.W.VUISTER JRNL TITL THE MAD1-SIN3B INTERACTION INVOLVES A NOVEL HELICAL FOLD JRNL REF NAT.STRUCT.BIOL. V. 7 1100 2000 JRNL REFN ISSN 1072-8368 JRNL PMID 11101889 JRNL DOI 10.1038/81944 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER, A.T. ET AL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: STRUCTURES WERE REFINED USING THE REMARK 3 PROGRAM ARIA 1.0 (NILGES ET AL) FOR ITERATIVE NOE ASSIGNMENT. REMARK 4 REMARK 4 1E91 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 04-OCT-00. REMARK 100 THE DEPOSITION ID IS D_1290005397. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 293 REMARK 210 PH : 6.3 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : NULL REMARK 210 SAMPLE CONTENTS : NULL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 13C-NOESY-HSQC; 15N-NOESY-HSQC; REMARK 210 15N-HMQC-NOESY-HSQC; (13C- REMARK 210 FILTERED)-NOESY- (13C-EDITED)- REMARK 210 HSQC; HNCA; HNCO; HN(CO)CA; REMARK 210 CBCA(CO)NNH; HNCACB; (H)CCH- REMARK 210 TOCSY; (13C/15N-FILTERED)-NOESY; REMARK 210 (13C/15N-FILTERED)-TOCSY; HNHA; REMARK 210 HBHA(CBCACO)NNH REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ; 750 MHZ; 600 MHZ REMARK 210 SPECTROMETER MODEL : INOVA; DRX REMARK 210 SPECTROMETER MANUFACTURER : VARIAN; BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : ARIA ARIA REMARK 210 METHOD USED : SIMULATED ANNEALING, ITERATIVE REMARK 210 NOE-ASSIGNMENT REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : 30 STRUCTURES WITH NO RESTRAINT REMARK 210 VIOLATIONS, 20 LOWEST ENERGY REMARK 210 STRUCTURES FINALLY SELECTED REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASP A 3 46.66 -167.60 REMARK 500 1 PHE A 21 40.16 -93.29 REMARK 500 1 HIS A 24 78.53 -105.56 REMARK 500 1 GLU A 41 47.71 -80.36 REMARK 500 1 GLN A 42 -47.08 -142.31 REMARK 500 1 LEU A 43 -145.10 -70.67 REMARK 500 1 HIS A 44 45.57 70.86 REMARK 500 1 THR A 45 -133.22 51.37 REMARK 500 1 PHE A 50 51.63 -179.13 REMARK 500 1 SER A 54 -149.89 -158.75 REMARK 500 1 PHE A 66 42.23 -75.47 REMARK 500 1 GLU A 70 1.70 -63.46 REMARK 500 1 ALA A 83 -145.00 -75.99 REMARK 500 2 SER A 2 -52.20 -161.93 REMARK 500 2 PHE A 21 41.54 -93.70 REMARK 500 2 HIS A 24 78.56 -106.71 REMARK 500 2 HIS A 44 120.96 81.41 REMARK 500 2 THR A 45 -140.68 -66.48 REMARK 500 2 ARG A 51 59.29 -147.99 REMARK 500 2 SER A 54 -154.59 -161.10 REMARK 500 2 PHE A 66 42.25 -75.28 REMARK 500 2 GLN A 69 49.78 -84.15 REMARK 500 2 GLU A 70 6.32 -65.19 REMARK 500 2 LYS A 84 -60.56 -163.02 REMARK 500 3 PHE A 21 43.44 -95.52 REMARK 500 3 HIS A 24 77.51 -107.17 REMARK 500 3 GLU A 41 43.10 -80.17 REMARK 500 3 GLN A 42 -52.11 -152.23 REMARK 500 3 THR A 45 130.27 66.71 REMARK 500 3 LYS A 46 117.42 -177.29 REMARK 500 3 ARG A 51 43.19 -74.66 REMARK 500 3 SER A 54 -144.47 -169.31 REMARK 500 3 PHE A 66 41.19 -74.20 REMARK 500 3 GLU A 70 -5.54 -59.97 REMARK 500 3 ALA A 83 -50.44 -160.86 REMARK 500 3 LYS A 84 -150.71 -72.08 REMARK 500 4 SER A 2 130.23 57.76 REMARK 500 4 ASP A 3 -133.47 -70.86 REMARK 500 4 PHE A 21 38.89 -90.94 REMARK 500 4 HIS A 24 78.69 -105.42 REMARK 500 4 LEU A 43 -147.72 -63.84 REMARK 500 4 HIS A 44 142.11 -178.30 REMARK 500 4 PRO A 49 -160.89 -63.14 REMARK 500 4 PHE A 50 134.02 -173.21 REMARK 500 4 ARG A 51 36.90 -81.31 REMARK 500 4 SER A 54 -145.64 -162.05 REMARK 500 4 PHE A 66 37.47 -73.11 REMARK 500 4 GLN A 69 48.76 -78.04 REMARK 500 4 GLU A 82 -55.16 178.79 REMARK 500 4 LYS A 84 46.39 -175.37 REMARK 500 REMARK 500 THIS ENTRY HAS 246 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5457 RELATED DB: BMRB DBREF 1E91 A 1 85 UNP Q62141 Q62141 148 232 DBREF 1E91 B 1 13 UNP Q05195 MAD_HUMAN 8 20 SEQADV 1E91 ALA A 83 UNP Q62141 GLY 230 CONFLICT SEQRES 1 A 85 GLU SER ASP SER VAL GLU PHE ASN ASN ALA ILE SER TYR SEQRES 2 A 85 VAL ASN LYS ILE LYS THR ARG PHE LEU ASP HIS PRO GLU SEQRES 3 A 85 ILE TYR ARG SER PHE LEU GLU ILE LEU HIS THR TYR GLN SEQRES 4 A 85 LYS GLU GLN LEU HIS THR LYS GLY ARG PRO PHE ARG GLY SEQRES 5 A 85 MET SER GLU GLU GLU VAL PHE THR GLU VAL ALA ASN LEU SEQRES 6 A 85 PHE ARG GLY GLN GLU ASP LEU LEU SER GLU PHE GLY GLN SEQRES 7 A 85 PHE LEU PRO GLU ALA LYS ARG SEQRES 1 B 13 ASN ILE GLN MET LEU LEU GLU ALA ALA ASP TYR LEU GLU HELIX 1 1 SER A 4 PHE A 21 1 18 HELIX 2 2 HIS A 24 GLU A 41 1 18 HELIX 3 3 SER A 54 PHE A 66 1 13 HELIX 4 4 GLN A 69 LEU A 80 1 12 HELIX 5 5 ASN B 1 GLU B 13 1 13 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1