HEADER DNA REPAIR 10-JUL-01 1EA6 TITLE N-TERMINAL 40KDA FRAGMENT OF NHPMS2 COMPLEXED WITH ADP COMPND MOL_ID: 1; COMPND 2 MOLECULE: PMS1 PROTEIN HOMOLOG 2; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: N-TERMINAL 40KDA, RESIDUES 1-364; COMPND 5 SYNONYM: HPMS2, DNA MISMATCH REPAIR PROTEIN PMS2; COMPND 6 ENGINEERED: YES; COMPND 7 OTHER_DETAILS: NHPMS2 COMPLEXED WITH ADP SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PET15B KEYWDS DNA REPAIR, GHL ATPASE, HNPCC, MISMATCH REPAIR EXPDTA X-RAY DIFFRACTION AUTHOR A.GUARNE,M.S.JUNOP,W.YANG REVDAT 3 23-OCT-24 1EA6 1 LINK REVDAT 2 24-FEB-09 1EA6 1 VERSN REVDAT 1 23-NOV-01 1EA6 0 JRNL AUTH A.GUARNE,M.S.JUNOP,W.YANG JRNL TITL STRUCTURE AND FUNCTION OF THE N-TERMINAL 40 KDA FRAGMENT OF JRNL TITL 2 HUMAN PMS2: A MONOMERIC GHL ATPASE JRNL REF EMBO J. V. 20 5521 2001 JRNL REFN ISSN 0261-4189 JRNL PMID 11574484 JRNL DOI 10.1093/EMBOJ/20.19.5521 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 0.9 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.69 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 1647028.200 REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 92.4 REMARK 3 NUMBER OF REFLECTIONS : 19940 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.230 REMARK 3 FREE R VALUE : 0.262 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 6.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1371 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.007 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.87 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 92.00 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 3027 REMARK 3 BIN R VALUE (WORKING SET) : 0.3320 REMARK 3 BIN FREE R VALUE : 0.3810 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 6.70 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 217 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.026 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4708 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 56 REMARK 3 SOLVENT ATOMS : 50 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 54.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 50.70 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 7.17000 REMARK 3 B22 (A**2) : 6.53000 REMARK 3 B33 (A**2) : -13.70000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.35 REMARK 3 ESD FROM SIGMAA (A) : 0.48 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.42 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.54 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 1.600 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 24.60 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.990 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.620 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.820 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 2.340 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.630 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.31 REMARK 3 BSOL : 17.50 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : ADP.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : ION.TOP REMARK 3 TOPOLOGY FILE 4 : ADP.TOP REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1EA6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 10-JUL-01. REMARK 100 THE DEPOSITION ID IS D_1290008308. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-MAR-01 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 6.20 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NI FILTER REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19940 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 25.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.3 REMARK 200 DATA REDUNDANCY : 2.500 REMARK 200 R MERGE (I) : 0.06400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.7 REMARK 200 DATA REDUNDANCY IN SHELL : 2.20 REMARK 200 R MERGE FOR SHELL (I) : 0.30400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: OTHER REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.89 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.40 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2-2.4 M NA/K PHOSPHATE (PH 6.2) 0.2 M REMARK 280 LICL, PH 6.20 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 37.52150 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 67.64700 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 37.49150 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 67.64700 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 37.52150 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 37.49150 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 465 ARG A 3 REMARK 465 ALA A 4 REMARK 465 GLU A 5 REMARK 465 SER A 6 REMARK 465 SER A 7 REMARK 465 SER A 8 REMARK 465 THR A 9 REMARK 465 GLU A 10 REMARK 465 PRO A 11 REMARK 465 ALA A 12 REMARK 465 LYS A 13 REMARK 465 ALA A 14 REMARK 465 ILE A 15 REMARK 465 LYS A 16 REMARK 465 PRO A 17 REMARK 465 ILE A 18 REMARK 465 ASP A 19 REMARK 465 ARG A 20 REMARK 465 LYS A 21 REMARK 465 SER A 22 REMARK 465 VAL A 23 REMARK 465 HIS A 24 REMARK 465 GLN A 25 REMARK 465 ILE A 26 REMARK 465 LYS A 86 REMARK 465 HIS A 87 REMARK 465 HIS A 88 REMARK 465 THR A 89 REMARK 465 SER A 90 REMARK 465 LYS A 91 REMARK 465 ILE A 92 REMARK 465 GLN A 93 REMARK 465 GLU A 94 REMARK 465 PHE A 95 REMARK 465 ALA A 96 REMARK 465 ASP A 97 REMARK 465 LEU A 98 REMARK 465 THR A 99 REMARK 465 GLN A 100 REMARK 465 VAL A 101 REMARK 465 GLU A 102 REMARK 465 THR A 103 REMARK 465 PHE A 104 REMARK 465 GLY A 105 REMARK 465 PHE A 106 REMARK 465 ARG A 107 REMARK 465 GLY A 108 REMARK 465 ASP A 333 REMARK 465 ILE A 334 REMARK 465 ASN A 335 REMARK 465 VAL A 336 REMARK 465 THR A 337 REMARK 465 PRO A 338 REMARK 465 ASP A 339 REMARK 465 LYS A 340 REMARK 465 ARG A 341 REMARK 465 GLN A 342 REMARK 465 ILE A 343 REMARK 465 MET B 1 REMARK 465 GLU B 2 REMARK 465 ARG B 3 REMARK 465 ALA B 4 REMARK 465 GLU B 5 REMARK 465 SER B 6 REMARK 465 SER B 7 REMARK 465 SER B 8 REMARK 465 THR B 9 REMARK 465 GLU B 10 REMARK 465 PRO B 11 REMARK 465 ALA B 12 REMARK 465 LYS B 13 REMARK 465 ALA B 14 REMARK 465 ILE B 15 REMARK 465 LYS B 16 REMARK 465 PRO B 17 REMARK 465 ILE B 18 REMARK 465 ASP B 19 REMARK 465 ARG B 20 REMARK 465 LYS B 21 REMARK 465 SER B 22 REMARK 465 VAL B 23 REMARK 465 HIS B 24 REMARK 465 GLN B 25 REMARK 465 ILE B 26 REMARK 465 LYS B 86 REMARK 465 HIS B 87 REMARK 465 HIS B 88 REMARK 465 THR B 89 REMARK 465 SER B 90 REMARK 465 LYS B 91 REMARK 465 ILE B 92 REMARK 465 GLN B 93 REMARK 465 GLU B 94 REMARK 465 PHE B 95 REMARK 465 ALA B 96 REMARK 465 ASP B 97 REMARK 465 LEU B 98 REMARK 465 THR B 99 REMARK 465 GLN B 100 REMARK 465 VAL B 101 REMARK 465 GLU B 102 REMARK 465 THR B 103 REMARK 465 PHE B 104 REMARK 465 GLY B 105 REMARK 465 PHE B 106 REMARK 465 ARG B 107 REMARK 465 GLY B 108 REMARK 465 ILE B 334 REMARK 465 ASN B 335 REMARK 465 VAL B 336 REMARK 465 THR B 337 REMARK 465 PRO B 338 REMARK 465 ASP B 339 REMARK 465 LYS B 340 REMARK 465 ARG B 341 REMARK 465 GLN B 342 REMARK 465 ILE B 343 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLN B 30 N - CA - C ANGL. DEV. = -19.4 DEGREES REMARK 500 PRO B 213 C - N - CA ANGL. DEV. = 11.1 DEGREES REMARK 500 PRO B 213 C - N - CD ANGL. DEV. = -16.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 31 128.33 -32.81 REMARK 500 SER A 118 -179.37 -170.70 REMARK 500 ILE A 177 -49.67 -12.83 REMARK 500 ASN A 314 57.26 -156.76 REMARK 500 ARG A 315 -32.05 -36.90 REMARK 500 GLU A 347 79.47 -114.09 REMARK 500 SER B 28 76.15 -170.57 REMARK 500 PRO B 152 -178.10 -64.25 REMARK 500 SER B 195 47.75 -85.20 REMARK 500 PRO B 213 152.68 -49.62 REMARK 500 VAL B 214 -53.75 -131.97 REMARK 500 CYS B 216 110.07 -163.18 REMARK 500 GLN B 233 -8.52 -59.84 REMARK 500 THR B 285 31.51 -90.35 REMARK 500 CYS B 331 44.43 -106.22 REMARK 500 VAL B 332 -157.39 -148.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1365 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 45 OD1 REMARK 620 2 ADP A1366 O1B 82.9 REMARK 620 3 ADP A1366 O3B 135.4 57.1 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B1365 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN B 45 OD1 REMARK 620 2 ADP B1366 O1A 83.0 REMARK 620 3 ADP B1366 O3B 112.5 73.7 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A1365 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B1365 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP A1366 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP B1366 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1H7S RELATED DB: PDB REMARK 900 N-TERMINAL 40KDA FRAGMENT OF HUMAN PMS2 REMARK 900 RELATED ID: 1H7U RELATED DB: PDB REMARK 900 NHPMS2-ATPGS DBREF 1EA6 A 1 364 UNP P54278 PMS2_HUMAN 1 364 DBREF 1EA6 B 1 364 UNP P54278 PMS2_HUMAN 1 364 SEQRES 1 A 364 MET GLU ARG ALA GLU SER SER SER THR GLU PRO ALA LYS SEQRES 2 A 364 ALA ILE LYS PRO ILE ASP ARG LYS SER VAL HIS GLN ILE SEQRES 3 A 364 CYS SER GLY GLN VAL VAL LEU SER LEU SER THR ALA VAL SEQRES 4 A 364 LYS GLU LEU VAL GLU ASN SER LEU ASP ALA GLY ALA THR SEQRES 5 A 364 ASN ILE ASP LEU LYS LEU LYS ASP TYR GLY VAL ASP LEU SEQRES 6 A 364 ILE GLU VAL SER ASP ASN GLY CYS GLY VAL GLU GLU GLU SEQRES 7 A 364 ASN PHE GLU GLY LEU THR LEU LYS HIS HIS THR SER LYS SEQRES 8 A 364 ILE GLN GLU PHE ALA ASP LEU THR GLN VAL GLU THR PHE SEQRES 9 A 364 GLY PHE ARG GLY GLU ALA LEU SER SER LEU CYS ALA LEU SEQRES 10 A 364 SER ASP VAL THR ILE SER THR CYS HIS ALA SER ALA LYS SEQRES 11 A 364 VAL GLY THR ARG LEU MET PHE ASP HIS ASN GLY LYS ILE SEQRES 12 A 364 ILE GLN LYS THR PRO TYR PRO ARG PRO ARG GLY THR THR SEQRES 13 A 364 VAL SER VAL GLN GLN LEU PHE SER THR LEU PRO VAL ARG SEQRES 14 A 364 HIS LYS GLU PHE GLN ARG ASN ILE LYS LYS GLU TYR ALA SEQRES 15 A 364 LYS MET VAL GLN VAL LEU HIS ALA TYR CYS ILE ILE SER SEQRES 16 A 364 ALA GLY ILE ARG VAL SER CYS THR ASN GLN LEU GLY GLN SEQRES 17 A 364 GLY LYS ARG GLN PRO VAL VAL CYS THR GLY GLY SER PRO SEQRES 18 A 364 SER ILE LYS GLU ASN ILE GLY SER VAL PHE GLY GLN LYS SEQRES 19 A 364 GLN LEU GLN SER LEU ILE PRO PHE VAL GLN LEU PRO PRO SEQRES 20 A 364 SER ASP SER VAL CYS GLU GLU TYR GLY LEU SER CYS SER SEQRES 21 A 364 ASP ALA LEU HIS ASN LEU PHE TYR ILE SER GLY PHE ILE SEQRES 22 A 364 SER GLN CYS THR HIS GLY VAL GLY ARG SER SER THR ASP SEQRES 23 A 364 ARG GLN PHE PHE PHE ILE ASN ARG ARG PRO CYS ASP PRO SEQRES 24 A 364 ALA LYS VAL CYS ARG LEU VAL ASN GLU VAL TYR HIS MET SEQRES 25 A 364 TYR ASN ARG HIS GLN TYR PRO PHE VAL VAL LEU ASN ILE SEQRES 26 A 364 SER VAL ASP SER GLU CYS VAL ASP ILE ASN VAL THR PRO SEQRES 27 A 364 ASP LYS ARG GLN ILE LEU LEU GLN GLU GLU LYS LEU LEU SEQRES 28 A 364 LEU ALA VAL LEU LYS THR SER LEU ILE GLY MET PHE ASP SEQRES 1 B 364 MET GLU ARG ALA GLU SER SER SER THR GLU PRO ALA LYS SEQRES 2 B 364 ALA ILE LYS PRO ILE ASP ARG LYS SER VAL HIS GLN ILE SEQRES 3 B 364 CYS SER GLY GLN VAL VAL LEU SER LEU SER THR ALA VAL SEQRES 4 B 364 LYS GLU LEU VAL GLU ASN SER LEU ASP ALA GLY ALA THR SEQRES 5 B 364 ASN ILE ASP LEU LYS LEU LYS ASP TYR GLY VAL ASP LEU SEQRES 6 B 364 ILE GLU VAL SER ASP ASN GLY CYS GLY VAL GLU GLU GLU SEQRES 7 B 364 ASN PHE GLU GLY LEU THR LEU LYS HIS HIS THR SER LYS SEQRES 8 B 364 ILE GLN GLU PHE ALA ASP LEU THR GLN VAL GLU THR PHE SEQRES 9 B 364 GLY PHE ARG GLY GLU ALA LEU SER SER LEU CYS ALA LEU SEQRES 10 B 364 SER ASP VAL THR ILE SER THR CYS HIS ALA SER ALA LYS SEQRES 11 B 364 VAL GLY THR ARG LEU MET PHE ASP HIS ASN GLY LYS ILE SEQRES 12 B 364 ILE GLN LYS THR PRO TYR PRO ARG PRO ARG GLY THR THR SEQRES 13 B 364 VAL SER VAL GLN GLN LEU PHE SER THR LEU PRO VAL ARG SEQRES 14 B 364 HIS LYS GLU PHE GLN ARG ASN ILE LYS LYS GLU TYR ALA SEQRES 15 B 364 LYS MET VAL GLN VAL LEU HIS ALA TYR CYS ILE ILE SER SEQRES 16 B 364 ALA GLY ILE ARG VAL SER CYS THR ASN GLN LEU GLY GLN SEQRES 17 B 364 GLY LYS ARG GLN PRO VAL VAL CYS THR GLY GLY SER PRO SEQRES 18 B 364 SER ILE LYS GLU ASN ILE GLY SER VAL PHE GLY GLN LYS SEQRES 19 B 364 GLN LEU GLN SER LEU ILE PRO PHE VAL GLN LEU PRO PRO SEQRES 20 B 364 SER ASP SER VAL CYS GLU GLU TYR GLY LEU SER CYS SER SEQRES 21 B 364 ASP ALA LEU HIS ASN LEU PHE TYR ILE SER GLY PHE ILE SEQRES 22 B 364 SER GLN CYS THR HIS GLY VAL GLY ARG SER SER THR ASP SEQRES 23 B 364 ARG GLN PHE PHE PHE ILE ASN ARG ARG PRO CYS ASP PRO SEQRES 24 B 364 ALA LYS VAL CYS ARG LEU VAL ASN GLU VAL TYR HIS MET SEQRES 25 B 364 TYR ASN ARG HIS GLN TYR PRO PHE VAL VAL LEU ASN ILE SEQRES 26 B 364 SER VAL ASP SER GLU CYS VAL ASP ILE ASN VAL THR PRO SEQRES 27 B 364 ASP LYS ARG GLN ILE LEU LEU GLN GLU GLU LYS LEU LEU SEQRES 28 B 364 LEU ALA VAL LEU LYS THR SER LEU ILE GLY MET PHE ASP HET MG A1365 1 HET ADP A1366 27 HET MG B1365 1 HET ADP B1366 27 HETNAM MG MAGNESIUM ION HETNAM ADP ADENOSINE-5'-DIPHOSPHATE FORMUL 3 MG 2(MG 2+) FORMUL 4 ADP 2(C10 H15 N5 O10 P2) FORMUL 7 HOH *50(H2 O) HELIX 1 1 SER A 34 ALA A 49 1 16 HELIX 2 2 GLU A 109 SER A 118 1 10 HELIX 3 3 LEU A 166 ILE A 177 1 12 HELIX 4 4 ASN A 176 SER A 195 1 20 HELIX 5 5 SER A 222 GLY A 232 1 11 HELIX 6 6 GLY A 232 SER A 238 1 7 HELIX 7 7 SER A 248 TYR A 255 1 8 HELIX 8 8 SER A 258 LEU A 263 1 6 HELIX 9 9 PRO A 299 ARG A 315 1 17 HELIX 10 10 ASP A 328 VAL A 332 5 5 HELIX 11 11 GLU A 347 ASP A 364 1 18 HELIX 12 12 SER B 34 ALA B 49 1 16 HELIX 13 13 GLU B 76 PHE B 80 5 5 HELIX 14 14 GLU B 109 SER B 118 1 10 HELIX 15 15 LEU B 166 ASN B 176 1 11 HELIX 16 16 ASN B 176 SER B 195 1 20 HELIX 17 17 SER B 222 GLY B 232 1 11 HELIX 18 18 GLY B 232 GLN B 237 1 6 HELIX 19 19 SER B 248 TYR B 255 1 8 HELIX 20 20 SER B 258 LEU B 263 1 6 HELIX 21 21 SER B 284 ASP B 286 5 3 HELIX 22 22 PRO B 299 MET B 312 1 14 HELIX 23 23 GLU B 347 ASP B 364 1 18 SHEET 1 AA 8 ILE A 143 PRO A 148 0 SHEET 2 AA 8 THR A 133 PHE A 137 -1 O ARG A 134 N THR A 147 SHEET 3 AA 8 ASP A 119 CYS A 125 -1 O VAL A 120 N PHE A 137 SHEET 4 AA 8 GLY A 154 GLN A 160 -1 O GLY A 154 N CYS A 125 SHEET 5 AA 8 LEU A 65 ASP A 70 -1 O ILE A 66 N VAL A 159 SHEET 6 AA 8 ASN A 53 LYS A 59 -1 O ASP A 55 N SER A 69 SHEET 7 AA 8 ARG A 199 GLN A 205 1 O ARG A 199 N ILE A 54 SHEET 8 AA 8 ARG A 211 CYS A 216 -1 O GLN A 212 N ASN A 204 SHEET 1 AB 5 LEU A 239 PRO A 241 0 SHEET 2 AB 5 TYR A 268 SER A 274 -1 O ILE A 273 N ILE A 240 SHEET 3 AB 5 VAL A 321 SER A 326 -1 O VAL A 322 N PHE A 272 SHEET 4 AB 5 GLN A 288 ILE A 292 1 O PHE A 289 N LEU A 323 SHEET 5 AB 5 ARG A 295 CYS A 297 -1 O ARG A 295 N ILE A 292 SHEET 1 BA 8 ILE B 143 TYR B 149 0 SHEET 2 BA 8 GLY B 132 PHE B 137 -1 O GLY B 132 N TYR B 149 SHEET 3 BA 8 ASP B 119 CYS B 125 -1 O VAL B 120 N PHE B 137 SHEET 4 BA 8 GLY B 154 GLN B 160 -1 O GLY B 154 N CYS B 125 SHEET 5 BA 8 LEU B 65 ASP B 70 -1 O ILE B 66 N VAL B 159 SHEET 6 BA 8 ASN B 53 LYS B 59 -1 O ASP B 55 N SER B 69 SHEET 7 BA 8 ARG B 199 GLN B 205 1 O ARG B 199 N ILE B 54 SHEET 8 BA 8 ARG B 211 CYS B 216 -1 O GLN B 212 N ASN B 204 SHEET 1 BB 4 LEU B 239 PRO B 241 0 SHEET 2 BB 4 TYR B 268 SER B 274 -1 O ILE B 273 N ILE B 240 SHEET 3 BB 4 VAL B 321 SER B 326 -1 O VAL B 322 N PHE B 272 SHEET 4 BB 4 GLN B 288 ILE B 292 1 O PHE B 289 N LEU B 323 SSBOND 1 CYS A 27 CYS B 259 1555 2575 2.83 SSBOND 2 CYS A 259 CYS B 27 1555 2665 2.82 LINK OD1 ASN A 45 MG MG A1365 1555 1555 2.60 LINK MG MG A1365 O1B ADP A1366 1555 1555 2.46 LINK MG MG A1365 O3B ADP A1366 1555 1555 2.98 LINK OD1 ASN B 45 MG MG B1365 1555 1555 2.41 LINK MG MG B1365 O1A ADP B1366 1555 1555 2.89 LINK MG MG B1365 O3B ADP B1366 1555 1555 2.64 SITE 1 AC1 3 GLU A 41 ASN A 45 ADP A1366 SITE 1 AC2 3 GLU B 41 ASN B 45 ADP B1366 SITE 1 AC3 11 ASN A 45 ALA A 49 ASP A 70 LEU A 83 SITE 2 AC3 11 GLU A 109 ALA A 110 LEU A 111 MG A1365 SITE 3 AC3 11 HOH A2023 HOH A2024 HOH A2025 SITE 1 AC4 11 ASN B 45 ALA B 49 ASP B 70 VAL B 75 SITE 2 AC4 11 LEU B 83 GLU B 109 ALA B 110 LEU B 111 SITE 3 AC4 11 THR B 155 MG B1365 HOH B2025 CRYST1 75.043 74.983 135.294 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013326 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013336 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007391 0.00000