data_1EBK # _entry.id 1EBK # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.385 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1EBK pdb_00001ebk 10.2210/pdb1ebk/pdb RCSB RCSB010435 ? ? WWPDB D_1000010435 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2000-07-26 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2012-12-12 5 'Structure model' 1 4 2017-10-04 6 'Structure model' 1 5 2021-11-03 7 'Structure model' 1 6 2024-02-07 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Atomic model' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Non-polymer description' 6 3 'Structure model' 'Structure summary' 7 3 'Structure model' 'Version format compliance' 8 4 'Structure model' Other 9 5 'Structure model' 'Refinement description' 10 6 'Structure model' 'Database references' 11 6 'Structure model' 'Derived calculations' 12 7 'Structure model' 'Data collection' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' software 2 6 'Structure model' database_2 3 6 'Structure model' struct_ref_seq_dif 4 6 'Structure model' struct_sheet 5 6 'Structure model' struct_site 6 7 'Structure model' chem_comp_atom 7 7 'Structure model' chem_comp_bond # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 6 'Structure model' '_database_2.pdbx_DOI' 2 6 'Structure model' '_database_2.pdbx_database_accession' 3 6 'Structure model' '_struct_ref_seq_dif.details' 4 6 'Structure model' '_struct_sheet.number_strands' 5 6 'Structure model' '_struct_site.pdbx_auth_asym_id' 6 6 'Structure model' '_struct_site.pdbx_auth_comp_id' 7 6 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1EBK _pdbx_database_status.recvd_initial_deposition_date 2000-01-24 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1a94 . unspecified PDB 1dw6 . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Mahalingam, B.' 1 'Louis, J.M.' 2 'Reed, C.C.' 3 'Adomat, J.M.' 4 'Krouse, J.' 5 'Wang, Y.F.' 6 'Harrison, R.W.' 7 'Weber, I.T.' 8 # _citation.id primary _citation.title 'Structural and kinetic analysis of drug resistant mutants of HIV-1 protease.' _citation.journal_abbrev Eur.J.Biochem. _citation.journal_volume 263 _citation.page_first 238 _citation.page_last 245 _citation.year 1999 _citation.journal_id_ASTM EJBCAI _citation.country IX _citation.journal_id_ISSN 0014-2956 _citation.journal_id_CSD 0262 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 10429209 _citation.pdbx_database_id_DOI 10.1046/j.1432-1327.1999.00514.x # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Mahalingam, B.' 1 ? primary 'Louis, J.M.' 2 ? primary 'Reed, C.C.' 3 ? primary 'Adomat, J.M.' 4 ? primary 'Krouse, J.' 5 ? primary 'Wang, Y.F.' 6 ? primary 'Harrison, R.W.' 7 ? primary 'Weber, I.T.' 8 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'HIV-1 PROTEASE' 10711.611 4 3.4.23.16 'Q7K, R8Q, L33I, L63I, C67A, C95A' 'FRAGMENT 69-167' ? 2 non-polymer syn ;N-[(2R)-2-({N~5~-[amino(iminio)methyl]-L-ornithyl-L-valyl}amino)-4-methylpentyl]-L-phenylalanyl-L-alpha-glutamyl-L-alanyl-L-norleucinamide ; 833.053 2 ? ? ? ? 3 water nat water 18.015 144 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;PQITLWKQPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGIGGFIKVRQYDQIIIEIAGHKAIGTVLVGPT PVNIIGRNLLTQIGATLNF ; _entity_poly.pdbx_seq_one_letter_code_can ;PQITLWKQPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGIGGFIKVRQYDQIIIEIAGHKAIGTVLVGPT PVNIIGRNLLTQIGATLNF ; _entity_poly.pdbx_strand_id C,D,E,F _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 ;N-[(2R)-2-({N~5~-[amino(iminio)methyl]-L-ornithyl-L-valyl}amino)-4-methylpentyl]-L-phenylalanyl-L-alpha-glutamyl-L-alanyl-L-norleucinamide ; 0Q4 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 PRO n 1 2 GLN n 1 3 ILE n 1 4 THR n 1 5 LEU n 1 6 TRP n 1 7 LYS n 1 8 GLN n 1 9 PRO n 1 10 LEU n 1 11 VAL n 1 12 THR n 1 13 ILE n 1 14 LYS n 1 15 ILE n 1 16 GLY n 1 17 GLY n 1 18 GLN n 1 19 LEU n 1 20 LYS n 1 21 GLU n 1 22 ALA n 1 23 LEU n 1 24 LEU n 1 25 ASP n 1 26 THR n 1 27 GLY n 1 28 ALA n 1 29 ASP n 1 30 ASP n 1 31 THR n 1 32 VAL n 1 33 ILE n 1 34 GLU n 1 35 GLU n 1 36 MET n 1 37 SER n 1 38 LEU n 1 39 PRO n 1 40 GLY n 1 41 ARG n 1 42 TRP n 1 43 LYS n 1 44 PRO n 1 45 LYS n 1 46 MET n 1 47 ILE n 1 48 GLY n 1 49 GLY n 1 50 ILE n 1 51 GLY n 1 52 GLY n 1 53 PHE n 1 54 ILE n 1 55 LYS n 1 56 VAL n 1 57 ARG n 1 58 GLN n 1 59 TYR n 1 60 ASP n 1 61 GLN n 1 62 ILE n 1 63 ILE n 1 64 ILE n 1 65 GLU n 1 66 ILE n 1 67 ALA n 1 68 GLY n 1 69 HIS n 1 70 LYS n 1 71 ALA n 1 72 ILE n 1 73 GLY n 1 74 THR n 1 75 VAL n 1 76 LEU n 1 77 VAL n 1 78 GLY n 1 79 PRO n 1 80 THR n 1 81 PRO n 1 82 VAL n 1 83 ASN n 1 84 ILE n 1 85 ILE n 1 86 GLY n 1 87 ARG n 1 88 ASN n 1 89 LEU n 1 90 LEU n 1 91 THR n 1 92 GLN n 1 93 ILE n 1 94 GLY n 1 95 ALA n 1 96 THR n 1 97 LEU n 1 98 ASN n 1 99 PHE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ;ENGINEERED MUTATIONS Q7K, R8Q, L33I, L63I, C67A, C95A STABILIZE THE PROTEASE FROM AUTOPROTEOLYSIS, WHILE RETAINING ACTIVITY SIMILAR TO WILD-TYPE HIV-1 PROTEASE ; _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Human immunodeficiency virus 1' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 11676 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 0Q4 peptide-like . ;N-[(2R)-2-({N~5~-[amino(iminio)methyl]-L-ornithyl-L-valyl}amino)-4-methylpentyl]-L-phenylalanyl-L-alpha-glutamyl-L-alanyl-L-norleucinamide ; 'Inhibitor analogues of CA-p2' 'C40 H70 N11 O8 1' 833.053 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 PRO 1 1 1 PRO PRO C . n A 1 2 GLN 2 2 2 GLN GLN C . n A 1 3 ILE 3 3 3 ILE ILE C . n A 1 4 THR 4 4 4 THR THR C . n A 1 5 LEU 5 5 5 LEU LEU C . n A 1 6 TRP 6 6 6 TRP TRP C . n A 1 7 LYS 7 7 7 LYS LYS C . n A 1 8 GLN 8 8 8 GLN GLN C . n A 1 9 PRO 9 9 9 PRO PRO C . n A 1 10 LEU 10 10 10 LEU LEU C . n A 1 11 VAL 11 11 11 VAL VAL C . n A 1 12 THR 12 12 12 THR THR C . n A 1 13 ILE 13 13 13 ILE ILE C . n A 1 14 LYS 14 14 14 LYS LYS C . n A 1 15 ILE 15 15 15 ILE ILE C . n A 1 16 GLY 16 16 16 GLY GLY C . n A 1 17 GLY 17 17 17 GLY GLY C . n A 1 18 GLN 18 18 18 GLN GLN C . n A 1 19 LEU 19 19 19 LEU LEU C . n A 1 20 LYS 20 20 20 LYS LYS C . n A 1 21 GLU 21 21 21 GLU GLU C . n A 1 22 ALA 22 22 22 ALA ALA C . n A 1 23 LEU 23 23 23 LEU LEU C . n A 1 24 LEU 24 24 24 LEU LEU C . n A 1 25 ASP 25 25 25 ASP ASP C . n A 1 26 THR 26 26 26 THR THR C . n A 1 27 GLY 27 27 27 GLY GLY C . n A 1 28 ALA 28 28 28 ALA ALA C . n A 1 29 ASP 29 29 29 ASP ASP C . n A 1 30 ASP 30 30 30 ASP ASP C . n A 1 31 THR 31 31 31 THR THR C . n A 1 32 VAL 32 32 32 VAL VAL C . n A 1 33 ILE 33 33 33 ILE ILE C . n A 1 34 GLU 34 34 34 GLU GLU C . n A 1 35 GLU 35 35 35 GLU GLU C . n A 1 36 MET 36 36 36 MET MET C . n A 1 37 SER 37 37 37 SER SER C . n A 1 38 LEU 38 38 38 LEU LEU C . n A 1 39 PRO 39 39 39 PRO PRO C . n A 1 40 GLY 40 40 40 GLY GLY C . n A 1 41 ARG 41 41 41 ARG ARG C . n A 1 42 TRP 42 42 42 TRP TRP C . n A 1 43 LYS 43 43 43 LYS LYS C . n A 1 44 PRO 44 44 44 PRO PRO C . n A 1 45 LYS 45 45 45 LYS LYS C . n A 1 46 MET 46 46 46 MET MET C . n A 1 47 ILE 47 47 47 ILE ILE C . n A 1 48 GLY 48 48 48 GLY GLY C . n A 1 49 GLY 49 49 49 GLY GLY C . n A 1 50 ILE 50 50 50 ILE ILE C . n A 1 51 GLY 51 51 51 GLY GLY C . n A 1 52 GLY 52 52 52 GLY GLY C . n A 1 53 PHE 53 53 53 PHE PHE C . n A 1 54 ILE 54 54 54 ILE ILE C . n A 1 55 LYS 55 55 55 LYS LYS C . n A 1 56 VAL 56 56 56 VAL VAL C . n A 1 57 ARG 57 57 57 ARG ARG C . n A 1 58 GLN 58 58 58 GLN GLN C . n A 1 59 TYR 59 59 59 TYR TYR C . n A 1 60 ASP 60 60 60 ASP ASP C . n A 1 61 GLN 61 61 61 GLN GLN C . n A 1 62 ILE 62 62 62 ILE ILE C . n A 1 63 ILE 63 63 63 ILE ILE C . n A 1 64 ILE 64 64 64 ILE ILE C . n A 1 65 GLU 65 65 65 GLU GLU C . n A 1 66 ILE 66 66 66 ILE ILE C . n A 1 67 ALA 67 67 67 ALA ALA C . n A 1 68 GLY 68 68 68 GLY GLY C . n A 1 69 HIS 69 69 69 HIS HIS C . n A 1 70 LYS 70 70 70 LYS LYS C . n A 1 71 ALA 71 71 71 ALA ALA C . n A 1 72 ILE 72 72 72 ILE ILE C . n A 1 73 GLY 73 73 73 GLY GLY C . n A 1 74 THR 74 74 74 THR THR C . n A 1 75 VAL 75 75 75 VAL VAL C . n A 1 76 LEU 76 76 76 LEU LEU C . n A 1 77 VAL 77 77 77 VAL VAL C . n A 1 78 GLY 78 78 78 GLY GLY C . n A 1 79 PRO 79 79 79 PRO PRO C . n A 1 80 THR 80 80 80 THR THR C . n A 1 81 PRO 81 81 81 PRO PRO C . n A 1 82 VAL 82 82 82 VAL VAL C . n A 1 83 ASN 83 83 83 ASN ASN C . n A 1 84 ILE 84 84 84 ILE ILE C . n A 1 85 ILE 85 85 85 ILE ILE C . n A 1 86 GLY 86 86 86 GLY GLY C . n A 1 87 ARG 87 87 87 ARG ARG C . n A 1 88 ASN 88 88 88 ASN ASN C . n A 1 89 LEU 89 89 89 LEU LEU C . n A 1 90 LEU 90 90 90 LEU LEU C . n A 1 91 THR 91 91 91 THR THR C . n A 1 92 GLN 92 92 92 GLN GLN C . n A 1 93 ILE 93 93 93 ILE ILE C . n A 1 94 GLY 94 94 94 GLY GLY C . n A 1 95 ALA 95 95 95 ALA ALA C . n A 1 96 THR 96 96 96 THR THR C . n A 1 97 LEU 97 97 97 LEU LEU C . n A 1 98 ASN 98 98 98 ASN ASN C . n A 1 99 PHE 99 99 99 PHE PHE C . n B 1 1 PRO 1 101 101 PRO PRO D . n B 1 2 GLN 2 102 102 GLN GLN D . n B 1 3 ILE 3 103 103 ILE ILE D . n B 1 4 THR 4 104 104 THR THR D . n B 1 5 LEU 5 105 105 LEU LEU D . n B 1 6 TRP 6 106 106 TRP TRP D . n B 1 7 LYS 7 107 107 LYS LYS D . n B 1 8 GLN 8 108 108 GLN GLN D . n B 1 9 PRO 9 109 109 PRO PRO D . n B 1 10 LEU 10 110 110 LEU LEU D . n B 1 11 VAL 11 111 111 VAL VAL D . n B 1 12 THR 12 112 112 THR THR D . n B 1 13 ILE 13 113 113 ILE ILE D . n B 1 14 LYS 14 114 114 LYS LYS D . n B 1 15 ILE 15 115 115 ILE ILE D . n B 1 16 GLY 16 116 116 GLY GLY D . n B 1 17 GLY 17 117 117 GLY GLY D . n B 1 18 GLN 18 118 118 GLN GLN D . n B 1 19 LEU 19 119 119 LEU LEU D . n B 1 20 LYS 20 120 120 LYS LYS D . n B 1 21 GLU 21 121 121 GLU GLU D . n B 1 22 ALA 22 122 122 ALA ALA D . n B 1 23 LEU 23 123 123 LEU LEU D . n B 1 24 LEU 24 124 124 LEU LEU D . n B 1 25 ASP 25 125 125 ASP ASP D . n B 1 26 THR 26 126 126 THR THR D . n B 1 27 GLY 27 127 127 GLY GLY D . n B 1 28 ALA 28 128 128 ALA ALA D . n B 1 29 ASP 29 129 129 ASP ASP D . n B 1 30 ASP 30 130 130 ASP ASP D . n B 1 31 THR 31 131 131 THR THR D . n B 1 32 VAL 32 132 132 VAL VAL D . n B 1 33 ILE 33 133 133 ILE ILE D . n B 1 34 GLU 34 134 134 GLU GLU D . n B 1 35 GLU 35 135 135 GLU GLU D . n B 1 36 MET 36 136 136 MET MET D . n B 1 37 SER 37 137 137 SER SER D . n B 1 38 LEU 38 138 138 LEU LEU D . n B 1 39 PRO 39 139 139 PRO PRO D . n B 1 40 GLY 40 140 140 GLY GLY D . n B 1 41 ARG 41 141 141 ARG ARG D . n B 1 42 TRP 42 142 142 TRP TRP D . n B 1 43 LYS 43 143 143 LYS LYS D . n B 1 44 PRO 44 144 144 PRO PRO D . n B 1 45 LYS 45 145 145 LYS LYS D . n B 1 46 MET 46 146 146 MET MET D . n B 1 47 ILE 47 147 147 ILE ILE D . n B 1 48 GLY 48 148 148 GLY GLY D . n B 1 49 GLY 49 149 149 GLY GLY D . n B 1 50 ILE 50 150 150 ILE ILE D . n B 1 51 GLY 51 151 151 GLY GLY D . n B 1 52 GLY 52 152 152 GLY GLY D . n B 1 53 PHE 53 153 153 PHE PHE D . n B 1 54 ILE 54 154 154 ILE ILE D . n B 1 55 LYS 55 155 155 LYS LYS D . n B 1 56 VAL 56 156 156 VAL VAL D . n B 1 57 ARG 57 157 157 ARG ARG D . n B 1 58 GLN 58 158 158 GLN GLN D . n B 1 59 TYR 59 159 159 TYR TYR D . n B 1 60 ASP 60 160 160 ASP ASP D . n B 1 61 GLN 61 161 161 GLN GLN D . n B 1 62 ILE 62 162 162 ILE ILE D . n B 1 63 ILE 63 163 163 ILE ILE D . n B 1 64 ILE 64 164 164 ILE ILE D . n B 1 65 GLU 65 165 165 GLU GLU D . n B 1 66 ILE 66 166 166 ILE ILE D . n B 1 67 ALA 67 167 167 ALA ALA D . n B 1 68 GLY 68 168 168 GLY GLY D . n B 1 69 HIS 69 169 169 HIS HIS D . n B 1 70 LYS 70 170 170 LYS LYS D . n B 1 71 ALA 71 171 171 ALA ALA D . n B 1 72 ILE 72 172 172 ILE ILE D . n B 1 73 GLY 73 173 173 GLY GLY D . n B 1 74 THR 74 174 174 THR THR D . n B 1 75 VAL 75 175 175 VAL VAL D . n B 1 76 LEU 76 176 176 LEU LEU D . n B 1 77 VAL 77 177 177 VAL VAL D . n B 1 78 GLY 78 178 178 GLY GLY D . n B 1 79 PRO 79 179 179 PRO PRO D . n B 1 80 THR 80 180 180 THR THR D . n B 1 81 PRO 81 181 181 PRO PRO D . n B 1 82 VAL 82 182 182 VAL VAL D . n B 1 83 ASN 83 183 183 ASN ASN D . n B 1 84 ILE 84 184 184 ILE ILE D . n B 1 85 ILE 85 185 185 ILE ILE D . n B 1 86 GLY 86 186 186 GLY GLY D . n B 1 87 ARG 87 187 187 ARG ARG D . n B 1 88 ASN 88 188 188 ASN ASN D . n B 1 89 LEU 89 189 189 LEU LEU D . n B 1 90 LEU 90 190 190 LEU LEU D . n B 1 91 THR 91 191 191 THR THR D . n B 1 92 GLN 92 192 192 GLN GLN D . n B 1 93 ILE 93 193 193 ILE ILE D . n B 1 94 GLY 94 194 194 GLY GLY D . n B 1 95 ALA 95 195 195 ALA ALA D . n B 1 96 THR 96 196 196 THR THR D . n B 1 97 LEU 97 197 197 LEU LEU D . n B 1 98 ASN 98 198 198 ASN ASN D . n B 1 99 PHE 99 199 199 PHE PHE D . n C 1 1 PRO 1 1 1 PRO PRO E . n C 1 2 GLN 2 2 2 GLN GLN E . n C 1 3 ILE 3 3 3 ILE ILE E . n C 1 4 THR 4 4 4 THR THR E . n C 1 5 LEU 5 5 5 LEU LEU E . n C 1 6 TRP 6 6 6 TRP TRP E . n C 1 7 LYS 7 7 7 LYS LYS E . n C 1 8 GLN 8 8 8 GLN GLN E . n C 1 9 PRO 9 9 9 PRO PRO E . n C 1 10 LEU 10 10 10 LEU LEU E . n C 1 11 VAL 11 11 11 VAL VAL E . n C 1 12 THR 12 12 12 THR THR E . n C 1 13 ILE 13 13 13 ILE ILE E . n C 1 14 LYS 14 14 14 LYS LYS E . n C 1 15 ILE 15 15 15 ILE ILE E . n C 1 16 GLY 16 16 16 GLY GLY E . n C 1 17 GLY 17 17 17 GLY GLY E . n C 1 18 GLN 18 18 18 GLN GLN E . n C 1 19 LEU 19 19 19 LEU LEU E . n C 1 20 LYS 20 20 20 LYS LYS E . n C 1 21 GLU 21 21 21 GLU GLU E . n C 1 22 ALA 22 22 22 ALA ALA E . n C 1 23 LEU 23 23 23 LEU LEU E . n C 1 24 LEU 24 24 24 LEU LEU E . n C 1 25 ASP 25 25 25 ASP ASP E . n C 1 26 THR 26 26 26 THR THR E . n C 1 27 GLY 27 27 27 GLY GLY E . n C 1 28 ALA 28 28 28 ALA ALA E . n C 1 29 ASP 29 29 29 ASP ASP E . n C 1 30 ASP 30 30 30 ASP ASP E . n C 1 31 THR 31 31 31 THR THR E . n C 1 32 VAL 32 32 32 VAL VAL E . n C 1 33 ILE 33 33 33 ILE ILE E . n C 1 34 GLU 34 34 34 GLU GLU E . n C 1 35 GLU 35 35 35 GLU GLU E . n C 1 36 MET 36 36 36 MET MET E . n C 1 37 SER 37 37 37 SER SER E . n C 1 38 LEU 38 38 38 LEU LEU E . n C 1 39 PRO 39 39 39 PRO PRO E . n C 1 40 GLY 40 40 40 GLY GLY E . n C 1 41 ARG 41 41 41 ARG ARG E . n C 1 42 TRP 42 42 42 TRP TRP E . n C 1 43 LYS 43 43 43 LYS LYS E . n C 1 44 PRO 44 44 44 PRO PRO E . n C 1 45 LYS 45 45 45 LYS LYS E . n C 1 46 MET 46 46 46 MET MET E . n C 1 47 ILE 47 47 47 ILE ILE E . n C 1 48 GLY 48 48 48 GLY GLY E . n C 1 49 GLY 49 49 49 GLY GLY E . n C 1 50 ILE 50 50 50 ILE ILE E . n C 1 51 GLY 51 51 51 GLY GLY E . n C 1 52 GLY 52 52 52 GLY GLY E . n C 1 53 PHE 53 53 53 PHE PHE E . n C 1 54 ILE 54 54 54 ILE ILE E . n C 1 55 LYS 55 55 55 LYS LYS E . n C 1 56 VAL 56 56 56 VAL VAL E . n C 1 57 ARG 57 57 57 ARG ARG E . n C 1 58 GLN 58 58 58 GLN GLN E . n C 1 59 TYR 59 59 59 TYR TYR E . n C 1 60 ASP 60 60 60 ASP ASP E . n C 1 61 GLN 61 61 61 GLN GLN E . n C 1 62 ILE 62 62 62 ILE ILE E . n C 1 63 ILE 63 63 63 ILE ILE E . n C 1 64 ILE 64 64 64 ILE ILE E . n C 1 65 GLU 65 65 65 GLU GLU E . n C 1 66 ILE 66 66 66 ILE ILE E . n C 1 67 ALA 67 67 67 ALA ALA E . n C 1 68 GLY 68 68 68 GLY GLY E . n C 1 69 HIS 69 69 69 HIS HIS E . n C 1 70 LYS 70 70 70 LYS LYS E . n C 1 71 ALA 71 71 71 ALA ALA E . n C 1 72 ILE 72 72 72 ILE ILE E . n C 1 73 GLY 73 73 73 GLY GLY E . n C 1 74 THR 74 74 74 THR THR E . n C 1 75 VAL 75 75 75 VAL VAL E . n C 1 76 LEU 76 76 76 LEU LEU E . n C 1 77 VAL 77 77 77 VAL VAL E . n C 1 78 GLY 78 78 78 GLY GLY E . n C 1 79 PRO 79 79 79 PRO PRO E . n C 1 80 THR 80 80 80 THR THR E . n C 1 81 PRO 81 81 81 PRO PRO E . n C 1 82 VAL 82 82 82 VAL VAL E . n C 1 83 ASN 83 83 83 ASN ASN E . n C 1 84 ILE 84 84 84 ILE ILE E . n C 1 85 ILE 85 85 85 ILE ILE E . n C 1 86 GLY 86 86 86 GLY GLY E . n C 1 87 ARG 87 87 87 ARG ARG E . n C 1 88 ASN 88 88 88 ASN ASN E . n C 1 89 LEU 89 89 89 LEU LEU E . n C 1 90 LEU 90 90 90 LEU LEU E . n C 1 91 THR 91 91 91 THR THR E . n C 1 92 GLN 92 92 92 GLN GLN E . n C 1 93 ILE 93 93 93 ILE ILE E . n C 1 94 GLY 94 94 94 GLY GLY E . n C 1 95 ALA 95 95 95 ALA ALA E . n C 1 96 THR 96 96 96 THR THR E . n C 1 97 LEU 97 97 97 LEU LEU E . n C 1 98 ASN 98 98 98 ASN ASN E . n C 1 99 PHE 99 99 99 PHE PHE E . n D 1 1 PRO 1 101 101 PRO PRO F . n D 1 2 GLN 2 102 102 GLN GLN F . n D 1 3 ILE 3 103 103 ILE ILE F . n D 1 4 THR 4 104 104 THR THR F . n D 1 5 LEU 5 105 105 LEU LEU F . n D 1 6 TRP 6 106 106 TRP TRP F . n D 1 7 LYS 7 107 107 LYS LYS F . n D 1 8 GLN 8 108 108 GLN GLN F . n D 1 9 PRO 9 109 109 PRO PRO F . n D 1 10 LEU 10 110 110 LEU LEU F . n D 1 11 VAL 11 111 111 VAL VAL F . n D 1 12 THR 12 112 112 THR THR F . n D 1 13 ILE 13 113 113 ILE ILE F . n D 1 14 LYS 14 114 114 LYS LYS F . n D 1 15 ILE 15 115 115 ILE ILE F . n D 1 16 GLY 16 116 116 GLY GLY F . n D 1 17 GLY 17 117 117 GLY GLY F . n D 1 18 GLN 18 118 118 GLN GLN F . n D 1 19 LEU 19 119 119 LEU LEU F . n D 1 20 LYS 20 120 120 LYS LYS F . n D 1 21 GLU 21 121 121 GLU GLU F . n D 1 22 ALA 22 122 122 ALA ALA F . n D 1 23 LEU 23 123 123 LEU LEU F . n D 1 24 LEU 24 124 124 LEU LEU F . n D 1 25 ASP 25 125 125 ASP ASP F . n D 1 26 THR 26 126 126 THR THR F . n D 1 27 GLY 27 127 127 GLY GLY F . n D 1 28 ALA 28 128 128 ALA ALA F . n D 1 29 ASP 29 129 129 ASP ASP F . n D 1 30 ASP 30 130 130 ASP ASP F . n D 1 31 THR 31 131 131 THR THR F . n D 1 32 VAL 32 132 132 VAL VAL F . n D 1 33 ILE 33 133 133 ILE ILE F . n D 1 34 GLU 34 134 134 GLU GLU F . n D 1 35 GLU 35 135 135 GLU GLU F . n D 1 36 MET 36 136 136 MET MET F . n D 1 37 SER 37 137 137 SER SER F . n D 1 38 LEU 38 138 138 LEU LEU F . n D 1 39 PRO 39 139 139 PRO PRO F . n D 1 40 GLY 40 140 140 GLY GLY F . n D 1 41 ARG 41 141 141 ARG ARG F . n D 1 42 TRP 42 142 142 TRP TRP F . n D 1 43 LYS 43 143 143 LYS LYS F . n D 1 44 PRO 44 144 144 PRO PRO F . n D 1 45 LYS 45 145 145 LYS LYS F . n D 1 46 MET 46 146 146 MET MET F . n D 1 47 ILE 47 147 147 ILE ILE F . n D 1 48 GLY 48 148 148 GLY GLY F . n D 1 49 GLY 49 149 149 GLY GLY F . n D 1 50 ILE 50 150 150 ILE ILE F . n D 1 51 GLY 51 151 151 GLY GLY F . n D 1 52 GLY 52 152 152 GLY GLY F . n D 1 53 PHE 53 153 153 PHE PHE F . n D 1 54 ILE 54 154 154 ILE ILE F . n D 1 55 LYS 55 155 155 LYS LYS F . n D 1 56 VAL 56 156 156 VAL VAL F . n D 1 57 ARG 57 157 157 ARG ARG F . n D 1 58 GLN 58 158 158 GLN GLN F . n D 1 59 TYR 59 159 159 TYR TYR F . n D 1 60 ASP 60 160 160 ASP ASP F . n D 1 61 GLN 61 161 161 GLN GLN F . n D 1 62 ILE 62 162 162 ILE ILE F . n D 1 63 ILE 63 163 163 ILE ILE F . n D 1 64 ILE 64 164 164 ILE ILE F . n D 1 65 GLU 65 165 165 GLU GLU F . n D 1 66 ILE 66 166 166 ILE ILE F . n D 1 67 ALA 67 167 167 ALA ALA F . n D 1 68 GLY 68 168 168 GLY GLY F . n D 1 69 HIS 69 169 169 HIS HIS F . n D 1 70 LYS 70 170 170 LYS LYS F . n D 1 71 ALA 71 171 171 ALA ALA F . n D 1 72 ILE 72 172 172 ILE ILE F . n D 1 73 GLY 73 173 173 GLY GLY F . n D 1 74 THR 74 174 174 THR THR F . n D 1 75 VAL 75 175 175 VAL VAL F . n D 1 76 LEU 76 176 176 LEU LEU F . n D 1 77 VAL 77 177 177 VAL VAL F . n D 1 78 GLY 78 178 178 GLY GLY F . n D 1 79 PRO 79 179 179 PRO PRO F . n D 1 80 THR 80 180 180 THR THR F . n D 1 81 PRO 81 181 181 PRO PRO F . n D 1 82 VAL 82 182 182 VAL VAL F . n D 1 83 ASN 83 183 183 ASN ASN F . n D 1 84 ILE 84 184 184 ILE ILE F . n D 1 85 ILE 85 185 185 ILE ILE F . n D 1 86 GLY 86 186 186 GLY GLY F . n D 1 87 ARG 87 187 187 ARG ARG F . n D 1 88 ASN 88 188 188 ASN ASN F . n D 1 89 LEU 89 189 189 LEU LEU F . n D 1 90 LEU 90 190 190 LEU LEU F . n D 1 91 THR 91 191 191 THR THR F . n D 1 92 GLN 92 192 192 GLN GLN F . n D 1 93 ILE 93 193 193 ILE ILE F . n D 1 94 GLY 94 194 194 GLY GLY F . n D 1 95 ALA 95 195 195 ALA ALA F . n D 1 96 THR 96 196 196 THR THR F . n D 1 97 LEU 97 197 197 LEU LEU F . n D 1 98 ASN 98 198 198 ASN ASN F . n D 1 99 PHE 99 199 199 PHE PHE F . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 0Q4 1 201 201 0Q4 ARG D . F 2 0Q4 1 501 501 0Q4 ARG E . G 3 HOH 1 1305 1305 HOH HOH C . G 3 HOH 2 1307 1307 HOH HOH C . G 3 HOH 3 1309 1309 HOH HOH C . G 3 HOH 4 1322 1322 HOH HOH C . G 3 HOH 5 1328 1328 HOH HOH C . G 3 HOH 6 1332 1332 HOH HOH C . G 3 HOH 7 1336 1336 HOH HOH C . G 3 HOH 8 1337 1337 HOH HOH C . G 3 HOH 9 1338 1338 HOH HOH C . G 3 HOH 10 1339 1339 HOH HOH C . G 3 HOH 11 1344 1344 HOH HOH C . G 3 HOH 12 1348 1348 HOH HOH C . G 3 HOH 13 1359 1359 HOH HOH C . G 3 HOH 14 1360 1360 HOH HOH C . G 3 HOH 15 1361 1361 HOH HOH C . G 3 HOH 16 1362 1362 HOH HOH C . G 3 HOH 17 1364 1364 HOH HOH C . G 3 HOH 18 1365 1365 HOH HOH C . G 3 HOH 19 1366 1366 HOH HOH C . G 3 HOH 20 1368 1368 HOH HOH C . G 3 HOH 21 1369 1369 HOH HOH C . G 3 HOH 22 1373 1373 HOH HOH C . G 3 HOH 23 1377 1377 HOH HOH C . G 3 HOH 24 1382 1382 HOH HOH C . G 3 HOH 25 1390 1390 HOH HOH C . G 3 HOH 26 1398 1398 HOH HOH C . G 3 HOH 27 1400 1400 HOH HOH C . G 3 HOH 28 1401 1401 HOH HOH C . G 3 HOH 29 1407 1407 HOH HOH C . G 3 HOH 30 1410 1410 HOH HOH C . G 3 HOH 31 1419 1419 HOH HOH C . G 3 HOH 32 1428 1428 HOH HOH C . G 3 HOH 33 1433 1433 HOH HOH C . G 3 HOH 34 1434 1434 HOH HOH C . G 3 HOH 35 1436 1436 HOH HOH C . G 3 HOH 36 1441 1441 HOH HOH C . G 3 HOH 37 1444 1444 HOH HOH C . H 3 HOH 1 1301 1301 HOH HOH D . H 3 HOH 2 1303 1303 HOH HOH D . H 3 HOH 3 1312 1312 HOH HOH D . H 3 HOH 4 1313 1313 HOH HOH D . H 3 HOH 5 1321 1321 HOH HOH D . H 3 HOH 6 1325 1325 HOH HOH D . H 3 HOH 7 1327 1327 HOH HOH D . H 3 HOH 8 1334 1334 HOH HOH D . H 3 HOH 9 1335 1335 HOH HOH D . H 3 HOH 10 1340 1340 HOH HOH D . H 3 HOH 11 1345 1345 HOH HOH D . H 3 HOH 12 1346 1346 HOH HOH D . H 3 HOH 13 1347 1347 HOH HOH D . H 3 HOH 14 1354 1354 HOH HOH D . H 3 HOH 15 1357 1357 HOH HOH D . H 3 HOH 16 1358 1358 HOH HOH D . H 3 HOH 17 1378 1378 HOH HOH D . H 3 HOH 18 1379 1379 HOH HOH D . H 3 HOH 19 1383 1383 HOH HOH D . H 3 HOH 20 1384 1384 HOH HOH D . H 3 HOH 21 1388 1388 HOH HOH D . H 3 HOH 22 1392 1392 HOH HOH D . H 3 HOH 23 1393 1393 HOH HOH D . H 3 HOH 24 1395 1395 HOH HOH D . H 3 HOH 25 1404 1404 HOH HOH D . H 3 HOH 26 1406 1406 HOH HOH D . H 3 HOH 27 1412 1412 HOH HOH D . H 3 HOH 28 1413 1413 HOH HOH D . H 3 HOH 29 1414 1414 HOH HOH D . H 3 HOH 30 1416 1416 HOH HOH D . H 3 HOH 31 1420 1420 HOH HOH D . H 3 HOH 32 1421 1421 HOH HOH D . H 3 HOH 33 1422 1422 HOH HOH D . H 3 HOH 34 1423 1423 HOH HOH D . H 3 HOH 35 1425 1425 HOH HOH D . H 3 HOH 36 1427 1427 HOH HOH D . H 3 HOH 37 1432 1432 HOH HOH D . H 3 HOH 38 1435 1435 HOH HOH D . H 3 HOH 39 1440 1440 HOH HOH D . H 3 HOH 40 1442 1442 HOH HOH D . H 3 HOH 41 1447 1447 HOH HOH D . I 3 HOH 1 1304 1304 HOH HOH E . I 3 HOH 2 1306 1306 HOH HOH E . I 3 HOH 3 1308 1308 HOH HOH E . I 3 HOH 4 1314 1314 HOH HOH E . I 3 HOH 5 1320 1320 HOH HOH E . I 3 HOH 6 1343 1343 HOH HOH E . I 3 HOH 7 1349 1349 HOH HOH E . I 3 HOH 8 1350 1350 HOH HOH E . I 3 HOH 9 1351 1351 HOH HOH E . I 3 HOH 10 1363 1363 HOH HOH E . I 3 HOH 11 1370 1370 HOH HOH E . I 3 HOH 12 1371 1371 HOH HOH E . I 3 HOH 13 1374 1374 HOH HOH E . I 3 HOH 14 1381 1381 HOH HOH E . I 3 HOH 15 1385 1385 HOH HOH E . I 3 HOH 16 1386 1386 HOH HOH E . I 3 HOH 17 1387 1387 HOH HOH E . I 3 HOH 18 1389 1389 HOH HOH E . I 3 HOH 19 1399 1399 HOH HOH E . I 3 HOH 20 1402 1402 HOH HOH E . I 3 HOH 21 1409 1409 HOH HOH E . I 3 HOH 22 1415 1415 HOH HOH E . I 3 HOH 23 1417 1417 HOH HOH E . I 3 HOH 24 1426 1426 HOH HOH E . I 3 HOH 25 1437 1437 HOH HOH E . I 3 HOH 26 1438 1438 HOH HOH E . I 3 HOH 27 1445 1445 HOH HOH E . I 3 HOH 28 1446 1446 HOH HOH E . J 3 HOH 1 1302 1302 HOH HOH F . J 3 HOH 2 1310 1310 HOH HOH F . J 3 HOH 3 1311 1311 HOH HOH F . J 3 HOH 4 1315 1315 HOH HOH F . J 3 HOH 5 1316 1316 HOH HOH F . J 3 HOH 6 1318 1318 HOH HOH F . J 3 HOH 7 1319 1319 HOH HOH F . J 3 HOH 8 1323 1323 HOH HOH F . J 3 HOH 9 1324 1324 HOH HOH F . J 3 HOH 10 1326 1326 HOH HOH F . J 3 HOH 11 1329 1329 HOH HOH F . J 3 HOH 12 1331 1331 HOH HOH F . J 3 HOH 13 1333 1333 HOH HOH F . J 3 HOH 14 1342 1342 HOH HOH F . J 3 HOH 15 1352 1352 HOH HOH F . J 3 HOH 16 1353 1353 HOH HOH F . J 3 HOH 17 1355 1355 HOH HOH F . J 3 HOH 18 1356 1356 HOH HOH F . J 3 HOH 19 1367 1367 HOH HOH F . J 3 HOH 20 1372 1372 HOH HOH F . J 3 HOH 21 1375 1375 HOH HOH F . J 3 HOH 22 1376 1376 HOH HOH F . J 3 HOH 23 1380 1380 HOH HOH F . J 3 HOH 24 1391 1391 HOH HOH F . J 3 HOH 25 1394 1394 HOH HOH F . J 3 HOH 26 1396 1396 HOH HOH F . J 3 HOH 27 1397 1397 HOH HOH F . J 3 HOH 28 1403 1403 HOH HOH F . J 3 HOH 29 1405 1405 HOH HOH F . J 3 HOH 30 1408 1408 HOH HOH F . J 3 HOH 31 1411 1411 HOH HOH F . J 3 HOH 32 1418 1418 HOH HOH F . J 3 HOH 33 1424 1424 HOH HOH F . J 3 HOH 34 1429 1429 HOH HOH F . J 3 HOH 35 1430 1430 HOH HOH F . J 3 HOH 36 1431 1431 HOH HOH F . J 3 HOH 37 1439 1439 HOH HOH F . J 3 HOH 38 1443 1443 HOH HOH F . # _software.name X-PLOR _software.classification refinement _software.version . _software.citation_id ? _software.pdbx_ordinal 1 # _cell.entry_id 1EBK _cell.length_a 59.410 _cell.length_b 61.950 _cell.length_c 51.840 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1EBK _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 # _exptl.entry_id 1EBK _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.14 _exptl_crystal.density_percent_sol 42.58 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pdbx_details ;CITRATE/PHOSPHATE BUFFER 0.05M, DTT 10MM, DMSO 10%, SATURATED AMMONIUM SULPHATE (25-50%), PROTEIN 2-5 MG/ML, VAPOR DIFFUSION, HANGING DROP, temperature 298K ; _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 298 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IIC' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.54 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RU200' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.54 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1EBK _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low ? _reflns.d_resolution_high ? _reflns.number_obs 19007 _reflns.number_all ? _reflns.percent_possible_obs 79.2 _reflns.pdbx_Rmerge_I_obs 0.0840000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _refine.entry_id 1EBK _refine.ls_number_reflns_obs 19007 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_d_res_low 8 _refine.ls_d_res_high 2.06 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1920000 _refine.ls_R_factor_R_free 0.3060000 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3016 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 118 _refine_hist.number_atoms_solvent 144 _refine_hist.number_atoms_total 3278 _refine_hist.d_res_high 2.06 _refine_hist.d_res_low 8 # _database_PDB_matrix.entry_id 1EBK _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1EBK _struct.title 'Structural and kinetic analysis of drug resistant mutants of HIV-1 protease' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1EBK _struct_keywords.pdbx_keywords 'HYDROLASE/HYDROLASE INHIBITOR' _struct_keywords.text 'HIV-1 PROTEASE, HYDROLASE-HYDROLASE INHIBITOR COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 2 ? F N N 2 ? G N N 3 ? H N N 3 ? I N N 3 ? J N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code POL_HV1B1 _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession P03366 _struct_ref.pdbx_align_begin 69 _struct_ref.pdbx_seq_one_letter_code ;PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPT PVNIIGRNLLTQIGCTLNF ; _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1EBK C 1 ? 99 ? P03366 69 ? 167 ? 1 99 2 1 1EBK D 1 ? 99 ? P03366 69 ? 167 ? 101 199 3 1 1EBK E 1 ? 99 ? P03366 69 ? 167 ? 1 99 4 1 1EBK F 1 ? 99 ? P03366 69 ? 167 ? 101 199 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1EBK LYS C 7 ? UNP P03366 GLN 75 'engineered mutation' 7 1 1 1EBK GLN C 8 ? UNP P03366 ARG 76 'engineered mutation' 8 2 1 1EBK ILE C 33 ? UNP P03366 LEU 101 'engineered mutation' 33 3 1 1EBK ILE C 63 ? UNP P03366 LEU 131 'engineered mutation' 63 4 1 1EBK ALA C 67 ? UNP P03366 CYS 135 'engineered mutation' 67 5 1 1EBK ALA C 95 ? UNP P03366 CYS 163 'engineered mutation' 95 6 2 1EBK LYS D 7 ? UNP P03366 GLN 75 'engineered mutation' 107 7 2 1EBK GLN D 8 ? UNP P03366 ARG 76 'engineered mutation' 108 8 2 1EBK ILE D 33 ? UNP P03366 LEU 101 'engineered mutation' 133 9 2 1EBK ILE D 63 ? UNP P03366 LEU 131 'engineered mutation' 163 10 2 1EBK ALA D 67 ? UNP P03366 CYS 135 'engineered mutation' 167 11 2 1EBK ALA D 95 ? UNP P03366 CYS 163 'engineered mutation' 195 12 3 1EBK LYS E 7 ? UNP P03366 GLN 75 'engineered mutation' 7 13 3 1EBK GLN E 8 ? UNP P03366 ARG 76 'engineered mutation' 8 14 3 1EBK ILE E 33 ? UNP P03366 LEU 101 'engineered mutation' 33 15 3 1EBK ILE E 63 ? UNP P03366 LEU 131 'engineered mutation' 63 16 3 1EBK ALA E 67 ? UNP P03366 CYS 135 'engineered mutation' 67 17 3 1EBK ALA E 95 ? UNP P03366 CYS 163 'engineered mutation' 95 18 4 1EBK LYS F 7 ? UNP P03366 GLN 75 'engineered mutation' 107 19 4 1EBK GLN F 8 ? UNP P03366 ARG 76 'engineered mutation' 108 20 4 1EBK ILE F 33 ? UNP P03366 LEU 101 'engineered mutation' 133 21 4 1EBK ILE F 63 ? UNP P03366 LEU 131 'engineered mutation' 163 22 4 1EBK ALA F 67 ? UNP P03366 CYS 135 'engineered mutation' 167 23 4 1EBK ALA F 95 ? UNP P03366 CYS 163 'engineered mutation' 195 24 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA dimeric 2 2 author_and_software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5060 ? 1 MORE -30 ? 1 'SSA (A^2)' 9160 ? 2 'ABSA (A^2)' 5390 ? 2 MORE -29 ? 2 'SSA (A^2)' 9160 ? # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,E,G,H 2 1 C,D,F,I,J # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_biol.id _struct_biol.details _struct_biol.pdbx_parent_biol_id 1 'The biological assembly is a dimer consisting of chains C and D or chains E and F' ? 2 ? ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 86 ? THR A 91 ? GLY C 86 THR C 91 1 ? 6 HELX_P HELX_P2 2 GLN A 92 ? GLY A 94 ? GLN C 92 GLY C 94 5 ? 3 HELX_P HELX_P3 3 GLY B 86 ? THR B 91 ? GLY D 186 THR D 191 1 ? 6 HELX_P HELX_P4 4 GLY C 86 ? THR C 91 ? GLY E 86 THR E 91 1 ? 6 HELX_P HELX_P5 5 GLY D 86 ? THR D 91 ? GLY F 186 THR F 191 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 8 ? B ? 2 ? C ? 8 ? D ? 4 ? E ? 8 ? F ? 8 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? parallel A 5 6 ? anti-parallel A 6 7 ? parallel A 7 8 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel C 4 5 ? parallel C 5 6 ? anti-parallel C 6 7 ? parallel C 7 8 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel E 3 4 ? anti-parallel E 4 5 ? parallel E 5 6 ? anti-parallel E 6 7 ? parallel E 7 8 ? anti-parallel F 1 2 ? anti-parallel F 2 3 ? anti-parallel F 3 4 ? anti-parallel F 4 5 ? parallel F 5 6 ? anti-parallel F 6 7 ? parallel F 7 8 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LYS A 43 ? GLY A 49 ? LYS C 43 GLY C 49 A 2 GLY A 52 ? ILE A 66 ? GLY C 52 ILE C 66 A 3 LEU A 10 ? ILE A 15 ? LEU C 10 ILE C 15 A 4 GLN A 18 ? LEU A 24 ? GLN C 18 LEU C 24 A 5 ILE A 84 ? ILE A 85 ? ILE C 84 ILE C 85 A 6 VAL A 32 ? GLU A 34 ? VAL C 32 GLU C 34 A 7 HIS A 69 ? GLY A 78 ? HIS C 69 GLY C 78 A 8 GLY A 52 ? ILE A 66 ? GLY C 52 ILE C 66 B 1 LEU A 97 ? ASN A 98 ? LEU C 97 ASN C 98 B 2 GLN B 2 ? ILE B 3 ? GLN D 102 ILE D 103 C 1 LYS B 43 ? GLY B 49 ? LYS D 143 GLY D 149 C 2 PHE B 53 ? ILE B 66 ? PHE D 153 ILE D 166 C 3 LEU B 10 ? ILE B 15 ? LEU D 110 ILE D 115 C 4 GLN B 18 ? LEU B 24 ? GLN D 118 LEU D 124 C 5 ILE B 84 ? ILE B 85 ? ILE D 184 ILE D 185 C 6 VAL B 32 ? ILE B 33 ? VAL D 132 ILE D 133 C 7 LYS B 70 ? VAL B 77 ? LYS D 170 VAL D 177 C 8 PHE B 53 ? ILE B 66 ? PHE D 153 ILE D 166 D 1 GLN C 2 ? ILE C 3 ? GLN E 2 ILE E 3 D 2 THR D 96 ? ASN D 98 ? THR F 196 ASN F 198 D 3 THR C 96 ? ASN C 98 ? THR E 96 ASN E 98 D 4 GLN D 2 ? THR D 4 ? GLN F 102 THR F 104 E 1 TRP C 42 ? GLY C 49 ? TRP E 42 GLY E 49 E 2 GLY C 52 ? ILE C 66 ? GLY E 52 ILE E 66 E 3 LEU C 10 ? ILE C 15 ? LEU E 10 ILE E 15 E 4 GLN C 18 ? LEU C 24 ? GLN E 18 LEU E 24 E 5 ILE C 84 ? ILE C 85 ? ILE E 84 ILE E 85 E 6 VAL C 32 ? GLU C 34 ? VAL E 32 GLU E 34 E 7 HIS C 69 ? GLY C 78 ? HIS E 69 GLY E 78 E 8 GLY C 52 ? ILE C 66 ? GLY E 52 ILE E 66 F 1 TRP D 42 ? GLY D 48 ? TRP F 142 GLY F 148 F 2 PHE D 53 ? ILE D 66 ? PHE F 153 ILE F 166 F 3 LEU D 10 ? ILE D 15 ? LEU F 110 ILE F 115 F 4 GLN D 18 ? LEU D 24 ? GLN F 118 LEU F 124 F 5 ILE D 84 ? ILE D 85 ? ILE F 184 ILE F 185 F 6 VAL D 32 ? ILE D 33 ? VAL F 132 ILE F 133 F 7 HIS D 69 ? VAL D 77 ? HIS F 169 VAL F 177 F 8 PHE D 53 ? ILE D 66 ? PHE F 153 ILE F 166 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLY A 49 ? N GLY C 49 O GLY A 52 ? O GLY C 52 A 2 3 O GLU A 65 ? O GLU C 65 N LYS A 14 ? N LYS C 14 A 3 4 O ILE A 15 ? O ILE C 15 N GLN A 18 ? N GLN C 18 A 4 5 O LEU A 23 ? O LEU C 23 N ILE A 85 ? N ILE C 85 A 5 6 O ILE A 84 ? O ILE C 84 N VAL A 32 ? N VAL C 32 A 6 7 N ILE A 33 ? N ILE C 33 O LEU A 76 ? O LEU C 76 A 7 8 N VAL A 77 ? N VAL C 77 O ARG A 57 ? O ARG C 57 B 1 2 O LEU A 97 ? O LEU C 97 N ILE B 3 ? N ILE D 103 C 1 2 O ILE B 47 ? O ILE D 147 N ILE B 54 ? N ILE D 154 C 2 3 N GLU B 65 ? N GLU D 165 O LYS B 14 ? O LYS D 114 C 3 4 N ILE B 15 ? N ILE D 115 O GLN B 18 ? O GLN D 118 C 4 5 O LEU B 23 ? O LEU D 123 N ILE B 85 ? N ILE D 185 C 5 6 N ILE B 84 ? N ILE D 184 O VAL B 32 ? O VAL D 132 C 6 7 N ILE B 33 ? N ILE D 133 O LEU B 76 ? O LEU D 176 C 7 8 O VAL B 77 ? O VAL D 177 N ARG B 57 ? N ARG D 157 D 1 2 N ILE C 3 ? N ILE E 3 O LEU D 97 ? O LEU F 197 D 2 3 N ASN D 98 ? N ASN F 198 O THR C 96 ? O THR E 96 D 3 4 O LEU C 97 ? O LEU E 97 N ILE D 3 ? N ILE F 103 E 1 2 N GLY C 49 ? N GLY E 49 O GLY C 52 ? O GLY E 52 E 2 3 N GLU C 65 ? N GLU E 65 O LYS C 14 ? O LYS E 14 E 3 4 O ILE C 15 ? O ILE E 15 N GLN C 18 ? N GLN E 18 E 4 5 O LEU C 23 ? O LEU E 23 N ILE C 85 ? N ILE E 85 E 5 6 N ILE C 84 ? N ILE E 84 O VAL C 32 ? O VAL E 32 E 6 7 N ILE C 33 ? N ILE E 33 O LEU C 76 ? O LEU E 76 E 7 8 N VAL C 77 ? N VAL E 77 O ARG C 57 ? O ARG E 57 F 1 2 O ILE D 47 ? O ILE F 147 N ILE D 54 ? N ILE F 154 F 2 3 O GLU D 65 ? O GLU F 165 N LYS D 14 ? N LYS F 114 F 3 4 O ILE D 15 ? O ILE F 115 N GLN D 18 ? N GLN F 118 F 4 5 O LEU D 23 ? O LEU F 123 N ILE D 85 ? N ILE F 185 F 5 6 N ILE D 84 ? N ILE F 184 O VAL D 32 ? O VAL F 132 F 6 7 N ILE D 33 ? N ILE F 133 O LEU D 76 ? O LEU F 176 F 7 8 O VAL D 77 ? O VAL F 177 N ARG D 57 ? N ARG F 157 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software D 0Q4 201 ? 25 'BINDING SITE FOR RESIDUE 0Q4 D 201' AC2 Software E 0Q4 501 ? 25 'BINDING SITE FOR RESIDUE 0Q4 E 501' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 25 ASP A 25 ? ASP C 25 . ? 1_555 ? 2 AC1 25 GLY A 27 ? GLY C 27 . ? 1_555 ? 3 AC1 25 ALA A 28 ? ALA C 28 . ? 1_555 ? 4 AC1 25 ASP A 29 ? ASP C 29 . ? 1_555 ? 5 AC1 25 ASP A 30 ? ASP C 30 . ? 1_555 ? 6 AC1 25 GLY A 48 ? GLY C 48 . ? 1_555 ? 7 AC1 25 GLY A 49 ? GLY C 49 . ? 1_555 ? 8 AC1 25 ILE A 50 ? ILE C 50 . ? 1_555 ? 9 AC1 25 ILE A 84 ? ILE C 84 . ? 1_555 ? 10 AC1 25 LEU B 23 ? LEU D 123 . ? 1_555 ? 11 AC1 25 ASP B 25 ? ASP D 125 . ? 1_555 ? 12 AC1 25 GLY B 27 ? GLY D 127 . ? 1_555 ? 13 AC1 25 ALA B 28 ? ALA D 128 . ? 1_555 ? 14 AC1 25 ASP B 29 ? ASP D 129 . ? 1_555 ? 15 AC1 25 ASP B 30 ? ASP D 130 . ? 1_555 ? 16 AC1 25 MET B 46 ? MET D 146 . ? 1_555 ? 17 AC1 25 ILE B 47 ? ILE D 147 . ? 1_555 ? 18 AC1 25 GLY B 48 ? GLY D 148 . ? 1_555 ? 19 AC1 25 GLY B 49 ? GLY D 149 . ? 1_555 ? 20 AC1 25 PRO B 81 ? PRO D 181 . ? 1_555 ? 21 AC1 25 VAL B 82 ? VAL D 182 . ? 1_555 ? 22 AC1 25 ILE B 84 ? ILE D 184 . ? 1_555 ? 23 AC1 25 HOH H . ? HOH D 1435 . ? 1_555 ? 24 AC1 25 HOH H . ? HOH D 1447 . ? 1_555 ? 25 AC1 25 TRP C 6 ? TRP E 6 . ? 1_555 ? 26 AC2 25 ASP C 25 ? ASP E 25 . ? 1_555 ? 27 AC2 25 GLY C 27 ? GLY E 27 . ? 1_555 ? 28 AC2 25 ALA C 28 ? ALA E 28 . ? 1_555 ? 29 AC2 25 ASP C 29 ? ASP E 29 . ? 1_555 ? 30 AC2 25 ASP C 30 ? ASP E 30 . ? 1_555 ? 31 AC2 25 THR C 31 ? THR E 31 . ? 1_555 ? 32 AC2 25 VAL C 32 ? VAL E 32 . ? 1_555 ? 33 AC2 25 LYS C 45 ? LYS E 45 . ? 1_555 ? 34 AC2 25 ILE C 47 ? ILE E 47 . ? 1_555 ? 35 AC2 25 GLY C 48 ? GLY E 48 . ? 1_555 ? 36 AC2 25 GLY C 49 ? GLY E 49 . ? 1_555 ? 37 AC2 25 ILE C 50 ? ILE E 50 . ? 1_555 ? 38 AC2 25 HOH I . ? HOH E 1320 . ? 1_555 ? 39 AC2 25 HOH I . ? HOH E 1343 . ? 1_555 ? 40 AC2 25 LEU D 23 ? LEU F 123 . ? 1_555 ? 41 AC2 25 ASP D 25 ? ASP F 125 . ? 1_555 ? 42 AC2 25 GLY D 27 ? GLY F 127 . ? 1_555 ? 43 AC2 25 ALA D 28 ? ALA F 128 . ? 1_555 ? 44 AC2 25 ASP D 29 ? ASP F 129 . ? 1_555 ? 45 AC2 25 LYS D 45 ? LYS F 145 . ? 1_555 ? 46 AC2 25 ILE D 47 ? ILE F 147 . ? 1_555 ? 47 AC2 25 GLY D 48 ? GLY F 148 . ? 1_555 ? 48 AC2 25 GLY D 49 ? GLY F 149 . ? 1_555 ? 49 AC2 25 VAL D 82 ? VAL F 182 . ? 1_555 ? 50 AC2 25 ILE D 84 ? ILE F 184 . ? 1_555 ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CA C LEU 23 ? ? CB C LEU 23 ? ? CG C LEU 23 ? ? 131.77 115.30 16.47 2.30 N 2 1 CA D LEU 110 ? ? CB D LEU 110 ? ? CG D LEU 110 ? ? 130.95 115.30 15.65 2.30 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ILE C 3 ? ? -56.26 74.16 2 1 THR C 4 ? ? -61.96 81.17 3 1 TRP C 6 ? ? -170.35 -66.96 4 1 PRO C 9 ? ? -69.16 70.93 5 1 PRO C 79 ? ? -69.80 53.89 6 1 ASN D 198 ? ? 106.05 -144.80 # _pdbx_molecule_features.prd_id PRD_000349 _pdbx_molecule_features.name ;N-[(2R)-2-({N~5~-[amino(iminio)methyl]-L-ornithyl-L-valyl}amino)-4-methylpentyl]-L-phenylalanyl-L-alpha-glutamyl- L-alanyl-L-norleucinamide ; _pdbx_molecule_features.type Peptide-like _pdbx_molecule_features.class Inhibitor _pdbx_molecule_features.details ? # loop_ _pdbx_molecule.instance_id _pdbx_molecule.prd_id _pdbx_molecule.asym_id 1 PRD_000349 E 2 PRD_000349 F # _pdbx_entry_details.entry_id 1EBK _pdbx_entry_details.sequence_details ;ENGINEERED MUTATIONS Q7K, R8Q, L33I, L63I, C67A, C95A STABILIZE THE PROTEASE FROM AUTOPROTEOLYSIS, WHILE RETAINING ACTIVITY SIMILAR TO WILD-TYPE HIV-1 PROTEASE ; _pdbx_entry_details.nonpolymer_details ;PEPTIDE INHIBITOR 0Q4 HAS A REDUCED PEPTIDE (-CH2-NH) INSTEAD OF THE NORMAL PEPTIDE LINK (-CO-NH). ; _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 0Q4 N N N N 1 0Q4 CA C N S 2 0Q4 C C N N 3 0Q4 O O N N 4 0Q4 CB C N N 5 0Q4 CG C N N 6 0Q4 CD C N N 7 0Q4 NE N N N 8 0Q4 CZ C N N 9 0Q4 NH1 N N N 10 0Q4 NH2 N N N 11 0Q4 N1 N N N 12 0Q4 CA1 C N S 13 0Q4 C1 C N N 14 0Q4 O1 O N N 15 0Q4 CB1 C N N 16 0Q4 CG1 C N N 17 0Q4 CG2 C N N 18 0Q4 N2 N N N 19 0Q4 CA2 C N S 20 0Q4 C2 C N N 21 0Q4 CB2 C N N 22 0Q4 CG3 C N N 23 0Q4 CD1 C N N 24 0Q4 CD2 C N N 25 0Q4 N3 N N N 26 0Q4 CA3 C N S 27 0Q4 C3 C N N 28 0Q4 O2 O N N 29 0Q4 CB3 C N N 30 0Q4 CG4 C Y N 31 0Q4 CD11 C Y N 32 0Q4 CD21 C Y N 33 0Q4 CE1 C Y N 34 0Q4 CE2 C Y N 35 0Q4 CZ1 C Y N 36 0Q4 N4 N N N 37 0Q4 CA4 C N S 38 0Q4 C4 C N N 39 0Q4 O3 O N N 40 0Q4 CB4 C N N 41 0Q4 CG5 C N N 42 0Q4 CD3 C N N 43 0Q4 OE1 O N N 44 0Q4 OE2 O N N 45 0Q4 N5 N N N 46 0Q4 CA5 C N S 47 0Q4 C5 C N N 48 0Q4 O4 O N N 49 0Q4 CB5 C N N 50 0Q4 N6 N N N 51 0Q4 CA6 C N S 52 0Q4 C6 C N N 53 0Q4 O5 O N N 54 0Q4 CB6 C N N 55 0Q4 CG6 C N N 56 0Q4 CD4 C N N 57 0Q4 CE C N N 58 0Q4 N7 N N N 59 0Q4 H H N N 60 0Q4 H2 H N N 61 0Q4 HA H N N 62 0Q4 HB2 H N N 63 0Q4 HB3 H N N 64 0Q4 HG2 H N N 65 0Q4 HG3 H N N 66 0Q4 HD2 H N N 67 0Q4 HD3 H N N 68 0Q4 HE H N N 69 0Q4 HH11 H N N 70 0Q4 HH12 H N N 71 0Q4 HH21 H N N 72 0Q4 HH22 H N N 73 0Q4 H1 H N N 74 0Q4 HA1 H N N 75 0Q4 HB H N N 76 0Q4 HG11 H N N 77 0Q4 HG12 H N N 78 0Q4 HG13 H N N 79 0Q4 HG21 H N N 80 0Q4 HG22 H N N 81 0Q4 HG23 H N N 82 0Q4 HN2 H N N 83 0Q4 HA2 H N N 84 0Q4 HC1 H N N 85 0Q4 HC2 H N N 86 0Q4 HB1 H N N 87 0Q4 HB21 H N N 88 0Q4 HG H N N 89 0Q4 HD11 H N N 90 0Q4 HD12 H N N 91 0Q4 HD13 H N N 92 0Q4 HD21 H N N 93 0Q4 HD22 H N N 94 0Q4 HD23 H N N 95 0Q4 H3 H N N 96 0Q4 HA3 H N N 97 0Q4 HB22 H N N 98 0Q4 HB31 H N N 99 0Q4 HD1 H N N 100 0Q4 HD24 H N N 101 0Q4 HE1 H N N 102 0Q4 HE2 H N N 103 0Q4 HZ H N N 104 0Q4 H4 H N N 105 0Q4 HA4 H N N 106 0Q4 HB23 H N N 107 0Q4 HB32 H N N 108 0Q4 HG24 H N N 109 0Q4 HG31 H N N 110 0Q4 HE21 H N N 111 0Q4 H5 H N N 112 0Q4 HA5 H N N 113 0Q4 HB11 H N N 114 0Q4 HB24 H N N 115 0Q4 HB33 H N N 116 0Q4 H6 H N N 117 0Q4 HA6 H N N 118 0Q4 HB25 H N N 119 0Q4 HB34 H N N 120 0Q4 HG25 H N N 121 0Q4 HG32 H N N 122 0Q4 HD25 H N N 123 0Q4 HD31 H N N 124 0Q4 HE11 H N N 125 0Q4 HE22 H N N 126 0Q4 HE3 H N N 127 0Q4 HN1 H N N 128 0Q4 HN21 H N N 129 ALA N N N N 130 ALA CA C N S 131 ALA C C N N 132 ALA O O N N 133 ALA CB C N N 134 ALA OXT O N N 135 ALA H H N N 136 ALA H2 H N N 137 ALA HA H N N 138 ALA HB1 H N N 139 ALA HB2 H N N 140 ALA HB3 H N N 141 ALA HXT H N N 142 ARG N N N N 143 ARG CA C N S 144 ARG C C N N 145 ARG O O N N 146 ARG CB C N N 147 ARG CG C N N 148 ARG CD C N N 149 ARG NE N N N 150 ARG CZ C N N 151 ARG NH1 N N N 152 ARG NH2 N N N 153 ARG OXT O N N 154 ARG H H N N 155 ARG H2 H N N 156 ARG HA H N N 157 ARG HB2 H N N 158 ARG HB3 H N N 159 ARG HG2 H N N 160 ARG HG3 H N N 161 ARG HD2 H N N 162 ARG HD3 H N N 163 ARG HE H N N 164 ARG HH11 H N N 165 ARG HH12 H N N 166 ARG HH21 H N N 167 ARG HH22 H N N 168 ARG HXT H N N 169 ASN N N N N 170 ASN CA C N S 171 ASN C C N N 172 ASN O O N N 173 ASN CB C N N 174 ASN CG C N N 175 ASN OD1 O N N 176 ASN ND2 N N N 177 ASN OXT O N N 178 ASN H H N N 179 ASN H2 H N N 180 ASN HA H N N 181 ASN HB2 H N N 182 ASN HB3 H N N 183 ASN HD21 H N N 184 ASN HD22 H N N 185 ASN HXT H N N 186 ASP N N N N 187 ASP CA C N S 188 ASP C C N N 189 ASP O O N N 190 ASP CB C N N 191 ASP CG C N N 192 ASP OD1 O N N 193 ASP OD2 O N N 194 ASP OXT O N N 195 ASP H H N N 196 ASP H2 H N N 197 ASP HA H N N 198 ASP HB2 H N N 199 ASP HB3 H N N 200 ASP HD2 H N N 201 ASP HXT H N N 202 CYS N N N N 203 CYS CA C N R 204 CYS C C N N 205 CYS O O N N 206 CYS CB C N N 207 CYS SG S N N 208 CYS OXT O N N 209 CYS H H N N 210 CYS H2 H N N 211 CYS HA H N N 212 CYS HB2 H N N 213 CYS HB3 H N N 214 CYS HG H N N 215 CYS HXT H N N 216 GLN N N N N 217 GLN CA C N S 218 GLN C C N N 219 GLN O O N N 220 GLN CB C N N 221 GLN CG C N N 222 GLN CD C N N 223 GLN OE1 O N N 224 GLN NE2 N N N 225 GLN OXT O N N 226 GLN H H N N 227 GLN H2 H N N 228 GLN HA H N N 229 GLN HB2 H N N 230 GLN HB3 H N N 231 GLN HG2 H N N 232 GLN HG3 H N N 233 GLN HE21 H N N 234 GLN HE22 H N N 235 GLN HXT H N N 236 GLU N N N N 237 GLU CA C N S 238 GLU C C N N 239 GLU O O N N 240 GLU CB C N N 241 GLU CG C N N 242 GLU CD C N N 243 GLU OE1 O N N 244 GLU OE2 O N N 245 GLU OXT O N N 246 GLU H H N N 247 GLU H2 H N N 248 GLU HA H N N 249 GLU HB2 H N N 250 GLU HB3 H N N 251 GLU HG2 H N N 252 GLU HG3 H N N 253 GLU HE2 H N N 254 GLU HXT H N N 255 GLY N N N N 256 GLY CA C N N 257 GLY C C N N 258 GLY O O N N 259 GLY OXT O N N 260 GLY H H N N 261 GLY H2 H N N 262 GLY HA2 H N N 263 GLY HA3 H N N 264 GLY HXT H N N 265 HIS N N N N 266 HIS CA C N S 267 HIS C C N N 268 HIS O O N N 269 HIS CB C N N 270 HIS CG C Y N 271 HIS ND1 N Y N 272 HIS CD2 C Y N 273 HIS CE1 C Y N 274 HIS NE2 N Y N 275 HIS OXT O N N 276 HIS H H N N 277 HIS H2 H N N 278 HIS HA H N N 279 HIS HB2 H N N 280 HIS HB3 H N N 281 HIS HD1 H N N 282 HIS HD2 H N N 283 HIS HE1 H N N 284 HIS HE2 H N N 285 HIS HXT H N N 286 HOH O O N N 287 HOH H1 H N N 288 HOH H2 H N N 289 ILE N N N N 290 ILE CA C N S 291 ILE C C N N 292 ILE O O N N 293 ILE CB C N S 294 ILE CG1 C N N 295 ILE CG2 C N N 296 ILE CD1 C N N 297 ILE OXT O N N 298 ILE H H N N 299 ILE H2 H N N 300 ILE HA H N N 301 ILE HB H N N 302 ILE HG12 H N N 303 ILE HG13 H N N 304 ILE HG21 H N N 305 ILE HG22 H N N 306 ILE HG23 H N N 307 ILE HD11 H N N 308 ILE HD12 H N N 309 ILE HD13 H N N 310 ILE HXT H N N 311 LEU N N N N 312 LEU CA C N S 313 LEU C C N N 314 LEU O O N N 315 LEU CB C N N 316 LEU CG C N N 317 LEU CD1 C N N 318 LEU CD2 C N N 319 LEU OXT O N N 320 LEU H H N N 321 LEU H2 H N N 322 LEU HA H N N 323 LEU HB2 H N N 324 LEU HB3 H N N 325 LEU HG H N N 326 LEU HD11 H N N 327 LEU HD12 H N N 328 LEU HD13 H N N 329 LEU HD21 H N N 330 LEU HD22 H N N 331 LEU HD23 H N N 332 LEU HXT H N N 333 LYS N N N N 334 LYS CA C N S 335 LYS C C N N 336 LYS O O N N 337 LYS CB C N N 338 LYS CG C N N 339 LYS CD C N N 340 LYS CE C N N 341 LYS NZ N N N 342 LYS OXT O N N 343 LYS H H N N 344 LYS H2 H N N 345 LYS HA H N N 346 LYS HB2 H N N 347 LYS HB3 H N N 348 LYS HG2 H N N 349 LYS HG3 H N N 350 LYS HD2 H N N 351 LYS HD3 H N N 352 LYS HE2 H N N 353 LYS HE3 H N N 354 LYS HZ1 H N N 355 LYS HZ2 H N N 356 LYS HZ3 H N N 357 LYS HXT H N N 358 MET N N N N 359 MET CA C N S 360 MET C C N N 361 MET O O N N 362 MET CB C N N 363 MET CG C N N 364 MET SD S N N 365 MET CE C N N 366 MET OXT O N N 367 MET H H N N 368 MET H2 H N N 369 MET HA H N N 370 MET HB2 H N N 371 MET HB3 H N N 372 MET HG2 H N N 373 MET HG3 H N N 374 MET HE1 H N N 375 MET HE2 H N N 376 MET HE3 H N N 377 MET HXT H N N 378 PHE N N N N 379 PHE CA C N S 380 PHE C C N N 381 PHE O O N N 382 PHE CB C N N 383 PHE CG C Y N 384 PHE CD1 C Y N 385 PHE CD2 C Y N 386 PHE CE1 C Y N 387 PHE CE2 C Y N 388 PHE CZ C Y N 389 PHE OXT O N N 390 PHE H H N N 391 PHE H2 H N N 392 PHE HA H N N 393 PHE HB2 H N N 394 PHE HB3 H N N 395 PHE HD1 H N N 396 PHE HD2 H N N 397 PHE HE1 H N N 398 PHE HE2 H N N 399 PHE HZ H N N 400 PHE HXT H N N 401 PRO N N N N 402 PRO CA C N S 403 PRO C C N N 404 PRO O O N N 405 PRO CB C N N 406 PRO CG C N N 407 PRO CD C N N 408 PRO OXT O N N 409 PRO H H N N 410 PRO HA H N N 411 PRO HB2 H N N 412 PRO HB3 H N N 413 PRO HG2 H N N 414 PRO HG3 H N N 415 PRO HD2 H N N 416 PRO HD3 H N N 417 PRO HXT H N N 418 SER N N N N 419 SER CA C N S 420 SER C C N N 421 SER O O N N 422 SER CB C N N 423 SER OG O N N 424 SER OXT O N N 425 SER H H N N 426 SER H2 H N N 427 SER HA H N N 428 SER HB2 H N N 429 SER HB3 H N N 430 SER HG H N N 431 SER HXT H N N 432 THR N N N N 433 THR CA C N S 434 THR C C N N 435 THR O O N N 436 THR CB C N R 437 THR OG1 O N N 438 THR CG2 C N N 439 THR OXT O N N 440 THR H H N N 441 THR H2 H N N 442 THR HA H N N 443 THR HB H N N 444 THR HG1 H N N 445 THR HG21 H N N 446 THR HG22 H N N 447 THR HG23 H N N 448 THR HXT H N N 449 TRP N N N N 450 TRP CA C N S 451 TRP C C N N 452 TRP O O N N 453 TRP CB C N N 454 TRP CG C Y N 455 TRP CD1 C Y N 456 TRP CD2 C Y N 457 TRP NE1 N Y N 458 TRP CE2 C Y N 459 TRP CE3 C Y N 460 TRP CZ2 C Y N 461 TRP CZ3 C Y N 462 TRP CH2 C Y N 463 TRP OXT O N N 464 TRP H H N N 465 TRP H2 H N N 466 TRP HA H N N 467 TRP HB2 H N N 468 TRP HB3 H N N 469 TRP HD1 H N N 470 TRP HE1 H N N 471 TRP HE3 H N N 472 TRP HZ2 H N N 473 TRP HZ3 H N N 474 TRP HH2 H N N 475 TRP HXT H N N 476 TYR N N N N 477 TYR CA C N S 478 TYR C C N N 479 TYR O O N N 480 TYR CB C N N 481 TYR CG C Y N 482 TYR CD1 C Y N 483 TYR CD2 C Y N 484 TYR CE1 C Y N 485 TYR CE2 C Y N 486 TYR CZ C Y N 487 TYR OH O N N 488 TYR OXT O N N 489 TYR H H N N 490 TYR H2 H N N 491 TYR HA H N N 492 TYR HB2 H N N 493 TYR HB3 H N N 494 TYR HD1 H N N 495 TYR HD2 H N N 496 TYR HE1 H N N 497 TYR HE2 H N N 498 TYR HH H N N 499 TYR HXT H N N 500 VAL N N N N 501 VAL CA C N S 502 VAL C C N N 503 VAL O O N N 504 VAL CB C N N 505 VAL CG1 C N N 506 VAL CG2 C N N 507 VAL OXT O N N 508 VAL H H N N 509 VAL H2 H N N 510 VAL HA H N N 511 VAL HB H N N 512 VAL HG11 H N N 513 VAL HG12 H N N 514 VAL HG13 H N N 515 VAL HG21 H N N 516 VAL HG22 H N N 517 VAL HG23 H N N 518 VAL HXT H N N 519 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 0Q4 N CA sing N N 1 0Q4 N H sing N N 2 0Q4 N H2 sing N N 3 0Q4 CA C sing N N 4 0Q4 CA CB sing N N 5 0Q4 CA HA sing N N 6 0Q4 C O doub N N 7 0Q4 CB CG sing N N 8 0Q4 CB HB2 sing N N 9 0Q4 CB HB3 sing N N 10 0Q4 CG CD sing N N 11 0Q4 CG HG2 sing N N 12 0Q4 CG HG3 sing N N 13 0Q4 CD NE sing N N 14 0Q4 CD HD2 sing N N 15 0Q4 CD HD3 sing N N 16 0Q4 NE CZ sing N N 17 0Q4 NE HE sing N N 18 0Q4 CZ NH1 sing N N 19 0Q4 CZ NH2 doub N N 20 0Q4 NH1 HH11 sing N N 21 0Q4 NH1 HH12 sing N N 22 0Q4 NH2 HH21 sing N N 23 0Q4 NH2 HH22 sing N N 24 0Q4 N1 CA1 sing N N 25 0Q4 N1 H1 sing N N 26 0Q4 CA1 C1 sing N N 27 0Q4 CA1 CB1 sing N N 28 0Q4 CA1 HA1 sing N N 29 0Q4 C1 O1 doub N N 30 0Q4 CB1 CG1 sing N N 31 0Q4 CB1 CG2 sing N N 32 0Q4 CB1 HB sing N N 33 0Q4 CG1 HG11 sing N N 34 0Q4 CG1 HG12 sing N N 35 0Q4 CG1 HG13 sing N N 36 0Q4 CG2 HG21 sing N N 37 0Q4 CG2 HG22 sing N N 38 0Q4 CG2 HG23 sing N N 39 0Q4 N2 CA2 sing N N 40 0Q4 N2 HN2 sing N N 41 0Q4 CA2 C2 sing N N 42 0Q4 CA2 CB2 sing N N 43 0Q4 CA2 HA2 sing N N 44 0Q4 C2 HC1 sing N N 45 0Q4 C2 HC2 sing N N 46 0Q4 CB2 CG3 sing N N 47 0Q4 CB2 HB1 sing N N 48 0Q4 CB2 HB21 sing N N 49 0Q4 CG3 CD1 sing N N 50 0Q4 CG3 CD2 sing N N 51 0Q4 CG3 HG sing N N 52 0Q4 CD1 HD11 sing N N 53 0Q4 CD1 HD12 sing N N 54 0Q4 CD1 HD13 sing N N 55 0Q4 CD2 HD21 sing N N 56 0Q4 CD2 HD22 sing N N 57 0Q4 CD2 HD23 sing N N 58 0Q4 N3 CA3 sing N N 59 0Q4 N3 H3 sing N N 60 0Q4 CA3 C3 sing N N 61 0Q4 CA3 CB3 sing N N 62 0Q4 CA3 HA3 sing N N 63 0Q4 C3 O2 doub N N 64 0Q4 CB3 CG4 sing N N 65 0Q4 CB3 HB22 sing N N 66 0Q4 CB3 HB31 sing N N 67 0Q4 CG4 CD11 doub Y N 68 0Q4 CG4 CD21 sing Y N 69 0Q4 CD11 CE1 sing Y N 70 0Q4 CD11 HD1 sing N N 71 0Q4 CD21 CE2 doub Y N 72 0Q4 CD21 HD24 sing N N 73 0Q4 CE1 CZ1 doub Y N 74 0Q4 CE1 HE1 sing N N 75 0Q4 CE2 CZ1 sing Y N 76 0Q4 CE2 HE2 sing N N 77 0Q4 CZ1 HZ sing N N 78 0Q4 N4 CA4 sing N N 79 0Q4 N4 H4 sing N N 80 0Q4 CA4 C4 sing N N 81 0Q4 CA4 CB4 sing N N 82 0Q4 CA4 HA4 sing N N 83 0Q4 C4 O3 doub N N 84 0Q4 CB4 CG5 sing N N 85 0Q4 CB4 HB23 sing N N 86 0Q4 CB4 HB32 sing N N 87 0Q4 CG5 CD3 sing N N 88 0Q4 CG5 HG24 sing N N 89 0Q4 CG5 HG31 sing N N 90 0Q4 CD3 OE1 doub N N 91 0Q4 CD3 OE2 sing N N 92 0Q4 OE2 HE21 sing N N 93 0Q4 N5 CA5 sing N N 94 0Q4 N5 H5 sing N N 95 0Q4 CA5 C5 sing N N 96 0Q4 CA5 CB5 sing N N 97 0Q4 CA5 HA5 sing N N 98 0Q4 C5 O4 doub N N 99 0Q4 CB5 HB11 sing N N 100 0Q4 CB5 HB24 sing N N 101 0Q4 CB5 HB33 sing N N 102 0Q4 N6 CA6 sing N N 103 0Q4 N6 H6 sing N N 104 0Q4 CA6 C6 sing N N 105 0Q4 CA6 CB6 sing N N 106 0Q4 CA6 HA6 sing N N 107 0Q4 C6 O5 doub N N 108 0Q4 CB6 CG6 sing N N 109 0Q4 CB6 HB25 sing N N 110 0Q4 CB6 HB34 sing N N 111 0Q4 CG6 CD4 sing N N 112 0Q4 CG6 HG25 sing N N 113 0Q4 CG6 HG32 sing N N 114 0Q4 CD4 CE sing N N 115 0Q4 CD4 HD25 sing N N 116 0Q4 CD4 HD31 sing N N 117 0Q4 CE HE11 sing N N 118 0Q4 CE HE22 sing N N 119 0Q4 CE HE3 sing N N 120 0Q4 N7 HN1 sing N N 121 0Q4 N7 HN21 sing N N 122 0Q4 C N1 sing N N 123 0Q4 C1 N2 sing N N 124 0Q4 C2 N3 sing N N 125 0Q4 C3 N4 sing N N 126 0Q4 C4 N5 sing N N 127 0Q4 C5 N6 sing N N 128 0Q4 C6 N7 sing N N 129 ALA N CA sing N N 130 ALA N H sing N N 131 ALA N H2 sing N N 132 ALA CA C sing N N 133 ALA CA CB sing N N 134 ALA CA HA sing N N 135 ALA C O doub N N 136 ALA C OXT sing N N 137 ALA CB HB1 sing N N 138 ALA CB HB2 sing N N 139 ALA CB HB3 sing N N 140 ALA OXT HXT sing N N 141 ARG N CA sing N N 142 ARG N H sing N N 143 ARG N H2 sing N N 144 ARG CA C sing N N 145 ARG CA CB sing N N 146 ARG CA HA sing N N 147 ARG C O doub N N 148 ARG C OXT sing N N 149 ARG CB CG sing N N 150 ARG CB HB2 sing N N 151 ARG CB HB3 sing N N 152 ARG CG CD sing N N 153 ARG CG HG2 sing N N 154 ARG CG HG3 sing N N 155 ARG CD NE sing N N 156 ARG CD HD2 sing N N 157 ARG CD HD3 sing N N 158 ARG NE CZ sing N N 159 ARG NE HE sing N N 160 ARG CZ NH1 sing N N 161 ARG CZ NH2 doub N N 162 ARG NH1 HH11 sing N N 163 ARG NH1 HH12 sing N N 164 ARG NH2 HH21 sing N N 165 ARG NH2 HH22 sing N N 166 ARG OXT HXT sing N N 167 ASN N CA sing N N 168 ASN N H sing N N 169 ASN N H2 sing N N 170 ASN CA C sing N N 171 ASN CA CB sing N N 172 ASN CA HA sing N N 173 ASN C O doub N N 174 ASN C OXT sing N N 175 ASN CB CG sing N N 176 ASN CB HB2 sing N N 177 ASN CB HB3 sing N N 178 ASN CG OD1 doub N N 179 ASN CG ND2 sing N N 180 ASN ND2 HD21 sing N N 181 ASN ND2 HD22 sing N N 182 ASN OXT HXT sing N N 183 ASP N CA sing N N 184 ASP N H sing N N 185 ASP N H2 sing N N 186 ASP CA C sing N N 187 ASP CA CB sing N N 188 ASP CA HA sing N N 189 ASP C O doub N N 190 ASP C OXT sing N N 191 ASP CB CG sing N N 192 ASP CB HB2 sing N N 193 ASP CB HB3 sing N N 194 ASP CG OD1 doub N N 195 ASP CG OD2 sing N N 196 ASP OD2 HD2 sing N N 197 ASP OXT HXT sing N N 198 CYS N CA sing N N 199 CYS N H sing N N 200 CYS N H2 sing N N 201 CYS CA C sing N N 202 CYS CA CB sing N N 203 CYS CA HA sing N N 204 CYS C O doub N N 205 CYS C OXT sing N N 206 CYS CB SG sing N N 207 CYS CB HB2 sing N N 208 CYS CB HB3 sing N N 209 CYS SG HG sing N N 210 CYS OXT HXT sing N N 211 GLN N CA sing N N 212 GLN N H sing N N 213 GLN N H2 sing N N 214 GLN CA C sing N N 215 GLN CA CB sing N N 216 GLN CA HA sing N N 217 GLN C O doub N N 218 GLN C OXT sing N N 219 GLN CB CG sing N N 220 GLN CB HB2 sing N N 221 GLN CB HB3 sing N N 222 GLN CG CD sing N N 223 GLN CG HG2 sing N N 224 GLN CG HG3 sing N N 225 GLN CD OE1 doub N N 226 GLN CD NE2 sing N N 227 GLN NE2 HE21 sing N N 228 GLN NE2 HE22 sing N N 229 GLN OXT HXT sing N N 230 GLU N CA sing N N 231 GLU N H sing N N 232 GLU N H2 sing N N 233 GLU CA C sing N N 234 GLU CA CB sing N N 235 GLU CA HA sing N N 236 GLU C O doub N N 237 GLU C OXT sing N N 238 GLU CB CG sing N N 239 GLU CB HB2 sing N N 240 GLU CB HB3 sing N N 241 GLU CG CD sing N N 242 GLU CG HG2 sing N N 243 GLU CG HG3 sing N N 244 GLU CD OE1 doub N N 245 GLU CD OE2 sing N N 246 GLU OE2 HE2 sing N N 247 GLU OXT HXT sing N N 248 GLY N CA sing N N 249 GLY N H sing N N 250 GLY N H2 sing N N 251 GLY CA C sing N N 252 GLY CA HA2 sing N N 253 GLY CA HA3 sing N N 254 GLY C O doub N N 255 GLY C OXT sing N N 256 GLY OXT HXT sing N N 257 HIS N CA sing N N 258 HIS N H sing N N 259 HIS N H2 sing N N 260 HIS CA C sing N N 261 HIS CA CB sing N N 262 HIS CA HA sing N N 263 HIS C O doub N N 264 HIS C OXT sing N N 265 HIS CB CG sing N N 266 HIS CB HB2 sing N N 267 HIS CB HB3 sing N N 268 HIS CG ND1 sing Y N 269 HIS CG CD2 doub Y N 270 HIS ND1 CE1 doub Y N 271 HIS ND1 HD1 sing N N 272 HIS CD2 NE2 sing Y N 273 HIS CD2 HD2 sing N N 274 HIS CE1 NE2 sing Y N 275 HIS CE1 HE1 sing N N 276 HIS NE2 HE2 sing N N 277 HIS OXT HXT sing N N 278 HOH O H1 sing N N 279 HOH O H2 sing N N 280 ILE N CA sing N N 281 ILE N H sing N N 282 ILE N H2 sing N N 283 ILE CA C sing N N 284 ILE CA CB sing N N 285 ILE CA HA sing N N 286 ILE C O doub N N 287 ILE C OXT sing N N 288 ILE CB CG1 sing N N 289 ILE CB CG2 sing N N 290 ILE CB HB sing N N 291 ILE CG1 CD1 sing N N 292 ILE CG1 HG12 sing N N 293 ILE CG1 HG13 sing N N 294 ILE CG2 HG21 sing N N 295 ILE CG2 HG22 sing N N 296 ILE CG2 HG23 sing N N 297 ILE CD1 HD11 sing N N 298 ILE CD1 HD12 sing N N 299 ILE CD1 HD13 sing N N 300 ILE OXT HXT sing N N 301 LEU N CA sing N N 302 LEU N H sing N N 303 LEU N H2 sing N N 304 LEU CA C sing N N 305 LEU CA CB sing N N 306 LEU CA HA sing N N 307 LEU C O doub N N 308 LEU C OXT sing N N 309 LEU CB CG sing N N 310 LEU CB HB2 sing N N 311 LEU CB HB3 sing N N 312 LEU CG CD1 sing N N 313 LEU CG CD2 sing N N 314 LEU CG HG sing N N 315 LEU CD1 HD11 sing N N 316 LEU CD1 HD12 sing N N 317 LEU CD1 HD13 sing N N 318 LEU CD2 HD21 sing N N 319 LEU CD2 HD22 sing N N 320 LEU CD2 HD23 sing N N 321 LEU OXT HXT sing N N 322 LYS N CA sing N N 323 LYS N H sing N N 324 LYS N H2 sing N N 325 LYS CA C sing N N 326 LYS CA CB sing N N 327 LYS CA HA sing N N 328 LYS C O doub N N 329 LYS C OXT sing N N 330 LYS CB CG sing N N 331 LYS CB HB2 sing N N 332 LYS CB HB3 sing N N 333 LYS CG CD sing N N 334 LYS CG HG2 sing N N 335 LYS CG HG3 sing N N 336 LYS CD CE sing N N 337 LYS CD HD2 sing N N 338 LYS CD HD3 sing N N 339 LYS CE NZ sing N N 340 LYS CE HE2 sing N N 341 LYS CE HE3 sing N N 342 LYS NZ HZ1 sing N N 343 LYS NZ HZ2 sing N N 344 LYS NZ HZ3 sing N N 345 LYS OXT HXT sing N N 346 MET N CA sing N N 347 MET N H sing N N 348 MET N H2 sing N N 349 MET CA C sing N N 350 MET CA CB sing N N 351 MET CA HA sing N N 352 MET C O doub N N 353 MET C OXT sing N N 354 MET CB CG sing N N 355 MET CB HB2 sing N N 356 MET CB HB3 sing N N 357 MET CG SD sing N N 358 MET CG HG2 sing N N 359 MET CG HG3 sing N N 360 MET SD CE sing N N 361 MET CE HE1 sing N N 362 MET CE HE2 sing N N 363 MET CE HE3 sing N N 364 MET OXT HXT sing N N 365 PHE N CA sing N N 366 PHE N H sing N N 367 PHE N H2 sing N N 368 PHE CA C sing N N 369 PHE CA CB sing N N 370 PHE CA HA sing N N 371 PHE C O doub N N 372 PHE C OXT sing N N 373 PHE CB CG sing N N 374 PHE CB HB2 sing N N 375 PHE CB HB3 sing N N 376 PHE CG CD1 doub Y N 377 PHE CG CD2 sing Y N 378 PHE CD1 CE1 sing Y N 379 PHE CD1 HD1 sing N N 380 PHE CD2 CE2 doub Y N 381 PHE CD2 HD2 sing N N 382 PHE CE1 CZ doub Y N 383 PHE CE1 HE1 sing N N 384 PHE CE2 CZ sing Y N 385 PHE CE2 HE2 sing N N 386 PHE CZ HZ sing N N 387 PHE OXT HXT sing N N 388 PRO N CA sing N N 389 PRO N CD sing N N 390 PRO N H sing N N 391 PRO CA C sing N N 392 PRO CA CB sing N N 393 PRO CA HA sing N N 394 PRO C O doub N N 395 PRO C OXT sing N N 396 PRO CB CG sing N N 397 PRO CB HB2 sing N N 398 PRO CB HB3 sing N N 399 PRO CG CD sing N N 400 PRO CG HG2 sing N N 401 PRO CG HG3 sing N N 402 PRO CD HD2 sing N N 403 PRO CD HD3 sing N N 404 PRO OXT HXT sing N N 405 SER N CA sing N N 406 SER N H sing N N 407 SER N H2 sing N N 408 SER CA C sing N N 409 SER CA CB sing N N 410 SER CA HA sing N N 411 SER C O doub N N 412 SER C OXT sing N N 413 SER CB OG sing N N 414 SER CB HB2 sing N N 415 SER CB HB3 sing N N 416 SER OG HG sing N N 417 SER OXT HXT sing N N 418 THR N CA sing N N 419 THR N H sing N N 420 THR N H2 sing N N 421 THR CA C sing N N 422 THR CA CB sing N N 423 THR CA HA sing N N 424 THR C O doub N N 425 THR C OXT sing N N 426 THR CB OG1 sing N N 427 THR CB CG2 sing N N 428 THR CB HB sing N N 429 THR OG1 HG1 sing N N 430 THR CG2 HG21 sing N N 431 THR CG2 HG22 sing N N 432 THR CG2 HG23 sing N N 433 THR OXT HXT sing N N 434 TRP N CA sing N N 435 TRP N H sing N N 436 TRP N H2 sing N N 437 TRP CA C sing N N 438 TRP CA CB sing N N 439 TRP CA HA sing N N 440 TRP C O doub N N 441 TRP C OXT sing N N 442 TRP CB CG sing N N 443 TRP CB HB2 sing N N 444 TRP CB HB3 sing N N 445 TRP CG CD1 doub Y N 446 TRP CG CD2 sing Y N 447 TRP CD1 NE1 sing Y N 448 TRP CD1 HD1 sing N N 449 TRP CD2 CE2 doub Y N 450 TRP CD2 CE3 sing Y N 451 TRP NE1 CE2 sing Y N 452 TRP NE1 HE1 sing N N 453 TRP CE2 CZ2 sing Y N 454 TRP CE3 CZ3 doub Y N 455 TRP CE3 HE3 sing N N 456 TRP CZ2 CH2 doub Y N 457 TRP CZ2 HZ2 sing N N 458 TRP CZ3 CH2 sing Y N 459 TRP CZ3 HZ3 sing N N 460 TRP CH2 HH2 sing N N 461 TRP OXT HXT sing N N 462 TYR N CA sing N N 463 TYR N H sing N N 464 TYR N H2 sing N N 465 TYR CA C sing N N 466 TYR CA CB sing N N 467 TYR CA HA sing N N 468 TYR C O doub N N 469 TYR C OXT sing N N 470 TYR CB CG sing N N 471 TYR CB HB2 sing N N 472 TYR CB HB3 sing N N 473 TYR CG CD1 doub Y N 474 TYR CG CD2 sing Y N 475 TYR CD1 CE1 sing Y N 476 TYR CD1 HD1 sing N N 477 TYR CD2 CE2 doub Y N 478 TYR CD2 HD2 sing N N 479 TYR CE1 CZ doub Y N 480 TYR CE1 HE1 sing N N 481 TYR CE2 CZ sing Y N 482 TYR CE2 HE2 sing N N 483 TYR CZ OH sing N N 484 TYR OH HH sing N N 485 TYR OXT HXT sing N N 486 VAL N CA sing N N 487 VAL N H sing N N 488 VAL N H2 sing N N 489 VAL CA C sing N N 490 VAL CA CB sing N N 491 VAL CA HA sing N N 492 VAL C O doub N N 493 VAL C OXT sing N N 494 VAL CB CG1 sing N N 495 VAL CB CG2 sing N N 496 VAL CB HB sing N N 497 VAL CG1 HG11 sing N N 498 VAL CG1 HG12 sing N N 499 VAL CG1 HG13 sing N N 500 VAL CG2 HG21 sing N N 501 VAL CG2 HG22 sing N N 502 VAL CG2 HG23 sing N N 503 VAL OXT HXT sing N N 504 # _atom_sites.entry_id 1EBK _atom_sites.fract_transf_matrix[1][1] 0.016832 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016142 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.019290 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_