data_1EBY # _entry.id 1EBY # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.385 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1EBY pdb_00001eby 10.2210/pdb1eby/pdb RCSB RCSB010441 ? ? WWPDB D_1000010441 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2002-06-26 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-02-07 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' struct_ref_seq_dif 5 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_ref_seq_dif.details' 4 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1EBY _pdbx_database_status.recvd_initial_deposition_date 2000-01-25 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1AJV ;1AJV contains the same protein complexed with the cyclic sulfamide inhibitor aha006 ; unspecified PDB 1AJX ;1AJX contains the same protein complexed with the cyclic urea inhibitor aha001 ; unspecified PDB 1D4I ;1D4I contains the same protein complexed with the inhibitor bea425 ; unspecified PDB 1D4H ;1D4H contains the same protein complexed with the inhibitor bea435 ; unspecified PDB 1D4J ;1D4J contains the same protein complexed with the inhibitor msl370 ; unspecified PDB 1EBW 'HIV-1 protease in complex with the inhibitor bea322' unspecified PDB 1EBZ 'HIV-1 protease in complex with the inhibitor bea388' unspecified PDB 1EC0 'HIV-1 protease in complex with the inhibitor bea403' unspecified PDB 1EC1 'HIV-1 protease in complex with the inhibitor bea409' unspecified PDB 1EC2 'HIV-1 protease in complex with the inhibitor bea428' unspecified PDB 1EC3 'HIV-1 protease in complex with the inhibitor msa367' unspecified # _audit_author.name 'Unge, T.' _audit_author.pdbx_ordinal 1 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Optimization of P1-P3 groups in symmetric and asymmetric HIV-1 protease inhibitors' Eur.J.Biochem. 270 1746 1758 2003 EJBCAI IX 0014-2956 0262 ? 12694187 10.1046/j.1432-1033.2003.03533.x 1 ;Symmetric fluoro-substituted diol-based HIV protease inhibitors. Ortho-fluorinated and meta-fluorinated P1/P1'-benzyloxy side groups significantly improve the antiviral activity and preserve binding efficacy ; Eur.J.Biochem. 271 4594 4602 2004 EJBCAI IX 0014-2956 0262 ? 15560801 10.1111/j.1432-1033.2004.04431.x # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Andersson, H.O.' 1 ? primary 'Fridborg, K.' 2 ? primary 'Lowgren, S.' 3 ? primary 'Alterman, M.' 4 ? primary 'Muhlman, A.' 5 ? primary 'Bjorsne, M.' 6 ? primary 'Garg, N.' 7 ? primary 'Kvarnstrom, I.' 8 ? primary 'Schaal, W.' 9 ? primary 'Classon, B.' 10 ? primary 'Karlen, A.' 11 ? primary 'Danielsson, U.H.' 12 ? primary 'Ahlsen, G.' 13 ? primary 'Nillroth, U.' 14 ? primary 'Vrang, L.' 15 ? primary 'Oberg, B.' 16 ? primary 'Samuelsson, B.' 17 ? primary 'Hallberg, A.' 18 ? primary 'Unge, T.' 19 ? 1 'Lindberg, J.' 20 ? 1 'Pyring, D.' 21 ? 1 'Lowgren, S.' 22 ? 1 'Rosenquist, A.' 23 ? 1 'Zuccarello, G.' 24 ? 1 'Kvarnstrom, I.' 25 ? 1 'Zhang, H.' 26 ? 1 'Vrang, L.' 27 ? 1 'Classon, B.' 28 ? 1 'Hallberg, A.' 29 ? 1 'Samuelsson, B.' 30 ? 1 'Unge, T.' 31 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'HIV-1 PROTEASE' 10830.781 2 3.4.23.16 ? 'FRAGMENT 69-167' ? 2 non-polymer syn 'N,N-[2,5-O-DIBENZYL-GLUCARYL]-DI-[1-AMINO-INDAN-2-OL]' 652.733 1 ? ? ? ? 3 water nat water 18.015 95 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMNLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPT PVNIIGRNLLTQIGCTLNF ; _entity_poly.pdbx_seq_one_letter_code_can ;PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMNLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPT PVNIIGRNLLTQIGCTLNF ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'N,N-[2,5-O-DIBENZYL-GLUCARYL]-DI-[1-AMINO-INDAN-2-OL]' BEB 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 PRO n 1 2 GLN n 1 3 ILE n 1 4 THR n 1 5 LEU n 1 6 TRP n 1 7 GLN n 1 8 ARG n 1 9 PRO n 1 10 LEU n 1 11 VAL n 1 12 THR n 1 13 ILE n 1 14 LYS n 1 15 ILE n 1 16 GLY n 1 17 GLY n 1 18 GLN n 1 19 LEU n 1 20 LYS n 1 21 GLU n 1 22 ALA n 1 23 LEU n 1 24 LEU n 1 25 ASP n 1 26 THR n 1 27 GLY n 1 28 ALA n 1 29 ASP n 1 30 ASP n 1 31 THR n 1 32 VAL n 1 33 LEU n 1 34 GLU n 1 35 GLU n 1 36 MET n 1 37 ASN n 1 38 LEU n 1 39 PRO n 1 40 GLY n 1 41 ARG n 1 42 TRP n 1 43 LYS n 1 44 PRO n 1 45 LYS n 1 46 MET n 1 47 ILE n 1 48 GLY n 1 49 GLY n 1 50 ILE n 1 51 GLY n 1 52 GLY n 1 53 PHE n 1 54 ILE n 1 55 LYS n 1 56 VAL n 1 57 ARG n 1 58 GLN n 1 59 TYR n 1 60 ASP n 1 61 GLN n 1 62 ILE n 1 63 LEU n 1 64 ILE n 1 65 GLU n 1 66 ILE n 1 67 CYS n 1 68 GLY n 1 69 HIS n 1 70 LYS n 1 71 ALA n 1 72 ILE n 1 73 GLY n 1 74 THR n 1 75 VAL n 1 76 LEU n 1 77 VAL n 1 78 GLY n 1 79 PRO n 1 80 THR n 1 81 PRO n 1 82 VAL n 1 83 ASN n 1 84 ILE n 1 85 ILE n 1 86 GLY n 1 87 ARG n 1 88 ASN n 1 89 LEU n 1 90 LEU n 1 91 THR n 1 92 GLN n 1 93 ILE n 1 94 GLY n 1 95 CYS n 1 96 THR n 1 97 LEU n 1 98 ASN n 1 99 PHE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Lentivirus _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Human immunodeficiency virus 1' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 11676 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details PET11C _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BEB non-polymer . 'N,N-[2,5-O-DIBENZYL-GLUCARYL]-DI-[1-AMINO-INDAN-2-OL]' 'INHIBITOR BEA369' 'C38 H40 N2 O8' 652.733 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 PRO 1 1 1 PRO PRO A . n A 1 2 GLN 2 2 2 GLN GLN A . n A 1 3 ILE 3 3 3 ILE ILE A . n A 1 4 THR 4 4 4 THR THR A . n A 1 5 LEU 5 5 5 LEU LEU A . n A 1 6 TRP 6 6 6 TRP TRP A . n A 1 7 GLN 7 7 7 GLN GLN A . n A 1 8 ARG 8 8 8 ARG ARG A . n A 1 9 PRO 9 9 9 PRO PRO A . n A 1 10 LEU 10 10 10 LEU LEU A . n A 1 11 VAL 11 11 11 VAL VAL A . n A 1 12 THR 12 12 12 THR THR A . n A 1 13 ILE 13 13 13 ILE ILE A . n A 1 14 LYS 14 14 14 LYS LYS A . n A 1 15 ILE 15 15 15 ILE ILE A . n A 1 16 GLY 16 16 16 GLY GLY A . n A 1 17 GLY 17 17 17 GLY GLY A . n A 1 18 GLN 18 18 18 GLN GLN A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 LYS 20 20 20 LYS LYS A . n A 1 21 GLU 21 21 21 GLU GLU A . n A 1 22 ALA 22 22 22 ALA ALA A . n A 1 23 LEU 23 23 23 LEU LEU A . n A 1 24 LEU 24 24 24 LEU LEU A . n A 1 25 ASP 25 25 25 ASP ASP A . n A 1 26 THR 26 26 26 THR THR A . n A 1 27 GLY 27 27 27 GLY GLY A . n A 1 28 ALA 28 28 28 ALA ALA A . n A 1 29 ASP 29 29 29 ASP ASP A . n A 1 30 ASP 30 30 30 ASP ASP A . n A 1 31 THR 31 31 31 THR THR A . n A 1 32 VAL 32 32 32 VAL VAL A . n A 1 33 LEU 33 33 33 LEU LEU A . n A 1 34 GLU 34 34 34 GLU GLU A . n A 1 35 GLU 35 35 35 GLU GLU A . n A 1 36 MET 36 36 36 MET MET A . n A 1 37 ASN 37 37 37 ASN ASN A . n A 1 38 LEU 38 38 38 LEU LEU A . n A 1 39 PRO 39 39 39 PRO PRO A . n A 1 40 GLY 40 40 40 GLY GLY A . n A 1 41 ARG 41 41 41 ARG ARG A . n A 1 42 TRP 42 42 42 TRP TRP A . n A 1 43 LYS 43 43 43 LYS LYS A . n A 1 44 PRO 44 44 44 PRO PRO A . n A 1 45 LYS 45 45 45 LYS LYS A . n A 1 46 MET 46 46 46 MET MET A . n A 1 47 ILE 47 47 47 ILE ILE A . n A 1 48 GLY 48 48 48 GLY GLY A . n A 1 49 GLY 49 49 49 GLY GLY A . n A 1 50 ILE 50 50 50 ILE ILE A . n A 1 51 GLY 51 51 51 GLY GLY A . n A 1 52 GLY 52 52 52 GLY GLY A . n A 1 53 PHE 53 53 53 PHE PHE A . n A 1 54 ILE 54 54 54 ILE ILE A . n A 1 55 LYS 55 55 55 LYS LYS A . n A 1 56 VAL 56 56 56 VAL VAL A . n A 1 57 ARG 57 57 57 ARG ARG A . n A 1 58 GLN 58 58 58 GLN GLN A . n A 1 59 TYR 59 59 59 TYR TYR A . n A 1 60 ASP 60 60 60 ASP ASP A . n A 1 61 GLN 61 61 61 GLN GLN A . n A 1 62 ILE 62 62 62 ILE ILE A . n A 1 63 LEU 63 63 63 LEU LEU A . n A 1 64 ILE 64 64 64 ILE ILE A . n A 1 65 GLU 65 65 65 GLU GLU A . n A 1 66 ILE 66 66 66 ILE ILE A . n A 1 67 CYS 67 67 67 CYS CYS A . n A 1 68 GLY 68 68 68 GLY GLY A . n A 1 69 HIS 69 69 69 HIS HIS A . n A 1 70 LYS 70 70 70 LYS LYS A . n A 1 71 ALA 71 71 71 ALA ALA A . n A 1 72 ILE 72 72 72 ILE ILE A . n A 1 73 GLY 73 73 73 GLY GLY A . n A 1 74 THR 74 74 74 THR THR A . n A 1 75 VAL 75 75 75 VAL VAL A . n A 1 76 LEU 76 76 76 LEU LEU A . n A 1 77 VAL 77 77 77 VAL VAL A . n A 1 78 GLY 78 78 78 GLY GLY A . n A 1 79 PRO 79 79 79 PRO PRO A . n A 1 80 THR 80 80 80 THR THR A . n A 1 81 PRO 81 81 81 PRO PRO A . n A 1 82 VAL 82 82 82 VAL VAL A . n A 1 83 ASN 83 83 83 ASN ASN A . n A 1 84 ILE 84 84 84 ILE ILE A . n A 1 85 ILE 85 85 85 ILE ILE A . n A 1 86 GLY 86 86 86 GLY GLY A . n A 1 87 ARG 87 87 87 ARG ARG A . n A 1 88 ASN 88 88 88 ASN ASN A . n A 1 89 LEU 89 89 89 LEU LEU A . n A 1 90 LEU 90 90 90 LEU LEU A . n A 1 91 THR 91 91 91 THR THR A . n A 1 92 GLN 92 92 92 GLN GLN A . n A 1 93 ILE 93 93 93 ILE ILE A . n A 1 94 GLY 94 94 94 GLY GLY A . n A 1 95 CYS 95 95 95 CYS CYS A . n A 1 96 THR 96 96 96 THR THR A . n A 1 97 LEU 97 97 97 LEU LEU A . n A 1 98 ASN 98 98 98 ASN ASN A . n A 1 99 PHE 99 99 99 PHE PHE A . n B 1 1 PRO 1 101 101 PRO PRO B . n B 1 2 GLN 2 102 102 GLN GLN B . n B 1 3 ILE 3 103 103 ILE ILE B . n B 1 4 THR 4 104 104 THR THR B . n B 1 5 LEU 5 105 105 LEU LEU B . n B 1 6 TRP 6 106 106 TRP TRP B . n B 1 7 GLN 7 107 107 GLN GLN B . n B 1 8 ARG 8 108 108 ARG ARG B . n B 1 9 PRO 9 109 109 PRO PRO B . n B 1 10 LEU 10 110 110 LEU LEU B . n B 1 11 VAL 11 111 111 VAL VAL B . n B 1 12 THR 12 112 112 THR THR B . n B 1 13 ILE 13 113 113 ILE ILE B . n B 1 14 LYS 14 114 114 LYS LYS B . n B 1 15 ILE 15 115 115 ILE ILE B . n B 1 16 GLY 16 116 116 GLY GLY B . n B 1 17 GLY 17 117 117 GLY GLY B . n B 1 18 GLN 18 118 118 GLN GLN B . n B 1 19 LEU 19 119 119 LEU LEU B . n B 1 20 LYS 20 120 120 LYS LYS B . n B 1 21 GLU 21 121 121 GLU GLU B . n B 1 22 ALA 22 122 122 ALA ALA B . n B 1 23 LEU 23 123 123 LEU LEU B . n B 1 24 LEU 24 124 124 LEU LEU B . n B 1 25 ASP 25 125 125 ASP ASP B . n B 1 26 THR 26 126 126 THR THR B . n B 1 27 GLY 27 127 127 GLY GLY B . n B 1 28 ALA 28 128 128 ALA ALA B . n B 1 29 ASP 29 129 129 ASP ASP B . n B 1 30 ASP 30 130 130 ASP ASP B . n B 1 31 THR 31 131 131 THR THR B . n B 1 32 VAL 32 132 132 VAL VAL B . n B 1 33 LEU 33 133 133 LEU LEU B . n B 1 34 GLU 34 134 134 GLU GLU B . n B 1 35 GLU 35 135 135 GLU GLU B . n B 1 36 MET 36 136 136 MET MET B . n B 1 37 ASN 37 137 137 ASN ASN B . n B 1 38 LEU 38 138 138 LEU LEU B . n B 1 39 PRO 39 139 139 PRO PRO B . n B 1 40 GLY 40 140 140 GLY GLY B . n B 1 41 ARG 41 141 141 ARG ARG B . n B 1 42 TRP 42 142 142 TRP TRP B . n B 1 43 LYS 43 143 143 LYS LYS B . n B 1 44 PRO 44 144 144 PRO PRO B . n B 1 45 LYS 45 145 145 LYS LYS B . n B 1 46 MET 46 146 146 MET MET B . n B 1 47 ILE 47 147 147 ILE ILE B . n B 1 48 GLY 48 148 148 GLY GLY B . n B 1 49 GLY 49 149 149 GLY GLY B . n B 1 50 ILE 50 150 150 ILE ILE B . n B 1 51 GLY 51 151 151 GLY GLY B . n B 1 52 GLY 52 152 152 GLY GLY B . n B 1 53 PHE 53 153 153 PHE PHE B . n B 1 54 ILE 54 154 154 ILE ILE B . n B 1 55 LYS 55 155 155 LYS LYS B . n B 1 56 VAL 56 156 156 VAL VAL B . n B 1 57 ARG 57 157 157 ARG ARG B . n B 1 58 GLN 58 158 158 GLN GLN B . n B 1 59 TYR 59 159 159 TYR TYR B . n B 1 60 ASP 60 160 160 ASP ASP B . n B 1 61 GLN 61 161 161 GLN GLN B . n B 1 62 ILE 62 162 162 ILE ILE B . n B 1 63 LEU 63 163 163 LEU LEU B . n B 1 64 ILE 64 164 164 ILE ILE B . n B 1 65 GLU 65 165 165 GLU GLU B . n B 1 66 ILE 66 166 166 ILE ILE B . n B 1 67 CYS 67 167 167 CYS CYS B . n B 1 68 GLY 68 168 168 GLY GLY B . n B 1 69 HIS 69 169 169 HIS HIS B . n B 1 70 LYS 70 170 170 LYS LYS B . n B 1 71 ALA 71 171 171 ALA ALA B . n B 1 72 ILE 72 172 172 ILE ILE B . n B 1 73 GLY 73 173 173 GLY GLY B . n B 1 74 THR 74 174 174 THR THR B . n B 1 75 VAL 75 175 175 VAL VAL B . n B 1 76 LEU 76 176 176 LEU LEU B . n B 1 77 VAL 77 177 177 VAL VAL B . n B 1 78 GLY 78 178 178 GLY GLY B . n B 1 79 PRO 79 179 179 PRO PRO B . n B 1 80 THR 80 180 180 THR THR B . n B 1 81 PRO 81 181 181 PRO PRO B . n B 1 82 VAL 82 182 182 VAL VAL B . n B 1 83 ASN 83 183 183 ASN ASN B . n B 1 84 ILE 84 184 184 ILE ILE B . n B 1 85 ILE 85 185 185 ILE ILE B . n B 1 86 GLY 86 186 186 GLY GLY B . n B 1 87 ARG 87 187 187 ARG ARG B . n B 1 88 ASN 88 188 188 ASN ASN B . n B 1 89 LEU 89 189 189 LEU LEU B . n B 1 90 LEU 90 190 190 LEU LEU B . n B 1 91 THR 91 191 191 THR THR B . n B 1 92 GLN 92 192 192 GLN GLN B . n B 1 93 ILE 93 193 193 ILE ILE B . n B 1 94 GLY 94 194 194 GLY GLY B . n B 1 95 CYS 95 195 195 CYS CYS B . n B 1 96 THR 96 196 196 THR THR B . n B 1 97 LEU 97 197 197 LEU LEU B . n B 1 98 ASN 98 198 198 ASN ASN B . n B 1 99 PHE 99 199 199 PHE PHE B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 BEB 1 501 501 BEB BEB B . D 3 HOH 1 301 301 HOH HOH A . D 3 HOH 2 302 302 HOH HOH A . D 3 HOH 3 305 305 HOH HOH A . D 3 HOH 4 308 308 HOH HOH A . D 3 HOH 5 310 310 HOH HOH A . D 3 HOH 6 311 311 HOH HOH A . D 3 HOH 7 312 312 HOH HOH A . D 3 HOH 8 313 313 HOH HOH A . D 3 HOH 9 314 314 HOH HOH A . D 3 HOH 10 315 315 HOH HOH A . D 3 HOH 11 317 317 HOH HOH A . D 3 HOH 12 320 320 HOH HOH A . D 3 HOH 13 321 321 HOH HOH A . D 3 HOH 14 323 323 HOH HOH A . D 3 HOH 15 325 325 HOH HOH A . D 3 HOH 16 326 326 HOH HOH A . D 3 HOH 17 332 332 HOH HOH A . D 3 HOH 18 335 335 HOH HOH A . D 3 HOH 19 344 344 HOH HOH A . D 3 HOH 20 345 345 HOH HOH A . D 3 HOH 21 346 346 HOH HOH A . D 3 HOH 22 348 348 HOH HOH A . D 3 HOH 23 351 351 HOH HOH A . D 3 HOH 24 356 356 HOH HOH A . D 3 HOH 25 359 359 HOH HOH A . D 3 HOH 26 362 362 HOH HOH A . D 3 HOH 27 366 366 HOH HOH A . D 3 HOH 28 368 368 HOH HOH A . D 3 HOH 29 369 369 HOH HOH A . D 3 HOH 30 370 370 HOH HOH A . D 3 HOH 31 371 371 HOH HOH A . D 3 HOH 32 372 372 HOH HOH A . D 3 HOH 33 378 378 HOH HOH A . D 3 HOH 34 382 382 HOH HOH A . D 3 HOH 35 383 383 HOH HOH A . D 3 HOH 36 385 385 HOH HOH A . D 3 HOH 37 386 386 HOH HOH A . D 3 HOH 38 387 387 HOH HOH A . D 3 HOH 39 394 394 HOH HOH A . D 3 HOH 40 395 395 HOH HOH A . E 3 HOH 1 303 303 HOH HOH B . E 3 HOH 2 304 304 HOH HOH B . E 3 HOH 3 306 306 HOH HOH B . E 3 HOH 4 307 307 HOH HOH B . E 3 HOH 5 309 309 HOH HOH B . E 3 HOH 6 316 316 HOH HOH B . E 3 HOH 7 318 318 HOH HOH B . E 3 HOH 8 319 319 HOH HOH B . E 3 HOH 9 322 322 HOH HOH B . E 3 HOH 10 324 324 HOH HOH B . E 3 HOH 11 327 327 HOH HOH B . E 3 HOH 12 328 328 HOH HOH B . E 3 HOH 13 329 329 HOH HOH B . E 3 HOH 14 330 330 HOH HOH B . E 3 HOH 15 331 331 HOH HOH B . E 3 HOH 16 333 333 HOH HOH B . E 3 HOH 17 334 334 HOH HOH B . E 3 HOH 18 336 336 HOH HOH B . E 3 HOH 19 337 337 HOH HOH B . E 3 HOH 20 338 338 HOH HOH B . E 3 HOH 21 339 339 HOH HOH B . E 3 HOH 22 340 340 HOH HOH B . E 3 HOH 23 341 341 HOH HOH B . E 3 HOH 24 342 342 HOH HOH B . E 3 HOH 25 343 343 HOH HOH B . E 3 HOH 26 347 347 HOH HOH B . E 3 HOH 27 349 349 HOH HOH B . E 3 HOH 28 350 350 HOH HOH B . E 3 HOH 29 352 352 HOH HOH B . E 3 HOH 30 353 353 HOH HOH B . E 3 HOH 31 354 354 HOH HOH B . E 3 HOH 32 355 355 HOH HOH B . E 3 HOH 33 357 357 HOH HOH B . E 3 HOH 34 358 358 HOH HOH B . E 3 HOH 35 360 360 HOH HOH B . E 3 HOH 36 361 361 HOH HOH B . E 3 HOH 37 363 363 HOH HOH B . E 3 HOH 38 364 364 HOH HOH B . E 3 HOH 39 365 365 HOH HOH B . E 3 HOH 40 367 367 HOH HOH B . E 3 HOH 41 373 373 HOH HOH B . E 3 HOH 42 374 374 HOH HOH B . E 3 HOH 43 375 375 HOH HOH B . E 3 HOH 44 376 376 HOH HOH B . E 3 HOH 45 377 377 HOH HOH B . E 3 HOH 46 379 379 HOH HOH B . E 3 HOH 47 380 380 HOH HOH B . E 3 HOH 48 381 381 HOH HOH B . E 3 HOH 49 384 384 HOH HOH B . E 3 HOH 50 388 388 HOH HOH B . E 3 HOH 51 389 389 HOH HOH B . E 3 HOH 52 390 390 HOH HOH B . E 3 HOH 53 391 391 HOH HOH B . E 3 HOH 54 392 392 HOH HOH B . E 3 HOH 55 393 393 HOH HOH B . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DENZO 'data reduction' . ? 1 SCALEPACK 'data scaling' . ? 2 X-PLOR 'model building' . ? 3 CNS refinement 0.9 ? 4 X-PLOR phasing . ? 5 # _cell.entry_id 1EBY _cell.length_a 59.150 _cell.length_b 86.980 _cell.length_c 47.160 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1EBY _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? # _exptl.entry_id 1EBY _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 3 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.80 _exptl_crystal.density_percent_sol 56.08 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.5 _exptl_crystal_grow.pdbx_details ;0.4 M Sodium chloride, 0.05 M MES, 0.02 % (W/V) sodium azide, pH 5.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K ; _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 277 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 1996-07-03 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.386 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'LURE BEAMLINE D41A' _diffrn_source.pdbx_synchrotron_site LURE _diffrn_source.pdbx_synchrotron_beamline D41A _diffrn_source.pdbx_wavelength 1.386 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1EBY _reflns.observed_criterion_sigma_I 1. _reflns.observed_criterion_sigma_F 1. _reflns.d_resolution_low 21.71 _reflns.d_resolution_high 2.294 _reflns.number_obs 10685 _reflns.number_all 11384 _reflns.percent_possible_obs 93.9 _reflns.pdbx_Rmerge_I_obs 0.046 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 12.2 _reflns.B_iso_Wilson_estimate 16.6 _reflns.pdbx_redundancy 2.8 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.29 _reflns_shell.d_res_low 2.44 _reflns_shell.percent_possible_all 93.9 _reflns_shell.Rmerge_I_obs 0.122 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy 1.6 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1657 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1EBY _refine.ls_number_reflns_obs 10685 _refine.ls_number_reflns_all 11384 _refine.pdbx_ls_sigma_I 0. _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 38857615.05 _refine.pdbx_data_cutoff_low_absF 0.00 _refine.ls_d_res_low 21.71 _refine.ls_d_res_high 2.294 _refine.ls_percent_reflns_obs 93.9 _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.185 _refine.ls_R_factor_R_free 0.205 _refine.ls_R_factor_R_free_error 0.009 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.9 _refine.ls_number_reflns_R_free 519 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean 20.8 _refine.aniso_B[1][1] 4.52 _refine.aniso_B[2][2] -5.11 _refine.aniso_B[3][3] 0.60 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.317 _refine.solvent_model_param_bsol 34.53 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'Refined with CNS program system' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1EBY _refine_analyze.Luzzati_coordinate_error_obs 0.24 _refine_analyze.Luzzati_sigma_a_obs 0.20 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.28 _refine_analyze.Luzzati_sigma_a_free 0.22 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1520 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 48 _refine_hist.number_atoms_solvent 95 _refine_hist.number_atoms_total 1663 _refine_hist.d_res_high 2.294 _refine_hist.d_res_low 21.71 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.007 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.2 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 25.8 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.74 ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 3.23 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 4.05 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 8.25 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 6.63 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.29 _refine_ls_shell.d_res_low 2.44 _refine_ls_shell.number_reflns_R_work 1657 _refine_ls_shell.R_factor_R_work 0.226 _refine_ls_shell.percent_reflns_obs 93.9 _refine_ls_shell.R_factor_R_free 0.27 _refine_ls_shell.R_factor_R_free_error 0.031 _refine_ls_shell.percent_reflns_R_free 4.3 _refine_ls_shell.number_reflns_R_free 75 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PROTEIN_REP.PA PROTEIN.TOP 'X-RAY DIFFRACTION' 2 WATER_REP.PARA BEA369.TOP 'X-RAY DIFFRACTION' 3 BEA369.PAR ? 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 1EBY _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1EBY _struct.title 'HIV-1 protease in complex with the inhibitor BEA369' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1EBY _struct_keywords.pdbx_keywords 'HYDROLASE/HYDROLASE INHIBITOR' _struct_keywords.text 'Dimer, protein-inhibitor complex, HYDROLASE-HYDROLASE INHIBITOR COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code POL_HV1B1 _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession P03366 _struct_ref.pdbx_align_begin 69 _struct_ref.pdbx_seq_one_letter_code ;PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPT PVNIIGRNLLTQIGCTLNF ; _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1EBY A 1 ? 99 ? P03366 69 ? 167 ? 1 99 2 1 1EBY B 1 ? 99 ? P03366 69 ? 167 ? 101 199 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1EBY ASN A 37 ? UNP P03366 SER 105 conflict 37 1 2 1EBY ASN B 37 ? UNP P03366 SER 105 conflict 137 2 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5190 ? 1 MORE -31 ? 1 'SSA (A^2)' 9360 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details 'The biological assembly is a dimer' _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 86 ? THR A 91 ? GLY A 86 THR A 91 1 ? 6 HELX_P HELX_P2 2 GLN A 92 ? GLY A 94 ? GLN A 92 GLY A 94 5 ? 3 HELX_P HELX_P3 3 GLY B 86 ? THR B 91 ? GLY B 186 THR B 191 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 8 ? C ? 8 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? parallel B 5 6 ? anti-parallel B 6 7 ? parallel B 7 8 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel C 4 5 ? parallel C 5 6 ? anti-parallel C 6 7 ? parallel C 7 8 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLN A 2 ? ILE A 3 ? GLN A 2 ILE A 3 A 2 THR B 96 ? ASN B 98 ? THR B 196 ASN B 198 A 3 THR A 96 ? ASN A 98 ? THR A 96 ASN A 98 A 4 GLN B 2 ? ILE B 3 ? GLN B 102 ILE B 103 B 1 LYS A 43 ? GLY A 49 ? LYS A 43 GLY A 49 B 2 GLY A 52 ? ILE A 66 ? GLY A 52 ILE A 66 B 3 LEU A 10 ? ILE A 15 ? LEU A 10 ILE A 15 B 4 GLN A 18 ? LEU A 24 ? GLN A 18 LEU A 24 B 5 ILE A 84 ? ILE A 85 ? ILE A 84 ILE A 85 B 6 VAL A 32 ? LEU A 33 ? VAL A 32 LEU A 33 B 7 HIS A 69 ? VAL A 77 ? HIS A 69 VAL A 77 B 8 GLY A 52 ? ILE A 66 ? GLY A 52 ILE A 66 C 1 LYS B 43 ? GLY B 49 ? LYS B 143 GLY B 149 C 2 GLY B 52 ? ILE B 66 ? GLY B 152 ILE B 166 C 3 LEU B 10 ? ILE B 15 ? LEU B 110 ILE B 115 C 4 GLN B 18 ? LEU B 24 ? GLN B 118 LEU B 124 C 5 ILE B 84 ? ILE B 85 ? ILE B 184 ILE B 185 C 6 VAL B 32 ? LEU B 33 ? VAL B 132 LEU B 133 C 7 HIS B 69 ? VAL B 77 ? HIS B 169 VAL B 177 C 8 GLY B 52 ? ILE B 66 ? GLY B 152 ILE B 166 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE A 3 ? N ILE A 3 O LEU B 97 ? O LEU B 197 A 2 3 O ASN B 98 ? O ASN B 198 N THR A 96 ? N THR A 96 A 3 4 O LEU A 97 ? O LEU A 97 N ILE B 3 ? N ILE B 103 B 1 2 N GLY A 49 ? N GLY A 49 O GLY A 52 ? O GLY A 52 B 2 3 N GLU A 65 ? N GLU A 65 O LYS A 14 ? O LYS A 14 B 3 4 N ILE A 15 ? N ILE A 15 O GLN A 18 ? O GLN A 18 B 4 5 O LEU A 23 ? O LEU A 23 N ILE A 85 ? N ILE A 85 B 5 6 N ILE A 84 ? N ILE A 84 O VAL A 32 ? O VAL A 32 B 6 7 N LEU A 33 ? N LEU A 33 O LEU A 76 ? O LEU A 76 B 7 8 O VAL A 77 ? O VAL A 77 N ARG A 57 ? N ARG A 57 C 1 2 N GLY B 49 ? N GLY B 149 O GLY B 52 ? O GLY B 152 C 2 3 N GLU B 65 ? N GLU B 165 O LYS B 14 ? O LYS B 114 C 3 4 N ILE B 15 ? N ILE B 115 O GLN B 18 ? O GLN B 118 C 4 5 O LEU B 23 ? O LEU B 123 N ILE B 85 ? N ILE B 185 C 5 6 N ILE B 84 ? N ILE B 184 O VAL B 32 ? O VAL B 132 C 6 7 N LEU B 33 ? N LEU B 133 O LEU B 76 ? O LEU B 176 C 7 8 O VAL B 77 ? O VAL B 177 N ARG B 57 ? N ARG B 157 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id B _struct_site.pdbx_auth_comp_id BEB _struct_site.pdbx_auth_seq_id 501 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 23 _struct_site.details 'BINDING SITE FOR RESIDUE BEB B 501' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 23 ARG A 8 ? ARG A 8 . ? 1_555 ? 2 AC1 23 ASP A 25 ? ASP A 25 . ? 1_555 ? 3 AC1 23 GLY A 27 ? GLY A 27 . ? 1_555 ? 4 AC1 23 ALA A 28 ? ALA A 28 . ? 1_555 ? 5 AC1 23 ASP A 29 ? ASP A 29 . ? 1_555 ? 6 AC1 23 ASP A 30 ? ASP A 30 . ? 1_555 ? 7 AC1 23 GLY A 48 ? GLY A 48 . ? 1_555 ? 8 AC1 23 GLY A 49 ? GLY A 49 . ? 1_555 ? 9 AC1 23 VAL A 82 ? VAL A 82 . ? 1_555 ? 10 AC1 23 ILE A 84 ? ILE A 84 . ? 1_555 ? 11 AC1 23 ARG B 8 ? ARG B 108 . ? 1_555 ? 12 AC1 23 ASP B 25 ? ASP B 125 . ? 1_555 ? 13 AC1 23 GLY B 27 ? GLY B 127 . ? 1_555 ? 14 AC1 23 ALA B 28 ? ALA B 128 . ? 1_555 ? 15 AC1 23 ASP B 29 ? ASP B 129 . ? 1_555 ? 16 AC1 23 ASP B 30 ? ASP B 130 . ? 1_555 ? 17 AC1 23 VAL B 32 ? VAL B 132 . ? 1_555 ? 18 AC1 23 GLY B 48 ? GLY B 148 . ? 1_555 ? 19 AC1 23 GLY B 49 ? GLY B 149 . ? 1_555 ? 20 AC1 23 PRO B 81 ? PRO B 181 . ? 1_555 ? 21 AC1 23 VAL B 82 ? VAL B 182 . ? 1_555 ? 22 AC1 23 ILE B 84 ? ILE B 184 . ? 1_555 ? 23 AC1 23 HOH E . ? HOH B 316 . ? 1_555 ? # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id GLU _pdbx_validate_torsion.auth_asym_id B _pdbx_validate_torsion.auth_seq_id 135 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -39.61 _pdbx_validate_torsion.psi 128.28 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 BEB C23 C Y N 74 BEB C24 C Y N 75 BEB C25 C Y N 76 BEB C26 C Y N 77 BEB C27 C Y N 78 BEB C28 C Y N 79 BEB C33 C Y N 80 BEB C34 C Y N 81 BEB C35 C Y N 82 BEB C36 C Y N 83 BEB C37 C Y N 84 BEB C38 C Y N 85 BEB C32 C N N 86 BEB O31 O N N 87 BEB C9 C N R 88 BEB C7 C N R 89 BEB C5 C N R 90 BEB C4 C N R 91 BEB C2 C N N 92 BEB O3 O N N 93 BEB N1 N N N 94 BEB O21 O N N 95 BEB C22 C N N 96 BEB O6 O N N 97 BEB O8 O N N 98 BEB C10 C N N 99 BEB O11 O N N 100 BEB N12 N N N 101 BEB C51 C N S 102 BEB C52 C Y N 103 BEB C57 C Y N 104 BEB C53 C Y N 105 BEB C54 C Y N 106 BEB C55 C Y N 107 BEB C59 C N R 108 BEB O60 O N N 109 BEB C56 C Y N 110 BEB C58 C N N 111 BEB C41 C N S 112 BEB C42 C Y N 113 BEB C47 C Y N 114 BEB C43 C Y N 115 BEB C44 C Y N 116 BEB C45 C Y N 117 BEB C49 C N R 118 BEB O50 O N N 119 BEB C46 C Y N 120 BEB C48 C N N 121 BEB H24 H N N 122 BEB H25 H N N 123 BEB H26 H N N 124 BEB H27 H N N 125 BEB H28 H N N 126 BEB H34 H N N 127 BEB H35 H N N 128 BEB H36 H N N 129 BEB H37 H N N 130 BEB H38 H N N 131 BEB H321 H N N 132 BEB H322 H N N 133 BEB H9 H N N 134 BEB H7 H N N 135 BEB H5 H N N 136 BEB H4 H N N 137 BEB HN1 H N N 138 BEB H221 H N N 139 BEB H222 H N N 140 BEB HO6 H N N 141 BEB HO8 H N N 142 BEB H12 H N N 143 BEB H51 H N N 144 BEB H53 H N N 145 BEB H54 H N N 146 BEB H55 H N N 147 BEB H59 H N N 148 BEB H60 H N N 149 BEB H56 H N N 150 BEB H581 H N N 151 BEB H582 H N N 152 BEB H41 H N N 153 BEB H43 H N N 154 BEB H44 H N N 155 BEB H45 H N N 156 BEB H49 H N N 157 BEB H50 H N N 158 BEB H46 H N N 159 BEB H481 H N N 160 BEB H482 H N N 161 CYS N N N N 162 CYS CA C N R 163 CYS C C N N 164 CYS O O N N 165 CYS CB C N N 166 CYS SG S N N 167 CYS OXT O N N 168 CYS H H N N 169 CYS H2 H N N 170 CYS HA H N N 171 CYS HB2 H N N 172 CYS HB3 H N N 173 CYS HG H N N 174 CYS HXT H N N 175 GLN N N N N 176 GLN CA C N S 177 GLN C C N N 178 GLN O O N N 179 GLN CB C N N 180 GLN CG C N N 181 GLN CD C N N 182 GLN OE1 O N N 183 GLN NE2 N N N 184 GLN OXT O N N 185 GLN H H N N 186 GLN H2 H N N 187 GLN HA H N N 188 GLN HB2 H N N 189 GLN HB3 H N N 190 GLN HG2 H N N 191 GLN HG3 H N N 192 GLN HE21 H N N 193 GLN HE22 H N N 194 GLN HXT H N N 195 GLU N N N N 196 GLU CA C N S 197 GLU C C N N 198 GLU O O N N 199 GLU CB C N N 200 GLU CG C N N 201 GLU CD C N N 202 GLU OE1 O N N 203 GLU OE2 O N N 204 GLU OXT O N N 205 GLU H H N N 206 GLU H2 H N N 207 GLU HA H N N 208 GLU HB2 H N N 209 GLU HB3 H N N 210 GLU HG2 H N N 211 GLU HG3 H N N 212 GLU HE2 H N N 213 GLU HXT H N N 214 GLY N N N N 215 GLY CA C N N 216 GLY C C N N 217 GLY O O N N 218 GLY OXT O N N 219 GLY H H N N 220 GLY H2 H N N 221 GLY HA2 H N N 222 GLY HA3 H N N 223 GLY HXT H N N 224 HIS N N N N 225 HIS CA C N S 226 HIS C C N N 227 HIS O O N N 228 HIS CB C N N 229 HIS CG C Y N 230 HIS ND1 N Y N 231 HIS CD2 C Y N 232 HIS CE1 C Y N 233 HIS NE2 N Y N 234 HIS OXT O N N 235 HIS H H N N 236 HIS H2 H N N 237 HIS HA H N N 238 HIS HB2 H N N 239 HIS HB3 H N N 240 HIS HD1 H N N 241 HIS HD2 H N N 242 HIS HE1 H N N 243 HIS HE2 H N N 244 HIS HXT H N N 245 HOH O O N N 246 HOH H1 H N N 247 HOH H2 H N N 248 ILE N N N N 249 ILE CA C N S 250 ILE C C N N 251 ILE O O N N 252 ILE CB C N S 253 ILE CG1 C N N 254 ILE CG2 C N N 255 ILE CD1 C N N 256 ILE OXT O N N 257 ILE H H N N 258 ILE H2 H N N 259 ILE HA H N N 260 ILE HB H N N 261 ILE HG12 H N N 262 ILE HG13 H N N 263 ILE HG21 H N N 264 ILE HG22 H N N 265 ILE HG23 H N N 266 ILE HD11 H N N 267 ILE HD12 H N N 268 ILE HD13 H N N 269 ILE HXT H N N 270 LEU N N N N 271 LEU CA C N S 272 LEU C C N N 273 LEU O O N N 274 LEU CB C N N 275 LEU CG C N N 276 LEU CD1 C N N 277 LEU CD2 C N N 278 LEU OXT O N N 279 LEU H H N N 280 LEU H2 H N N 281 LEU HA H N N 282 LEU HB2 H N N 283 LEU HB3 H N N 284 LEU HG H N N 285 LEU HD11 H N N 286 LEU HD12 H N N 287 LEU HD13 H N N 288 LEU HD21 H N N 289 LEU HD22 H N N 290 LEU HD23 H N N 291 LEU HXT H N N 292 LYS N N N N 293 LYS CA C N S 294 LYS C C N N 295 LYS O O N N 296 LYS CB C N N 297 LYS CG C N N 298 LYS CD C N N 299 LYS CE C N N 300 LYS NZ N N N 301 LYS OXT O N N 302 LYS H H N N 303 LYS H2 H N N 304 LYS HA H N N 305 LYS HB2 H N N 306 LYS HB3 H N N 307 LYS HG2 H N N 308 LYS HG3 H N N 309 LYS HD2 H N N 310 LYS HD3 H N N 311 LYS HE2 H N N 312 LYS HE3 H N N 313 LYS HZ1 H N N 314 LYS HZ2 H N N 315 LYS HZ3 H N N 316 LYS HXT H N N 317 MET N N N N 318 MET CA C N S 319 MET C C N N 320 MET O O N N 321 MET CB C N N 322 MET CG C N N 323 MET SD S N N 324 MET CE C N N 325 MET OXT O N N 326 MET H H N N 327 MET H2 H N N 328 MET HA H N N 329 MET HB2 H N N 330 MET HB3 H N N 331 MET HG2 H N N 332 MET HG3 H N N 333 MET HE1 H N N 334 MET HE2 H N N 335 MET HE3 H N N 336 MET HXT H N N 337 PHE N N N N 338 PHE CA C N S 339 PHE C C N N 340 PHE O O N N 341 PHE CB C N N 342 PHE CG C Y N 343 PHE CD1 C Y N 344 PHE CD2 C Y N 345 PHE CE1 C Y N 346 PHE CE2 C Y N 347 PHE CZ C Y N 348 PHE OXT O N N 349 PHE H H N N 350 PHE H2 H N N 351 PHE HA H N N 352 PHE HB2 H N N 353 PHE HB3 H N N 354 PHE HD1 H N N 355 PHE HD2 H N N 356 PHE HE1 H N N 357 PHE HE2 H N N 358 PHE HZ H N N 359 PHE HXT H N N 360 PRO N N N N 361 PRO CA C N S 362 PRO C C N N 363 PRO O O N N 364 PRO CB C N N 365 PRO CG C N N 366 PRO CD C N N 367 PRO OXT O N N 368 PRO H H N N 369 PRO HA H N N 370 PRO HB2 H N N 371 PRO HB3 H N N 372 PRO HG2 H N N 373 PRO HG3 H N N 374 PRO HD2 H N N 375 PRO HD3 H N N 376 PRO HXT H N N 377 SER N N N N 378 SER CA C N S 379 SER C C N N 380 SER O O N N 381 SER CB C N N 382 SER OG O N N 383 SER OXT O N N 384 SER H H N N 385 SER H2 H N N 386 SER HA H N N 387 SER HB2 H N N 388 SER HB3 H N N 389 SER HG H N N 390 SER HXT H N N 391 THR N N N N 392 THR CA C N S 393 THR C C N N 394 THR O O N N 395 THR CB C N R 396 THR OG1 O N N 397 THR CG2 C N N 398 THR OXT O N N 399 THR H H N N 400 THR H2 H N N 401 THR HA H N N 402 THR HB H N N 403 THR HG1 H N N 404 THR HG21 H N N 405 THR HG22 H N N 406 THR HG23 H N N 407 THR HXT H N N 408 TRP N N N N 409 TRP CA C N S 410 TRP C C N N 411 TRP O O N N 412 TRP CB C N N 413 TRP CG C Y N 414 TRP CD1 C Y N 415 TRP CD2 C Y N 416 TRP NE1 N Y N 417 TRP CE2 C Y N 418 TRP CE3 C Y N 419 TRP CZ2 C Y N 420 TRP CZ3 C Y N 421 TRP CH2 C Y N 422 TRP OXT O N N 423 TRP H H N N 424 TRP H2 H N N 425 TRP HA H N N 426 TRP HB2 H N N 427 TRP HB3 H N N 428 TRP HD1 H N N 429 TRP HE1 H N N 430 TRP HE3 H N N 431 TRP HZ2 H N N 432 TRP HZ3 H N N 433 TRP HH2 H N N 434 TRP HXT H N N 435 TYR N N N N 436 TYR CA C N S 437 TYR C C N N 438 TYR O O N N 439 TYR CB C N N 440 TYR CG C Y N 441 TYR CD1 C Y N 442 TYR CD2 C Y N 443 TYR CE1 C Y N 444 TYR CE2 C Y N 445 TYR CZ C Y N 446 TYR OH O N N 447 TYR OXT O N N 448 TYR H H N N 449 TYR H2 H N N 450 TYR HA H N N 451 TYR HB2 H N N 452 TYR HB3 H N N 453 TYR HD1 H N N 454 TYR HD2 H N N 455 TYR HE1 H N N 456 TYR HE2 H N N 457 TYR HH H N N 458 TYR HXT H N N 459 VAL N N N N 460 VAL CA C N S 461 VAL C C N N 462 VAL O O N N 463 VAL CB C N N 464 VAL CG1 C N N 465 VAL CG2 C N N 466 VAL OXT O N N 467 VAL H H N N 468 VAL H2 H N N 469 VAL HA H N N 470 VAL HB H N N 471 VAL HG11 H N N 472 VAL HG12 H N N 473 VAL HG13 H N N 474 VAL HG21 H N N 475 VAL HG22 H N N 476 VAL HG23 H N N 477 VAL HXT H N N 478 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 BEB C23 C24 doub Y N 70 BEB C23 C28 sing Y N 71 BEB C23 C22 sing N N 72 BEB C24 C25 sing Y N 73 BEB C24 H24 sing N N 74 BEB C25 C26 doub Y N 75 BEB C25 H25 sing N N 76 BEB C26 C27 sing Y N 77 BEB C26 H26 sing N N 78 BEB C27 C28 doub Y N 79 BEB C27 H27 sing N N 80 BEB C28 H28 sing N N 81 BEB C33 C34 doub Y N 82 BEB C33 C38 sing Y N 83 BEB C33 C32 sing N N 84 BEB C34 C35 sing Y N 85 BEB C34 H34 sing N N 86 BEB C35 C36 doub Y N 87 BEB C35 H35 sing N N 88 BEB C36 C37 sing Y N 89 BEB C36 H36 sing N N 90 BEB C37 C38 doub Y N 91 BEB C37 H37 sing N N 92 BEB C38 H38 sing N N 93 BEB C32 O31 sing N N 94 BEB C32 H321 sing N N 95 BEB C32 H322 sing N N 96 BEB O31 C9 sing N N 97 BEB C9 C7 sing N N 98 BEB C9 C10 sing N N 99 BEB C9 H9 sing N N 100 BEB C7 C5 sing N N 101 BEB C7 O8 sing N N 102 BEB C7 H7 sing N N 103 BEB C5 C4 sing N N 104 BEB C5 O6 sing N N 105 BEB C5 H5 sing N N 106 BEB C4 C2 sing N N 107 BEB C4 O21 sing N N 108 BEB C4 H4 sing N N 109 BEB C2 O3 doub N N 110 BEB C2 N1 sing N N 111 BEB N1 C41 sing N N 112 BEB N1 HN1 sing N N 113 BEB O21 C22 sing N N 114 BEB C22 H221 sing N N 115 BEB C22 H222 sing N N 116 BEB O6 HO6 sing N N 117 BEB O8 HO8 sing N N 118 BEB C10 O11 doub N N 119 BEB C10 N12 sing N N 120 BEB N12 C51 sing N N 121 BEB N12 H12 sing N N 122 BEB C51 C52 sing N N 123 BEB C51 C59 sing N N 124 BEB C51 H51 sing N N 125 BEB C52 C57 doub Y N 126 BEB C52 C53 sing Y N 127 BEB C57 C56 sing Y N 128 BEB C57 C58 sing N N 129 BEB C53 C54 doub Y N 130 BEB C53 H53 sing N N 131 BEB C54 C55 sing Y N 132 BEB C54 H54 sing N N 133 BEB C55 C56 doub Y N 134 BEB C55 H55 sing N N 135 BEB C59 O60 sing N N 136 BEB C59 C58 sing N N 137 BEB C59 H59 sing N N 138 BEB O60 H60 sing N N 139 BEB C56 H56 sing N N 140 BEB C58 H581 sing N N 141 BEB C58 H582 sing N N 142 BEB C41 C42 sing N N 143 BEB C41 C49 sing N N 144 BEB C41 H41 sing N N 145 BEB C42 C47 doub Y N 146 BEB C42 C43 sing Y N 147 BEB C47 C46 sing Y N 148 BEB C47 C48 sing N N 149 BEB C43 C44 doub Y N 150 BEB C43 H43 sing N N 151 BEB C44 C45 sing Y N 152 BEB C44 H44 sing N N 153 BEB C45 C46 doub Y N 154 BEB C45 H45 sing N N 155 BEB C49 O50 sing N N 156 BEB C49 C48 sing N N 157 BEB C49 H49 sing N N 158 BEB O50 H50 sing N N 159 BEB C46 H46 sing N N 160 BEB C48 H481 sing N N 161 BEB C48 H482 sing N N 162 CYS N CA sing N N 163 CYS N H sing N N 164 CYS N H2 sing N N 165 CYS CA C sing N N 166 CYS CA CB sing N N 167 CYS CA HA sing N N 168 CYS C O doub N N 169 CYS C OXT sing N N 170 CYS CB SG sing N N 171 CYS CB HB2 sing N N 172 CYS CB HB3 sing N N 173 CYS SG HG sing N N 174 CYS OXT HXT sing N N 175 GLN N CA sing N N 176 GLN N H sing N N 177 GLN N H2 sing N N 178 GLN CA C sing N N 179 GLN CA CB sing N N 180 GLN CA HA sing N N 181 GLN C O doub N N 182 GLN C OXT sing N N 183 GLN CB CG sing N N 184 GLN CB HB2 sing N N 185 GLN CB HB3 sing N N 186 GLN CG CD sing N N 187 GLN CG HG2 sing N N 188 GLN CG HG3 sing N N 189 GLN CD OE1 doub N N 190 GLN CD NE2 sing N N 191 GLN NE2 HE21 sing N N 192 GLN NE2 HE22 sing N N 193 GLN OXT HXT sing N N 194 GLU N CA sing N N 195 GLU N H sing N N 196 GLU N H2 sing N N 197 GLU CA C sing N N 198 GLU CA CB sing N N 199 GLU CA HA sing N N 200 GLU C O doub N N 201 GLU C OXT sing N N 202 GLU CB CG sing N N 203 GLU CB HB2 sing N N 204 GLU CB HB3 sing N N 205 GLU CG CD sing N N 206 GLU CG HG2 sing N N 207 GLU CG HG3 sing N N 208 GLU CD OE1 doub N N 209 GLU CD OE2 sing N N 210 GLU OE2 HE2 sing N N 211 GLU OXT HXT sing N N 212 GLY N CA sing N N 213 GLY N H sing N N 214 GLY N H2 sing N N 215 GLY CA C sing N N 216 GLY CA HA2 sing N N 217 GLY CA HA3 sing N N 218 GLY C O doub N N 219 GLY C OXT sing N N 220 GLY OXT HXT sing N N 221 HIS N CA sing N N 222 HIS N H sing N N 223 HIS N H2 sing N N 224 HIS CA C sing N N 225 HIS CA CB sing N N 226 HIS CA HA sing N N 227 HIS C O doub N N 228 HIS C OXT sing N N 229 HIS CB CG sing N N 230 HIS CB HB2 sing N N 231 HIS CB HB3 sing N N 232 HIS CG ND1 sing Y N 233 HIS CG CD2 doub Y N 234 HIS ND1 CE1 doub Y N 235 HIS ND1 HD1 sing N N 236 HIS CD2 NE2 sing Y N 237 HIS CD2 HD2 sing N N 238 HIS CE1 NE2 sing Y N 239 HIS CE1 HE1 sing N N 240 HIS NE2 HE2 sing N N 241 HIS OXT HXT sing N N 242 HOH O H1 sing N N 243 HOH O H2 sing N N 244 ILE N CA sing N N 245 ILE N H sing N N 246 ILE N H2 sing N N 247 ILE CA C sing N N 248 ILE CA CB sing N N 249 ILE CA HA sing N N 250 ILE C O doub N N 251 ILE C OXT sing N N 252 ILE CB CG1 sing N N 253 ILE CB CG2 sing N N 254 ILE CB HB sing N N 255 ILE CG1 CD1 sing N N 256 ILE CG1 HG12 sing N N 257 ILE CG1 HG13 sing N N 258 ILE CG2 HG21 sing N N 259 ILE CG2 HG22 sing N N 260 ILE CG2 HG23 sing N N 261 ILE CD1 HD11 sing N N 262 ILE CD1 HD12 sing N N 263 ILE CD1 HD13 sing N N 264 ILE OXT HXT sing N N 265 LEU N CA sing N N 266 LEU N H sing N N 267 LEU N H2 sing N N 268 LEU CA C sing N N 269 LEU CA CB sing N N 270 LEU CA HA sing N N 271 LEU C O doub N N 272 LEU C OXT sing N N 273 LEU CB CG sing N N 274 LEU CB HB2 sing N N 275 LEU CB HB3 sing N N 276 LEU CG CD1 sing N N 277 LEU CG CD2 sing N N 278 LEU CG HG sing N N 279 LEU CD1 HD11 sing N N 280 LEU CD1 HD12 sing N N 281 LEU CD1 HD13 sing N N 282 LEU CD2 HD21 sing N N 283 LEU CD2 HD22 sing N N 284 LEU CD2 HD23 sing N N 285 LEU OXT HXT sing N N 286 LYS N CA sing N N 287 LYS N H sing N N 288 LYS N H2 sing N N 289 LYS CA C sing N N 290 LYS CA CB sing N N 291 LYS CA HA sing N N 292 LYS C O doub N N 293 LYS C OXT sing N N 294 LYS CB CG sing N N 295 LYS CB HB2 sing N N 296 LYS CB HB3 sing N N 297 LYS CG CD sing N N 298 LYS CG HG2 sing N N 299 LYS CG HG3 sing N N 300 LYS CD CE sing N N 301 LYS CD HD2 sing N N 302 LYS CD HD3 sing N N 303 LYS CE NZ sing N N 304 LYS CE HE2 sing N N 305 LYS CE HE3 sing N N 306 LYS NZ HZ1 sing N N 307 LYS NZ HZ2 sing N N 308 LYS NZ HZ3 sing N N 309 LYS OXT HXT sing N N 310 MET N CA sing N N 311 MET N H sing N N 312 MET N H2 sing N N 313 MET CA C sing N N 314 MET CA CB sing N N 315 MET CA HA sing N N 316 MET C O doub N N 317 MET C OXT sing N N 318 MET CB CG sing N N 319 MET CB HB2 sing N N 320 MET CB HB3 sing N N 321 MET CG SD sing N N 322 MET CG HG2 sing N N 323 MET CG HG3 sing N N 324 MET SD CE sing N N 325 MET CE HE1 sing N N 326 MET CE HE2 sing N N 327 MET CE HE3 sing N N 328 MET OXT HXT sing N N 329 PHE N CA sing N N 330 PHE N H sing N N 331 PHE N H2 sing N N 332 PHE CA C sing N N 333 PHE CA CB sing N N 334 PHE CA HA sing N N 335 PHE C O doub N N 336 PHE C OXT sing N N 337 PHE CB CG sing N N 338 PHE CB HB2 sing N N 339 PHE CB HB3 sing N N 340 PHE CG CD1 doub Y N 341 PHE CG CD2 sing Y N 342 PHE CD1 CE1 sing Y N 343 PHE CD1 HD1 sing N N 344 PHE CD2 CE2 doub Y N 345 PHE CD2 HD2 sing N N 346 PHE CE1 CZ doub Y N 347 PHE CE1 HE1 sing N N 348 PHE CE2 CZ sing Y N 349 PHE CE2 HE2 sing N N 350 PHE CZ HZ sing N N 351 PHE OXT HXT sing N N 352 PRO N CA sing N N 353 PRO N CD sing N N 354 PRO N H sing N N 355 PRO CA C sing N N 356 PRO CA CB sing N N 357 PRO CA HA sing N N 358 PRO C O doub N N 359 PRO C OXT sing N N 360 PRO CB CG sing N N 361 PRO CB HB2 sing N N 362 PRO CB HB3 sing N N 363 PRO CG CD sing N N 364 PRO CG HG2 sing N N 365 PRO CG HG3 sing N N 366 PRO CD HD2 sing N N 367 PRO CD HD3 sing N N 368 PRO OXT HXT sing N N 369 SER N CA sing N N 370 SER N H sing N N 371 SER N H2 sing N N 372 SER CA C sing N N 373 SER CA CB sing N N 374 SER CA HA sing N N 375 SER C O doub N N 376 SER C OXT sing N N 377 SER CB OG sing N N 378 SER CB HB2 sing N N 379 SER CB HB3 sing N N 380 SER OG HG sing N N 381 SER OXT HXT sing N N 382 THR N CA sing N N 383 THR N H sing N N 384 THR N H2 sing N N 385 THR CA C sing N N 386 THR CA CB sing N N 387 THR CA HA sing N N 388 THR C O doub N N 389 THR C OXT sing N N 390 THR CB OG1 sing N N 391 THR CB CG2 sing N N 392 THR CB HB sing N N 393 THR OG1 HG1 sing N N 394 THR CG2 HG21 sing N N 395 THR CG2 HG22 sing N N 396 THR CG2 HG23 sing N N 397 THR OXT HXT sing N N 398 TRP N CA sing N N 399 TRP N H sing N N 400 TRP N H2 sing N N 401 TRP CA C sing N N 402 TRP CA CB sing N N 403 TRP CA HA sing N N 404 TRP C O doub N N 405 TRP C OXT sing N N 406 TRP CB CG sing N N 407 TRP CB HB2 sing N N 408 TRP CB HB3 sing N N 409 TRP CG CD1 doub Y N 410 TRP CG CD2 sing Y N 411 TRP CD1 NE1 sing Y N 412 TRP CD1 HD1 sing N N 413 TRP CD2 CE2 doub Y N 414 TRP CD2 CE3 sing Y N 415 TRP NE1 CE2 sing Y N 416 TRP NE1 HE1 sing N N 417 TRP CE2 CZ2 sing Y N 418 TRP CE3 CZ3 doub Y N 419 TRP CE3 HE3 sing N N 420 TRP CZ2 CH2 doub Y N 421 TRP CZ2 HZ2 sing N N 422 TRP CZ3 CH2 sing Y N 423 TRP CZ3 HZ3 sing N N 424 TRP CH2 HH2 sing N N 425 TRP OXT HXT sing N N 426 TYR N CA sing N N 427 TYR N H sing N N 428 TYR N H2 sing N N 429 TYR CA C sing N N 430 TYR CA CB sing N N 431 TYR CA HA sing N N 432 TYR C O doub N N 433 TYR C OXT sing N N 434 TYR CB CG sing N N 435 TYR CB HB2 sing N N 436 TYR CB HB3 sing N N 437 TYR CG CD1 doub Y N 438 TYR CG CD2 sing Y N 439 TYR CD1 CE1 sing Y N 440 TYR CD1 HD1 sing N N 441 TYR CD2 CE2 doub Y N 442 TYR CD2 HD2 sing N N 443 TYR CE1 CZ doub Y N 444 TYR CE1 HE1 sing N N 445 TYR CE2 CZ sing Y N 446 TYR CE2 HE2 sing N N 447 TYR CZ OH sing N N 448 TYR OH HH sing N N 449 TYR OXT HXT sing N N 450 VAL N CA sing N N 451 VAL N H sing N N 452 VAL N H2 sing N N 453 VAL CA C sing N N 454 VAL CA CB sing N N 455 VAL CA HA sing N N 456 VAL C O doub N N 457 VAL C OXT sing N N 458 VAL CB CG1 sing N N 459 VAL CB CG2 sing N N 460 VAL CB HB sing N N 461 VAL CG1 HG11 sing N N 462 VAL CG1 HG12 sing N N 463 VAL CG1 HG13 sing N N 464 VAL CG2 HG21 sing N N 465 VAL CG2 HG22 sing N N 466 VAL CG2 HG23 sing N N 467 VAL OXT HXT sing N N 468 # _atom_sites.entry_id 1EBY _atom_sites.fract_transf_matrix[1][1] 0.016906 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011497 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.021204 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_