data_1EC6 # _entry.id 1EC6 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.385 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1EC6 pdb_00001ec6 10.2210/pdb1ec6/pdb NDB PR0022 ? ? RCSB RCSB010449 ? ? WWPDB D_1000010449 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2000-02-21 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2021-02-03 5 'Structure model' 1 4 2024-02-07 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Database references' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' citation_author 2 5 'Structure model' chem_comp_atom 3 5 'Structure model' chem_comp_bond 4 5 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_citation_author.identifier_ORCID' 2 5 'Structure model' '_database_2.pdbx_DOI' 3 5 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1EC6 _pdbx_database_status.recvd_initial_deposition_date 2000-01-25 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Lewis, H.A.' 1 'Musunuru, K.' 2 'Jensen, K.B.' 3 'Edo, C.' 4 'Chen, H.' 5 # _citation.id primary _citation.title 'Sequence-specific RNA binding by a Nova KH domain: implications for paraneoplastic disease and the fragile X syndrome.' _citation.journal_abbrev 'Cell(Cambridge,Mass.)' _citation.journal_volume 100 _citation.page_first 323 _citation.page_last 332 _citation.year 2000 _citation.journal_id_ASTM CELLB5 _citation.country US _citation.journal_id_ISSN 0092-8674 _citation.journal_id_CSD 0998 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 10676814 _citation.pdbx_database_id_DOI '10.1016/S0092-8674(00)80668-6' # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Lewis, H.A.' 1 ? primary 'Musunuru, K.' 2 ? primary 'Jensen, K.B.' 3 ? primary 'Edo, C.' 4 ? primary 'Chen, H.' 5 ? primary 'Darnell, R.B.' 6 ? primary 'Burley, S.K.' 7 0000-0002-2487-9713 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn '20-MER RNA HAIRPIN' 6341.845 2 ? ? ? ? 2 polymer man 'RNA-BINDING PROTEIN NOVA-2' 9437.835 2 ? ? KH3 ? 3 water nat water 18.015 170 ? ? ? ? # _entity_name_com.entity_id 2 _entity_name_com.name 'ASTROCYTIC NOVA-LIKE RNA-BINDING PROTEIN' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polyribonucleotide no no GAGGACCUAGAUCACCCCUC GAGGACCUAGAUCACCCCUC C,D ? 2 'polypeptide(L)' no no ;MKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQYLISQRVTYEQGVR ASNPQKV ; ;MKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQYLISQRVTYEQGVR ASNPQKV ; A,B ? # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 A n 1 3 G n 1 4 G n 1 5 A n 1 6 C n 1 7 C n 1 8 U n 1 9 A n 1 10 G n 1 11 A n 1 12 U n 1 13 C n 1 14 A n 1 15 C n 1 16 C n 1 17 C n 1 18 C n 1 19 U n 1 20 C n 2 1 MET n 2 2 LYS n 2 3 GLU n 2 4 LEU n 2 5 VAL n 2 6 GLU n 2 7 ILE n 2 8 ALA n 2 9 VAL n 2 10 PRO n 2 11 GLU n 2 12 ASN n 2 13 LEU n 2 14 VAL n 2 15 GLY n 2 16 ALA n 2 17 ILE n 2 18 LEU n 2 19 GLY n 2 20 LYS n 2 21 GLY n 2 22 GLY n 2 23 LYS n 2 24 THR n 2 25 LEU n 2 26 VAL n 2 27 GLU n 2 28 TYR n 2 29 GLN n 2 30 GLU n 2 31 LEU n 2 32 THR n 2 33 GLY n 2 34 ALA n 2 35 ARG n 2 36 ILE n 2 37 GLN n 2 38 ILE n 2 39 SER n 2 40 LYS n 2 41 LYS n 2 42 GLY n 2 43 GLU n 2 44 PHE n 2 45 LEU n 2 46 PRO n 2 47 GLY n 2 48 THR n 2 49 ARG n 2 50 ASN n 2 51 ARG n 2 52 ARG n 2 53 VAL n 2 54 THR n 2 55 ILE n 2 56 THR n 2 57 GLY n 2 58 SER n 2 59 PRO n 2 60 ALA n 2 61 ALA n 2 62 THR n 2 63 GLN n 2 64 ALA n 2 65 ALA n 2 66 GLN n 2 67 TYR n 2 68 LEU n 2 69 ILE n 2 70 SER n 2 71 GLN n 2 72 ARG n 2 73 VAL n 2 74 THR n 2 75 TYR n 2 76 GLU n 2 77 GLN n 2 78 GLY n 2 79 VAL n 2 80 ARG n 2 81 ALA n 2 82 SER n 2 83 ASN n 2 84 PRO n 2 85 GLN n 2 86 LYS n 2 87 VAL n # _entity_src_gen.entity_id 2 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'Product of SELEX protein binding study' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 1 1 G G C . n A 1 2 A 2 2 2 A A C . n A 1 3 G 3 3 3 G G C . n A 1 4 G 4 4 4 G G C . n A 1 5 A 5 5 5 A A C . n A 1 6 C 6 6 6 C C C . n A 1 7 C 7 7 7 C C C . n A 1 8 U 8 8 8 U U C . n A 1 9 A 9 9 9 A A C . n A 1 10 G 10 10 10 G G C . n A 1 11 A 11 11 11 A A C . n A 1 12 U 12 12 12 U U C . n A 1 13 C 13 13 13 C C C . n A 1 14 A 14 14 14 A A C . n A 1 15 C 15 15 15 C C C . n A 1 16 C 16 16 16 C C C . n A 1 17 C 17 17 17 C C C . n A 1 18 C 18 18 18 C C C . n A 1 19 U 19 19 19 U U C . n A 1 20 C 20 20 20 C C C . n B 1 1 G 1 1 1 G G D . n B 1 2 A 2 2 2 A A D . n B 1 3 G 3 3 3 G G D . n B 1 4 G 4 4 4 G G D . n B 1 5 A 5 5 5 A A D . n B 1 6 C 6 6 6 C C D . n B 1 7 C 7 7 7 C C D . n B 1 8 U 8 8 8 U U D . n B 1 9 A 9 9 9 A A D . n B 1 10 G 10 10 10 G G D . n B 1 11 A 11 11 11 A A D . n B 1 12 U 12 12 12 U U D . n B 1 13 C 13 13 13 C C D . n B 1 14 A 14 14 14 A A D . n B 1 15 C 15 15 15 C C D . n B 1 16 C 16 16 16 C C D . n B 1 17 C 17 17 17 C C D . n B 1 18 C 18 18 18 C C D . n B 1 19 U 19 19 19 U U D . n B 1 20 C 20 20 20 C C D . n C 2 1 MET 1 4 4 MET MET A . n C 2 2 LYS 2 5 5 LYS LYS A . n C 2 3 GLU 3 6 6 GLU GLU A . n C 2 4 LEU 4 7 7 LEU LEU A . n C 2 5 VAL 5 8 8 VAL VAL A . n C 2 6 GLU 6 9 9 GLU GLU A . n C 2 7 ILE 7 10 10 ILE ILE A . n C 2 8 ALA 8 11 11 ALA ALA A . n C 2 9 VAL 9 12 12 VAL VAL A . n C 2 10 PRO 10 13 13 PRO PRO A . n C 2 11 GLU 11 14 14 GLU GLU A . n C 2 12 ASN 12 15 15 ASN ASN A . n C 2 13 LEU 13 16 16 LEU LEU A . n C 2 14 VAL 14 17 17 VAL VAL A . n C 2 15 GLY 15 18 18 GLY GLY A . n C 2 16 ALA 16 19 19 ALA ALA A . n C 2 17 ILE 17 20 20 ILE ILE A . n C 2 18 LEU 18 21 21 LEU LEU A . n C 2 19 GLY 19 22 22 GLY GLY A . n C 2 20 LYS 20 23 23 LYS LYS A . n C 2 21 GLY 21 24 24 GLY GLY A . n C 2 22 GLY 22 25 25 GLY GLY A . n C 2 23 LYS 23 26 26 LYS LYS A . n C 2 24 THR 24 27 27 THR THR A . n C 2 25 LEU 25 28 28 LEU LEU A . n C 2 26 VAL 26 29 29 VAL VAL A . n C 2 27 GLU 27 30 30 GLU GLU A . n C 2 28 TYR 28 31 31 TYR TYR A . n C 2 29 GLN 29 32 32 GLN GLN A . n C 2 30 GLU 30 33 33 GLU GLU A . n C 2 31 LEU 31 34 34 LEU LEU A . n C 2 32 THR 32 35 35 THR THR A . n C 2 33 GLY 33 36 36 GLY GLY A . n C 2 34 ALA 34 37 37 ALA ALA A . n C 2 35 ARG 35 38 38 ARG ARG A . n C 2 36 ILE 36 39 39 ILE ILE A . n C 2 37 GLN 37 40 40 GLN GLN A . n C 2 38 ILE 38 41 41 ILE ILE A . n C 2 39 SER 39 42 42 SER SER A . n C 2 40 LYS 40 43 43 LYS LYS A . n C 2 41 LYS 41 44 44 LYS LYS A . n C 2 42 GLY 42 45 45 GLY GLY A . n C 2 43 GLU 43 46 46 GLU GLU A . n C 2 44 PHE 44 47 47 PHE PHE A . n C 2 45 LEU 45 48 48 LEU LEU A . n C 2 46 PRO 46 49 49 PRO PRO A . n C 2 47 GLY 47 50 50 GLY GLY A . n C 2 48 THR 48 51 51 THR THR A . n C 2 49 ARG 49 52 52 ARG ARG A . n C 2 50 ASN 50 53 53 ASN ASN A . n C 2 51 ARG 51 54 54 ARG ARG A . n C 2 52 ARG 52 55 55 ARG ARG A . n C 2 53 VAL 53 56 56 VAL VAL A . n C 2 54 THR 54 57 57 THR THR A . n C 2 55 ILE 55 58 58 ILE ILE A . n C 2 56 THR 56 59 59 THR THR A . n C 2 57 GLY 57 60 60 GLY GLY A . n C 2 58 SER 58 61 61 SER SER A . n C 2 59 PRO 59 62 62 PRO PRO A . n C 2 60 ALA 60 63 63 ALA ALA A . n C 2 61 ALA 61 64 64 ALA ALA A . n C 2 62 THR 62 65 65 THR THR A . n C 2 63 GLN 63 66 66 GLN GLN A . n C 2 64 ALA 64 67 67 ALA ALA A . n C 2 65 ALA 65 68 68 ALA ALA A . n C 2 66 GLN 66 69 69 GLN GLN A . n C 2 67 TYR 67 70 70 TYR TYR A . n C 2 68 LEU 68 71 71 LEU LEU A . n C 2 69 ILE 69 72 72 ILE ILE A . n C 2 70 SER 70 73 73 SER SER A . n C 2 71 GLN 71 74 74 GLN GLN A . n C 2 72 ARG 72 75 75 ARG ARG A . n C 2 73 VAL 73 76 76 VAL VAL A . n C 2 74 THR 74 77 77 THR THR A . n C 2 75 TYR 75 78 78 TYR TYR A . n C 2 76 GLU 76 79 79 GLU GLU A . n C 2 77 GLN 77 80 80 GLN GLN A . n C 2 78 GLY 78 81 81 GLY GLY A . n C 2 79 VAL 79 82 82 VAL VAL A . n C 2 80 ARG 80 83 83 ARG ARG A . n C 2 81 ALA 81 84 84 ALA ALA A . n C 2 82 SER 82 85 85 SER SER A . n C 2 83 ASN 83 86 86 ASN ASN A . n C 2 84 PRO 84 87 87 PRO PRO A . n C 2 85 GLN 85 88 88 GLN GLN A . n C 2 86 LYS 86 89 89 LYS LYS A . n C 2 87 VAL 87 90 90 VAL VAL A . n D 2 1 MET 1 4 4 MET MET B . n D 2 2 LYS 2 5 5 LYS LYS B . n D 2 3 GLU 3 6 6 GLU GLU B . n D 2 4 LEU 4 7 7 LEU LEU B . n D 2 5 VAL 5 8 8 VAL VAL B . n D 2 6 GLU 6 9 9 GLU GLU B . n D 2 7 ILE 7 10 10 ILE ILE B . n D 2 8 ALA 8 11 11 ALA ALA B . n D 2 9 VAL 9 12 12 VAL VAL B . n D 2 10 PRO 10 13 13 PRO PRO B . n D 2 11 GLU 11 14 14 GLU GLU B . n D 2 12 ASN 12 15 15 ASN ASN B . n D 2 13 LEU 13 16 16 LEU LEU B . n D 2 14 VAL 14 17 17 VAL VAL B . n D 2 15 GLY 15 18 18 GLY GLY B . n D 2 16 ALA 16 19 19 ALA ALA B . n D 2 17 ILE 17 20 20 ILE ILE B . n D 2 18 LEU 18 21 21 LEU LEU B . n D 2 19 GLY 19 22 22 GLY GLY B . n D 2 20 LYS 20 23 23 LYS LYS B . n D 2 21 GLY 21 24 24 GLY GLY B . n D 2 22 GLY 22 25 25 GLY GLY B . n D 2 23 LYS 23 26 26 LYS LYS B . n D 2 24 THR 24 27 27 THR THR B . n D 2 25 LEU 25 28 28 LEU LEU B . n D 2 26 VAL 26 29 29 VAL VAL B . n D 2 27 GLU 27 30 30 GLU GLU B . n D 2 28 TYR 28 31 31 TYR TYR B . n D 2 29 GLN 29 32 32 GLN GLN B . n D 2 30 GLU 30 33 33 GLU GLU B . n D 2 31 LEU 31 34 34 LEU LEU B . n D 2 32 THR 32 35 35 THR THR B . n D 2 33 GLY 33 36 36 GLY GLY B . n D 2 34 ALA 34 37 37 ALA ALA B . n D 2 35 ARG 35 38 38 ARG ARG B . n D 2 36 ILE 36 39 39 ILE ILE B . n D 2 37 GLN 37 40 40 GLN GLN B . n D 2 38 ILE 38 41 41 ILE ILE B . n D 2 39 SER 39 42 42 SER SER B . n D 2 40 LYS 40 43 43 LYS LYS B . n D 2 41 LYS 41 44 44 LYS LYS B . n D 2 42 GLY 42 45 45 GLY GLY B . n D 2 43 GLU 43 46 46 GLU GLU B . n D 2 44 PHE 44 47 47 PHE PHE B . n D 2 45 LEU 45 48 48 LEU LEU B . n D 2 46 PRO 46 49 49 PRO PRO B . n D 2 47 GLY 47 50 50 GLY GLY B . n D 2 48 THR 48 51 51 THR THR B . n D 2 49 ARG 49 52 52 ARG ARG B . n D 2 50 ASN 50 53 53 ASN ASN B . n D 2 51 ARG 51 54 54 ARG ARG B . n D 2 52 ARG 52 55 55 ARG ARG B . n D 2 53 VAL 53 56 56 VAL VAL B . n D 2 54 THR 54 57 57 THR THR B . n D 2 55 ILE 55 58 58 ILE ILE B . n D 2 56 THR 56 59 59 THR THR B . n D 2 57 GLY 57 60 60 GLY GLY B . n D 2 58 SER 58 61 61 SER SER B . n D 2 59 PRO 59 62 62 PRO PRO B . n D 2 60 ALA 60 63 63 ALA ALA B . n D 2 61 ALA 61 64 64 ALA ALA B . n D 2 62 THR 62 65 65 THR THR B . n D 2 63 GLN 63 66 66 GLN GLN B . n D 2 64 ALA 64 67 67 ALA ALA B . n D 2 65 ALA 65 68 68 ALA ALA B . n D 2 66 GLN 66 69 69 GLN GLN B . n D 2 67 TYR 67 70 70 TYR TYR B . n D 2 68 LEU 68 71 71 LEU LEU B . n D 2 69 ILE 69 72 72 ILE ILE B . n D 2 70 SER 70 73 73 SER SER B . n D 2 71 GLN 71 74 74 GLN GLN B . n D 2 72 ARG 72 75 75 ARG ARG B . n D 2 73 VAL 73 76 76 VAL VAL B . n D 2 74 THR 74 77 77 THR THR B . n D 2 75 TYR 75 78 78 TYR TYR B . n D 2 76 GLU 76 79 79 GLU GLU B . n D 2 77 GLN 77 80 80 GLN GLN B . n D 2 78 GLY 78 81 81 GLY GLY B . n D 2 79 VAL 79 82 82 VAL VAL B . n D 2 80 ARG 80 83 83 ARG ARG B . n D 2 81 ALA 81 84 84 ALA ALA B . n D 2 82 SER 82 85 85 SER SER B . n D 2 83 ASN 83 86 86 ASN ASN B . n D 2 84 PRO 84 87 87 PRO PRO B . n D 2 85 GLN 85 88 ? ? ? B . n D 2 86 LYS 86 89 ? ? ? B . n D 2 87 VAL 87 90 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 HOH 1 21 15 HOH HOH C . E 3 HOH 2 22 20 HOH HOH C . E 3 HOH 3 23 22 HOH HOH C . E 3 HOH 4 24 26 HOH HOH C . E 3 HOH 5 25 36 HOH HOH C . E 3 HOH 6 26 48 HOH HOH C . E 3 HOH 7 27 50 HOH HOH C . E 3 HOH 8 28 57 HOH HOH C . E 3 HOH 9 29 63 HOH HOH C . E 3 HOH 10 30 74 HOH HOH C . E 3 HOH 11 31 78 HOH HOH C . E 3 HOH 12 32 79 HOH HOH C . E 3 HOH 13 33 82 HOH HOH C . E 3 HOH 14 34 87 HOH HOH C . E 3 HOH 15 35 93 HOH HOH C . E 3 HOH 16 36 102 HOH HOH C . E 3 HOH 17 37 104 HOH HOH C . E 3 HOH 18 38 109 HOH HOH C . E 3 HOH 19 39 110 HOH HOH C . E 3 HOH 20 40 116 HOH HOH C . E 3 HOH 21 41 125 HOH HOH C . E 3 HOH 22 42 126 HOH HOH C . E 3 HOH 23 43 153 HOH HOH C . E 3 HOH 24 44 155 HOH HOH C . E 3 HOH 25 45 167 HOH HOH C . E 3 HOH 26 46 170 HOH HOH C . F 3 HOH 1 21 3 HOH HOH D . F 3 HOH 2 22 10 HOH HOH D . F 3 HOH 3 23 11 HOH HOH D . F 3 HOH 4 24 18 HOH HOH D . F 3 HOH 5 25 23 HOH HOH D . F 3 HOH 6 26 29 HOH HOH D . F 3 HOH 7 27 39 HOH HOH D . F 3 HOH 8 28 41 HOH HOH D . F 3 HOH 9 29 55 HOH HOH D . F 3 HOH 10 30 58 HOH HOH D . F 3 HOH 11 31 72 HOH HOH D . F 3 HOH 12 32 76 HOH HOH D . F 3 HOH 13 33 83 HOH HOH D . F 3 HOH 14 34 88 HOH HOH D . F 3 HOH 15 35 90 HOH HOH D . F 3 HOH 16 36 96 HOH HOH D . F 3 HOH 17 37 99 HOH HOH D . F 3 HOH 18 38 101 HOH HOH D . F 3 HOH 19 39 129 HOH HOH D . F 3 HOH 20 40 135 HOH HOH D . F 3 HOH 21 41 139 HOH HOH D . F 3 HOH 22 42 141 HOH HOH D . F 3 HOH 23 43 146 HOH HOH D . F 3 HOH 24 44 147 HOH HOH D . F 3 HOH 25 45 149 HOH HOH D . F 3 HOH 26 46 152 HOH HOH D . F 3 HOH 27 47 156 HOH HOH D . F 3 HOH 28 48 163 HOH HOH D . F 3 HOH 29 49 166 HOH HOH D . G 3 HOH 1 91 1 HOH HOH A . G 3 HOH 2 92 5 HOH HOH A . G 3 HOH 3 93 6 HOH HOH A . G 3 HOH 4 94 7 HOH HOH A . G 3 HOH 5 95 9 HOH HOH A . G 3 HOH 6 96 16 HOH HOH A . G 3 HOH 7 97 24 HOH HOH A . G 3 HOH 8 98 32 HOH HOH A . G 3 HOH 9 99 33 HOH HOH A . G 3 HOH 10 100 35 HOH HOH A . G 3 HOH 11 101 44 HOH HOH A . G 3 HOH 12 102 45 HOH HOH A . G 3 HOH 13 103 51 HOH HOH A . G 3 HOH 14 104 52 HOH HOH A . G 3 HOH 15 105 53 HOH HOH A . G 3 HOH 16 106 61 HOH HOH A . G 3 HOH 17 107 64 HOH HOH A . G 3 HOH 18 108 65 HOH HOH A . G 3 HOH 19 109 66 HOH HOH A . G 3 HOH 20 110 68 HOH HOH A . G 3 HOH 21 111 73 HOH HOH A . G 3 HOH 22 112 75 HOH HOH A . G 3 HOH 23 113 77 HOH HOH A . G 3 HOH 24 114 81 HOH HOH A . G 3 HOH 25 115 92 HOH HOH A . G 3 HOH 26 116 94 HOH HOH A . G 3 HOH 27 117 95 HOH HOH A . G 3 HOH 28 118 97 HOH HOH A . G 3 HOH 29 119 98 HOH HOH A . G 3 HOH 30 120 103 HOH HOH A . G 3 HOH 31 121 107 HOH HOH A . G 3 HOH 32 122 108 HOH HOH A . G 3 HOH 33 123 117 HOH HOH A . G 3 HOH 34 124 118 HOH HOH A . G 3 HOH 35 125 121 HOH HOH A . G 3 HOH 36 126 122 HOH HOH A . G 3 HOH 37 127 124 HOH HOH A . G 3 HOH 38 128 127 HOH HOH A . G 3 HOH 39 129 131 HOH HOH A . G 3 HOH 40 130 132 HOH HOH A . G 3 HOH 41 131 134 HOH HOH A . G 3 HOH 42 132 136 HOH HOH A . G 3 HOH 43 133 140 HOH HOH A . G 3 HOH 44 134 142 HOH HOH A . G 3 HOH 45 135 143 HOH HOH A . G 3 HOH 46 136 144 HOH HOH A . G 3 HOH 47 137 145 HOH HOH A . G 3 HOH 48 138 148 HOH HOH A . G 3 HOH 49 139 150 HOH HOH A . G 3 HOH 50 140 151 HOH HOH A . G 3 HOH 51 141 154 HOH HOH A . G 3 HOH 52 142 157 HOH HOH A . G 3 HOH 53 143 161 HOH HOH A . G 3 HOH 54 144 162 HOH HOH A . G 3 HOH 55 145 168 HOH HOH A . H 3 HOH 1 91 2 HOH HOH B . H 3 HOH 2 92 4 HOH HOH B . H 3 HOH 3 93 8 HOH HOH B . H 3 HOH 4 94 12 HOH HOH B . H 3 HOH 5 95 13 HOH HOH B . H 3 HOH 6 96 14 HOH HOH B . H 3 HOH 7 97 17 HOH HOH B . H 3 HOH 8 98 19 HOH HOH B . H 3 HOH 9 99 21 HOH HOH B . H 3 HOH 10 100 25 HOH HOH B . H 3 HOH 11 101 27 HOH HOH B . H 3 HOH 12 102 28 HOH HOH B . H 3 HOH 13 103 30 HOH HOH B . H 3 HOH 14 104 31 HOH HOH B . H 3 HOH 15 105 34 HOH HOH B . H 3 HOH 16 106 37 HOH HOH B . H 3 HOH 17 107 38 HOH HOH B . H 3 HOH 18 108 40 HOH HOH B . H 3 HOH 19 109 42 HOH HOH B . H 3 HOH 20 110 43 HOH HOH B . H 3 HOH 21 111 46 HOH HOH B . H 3 HOH 22 112 47 HOH HOH B . H 3 HOH 23 113 49 HOH HOH B . H 3 HOH 24 114 54 HOH HOH B . H 3 HOH 25 115 56 HOH HOH B . H 3 HOH 26 116 59 HOH HOH B . H 3 HOH 27 117 60 HOH HOH B . H 3 HOH 28 118 62 HOH HOH B . H 3 HOH 29 119 67 HOH HOH B . H 3 HOH 30 120 69 HOH HOH B . H 3 HOH 31 121 70 HOH HOH B . H 3 HOH 32 122 71 HOH HOH B . H 3 HOH 33 123 80 HOH HOH B . H 3 HOH 34 124 84 HOH HOH B . H 3 HOH 35 125 85 HOH HOH B . H 3 HOH 36 126 86 HOH HOH B . H 3 HOH 37 127 89 HOH HOH B . H 3 HOH 38 128 91 HOH HOH B . H 3 HOH 39 129 100 HOH HOH B . H 3 HOH 40 130 105 HOH HOH B . H 3 HOH 41 131 106 HOH HOH B . H 3 HOH 42 132 111 HOH HOH B . H 3 HOH 43 133 112 HOH HOH B . H 3 HOH 44 134 113 HOH HOH B . H 3 HOH 45 135 114 HOH HOH B . H 3 HOH 46 136 115 HOH HOH B . H 3 HOH 47 137 119 HOH HOH B . H 3 HOH 48 138 120 HOH HOH B . H 3 HOH 49 139 123 HOH HOH B . H 3 HOH 50 140 128 HOH HOH B . H 3 HOH 51 141 130 HOH HOH B . H 3 HOH 52 142 133 HOH HOH B . H 3 HOH 53 143 137 HOH HOH B . H 3 HOH 54 144 138 HOH HOH B . H 3 HOH 55 145 158 HOH HOH B . H 3 HOH 56 146 159 HOH HOH B . H 3 HOH 57 147 160 HOH HOH B . H 3 HOH 58 148 164 HOH HOH B . H 3 HOH 59 149 165 HOH HOH B . H 3 HOH 60 150 169 HOH HOH B . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 B MET 4 ? CG ? D MET 1 CG 2 1 Y 1 B MET 4 ? SD ? D MET 1 SD 3 1 Y 1 B MET 4 ? CE ? D MET 1 CE 4 1 Y 1 B LYS 5 ? CG ? D LYS 2 CG 5 1 Y 1 B LYS 5 ? CD ? D LYS 2 CD 6 1 Y 1 B LYS 5 ? CE ? D LYS 2 CE 7 1 Y 1 B LYS 5 ? NZ ? D LYS 2 NZ 8 1 Y 1 B GLU 6 ? CG ? D GLU 3 CG 9 1 Y 1 B GLU 6 ? CD ? D GLU 3 CD 10 1 Y 1 B GLU 6 ? OE1 ? D GLU 3 OE1 11 1 Y 1 B GLU 6 ? OE2 ? D GLU 3 OE2 12 1 Y 1 B ASN 86 ? CG ? D ASN 83 CG 13 1 Y 1 B ASN 86 ? OD1 ? D ASN 83 OD1 14 1 Y 1 B ASN 86 ? ND2 ? D ASN 83 ND2 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement . ? 1 DENZO 'data reduction' . ? 2 CCP4 'data scaling' '(TRUNCATE)' ? 3 CNS phasing . ? 4 # _cell.entry_id 1EC6 _cell.length_a 47.850 _cell.length_b 51.210 _cell.length_c 128.600 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1EC6 _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting orthorhombic _symmetry.Int_Tables_number 19 # _exptl.entry_id 1EC6 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.50 _exptl_crystal.density_percent_sol 50.71 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.temp 293.0 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details '25% PEG 5000, 150 mM ammonium sulfate, 100 mM MES, pH 6.5, VAPOR DIFFUSION, temperature 293.0K' _exptl_crystal_grow.pdbx_pH_range ? # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 MES ? ? ? 1 2 1 '(NH4)2SO4' ? ? ? 1 3 1 'PEG 5000' ? ? ? 1 4 2 '(NH4)2SO4' ? ? ? 1 5 2 'PEG 5000' ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type OTHER _diffrn_detector.pdbx_collection_date 1998-09-01 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.935 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'CHESS BEAMLINE A1' _diffrn_source.pdbx_synchrotron_site CHESS _diffrn_source.pdbx_synchrotron_beamline A1 _diffrn_source.pdbx_wavelength 0.935 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1EC6 _reflns.observed_criterion_sigma_I 3.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 20.0 _reflns.d_resolution_high 2.4 _reflns.number_obs 12004 _reflns.number_all 12459 _reflns.percent_possible_obs 96.5 _reflns.pdbx_Rmerge_I_obs 0.0810000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 16.9 _reflns.B_iso_Wilson_estimate 46.4 _reflns.pdbx_redundancy 5.3 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.40 _reflns_shell.d_res_low ? _reflns_shell.percent_possible_all 93.7 _reflns_shell.Rmerge_I_obs 0.2150000 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy 3.7 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1EC6 _refine.ls_number_reflns_obs 12459 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I 3.0 _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_d_res_low 20.0 _refine.ls_d_res_high 2.40 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.2150000 _refine.ls_R_factor_all 0.2240000 _refine.ls_R_factor_R_work 0.2080000 _refine.ls_R_factor_R_free 0.2910000 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10 _refine.ls_number_reflns_R_free 1245 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details random _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1286 _refine_hist.pdbx_number_atoms_nucleic_acid 838 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 170 _refine_hist.number_atoms_total 2294 _refine_hist.d_res_high 2.40 _refine_hist.d_res_low 20.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_angle_deg 1.48 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d 0.0091 ? ? ? 'X-RAY DIFFRACTION' ? # _database_PDB_matrix.entry_id 1EC6 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1EC6 _struct.title 'CRYSTAL STRUCTURE OF NOVA-2 KH3 K-HOMOLOGY RNA-BINDING DOMAIN BOUND TO 20-MER RNA HAIRPIN' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1EC6 _struct_keywords.pdbx_keywords 'RNA BINDING PROTEIN/RNA' _struct_keywords.text 'KH domain, alpha-beta fold, RNA-binding motif, protein/RNA structure, RNA BINDING PROTEIN-RNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 3 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform _struct_ref.pdbx_seq_one_letter_code 1 UNP NOVA2_HUMAN Q9UNW9 2 406 ? ? 2 PDB 1EC6 1EC6 1 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1EC6 A 1 ? 87 ? Q9UNW9 406 ? 491 ? 4 90 2 1 1EC6 B 1 ? 87 ? Q9UNW9 406 ? 491 ? 4 90 3 2 1EC6 C 1 ? 20 ? 1EC6 1 ? 20 ? 1 20 4 2 1EC6 D 1 ? 20 ? 1EC6 1 ? 20 ? 1 20 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1EC6 MET A 1 ? UNP Q9UNW9 ALA 377 'cloning artifact' 4 1 2 1EC6 MET B 1 ? UNP Q9UNW9 ALA 377 'cloning artifact' 4 2 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? dimeric 2 2 author_defined_assembly ? dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 B,C,F,G 2 1 A,D,E,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_biol.id 2 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLU C 11 ? GLY C 19 ? GLU A 14 GLY A 22 1 ? 9 HELX_P HELX_P2 2 GLY C 22 ? GLY C 33 ? GLY A 25 GLY A 36 1 ? 12 HELX_P HELX_P3 3 SER C 58 ? ASN C 83 ? SER A 61 ASN A 86 1 ? 26 HELX_P HELX_P4 4 GLU D 11 ? GLY D 19 ? GLU B 14 GLY B 22 1 ? 9 HELX_P HELX_P5 5 GLY D 22 ? GLY D 33 ? GLY B 25 GLY B 36 1 ? 12 HELX_P HELX_P6 6 SER D 58 ? SER D 82 ? SER B 61 SER B 85 1 ? 25 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A G 1 N1 ? ? ? 1_555 A C 20 N3 ? ? C G 1 C C 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A G 1 N2 ? ? ? 1_555 A C 20 O2 ? ? C G 1 C C 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A G 1 O6 ? ? ? 1_555 A C 20 N4 ? ? C G 1 C C 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A A 2 N1 ? ? ? 1_555 A U 19 N3 ? ? C A 2 C U 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A A 2 N6 ? ? ? 1_555 A U 19 O4 ? ? C A 2 C U 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A G 3 N1 ? ? ? 1_555 A C 18 N3 ? ? C G 3 C C 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A G 3 N2 ? ? ? 1_555 A C 18 O2 ? ? C G 3 C C 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A G 3 O6 ? ? ? 1_555 A C 18 N4 ? ? C G 3 C C 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A G 4 N1 ? ? ? 1_555 A C 17 N3 ? ? C G 4 C C 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A G 4 N2 ? ? ? 1_555 A C 17 O2 ? ? C G 4 C C 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A G 4 O6 ? ? ? 1_555 A C 17 N4 ? ? C G 4 C C 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A A 5 N1 ? ? ? 1_555 A C 16 N4 ? ? C A 5 C C 16 1_555 ? ? ? ? ? ? 'A-C MISPAIR' ? ? ? hydrog13 hydrog ? ? A C 7 O2 ? ? ? 1_555 A G 10 N1 ? ? C C 7 C G 10 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog14 hydrog ? ? B G 1 N1 ? ? ? 1_555 B C 20 N3 ? ? D G 1 D C 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B G 1 N2 ? ? ? 1_555 B C 20 O2 ? ? D G 1 D C 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B G 1 O6 ? ? ? 1_555 B C 20 N4 ? ? D G 1 D C 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B A 2 N1 ? ? ? 1_555 B U 19 N3 ? ? D A 2 D U 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B A 2 N6 ? ? ? 1_555 B U 19 O4 ? ? D A 2 D U 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B G 3 N1 ? ? ? 1_555 B C 18 N3 ? ? D G 3 D C 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B G 3 N2 ? ? ? 1_555 B C 18 O2 ? ? D G 3 D C 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B G 3 O6 ? ? ? 1_555 B C 18 N4 ? ? D G 3 D C 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B G 4 N1 ? ? ? 1_555 B C 17 N3 ? ? D G 4 D C 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B G 4 N2 ? ? ? 1_555 B C 17 O2 ? ? D G 4 D C 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? B G 4 O6 ? ? ? 1_555 B C 17 N4 ? ? D G 4 D C 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? B A 5 N1 ? ? ? 1_555 B C 16 N4 ? ? D A 5 D C 16 1_555 ? ? ? ? ? ? 'A-C MISPAIR' ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU C 4 ? PRO C 10 ? LEU A 7 PRO A 13 A 2 ASN C 50 ? THR C 56 ? ASN A 53 THR A 59 A 3 ARG C 35 ? ILE C 38 ? ARG A 38 ILE A 41 B 1 LEU D 4 ? PRO D 10 ? LEU B 7 PRO B 13 B 2 ASN D 50 ? THR D 56 ? ASN B 53 THR B 59 B 3 ARG D 35 ? ILE D 38 ? ARG B 38 ILE B 41 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL C 9 ? N VAL A 12 O ARG C 51 ? O ARG A 54 A 2 3 O THR C 56 ? O THR A 59 N ARG C 35 ? N ARG A 38 B 1 2 N VAL D 9 ? N VAL B 12 O ARG D 51 ? O ARG B 54 B 2 3 O THR D 56 ? O THR B 59 N ARG D 35 ? N ARG B 38 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 N6 C A 11 ? ? O C HOH 38 ? ? 2.14 2 1 N7 D G 4 ? ? O D HOH 27 ? ? 2.16 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 C5 _pdbx_validate_rmsd_bond.auth_asym_id_1 C _pdbx_validate_rmsd_bond.auth_comp_id_1 A _pdbx_validate_rmsd_bond.auth_seq_id_1 11 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 C6 _pdbx_validate_rmsd_bond.auth_asym_id_2 C _pdbx_validate_rmsd_bond.auth_comp_id_2 A _pdbx_validate_rmsd_bond.auth_seq_id_2 11 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.465 _pdbx_validate_rmsd_bond.bond_target_value 1.406 _pdbx_validate_rmsd_bond.bond_deviation 0.059 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.009 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 N9 C G 10 ? ? "C1'" C G 10 ? ? "C2'" C G 10 ? ? 124.03 114.00 10.03 1.30 N 2 1 C4 C A 11 ? ? C5 C A 11 ? ? C6 C A 11 ? ? 113.91 117.00 -3.09 0.50 N 3 1 C6 C A 11 ? ? C5 C A 11 ? ? N7 C A 11 ? ? 137.17 132.30 4.87 0.70 N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id SER _pdbx_validate_torsion.auth_asym_id B _pdbx_validate_torsion.auth_seq_id 85 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -84.92 _pdbx_validate_torsion.psi 32.35 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 A C 11 ? ? 0.107 'SIDE CHAIN' 2 1 A D 11 ? ? 0.061 'SIDE CHAIN' # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 B GLN 88 ? D GLN 85 2 1 Y 1 B LYS 89 ? D LYS 86 3 1 Y 1 B VAL 90 ? D VAL 87 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 C OP3 O N N 95 C P P N N 96 C OP1 O N N 97 C OP2 O N N 98 C "O5'" O N N 99 C "C5'" C N N 100 C "C4'" C N R 101 C "O4'" O N N 102 C "C3'" C N S 103 C "O3'" O N N 104 C "C2'" C N R 105 C "O2'" O N N 106 C "C1'" C N R 107 C N1 N N N 108 C C2 C N N 109 C O2 O N N 110 C N3 N N N 111 C C4 C N N 112 C N4 N N N 113 C C5 C N N 114 C C6 C N N 115 C HOP3 H N N 116 C HOP2 H N N 117 C "H5'" H N N 118 C "H5''" H N N 119 C "H4'" H N N 120 C "H3'" H N N 121 C "HO3'" H N N 122 C "H2'" H N N 123 C "HO2'" H N N 124 C "H1'" H N N 125 C H41 H N N 126 C H42 H N N 127 C H5 H N N 128 C H6 H N N 129 G OP3 O N N 130 G P P N N 131 G OP1 O N N 132 G OP2 O N N 133 G "O5'" O N N 134 G "C5'" C N N 135 G "C4'" C N R 136 G "O4'" O N N 137 G "C3'" C N S 138 G "O3'" O N N 139 G "C2'" C N R 140 G "O2'" O N N 141 G "C1'" C N R 142 G N9 N Y N 143 G C8 C Y N 144 G N7 N Y N 145 G C5 C Y N 146 G C6 C N N 147 G O6 O N N 148 G N1 N N N 149 G C2 C N N 150 G N2 N N N 151 G N3 N N N 152 G C4 C Y N 153 G HOP3 H N N 154 G HOP2 H N N 155 G "H5'" H N N 156 G "H5''" H N N 157 G "H4'" H N N 158 G "H3'" H N N 159 G "HO3'" H N N 160 G "H2'" H N N 161 G "HO2'" H N N 162 G "H1'" H N N 163 G H8 H N N 164 G H1 H N N 165 G H21 H N N 166 G H22 H N N 167 GLN N N N N 168 GLN CA C N S 169 GLN C C N N 170 GLN O O N N 171 GLN CB C N N 172 GLN CG C N N 173 GLN CD C N N 174 GLN OE1 O N N 175 GLN NE2 N N N 176 GLN OXT O N N 177 GLN H H N N 178 GLN H2 H N N 179 GLN HA H N N 180 GLN HB2 H N N 181 GLN HB3 H N N 182 GLN HG2 H N N 183 GLN HG3 H N N 184 GLN HE21 H N N 185 GLN HE22 H N N 186 GLN HXT H N N 187 GLU N N N N 188 GLU CA C N S 189 GLU C C N N 190 GLU O O N N 191 GLU CB C N N 192 GLU CG C N N 193 GLU CD C N N 194 GLU OE1 O N N 195 GLU OE2 O N N 196 GLU OXT O N N 197 GLU H H N N 198 GLU H2 H N N 199 GLU HA H N N 200 GLU HB2 H N N 201 GLU HB3 H N N 202 GLU HG2 H N N 203 GLU HG3 H N N 204 GLU HE2 H N N 205 GLU HXT H N N 206 GLY N N N N 207 GLY CA C N N 208 GLY C C N N 209 GLY O O N N 210 GLY OXT O N N 211 GLY H H N N 212 GLY H2 H N N 213 GLY HA2 H N N 214 GLY HA3 H N N 215 GLY HXT H N N 216 HOH O O N N 217 HOH H1 H N N 218 HOH H2 H N N 219 ILE N N N N 220 ILE CA C N S 221 ILE C C N N 222 ILE O O N N 223 ILE CB C N S 224 ILE CG1 C N N 225 ILE CG2 C N N 226 ILE CD1 C N N 227 ILE OXT O N N 228 ILE H H N N 229 ILE H2 H N N 230 ILE HA H N N 231 ILE HB H N N 232 ILE HG12 H N N 233 ILE HG13 H N N 234 ILE HG21 H N N 235 ILE HG22 H N N 236 ILE HG23 H N N 237 ILE HD11 H N N 238 ILE HD12 H N N 239 ILE HD13 H N N 240 ILE HXT H N N 241 LEU N N N N 242 LEU CA C N S 243 LEU C C N N 244 LEU O O N N 245 LEU CB C N N 246 LEU CG C N N 247 LEU CD1 C N N 248 LEU CD2 C N N 249 LEU OXT O N N 250 LEU H H N N 251 LEU H2 H N N 252 LEU HA H N N 253 LEU HB2 H N N 254 LEU HB3 H N N 255 LEU HG H N N 256 LEU HD11 H N N 257 LEU HD12 H N N 258 LEU HD13 H N N 259 LEU HD21 H N N 260 LEU HD22 H N N 261 LEU HD23 H N N 262 LEU HXT H N N 263 LYS N N N N 264 LYS CA C N S 265 LYS C C N N 266 LYS O O N N 267 LYS CB C N N 268 LYS CG C N N 269 LYS CD C N N 270 LYS CE C N N 271 LYS NZ N N N 272 LYS OXT O N N 273 LYS H H N N 274 LYS H2 H N N 275 LYS HA H N N 276 LYS HB2 H N N 277 LYS HB3 H N N 278 LYS HG2 H N N 279 LYS HG3 H N N 280 LYS HD2 H N N 281 LYS HD3 H N N 282 LYS HE2 H N N 283 LYS HE3 H N N 284 LYS HZ1 H N N 285 LYS HZ2 H N N 286 LYS HZ3 H N N 287 LYS HXT H N N 288 MET N N N N 289 MET CA C N S 290 MET C C N N 291 MET O O N N 292 MET CB C N N 293 MET CG C N N 294 MET SD S N N 295 MET CE C N N 296 MET OXT O N N 297 MET H H N N 298 MET H2 H N N 299 MET HA H N N 300 MET HB2 H N N 301 MET HB3 H N N 302 MET HG2 H N N 303 MET HG3 H N N 304 MET HE1 H N N 305 MET HE2 H N N 306 MET HE3 H N N 307 MET HXT H N N 308 PHE N N N N 309 PHE CA C N S 310 PHE C C N N 311 PHE O O N N 312 PHE CB C N N 313 PHE CG C Y N 314 PHE CD1 C Y N 315 PHE CD2 C Y N 316 PHE CE1 C Y N 317 PHE CE2 C Y N 318 PHE CZ C Y N 319 PHE OXT O N N 320 PHE H H N N 321 PHE H2 H N N 322 PHE HA H N N 323 PHE HB2 H N N 324 PHE HB3 H N N 325 PHE HD1 H N N 326 PHE HD2 H N N 327 PHE HE1 H N N 328 PHE HE2 H N N 329 PHE HZ H N N 330 PHE HXT H N N 331 PRO N N N N 332 PRO CA C N S 333 PRO C C N N 334 PRO O O N N 335 PRO CB C N N 336 PRO CG C N N 337 PRO CD C N N 338 PRO OXT O N N 339 PRO H H N N 340 PRO HA H N N 341 PRO HB2 H N N 342 PRO HB3 H N N 343 PRO HG2 H N N 344 PRO HG3 H N N 345 PRO HD2 H N N 346 PRO HD3 H N N 347 PRO HXT H N N 348 SER N N N N 349 SER CA C N S 350 SER C C N N 351 SER O O N N 352 SER CB C N N 353 SER OG O N N 354 SER OXT O N N 355 SER H H N N 356 SER H2 H N N 357 SER HA H N N 358 SER HB2 H N N 359 SER HB3 H N N 360 SER HG H N N 361 SER HXT H N N 362 THR N N N N 363 THR CA C N S 364 THR C C N N 365 THR O O N N 366 THR CB C N R 367 THR OG1 O N N 368 THR CG2 C N N 369 THR OXT O N N 370 THR H H N N 371 THR H2 H N N 372 THR HA H N N 373 THR HB H N N 374 THR HG1 H N N 375 THR HG21 H N N 376 THR HG22 H N N 377 THR HG23 H N N 378 THR HXT H N N 379 TYR N N N N 380 TYR CA C N S 381 TYR C C N N 382 TYR O O N N 383 TYR CB C N N 384 TYR CG C Y N 385 TYR CD1 C Y N 386 TYR CD2 C Y N 387 TYR CE1 C Y N 388 TYR CE2 C Y N 389 TYR CZ C Y N 390 TYR OH O N N 391 TYR OXT O N N 392 TYR H H N N 393 TYR H2 H N N 394 TYR HA H N N 395 TYR HB2 H N N 396 TYR HB3 H N N 397 TYR HD1 H N N 398 TYR HD2 H N N 399 TYR HE1 H N N 400 TYR HE2 H N N 401 TYR HH H N N 402 TYR HXT H N N 403 U OP3 O N N 404 U P P N N 405 U OP1 O N N 406 U OP2 O N N 407 U "O5'" O N N 408 U "C5'" C N N 409 U "C4'" C N R 410 U "O4'" O N N 411 U "C3'" C N S 412 U "O3'" O N N 413 U "C2'" C N R 414 U "O2'" O N N 415 U "C1'" C N R 416 U N1 N N N 417 U C2 C N N 418 U O2 O N N 419 U N3 N N N 420 U C4 C N N 421 U O4 O N N 422 U C5 C N N 423 U C6 C N N 424 U HOP3 H N N 425 U HOP2 H N N 426 U "H5'" H N N 427 U "H5''" H N N 428 U "H4'" H N N 429 U "H3'" H N N 430 U "HO3'" H N N 431 U "H2'" H N N 432 U "HO2'" H N N 433 U "H1'" H N N 434 U H3 H N N 435 U H5 H N N 436 U H6 H N N 437 VAL N N N N 438 VAL CA C N S 439 VAL C C N N 440 VAL O O N N 441 VAL CB C N N 442 VAL CG1 C N N 443 VAL CG2 C N N 444 VAL OXT O N N 445 VAL H H N N 446 VAL H2 H N N 447 VAL HA H N N 448 VAL HB H N N 449 VAL HG11 H N N 450 VAL HG12 H N N 451 VAL HG13 H N N 452 VAL HG21 H N N 453 VAL HG22 H N N 454 VAL HG23 H N N 455 VAL HXT H N N 456 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 ALA N CA sing N N 40 ALA N H sing N N 41 ALA N H2 sing N N 42 ALA CA C sing N N 43 ALA CA CB sing N N 44 ALA CA HA sing N N 45 ALA C O doub N N 46 ALA C OXT sing N N 47 ALA CB HB1 sing N N 48 ALA CB HB2 sing N N 49 ALA CB HB3 sing N N 50 ALA OXT HXT sing N N 51 ARG N CA sing N N 52 ARG N H sing N N 53 ARG N H2 sing N N 54 ARG CA C sing N N 55 ARG CA CB sing N N 56 ARG CA HA sing N N 57 ARG C O doub N N 58 ARG C OXT sing N N 59 ARG CB CG sing N N 60 ARG CB HB2 sing N N 61 ARG CB HB3 sing N N 62 ARG CG CD sing N N 63 ARG CG HG2 sing N N 64 ARG CG HG3 sing N N 65 ARG CD NE sing N N 66 ARG CD HD2 sing N N 67 ARG CD HD3 sing N N 68 ARG NE CZ sing N N 69 ARG NE HE sing N N 70 ARG CZ NH1 sing N N 71 ARG CZ NH2 doub N N 72 ARG NH1 HH11 sing N N 73 ARG NH1 HH12 sing N N 74 ARG NH2 HH21 sing N N 75 ARG NH2 HH22 sing N N 76 ARG OXT HXT sing N N 77 ASN N CA sing N N 78 ASN N H sing N N 79 ASN N H2 sing N N 80 ASN CA C sing N N 81 ASN CA CB sing N N 82 ASN CA HA sing N N 83 ASN C O doub N N 84 ASN C OXT sing N N 85 ASN CB CG sing N N 86 ASN CB HB2 sing N N 87 ASN CB HB3 sing N N 88 ASN CG OD1 doub N N 89 ASN CG ND2 sing N N 90 ASN ND2 HD21 sing N N 91 ASN ND2 HD22 sing N N 92 ASN OXT HXT sing N N 93 C OP3 P sing N N 94 C OP3 HOP3 sing N N 95 C P OP1 doub N N 96 C P OP2 sing N N 97 C P "O5'" sing N N 98 C OP2 HOP2 sing N N 99 C "O5'" "C5'" sing N N 100 C "C5'" "C4'" sing N N 101 C "C5'" "H5'" sing N N 102 C "C5'" "H5''" sing N N 103 C "C4'" "O4'" sing N N 104 C "C4'" "C3'" sing N N 105 C "C4'" "H4'" sing N N 106 C "O4'" "C1'" sing N N 107 C "C3'" "O3'" sing N N 108 C "C3'" "C2'" sing N N 109 C "C3'" "H3'" sing N N 110 C "O3'" "HO3'" sing N N 111 C "C2'" "O2'" sing N N 112 C "C2'" "C1'" sing N N 113 C "C2'" "H2'" sing N N 114 C "O2'" "HO2'" sing N N 115 C "C1'" N1 sing N N 116 C "C1'" "H1'" sing N N 117 C N1 C2 sing N N 118 C N1 C6 sing N N 119 C C2 O2 doub N N 120 C C2 N3 sing N N 121 C N3 C4 doub N N 122 C C4 N4 sing N N 123 C C4 C5 sing N N 124 C N4 H41 sing N N 125 C N4 H42 sing N N 126 C C5 C6 doub N N 127 C C5 H5 sing N N 128 C C6 H6 sing N N 129 G OP3 P sing N N 130 G OP3 HOP3 sing N N 131 G P OP1 doub N N 132 G P OP2 sing N N 133 G P "O5'" sing N N 134 G OP2 HOP2 sing N N 135 G "O5'" "C5'" sing N N 136 G "C5'" "C4'" sing N N 137 G "C5'" "H5'" sing N N 138 G "C5'" "H5''" sing N N 139 G "C4'" "O4'" sing N N 140 G "C4'" "C3'" sing N N 141 G "C4'" "H4'" sing N N 142 G "O4'" "C1'" sing N N 143 G "C3'" "O3'" sing N N 144 G "C3'" "C2'" sing N N 145 G "C3'" "H3'" sing N N 146 G "O3'" "HO3'" sing N N 147 G "C2'" "O2'" sing N N 148 G "C2'" "C1'" sing N N 149 G "C2'" "H2'" sing N N 150 G "O2'" "HO2'" sing N N 151 G "C1'" N9 sing N N 152 G "C1'" "H1'" sing N N 153 G N9 C8 sing Y N 154 G N9 C4 sing Y N 155 G C8 N7 doub Y N 156 G C8 H8 sing N N 157 G N7 C5 sing Y N 158 G C5 C6 sing N N 159 G C5 C4 doub Y N 160 G C6 O6 doub N N 161 G C6 N1 sing N N 162 G N1 C2 sing N N 163 G N1 H1 sing N N 164 G C2 N2 sing N N 165 G C2 N3 doub N N 166 G N2 H21 sing N N 167 G N2 H22 sing N N 168 G N3 C4 sing N N 169 GLN N CA sing N N 170 GLN N H sing N N 171 GLN N H2 sing N N 172 GLN CA C sing N N 173 GLN CA CB sing N N 174 GLN CA HA sing N N 175 GLN C O doub N N 176 GLN C OXT sing N N 177 GLN CB CG sing N N 178 GLN CB HB2 sing N N 179 GLN CB HB3 sing N N 180 GLN CG CD sing N N 181 GLN CG HG2 sing N N 182 GLN CG HG3 sing N N 183 GLN CD OE1 doub N N 184 GLN CD NE2 sing N N 185 GLN NE2 HE21 sing N N 186 GLN NE2 HE22 sing N N 187 GLN OXT HXT sing N N 188 GLU N CA sing N N 189 GLU N H sing N N 190 GLU N H2 sing N N 191 GLU CA C sing N N 192 GLU CA CB sing N N 193 GLU CA HA sing N N 194 GLU C O doub N N 195 GLU C OXT sing N N 196 GLU CB CG sing N N 197 GLU CB HB2 sing N N 198 GLU CB HB3 sing N N 199 GLU CG CD sing N N 200 GLU CG HG2 sing N N 201 GLU CG HG3 sing N N 202 GLU CD OE1 doub N N 203 GLU CD OE2 sing N N 204 GLU OE2 HE2 sing N N 205 GLU OXT HXT sing N N 206 GLY N CA sing N N 207 GLY N H sing N N 208 GLY N H2 sing N N 209 GLY CA C sing N N 210 GLY CA HA2 sing N N 211 GLY CA HA3 sing N N 212 GLY C O doub N N 213 GLY C OXT sing N N 214 GLY OXT HXT sing N N 215 HOH O H1 sing N N 216 HOH O H2 sing N N 217 ILE N CA sing N N 218 ILE N H sing N N 219 ILE N H2 sing N N 220 ILE CA C sing N N 221 ILE CA CB sing N N 222 ILE CA HA sing N N 223 ILE C O doub N N 224 ILE C OXT sing N N 225 ILE CB CG1 sing N N 226 ILE CB CG2 sing N N 227 ILE CB HB sing N N 228 ILE CG1 CD1 sing N N 229 ILE CG1 HG12 sing N N 230 ILE CG1 HG13 sing N N 231 ILE CG2 HG21 sing N N 232 ILE CG2 HG22 sing N N 233 ILE CG2 HG23 sing N N 234 ILE CD1 HD11 sing N N 235 ILE CD1 HD12 sing N N 236 ILE CD1 HD13 sing N N 237 ILE OXT HXT sing N N 238 LEU N CA sing N N 239 LEU N H sing N N 240 LEU N H2 sing N N 241 LEU CA C sing N N 242 LEU CA CB sing N N 243 LEU CA HA sing N N 244 LEU C O doub N N 245 LEU C OXT sing N N 246 LEU CB CG sing N N 247 LEU CB HB2 sing N N 248 LEU CB HB3 sing N N 249 LEU CG CD1 sing N N 250 LEU CG CD2 sing N N 251 LEU CG HG sing N N 252 LEU CD1 HD11 sing N N 253 LEU CD1 HD12 sing N N 254 LEU CD1 HD13 sing N N 255 LEU CD2 HD21 sing N N 256 LEU CD2 HD22 sing N N 257 LEU CD2 HD23 sing N N 258 LEU OXT HXT sing N N 259 LYS N CA sing N N 260 LYS N H sing N N 261 LYS N H2 sing N N 262 LYS CA C sing N N 263 LYS CA CB sing N N 264 LYS CA HA sing N N 265 LYS C O doub N N 266 LYS C OXT sing N N 267 LYS CB CG sing N N 268 LYS CB HB2 sing N N 269 LYS CB HB3 sing N N 270 LYS CG CD sing N N 271 LYS CG HG2 sing N N 272 LYS CG HG3 sing N N 273 LYS CD CE sing N N 274 LYS CD HD2 sing N N 275 LYS CD HD3 sing N N 276 LYS CE NZ sing N N 277 LYS CE HE2 sing N N 278 LYS CE HE3 sing N N 279 LYS NZ HZ1 sing N N 280 LYS NZ HZ2 sing N N 281 LYS NZ HZ3 sing N N 282 LYS OXT HXT sing N N 283 MET N CA sing N N 284 MET N H sing N N 285 MET N H2 sing N N 286 MET CA C sing N N 287 MET CA CB sing N N 288 MET CA HA sing N N 289 MET C O doub N N 290 MET C OXT sing N N 291 MET CB CG sing N N 292 MET CB HB2 sing N N 293 MET CB HB3 sing N N 294 MET CG SD sing N N 295 MET CG HG2 sing N N 296 MET CG HG3 sing N N 297 MET SD CE sing N N 298 MET CE HE1 sing N N 299 MET CE HE2 sing N N 300 MET CE HE3 sing N N 301 MET OXT HXT sing N N 302 PHE N CA sing N N 303 PHE N H sing N N 304 PHE N H2 sing N N 305 PHE CA C sing N N 306 PHE CA CB sing N N 307 PHE CA HA sing N N 308 PHE C O doub N N 309 PHE C OXT sing N N 310 PHE CB CG sing N N 311 PHE CB HB2 sing N N 312 PHE CB HB3 sing N N 313 PHE CG CD1 doub Y N 314 PHE CG CD2 sing Y N 315 PHE CD1 CE1 sing Y N 316 PHE CD1 HD1 sing N N 317 PHE CD2 CE2 doub Y N 318 PHE CD2 HD2 sing N N 319 PHE CE1 CZ doub Y N 320 PHE CE1 HE1 sing N N 321 PHE CE2 CZ sing Y N 322 PHE CE2 HE2 sing N N 323 PHE CZ HZ sing N N 324 PHE OXT HXT sing N N 325 PRO N CA sing N N 326 PRO N CD sing N N 327 PRO N H sing N N 328 PRO CA C sing N N 329 PRO CA CB sing N N 330 PRO CA HA sing N N 331 PRO C O doub N N 332 PRO C OXT sing N N 333 PRO CB CG sing N N 334 PRO CB HB2 sing N N 335 PRO CB HB3 sing N N 336 PRO CG CD sing N N 337 PRO CG HG2 sing N N 338 PRO CG HG3 sing N N 339 PRO CD HD2 sing N N 340 PRO CD HD3 sing N N 341 PRO OXT HXT sing N N 342 SER N CA sing N N 343 SER N H sing N N 344 SER N H2 sing N N 345 SER CA C sing N N 346 SER CA CB sing N N 347 SER CA HA sing N N 348 SER C O doub N N 349 SER C OXT sing N N 350 SER CB OG sing N N 351 SER CB HB2 sing N N 352 SER CB HB3 sing N N 353 SER OG HG sing N N 354 SER OXT HXT sing N N 355 THR N CA sing N N 356 THR N H sing N N 357 THR N H2 sing N N 358 THR CA C sing N N 359 THR CA CB sing N N 360 THR CA HA sing N N 361 THR C O doub N N 362 THR C OXT sing N N 363 THR CB OG1 sing N N 364 THR CB CG2 sing N N 365 THR CB HB sing N N 366 THR OG1 HG1 sing N N 367 THR CG2 HG21 sing N N 368 THR CG2 HG22 sing N N 369 THR CG2 HG23 sing N N 370 THR OXT HXT sing N N 371 TYR N CA sing N N 372 TYR N H sing N N 373 TYR N H2 sing N N 374 TYR CA C sing N N 375 TYR CA CB sing N N 376 TYR CA HA sing N N 377 TYR C O doub N N 378 TYR C OXT sing N N 379 TYR CB CG sing N N 380 TYR CB HB2 sing N N 381 TYR CB HB3 sing N N 382 TYR CG CD1 doub Y N 383 TYR CG CD2 sing Y N 384 TYR CD1 CE1 sing Y N 385 TYR CD1 HD1 sing N N 386 TYR CD2 CE2 doub Y N 387 TYR CD2 HD2 sing N N 388 TYR CE1 CZ doub Y N 389 TYR CE1 HE1 sing N N 390 TYR CE2 CZ sing Y N 391 TYR CE2 HE2 sing N N 392 TYR CZ OH sing N N 393 TYR OH HH sing N N 394 TYR OXT HXT sing N N 395 U OP3 P sing N N 396 U OP3 HOP3 sing N N 397 U P OP1 doub N N 398 U P OP2 sing N N 399 U P "O5'" sing N N 400 U OP2 HOP2 sing N N 401 U "O5'" "C5'" sing N N 402 U "C5'" "C4'" sing N N 403 U "C5'" "H5'" sing N N 404 U "C5'" "H5''" sing N N 405 U "C4'" "O4'" sing N N 406 U "C4'" "C3'" sing N N 407 U "C4'" "H4'" sing N N 408 U "O4'" "C1'" sing N N 409 U "C3'" "O3'" sing N N 410 U "C3'" "C2'" sing N N 411 U "C3'" "H3'" sing N N 412 U "O3'" "HO3'" sing N N 413 U "C2'" "O2'" sing N N 414 U "C2'" "C1'" sing N N 415 U "C2'" "H2'" sing N N 416 U "O2'" "HO2'" sing N N 417 U "C1'" N1 sing N N 418 U "C1'" "H1'" sing N N 419 U N1 C2 sing N N 420 U N1 C6 sing N N 421 U C2 O2 doub N N 422 U C2 N3 sing N N 423 U N3 C4 sing N N 424 U N3 H3 sing N N 425 U C4 O4 doub N N 426 U C4 C5 sing N N 427 U C5 C6 doub N N 428 U C5 H5 sing N N 429 U C6 H6 sing N N 430 VAL N CA sing N N 431 VAL N H sing N N 432 VAL N H2 sing N N 433 VAL CA C sing N N 434 VAL CA CB sing N N 435 VAL CA HA sing N N 436 VAL C O doub N N 437 VAL C OXT sing N N 438 VAL CB CG1 sing N N 439 VAL CB CG2 sing N N 440 VAL CB HB sing N N 441 VAL CG1 HG11 sing N N 442 VAL CG1 HG12 sing N N 443 VAL CG1 HG13 sing N N 444 VAL CG2 HG21 sing N N 445 VAL CG2 HG22 sing N N 446 VAL CG2 HG23 sing N N 447 VAL OXT HXT sing N N 448 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1EC6 'double helix' 1EC6 'a-form double helix' 1EC6 'hairpin loop' 1EC6 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 1 1_555 A C 20 1_555 -0.330 -0.267 0.134 -1.004 -8.987 -1.455 1 C_G1:C20_C C 1 ? C 20 ? 19 1 1 A A 2 1_555 A U 19 1_555 -0.079 -0.391 -0.225 -5.202 -14.642 -0.303 2 C_A2:U19_C C 2 ? C 19 ? 20 1 1 A G 3 1_555 A C 18 1_555 0.418 -0.177 0.108 -7.331 -18.025 1.328 3 C_G3:C18_C C 3 ? C 18 ? 19 1 1 A G 4 1_555 A C 17 1_555 -0.063 -0.228 0.070 -22.858 -22.787 1.999 4 C_G4:C17_C C 4 ? C 17 ? 19 1 1 A A 5 1_555 A C 16 1_555 2.210 1.084 -0.554 -36.440 -23.710 -5.462 5 C_A5:C16_C C 5 ? C 16 ? ? ? 1 A C 7 1_555 A G 10 1_555 -0.306 -5.301 0.832 -2.632 -9.656 110.706 6 C_C7:G10_C C 7 ? C 10 ? ? 2 1 B G 1 1_555 B C 20 1_555 -0.464 -0.105 0.208 0.314 4.011 0.715 7 D_G1:C20_D D 1 ? D 20 ? 19 1 1 B A 2 1_555 B U 19 1_555 -0.085 -0.217 -0.149 -0.908 -15.633 -0.280 8 D_A2:U19_D D 2 ? D 19 ? 20 1 1 B G 3 1_555 B C 18 1_555 -0.500 -0.037 0.416 -4.636 -19.440 2.252 9 D_G3:C18_D D 3 ? D 18 ? 19 1 1 B G 4 1_555 B C 17 1_555 0.020 -0.183 -0.214 -25.530 -27.554 0.207 10 D_G4:C17_D D 4 ? D 17 ? 19 1 1 B A 5 1_555 B C 16 1_555 2.444 1.006 0.002 -45.363 -20.036 -5.525 11 D_A5:C16_D D 5 ? D 16 ? ? ? # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 1 1_555 A C 20 1_555 A A 2 1_555 A U 19 1_555 -0.356 -1.381 3.348 2.164 9.955 33.789 -3.704 0.898 2.813 16.664 -3.622 35.249 1 CC_G1A2:U19C20_CC C 1 ? C 20 ? C 2 ? C 19 ? 1 A A 2 1_555 A U 19 1_555 A G 3 1_555 A C 18 1_555 0.300 -1.647 3.282 -0.958 6.531 33.853 -3.749 -0.648 2.913 11.085 1.626 34.472 2 CC_A2G3:C18U19_CC C 2 ? C 19 ? C 3 ? C 18 ? 1 A G 3 1_555 A C 18 1_555 A G 4 1_555 A C 17 1_555 0.398 -2.254 3.463 3.927 14.594 30.634 -5.979 -0.106 2.225 25.749 -6.929 34.079 3 CC_G3G4:C17C18_CC C 3 ? C 18 ? C 4 ? C 17 ? 1 A G 4 1_555 A C 17 1_555 A A 5 1_555 A C 16 1_555 -0.878 -1.040 3.571 5.733 4.381 44.155 -1.792 1.710 3.325 5.781 -7.567 44.711 4 CC_G4A5:C16C17_CC C 4 ? C 17 ? C 5 ? C 16 ? 1 B G 1 1_555 B C 20 1_555 B A 2 1_555 B U 19 1_555 -0.058 -1.233 3.247 1.965 12.428 34.237 -3.582 0.347 2.648 20.281 -3.207 36.411 5 DD_G1A2:U19C20_DD D 1 ? D 20 ? D 2 ? D 19 ? 1 B A 2 1_555 B U 19 1_555 B G 3 1_555 B C 18 1_555 0.410 -1.550 3.191 -1.656 7.527 32.901 -3.791 -0.953 2.756 13.067 2.875 33.768 6 DD_A2G3:C18U19_DD D 2 ? D 19 ? D 3 ? D 18 ? 1 B G 3 1_555 B C 18 1_555 B G 4 1_555 B C 17 1_555 0.762 -1.941 3.769 10.380 14.419 36.087 -4.614 0.171 2.921 21.731 -15.644 40.092 7 DD_G3G4:C17C18_DD D 3 ? D 18 ? D 4 ? D 17 ? 1 B G 4 1_555 B C 17 1_555 B A 5 1_555 B C 16 1_555 -0.219 -1.120 3.822 3.235 6.689 45.190 -2.105 0.603 3.607 8.636 -4.177 45.766 8 DD_G4A5:C16C17_DD D 4 ? D 17 ? D 5 ? D 16 ? # _atom_sites.entry_id 1EC6 _atom_sites.fract_transf_matrix[1][1] 0.020899 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019527 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007776 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_