HEADER TRANSFERASE 28-JAN-00 1EE0 TITLE 2-PYRONE SYNTHASE COMPLEXED WITH ACETOACETYL-COA COMPND MOL_ID: 1; COMPND 2 MOLECULE: 2-PYRONE SYNTHASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 2.3.1.74; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GERBERA HYBRID CULTIVAR; SOURCE 3 ORGANISM_TAXID: 18101; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_VECTOR: PHIS8 (MODIFIED PET VECTOR) KEYWDS POLYKETIDE SYNTHASE, THIOLASE FOLD, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR J.M.JEZ,M.B.AUSTIN,J.FERRER,M.E.BOWMANN,J.SCHROEDER,J.P.NOEL REVDAT 3 24-FEB-09 1EE0 1 VERSN REVDAT 2 01-APR-03 1EE0 1 JRNL REVDAT 1 31-JAN-01 1EE0 0 JRNL AUTH J.M.JEZ,M.B.AUSTIN,J.FERRER,M.E.BOWMAN,J.SCHRODER, JRNL AUTH 2 J.P.NOEL JRNL TITL STRUCTURAL CONTROL OF POLYKETIDE FORMATION IN JRNL TITL 2 PLANT-SPECIFIC POLYKETIDE SYNTHASES. JRNL REF CHEM.BIOL. V. 7 919 2000 JRNL REFN ISSN 1074-5521 JRNL PMID 11137815 JRNL DOI 10.1016/S1074-5521(00)00041-7 REMARK 1 REMARK 2 REMARK 2 RESOLUTION. 2.05 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.010 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 3 NUMBER OF REFLECTIONS : 60757 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.189 REMARK 3 FREE R VALUE : 0.243 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 3085 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5802 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 108 REMARK 3 SOLVENT ATOMS : 541 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 24.32 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): NULL REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : 0.014 ; NULL REMARK 3 ANGLE DISTANCE (A) : NULL ; NULL REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : NULL ; NULL REMARK 3 H-BOND OR METAL COORDINATION (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : NULL ; NULL REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : NULL ; NULL REMARK 3 MULTIPLE TORSION (A) : NULL ; NULL REMARK 3 H-BOND (X...Y) (A) : NULL ; NULL REMARK 3 H-BOND (X-H...Y) (A) : NULL ; NULL REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : NULL ; NULL REMARK 3 STAGGERED (DEGREES) : NULL ; NULL REMARK 3 TRANSVERSE (DEGREES) : NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1EE0 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-FEB-00. REMARK 100 THE RCSB ID CODE IS RCSB010479. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-SEP-99 REMARK 200 TEMPERATURE (KELVIN) : 105 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : MACSCIENCE REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MACSCIENCE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 60757 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.051 REMARK 200 RESOLUTION RANGE LOW (A) : 41.885 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 200 DATA REDUNDANCY : 2.950 REMARK 200 R MERGE (I) : 0.04200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.05 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.09 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.1 REMARK 200 DATA REDUNDANCY IN SHELL : 2.97 REMARK 200 R MERGE FOR SHELL (I) : 0.20600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: EPMR REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.35 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.75 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.5 M AMMONIUM SULFATE, 50 MM REMARK 280 SUCCINIC ACID (PH 5.5), 2 MM DITHIOTHREITOL, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 80.20833 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 160.41667 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 160.41667 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 80.20833 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7630 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25120 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -2.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 SER A 3 REMARK 465 TYR A 4 REMARK 465 SER A 5 REMARK 465 SER A 6 REMARK 465 ASP A 7 REMARK 465 ASP A 8 REMARK 465 VAL A 9 REMARK 465 GLU A 10 REMARK 465 VAL A 11 REMARK 465 ILE A 12 REMARK 465 ARG A 13 REMARK 465 GLU A 14 REMARK 465 ALA A 15 REMARK 465 GLY A 16 REMARK 465 ARG A 17 REMARK 465 ALA A 18 REMARK 465 GLN A 19 REMARK 465 ALA A 396 REMARK 465 ALA A 397 REMARK 465 VAL A 398 REMARK 465 ALA A 399 REMARK 465 ASN A 400 REMARK 465 GLY A 401 REMARK 465 ASN A 402 REMARK 465 MET B 1 REMARK 465 GLY B 2 REMARK 465 SER B 3 REMARK 465 TYR B 4 REMARK 465 SER B 5 REMARK 465 SER B 6 REMARK 465 ASP B 7 REMARK 465 ASP B 8 REMARK 465 VAL B 9 REMARK 465 GLU B 10 REMARK 465 VAL B 11 REMARK 465 ILE B 12 REMARK 465 ARG B 13 REMARK 465 GLU B 14 REMARK 465 ALA B 15 REMARK 465 GLY B 16 REMARK 465 ARG B 17 REMARK 465 ALA B 18 REMARK 465 GLN B 19 REMARK 465 THR B 395 REMARK 465 ALA B 396 REMARK 465 ALA B 397 REMARK 465 VAL B 398 REMARK 465 ALA B 399 REMARK 465 ASN B 400 REMARK 465 GLY B 401 REMARK 465 ASN B 402 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS(M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 326 CG CD OE1 OE2 REMARK 470 GLU B 208 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 47 NE - CZ - NH1 ANGL. DEV. = 4.0 DEGREES REMARK 500 ASP A 56 CB - CG - OD1 ANGL. DEV. = 6.3 DEGREES REMARK 500 ARG A 73 NE - CZ - NH2 ANGL. DEV. = 3.8 DEGREES REMARK 500 ASP A 80 CB - CG - OD1 ANGL. DEV. = 6.5 DEGREES REMARK 500 ARG A 99 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 PRO A 143 N - CA - CB ANGL. DEV. = 8.3 DEGREES REMARK 500 ARG A 161 NE - CZ - NH2 ANGL. DEV. = -5.4 DEGREES REMARK 500 ARG A 239 CD - NE - CZ ANGL. DEV. = 16.0 DEGREES REMARK 500 ARG A 239 NE - CZ - NH1 ANGL. DEV. = 5.3 DEGREES REMARK 500 ARG A 320 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 ARG A 330 NE - CZ - NH1 ANGL. DEV. = 5.9 DEGREES REMARK 500 ARG A 333 NE - CZ - NH2 ANGL. DEV. = 3.3 DEGREES REMARK 500 LEU A 375 CA - CB - CG ANGL. DEV. = 14.8 DEGREES REMARK 500 LEU A 375 CB - CG - CD1 ANGL. DEV. = 10.9 DEGREES REMARK 500 GLY A 381 CA - C - N ANGL. DEV. = 16.8 DEGREES REMARK 500 GLY A 381 O - C - N ANGL. DEV. = -16.6 DEGREES REMARK 500 ARG A 390 CD - NE - CZ ANGL. DEV. = 12.9 DEGREES REMARK 500 ARG A 390 NE - CZ - NH1 ANGL. DEV. = -5.0 DEGREES REMARK 500 ARG A 390 NE - CZ - NH2 ANGL. DEV. = 9.7 DEGREES REMARK 500 ARG B 73 NE - CZ - NH1 ANGL. DEV. = 5.1 DEGREES REMARK 500 MET B 92 CG - SD - CE ANGL. DEV. = 9.8 DEGREES REMARK 500 ASP B 101 CB - CG - OD1 ANGL. DEV. = 5.5 DEGREES REMARK 500 ARG B 161 NE - CZ - NH1 ANGL. DEV. = 6.8 DEGREES REMARK 500 ARG B 161 NE - CZ - NH2 ANGL. DEV. = -5.8 DEGREES REMARK 500 ARG B 177 NE - CZ - NH2 ANGL. DEV. = 3.2 DEGREES REMARK 500 ARG B 330 NE - CZ - NH1 ANGL. DEV. = -5.8 DEGREES REMARK 500 ARG B 355 NE - CZ - NH1 ANGL. DEV. = -4.4 DEGREES REMARK 500 ARG B 355 NE - CZ - NH2 ANGL. DEV. = 4.0 DEGREES REMARK 500 ARG B 357 NE - CZ - NH1 ANGL. DEV. = -6.9 DEGREES REMARK 500 ARG B 357 NE - CZ - NH2 ANGL. DEV. = 3.7 DEGREES REMARK 500 LEU B 375 CA - CB - CG ANGL. DEV. = 19.8 DEGREES REMARK 500 GLY B 381 CA - C - N ANGL. DEV. = 16.7 DEGREES REMARK 500 GLY B 381 O - C - N ANGL. DEV. = -13.1 DEGREES REMARK 500 ARG B 390 CD - NE - CZ ANGL. DEV. = 9.0 DEGREES REMARK 500 ARG B 390 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 95 3.82 -155.69 REMARK 500 ILE A 343 -130.34 50.81 REMARK 500 SER B 95 3.74 -153.36 REMARK 500 PRO B 143 156.53 -49.34 REMARK 500 ILE B 343 -131.26 48.78 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 TRP A 122 10.92 REMARK 500 PHE B 270 10.85 REMARK 500 PRO B 380 12.76 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CAA A 600 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CAA B 700 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1QLV RELATED DB: PDB REMARK 900 PYRONE SYNTHASE (PYS) FROM GERBERA HYBRIDA DBREF 1EE0 A 1 402 UNP P48391 2PS_GERHY 1 402 DBREF 1EE0 B 1 402 UNP P48391 2PS_GERHY 1 402 SEQADV 1EE0 CSD A 169 UNP P48391 CYS 169 MODIFIED RESIDUE SEQADV 1EE0 MET A 259 UNP P48391 VAL 259 CONFLICT SEQADV 1EE0 CSD B 169 UNP P48391 CYS 169 MODIFIED RESIDUE SEQADV 1EE0 MET B 259 UNP P48391 VAL 259 CONFLICT SEQRES 1 A 402 MET GLY SER TYR SER SER ASP ASP VAL GLU VAL ILE ARG SEQRES 2 A 402 GLU ALA GLY ARG ALA GLN GLY LEU ALA THR ILE LEU ALA SEQRES 3 A 402 ILE GLY THR ALA THR PRO PRO ASN CYS VAL ALA GLN ALA SEQRES 4 A 402 ASP TYR ALA ASP TYR TYR PHE ARG VAL THR LYS SER GLU SEQRES 5 A 402 HIS MET VAL ASP LEU LYS GLU LYS PHE LYS ARG ILE CYS SEQRES 6 A 402 GLU LYS THR ALA ILE LYS LYS ARG TYR LEU ALA LEU THR SEQRES 7 A 402 GLU ASP TYR LEU GLN GLU ASN PRO THR MET CYS GLU PHE SEQRES 8 A 402 MET ALA PRO SER LEU ASN ALA ARG GLN ASP LEU VAL VAL SEQRES 9 A 402 THR GLY VAL PRO MET LEU GLY LYS GLU ALA ALA VAL LYS SEQRES 10 A 402 ALA ILE ASP GLU TRP GLY LEU PRO LYS SER LYS ILE THR SEQRES 11 A 402 HIS LEU ILE PHE CYS THR THR ALA GLY VAL ASP MET PRO SEQRES 12 A 402 GLY ALA ASP TYR GLN LEU VAL LYS LEU LEU GLY LEU SER SEQRES 13 A 402 PRO SER VAL LYS ARG TYR MET LEU TYR GLN GLN GLY CSD SEQRES 14 A 402 ALA ALA GLY GLY THR VAL LEU ARG LEU ALA LYS ASP LEU SEQRES 15 A 402 ALA GLU ASN ASN LYS GLY SER ARG VAL LEU ILE VAL CYS SEQRES 16 A 402 SER GLU ILE THR ALA ILE LEU PHE HIS GLY PRO ASN GLU SEQRES 17 A 402 ASN HIS LEU ASP SER LEU VAL ALA GLN ALA LEU PHE GLY SEQRES 18 A 402 ASP GLY ALA ALA ALA LEU ILE VAL GLY SER GLY PRO HIS SEQRES 19 A 402 LEU ALA VAL GLU ARG PRO ILE PHE GLU ILE VAL SER THR SEQRES 20 A 402 ASP GLN THR ILE LEU PRO ASP THR GLU LYS ALA MET LYS SEQRES 21 A 402 LEU HIS LEU ARG GLU GLY GLY LEU THR PHE GLN LEU HIS SEQRES 22 A 402 ARG ASP VAL PRO LEU MET VAL ALA LYS ASN ILE GLU ASN SEQRES 23 A 402 ALA ALA GLU LYS ALA LEU SER PRO LEU GLY ILE THR ASP SEQRES 24 A 402 TRP ASN SER VAL PHE TRP MET VAL HIS PRO GLY GLY ARG SEQRES 25 A 402 ALA ILE LEU ASP GLN VAL GLU ARG LYS LEU ASN LEU LYS SEQRES 26 A 402 GLU ASP LYS LEU ARG ALA SER ARG HIS VAL LEU SER GLU SEQRES 27 A 402 TYR GLY ASN LEU ILE SER ALA CYS VAL LEU PHE ILE ILE SEQRES 28 A 402 ASP GLU VAL ARG LYS ARG SER MET ALA GLU GLY LYS SER SEQRES 29 A 402 THR THR GLY GLU GLY LEU ASP CYS GLY VAL LEU PHE GLY SEQRES 30 A 402 PHE GLY PRO GLY MET THR VAL GLU THR VAL VAL LEU ARG SEQRES 31 A 402 SER VAL ARG VAL THR ALA ALA VAL ALA ASN GLY ASN SEQRES 1 B 402 MET GLY SER TYR SER SER ASP ASP VAL GLU VAL ILE ARG SEQRES 2 B 402 GLU ALA GLY ARG ALA GLN GLY LEU ALA THR ILE LEU ALA SEQRES 3 B 402 ILE GLY THR ALA THR PRO PRO ASN CYS VAL ALA GLN ALA SEQRES 4 B 402 ASP TYR ALA ASP TYR TYR PHE ARG VAL THR LYS SER GLU SEQRES 5 B 402 HIS MET VAL ASP LEU LYS GLU LYS PHE LYS ARG ILE CYS SEQRES 6 B 402 GLU LYS THR ALA ILE LYS LYS ARG TYR LEU ALA LEU THR SEQRES 7 B 402 GLU ASP TYR LEU GLN GLU ASN PRO THR MET CYS GLU PHE SEQRES 8 B 402 MET ALA PRO SER LEU ASN ALA ARG GLN ASP LEU VAL VAL SEQRES 9 B 402 THR GLY VAL PRO MET LEU GLY LYS GLU ALA ALA VAL LYS SEQRES 10 B 402 ALA ILE ASP GLU TRP GLY LEU PRO LYS SER LYS ILE THR SEQRES 11 B 402 HIS LEU ILE PHE CYS THR THR ALA GLY VAL ASP MET PRO SEQRES 12 B 402 GLY ALA ASP TYR GLN LEU VAL LYS LEU LEU GLY LEU SER SEQRES 13 B 402 PRO SER VAL LYS ARG TYR MET LEU TYR GLN GLN GLY CSD SEQRES 14 B 402 ALA ALA GLY GLY THR VAL LEU ARG LEU ALA LYS ASP LEU SEQRES 15 B 402 ALA GLU ASN ASN LYS GLY SER ARG VAL LEU ILE VAL CYS SEQRES 16 B 402 SER GLU ILE THR ALA ILE LEU PHE HIS GLY PRO ASN GLU SEQRES 17 B 402 ASN HIS LEU ASP SER LEU VAL ALA GLN ALA LEU PHE GLY SEQRES 18 B 402 ASP GLY ALA ALA ALA LEU ILE VAL GLY SER GLY PRO HIS SEQRES 19 B 402 LEU ALA VAL GLU ARG PRO ILE PHE GLU ILE VAL SER THR SEQRES 20 B 402 ASP GLN THR ILE LEU PRO ASP THR GLU LYS ALA MET LYS SEQRES 21 B 402 LEU HIS LEU ARG GLU GLY GLY LEU THR PHE GLN LEU HIS SEQRES 22 B 402 ARG ASP VAL PRO LEU MET VAL ALA LYS ASN ILE GLU ASN SEQRES 23 B 402 ALA ALA GLU LYS ALA LEU SER PRO LEU GLY ILE THR ASP SEQRES 24 B 402 TRP ASN SER VAL PHE TRP MET VAL HIS PRO GLY GLY ARG SEQRES 25 B 402 ALA ILE LEU ASP GLN VAL GLU ARG LYS LEU ASN LEU LYS SEQRES 26 B 402 GLU ASP LYS LEU ARG ALA SER ARG HIS VAL LEU SER GLU SEQRES 27 B 402 TYR GLY ASN LEU ILE SER ALA CYS VAL LEU PHE ILE ILE SEQRES 28 B 402 ASP GLU VAL ARG LYS ARG SER MET ALA GLU GLY LYS SER SEQRES 29 B 402 THR THR GLY GLU GLY LEU ASP CYS GLY VAL LEU PHE GLY SEQRES 30 B 402 PHE GLY PRO GLY MET THR VAL GLU THR VAL VAL LEU ARG SEQRES 31 B 402 SER VAL ARG VAL THR ALA ALA VAL ALA ASN GLY ASN MODRES 1EE0 CSD A 169 CYS 3-SULFINOALANINE MODRES 1EE0 CSD B 169 CYS 3-SULFINOALANINE HET CSD A 169 8 HET CSD B 169 8 HET CAA A 600 54 HET CAA B 700 54 HETNAM CSD 3-SULFINOALANINE HETNAM CAA ACETOACETYL-COENZYME A HETSYN CSD S-CYSTEINESULFINIC ACID; S-SULFINOCYSTEINE FORMUL 1 CSD 2(C3 H7 N O4 S) FORMUL 3 CAA 2(C25 H40 N7 O18 P3 S) FORMUL 5 HOH *541(H2 O) HELIX 1 1 GLN A 38 THR A 49 1 12 HELIX 2 2 MET A 54 THR A 68 1 15 HELIX 3 3 THR A 78 ASN A 85 1 8 HELIX 4 4 PRO A 86 GLU A 90 5 5 HELIX 5 5 SER A 95 GLY A 123 1 29 HELIX 6 6 PRO A 125 ILE A 129 5 5 HELIX 7 7 GLY A 144 GLY A 154 1 11 HELIX 8 8 ALA A 170 ASN A 186 1 17 HELIX 9 9 ILE A 198 PHE A 203 5 6 HELIX 10 10 HIS A 210 GLN A 217 1 8 HELIX 11 11 THR A 255 LYS A 257 5 3 HELIX 12 12 ASP A 275 SER A 293 1 19 HELIX 13 13 PRO A 294 GLY A 296 5 3 HELIX 14 14 ASP A 299 VAL A 303 5 5 HELIX 15 15 GLY A 311 LEU A 322 1 12 HELIX 16 16 LEU A 329 GLY A 340 1 12 HELIX 17 17 LEU A 342 SER A 344 5 3 HELIX 18 18 ALA A 345 GLU A 361 1 17 HELIX 19 19 GLN B 38 THR B 49 1 12 HELIX 20 20 MET B 54 THR B 68 1 15 HELIX 21 21 THR B 78 ASN B 85 1 8 HELIX 22 22 PRO B 86 GLU B 90 5 5 HELIX 23 23 SER B 95 GLY B 123 1 29 HELIX 24 24 PRO B 125 ILE B 129 5 5 HELIX 25 25 GLY B 144 GLY B 154 1 11 HELIX 26 26 ALA B 170 ASN B 186 1 17 HELIX 27 27 ILE B 198 PHE B 203 5 6 HELIX 28 28 HIS B 210 GLN B 217 1 8 HELIX 29 29 THR B 255 LYS B 257 5 3 HELIX 30 30 ASP B 275 SER B 293 1 19 HELIX 31 31 PRO B 294 GLY B 296 5 3 HELIX 32 32 ASP B 299 VAL B 303 5 5 HELIX 33 33 GLY B 311 LEU B 322 1 12 HELIX 34 34 LEU B 329 GLY B 340 1 12 HELIX 35 35 LEU B 342 SER B 344 5 3 HELIX 36 36 ALA B 345 GLU B 361 1 17 SHEET 1 A 9 LYS A 160 LEU A 164 0 SHEET 2 A 9 HIS A 131 CYS A 135 1 N LEU A 132 O LYS A 160 SHEET 3 A 9 VAL A 191 GLU A 197 1 O LEU A 192 N ILE A 133 SHEET 4 A 9 GLY A 223 GLY A 230 -1 O GLY A 223 N GLU A 197 SHEET 5 A 9 THR A 23 ALA A 30 -1 N THR A 23 O GLY A 230 SHEET 6 A 9 PHE A 242 ILE A 251 -1 O PHE A 242 N ILE A 24 SHEET 7 A 9 THR A 383 SER A 391 -1 N VAL A 384 O THR A 250 SHEET 8 A 9 CYS A 372 GLY A 379 -1 O GLY A 373 N LEU A 389 SHEET 9 A 9 PHE A 304 VAL A 307 1 O PHE A 304 N VAL A 374 SHEET 1 B 2 CYS A 35 ALA A 37 0 SHEET 2 B 2 LYS A 72 TYR A 74 -1 O ARG A 73 N VAL A 36 SHEET 1 C 3 GLN B 271 LEU B 272 0 SHEET 2 C 3 MET B 259 ARG B 264 -1 N LYS B 260 O GLN B 271 SHEET 3 C 3 ASP A 141 MET A 142 -1 O MET A 142 N LEU B 261 SHEET 1 D 3 GLN B 271 LEU B 272 0 SHEET 2 D 3 MET B 259 ARG B 264 -1 N LYS B 260 O GLN B 271 SHEET 3 D 3 GLY B 267 LEU B 268 -1 N GLY B 267 O ARG B 264 SHEET 1 E 3 ASP B 141 MET B 142 0 SHEET 2 E 3 MET A 259 ARG A 264 -1 N LEU A 261 O MET B 142 SHEET 3 E 3 GLY A 267 LEU A 268 -1 N GLY A 267 O ARG A 264 SHEET 1 F 3 ASP B 141 MET B 142 0 SHEET 2 F 3 MET A 259 ARG A 264 -1 N LEU A 261 O MET B 142 SHEET 3 F 3 GLN A 271 LEU A 272 -1 O GLN A 271 N LYS A 260 SHEET 1 G 9 LYS B 160 LEU B 164 0 SHEET 2 G 9 HIS B 131 CYS B 135 1 N LEU B 132 O LYS B 160 SHEET 3 G 9 VAL B 191 GLU B 197 1 O LEU B 192 N ILE B 133 SHEET 4 G 9 GLY B 223 GLY B 230 -1 O GLY B 223 N GLU B 197 SHEET 5 G 9 THR B 23 ALA B 30 -1 N THR B 23 O GLY B 230 SHEET 6 G 9 PHE B 242 ILE B 251 -1 O PHE B 242 N ILE B 24 SHEET 7 G 9 THR B 383 SER B 391 -1 N VAL B 384 O THR B 250 SHEET 8 G 9 CYS B 372 GLY B 379 -1 O GLY B 373 N LEU B 389 SHEET 9 G 9 PHE B 304 VAL B 307 1 O PHE B 304 N VAL B 374 SHEET 1 H 2 CYS B 35 ALA B 37 0 SHEET 2 H 2 LYS B 72 TYR B 74 -1 O ARG B 73 N VAL B 36 LINK C GLY A 168 N CSD A 169 1555 1555 1.32 LINK C CSD A 169 N ALA A 170 1555 1555 1.31 LINK C GLY B 168 N CSD B 169 1555 1555 1.40 LINK C CSD B 169 N ALA B 170 1555 1555 1.31 CISPEP 1 MET A 142 PRO A 143 0 -8.46 CISPEP 2 GLY A 381 MET A 382 0 -8.64 CISPEP 3 MET B 142 PRO B 143 0 -9.37 CISPEP 4 GLY B 381 MET B 382 0 -13.04 SITE 1 AC1 29 LYS A 60 ARG A 63 ILE A 64 LYS A 67 SITE 2 AC1 29 GLY A 168 CSD A 169 ASP A 212 VAL A 215 SITE 3 AC1 29 PHE A 220 MET A 259 LEU A 261 PHE A 270 SITE 4 AC1 29 LEU A 272 HIS A 273 ARG A 274 VAL A 276 SITE 5 AC1 29 GLY A 310 GLY A 311 ARG A 312 ALA A 313 SITE 6 AC1 29 HOH A 624 HOH A 700 HOH A 734 HOH A 740 SITE 7 AC1 29 HOH A 764 HOH A 789 HOH A 806 HOH A 814 SITE 8 AC1 29 MET B 142 SITE 1 AC2 27 MET A 142 LYS B 60 ARG B 63 ILE B 64 SITE 2 AC2 27 LYS B 67 GLY B 168 CSD B 169 ASP B 212 SITE 3 AC2 27 VAL B 215 PHE B 220 MET B 259 LEU B 261 SITE 4 AC2 27 PHE B 270 LEU B 272 ARG B 274 GLY B 310 SITE 5 AC2 27 GLY B 311 ARG B 312 ALA B 313 PRO B 380 SITE 6 AC2 27 HOH B 748 HOH B 788 HOH B 818 HOH B 857 SITE 7 AC2 27 HOH B 867 HOH B 938 HOH B 952 CRYST1 83.406 83.406 240.625 90.00 90.00 120.00 P 31 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011990 0.006922 0.000000 0.00000 SCALE2 0.000000 0.013844 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004156 0.00000