HEADER CHAPERONIN 30-JUN-97 1EGS TITLE NMR STRUCTURE OF GROES MOBILE LOOP RESIDUES 19-27 IN THE SYNTHETIC TITLE 2 PEPTIDE (RESIDUES 13-32) BOUND TO GROEL, 20 STRUCTURES COMPND MOL_ID: 1; COMPND 2 MOLECULE: GROES; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: MOBILE LOOP; COMPND 5 SYNONYM: 10 KD CHAPERONIN, PROTEIN CPN10; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562 KEYWDS CHAPERONIN, PROTEIN FOLDING, HEAT SHOCK EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR S.J.LANDRY REVDAT 5 23-OCT-24 1EGS 1 REMARK REVDAT 4 16-FEB-22 1EGS 1 REMARK LINK REVDAT 3 24-FEB-09 1EGS 1 VERSN REVDAT 2 01-APR-03 1EGS 1 JRNL REVDAT 1 17-SEP-97 1EGS 0 JRNL AUTH S.J.LANDRY,A.TAHER,C.GEORGOPOULOS,S.M.VAN DER VIES JRNL TITL INTERPLAY OF STRUCTURE AND DISORDER IN COCHAPERONIN MOBILE JRNL TITL 2 LOOPS. JRNL REF PROC.NATL.ACAD.SCI.USA V. 93 11622 1996 JRNL REFN ISSN 0027-8424 JRNL PMID 8876186 JRNL DOI 10.1073/PNAS.93.21.11622 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH S.J.LANDRY,J.ZEILSTRA-RYALLS,O.FAYET,C.GEORGOPOULOS, REMARK 1 AUTH 2 L.M.GIERASCH REMARK 1 TITL CHARACTERIZATION OF A FUNCTIONALLY IMPORTANT MOBILE DOMAIN REMARK 1 TITL 2 OF GROES REMARK 1 REF NATURE V. 364 255 1993 REMARK 1 REFN ISSN 0028-0836 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : DISCOVER REMARK 3 AUTHORS : BIOSYM REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REFINEMENT DETAILS CAN BE FOUND IN THE REMARK 3 JRNL CITATION ABOVE. REMARK 4 REMARK 4 1EGS COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000173049. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 303 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : NULL REMARK 210 SAMPLE CONTENTS : NULL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : NOESY; TOCSY REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ REMARK 210 SPECTROMETER MODEL : VXR500 REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : DISCOVER REMARK 210 METHOD USED : MOLECULAR DYNAMICS AND SIMULATED REMARK 210 ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 20 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : NULL REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 2 LYS A 3 N - CA - CB ANGL. DEV. = -11.3 DEGREES REMARK 500 5 LYS A 3 N - CA - CB ANGL. DEV. = -11.7 DEGREES REMARK 500 5 VAL A 9 CB - CA - C ANGL. DEV. = 12.5 DEGREES REMARK 500 5 LEU A 10 N - CA - CB ANGL. DEV. = -12.9 DEGREES REMARK 500 5 LEU A 10 CB - CG - CD1 ANGL. DEV. = 14.1 DEGREES REMARK 500 6 LEU A 10 N - CA - CB ANGL. DEV. = -14.2 DEGREES REMARK 500 6 LEU A 10 CB - CG - CD1 ANGL. DEV. = 14.1 DEGREES REMARK 500 10 LEU A 10 N - CA - CB ANGL. DEV. = -14.7 DEGREES REMARK 500 10 LEU A 10 CB - CG - CD1 ANGL. DEV. = 15.2 DEGREES REMARK 500 11 LEU A 10 N - CA - CB ANGL. DEV. = -14.6 DEGREES REMARK 500 11 LEU A 10 CB - CG - CD1 ANGL. DEV. = 14.5 DEGREES REMARK 500 12 LYS A 3 N - CA - CB ANGL. DEV. = -11.1 DEGREES REMARK 500 12 LEU A 10 N - CA - CB ANGL. DEV. = -13.3 DEGREES REMARK 500 12 LEU A 10 CB - CG - CD1 ANGL. DEV. = 16.0 DEGREES REMARK 500 15 LEU A 10 N - CA - CB ANGL. DEV. = -13.5 DEGREES REMARK 500 15 LEU A 10 CB - CG - CD1 ANGL. DEV. = 15.9 DEGREES REMARK 500 16 GLY A 6 CA - C - N ANGL. DEV. = 13.2 DEGREES REMARK 500 18 LEU A 10 N - CA - CB ANGL. DEV. = -13.6 DEGREES REMARK 500 18 LEU A 10 CB - CG - CD1 ANGL. DEV. = 16.0 DEGREES REMARK 500 19 LYS A 3 N - CA - CB ANGL. DEV. = -10.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ALA A 5 90.30 -68.15 REMARK 500 1 ILE A 8 59.79 -101.15 REMARK 500 1 VAL A 9 81.44 -28.89 REMARK 500 2 ALA A 5 92.12 -68.12 REMARK 500 2 ILE A 8 67.77 -101.79 REMARK 500 2 VAL A 9 82.64 -31.03 REMARK 500 5 VAL A 9 77.00 46.21 REMARK 500 6 ILE A 8 55.12 -96.35 REMARK 500 6 VAL A 9 79.40 -26.23 REMARK 500 8 VAL A 9 88.73 -42.92 REMARK 500 9 LYS A 3 -166.28 -72.06 REMARK 500 9 SER A 4 144.66 42.40 REMARK 500 10 ILE A 8 53.83 -101.85 REMARK 500 10 VAL A 9 81.47 -31.65 REMARK 500 11 VAL A 9 78.98 -27.48 REMARK 500 12 VAL A 9 55.40 -118.66 REMARK 500 13 ALA A 5 92.14 -69.07 REMARK 500 13 VAL A 9 82.91 -32.82 REMARK 500 14 VAL A 9 86.72 -42.64 REMARK 500 15 ILE A 8 77.68 -108.17 REMARK 500 15 VAL A 9 52.07 -119.72 REMARK 500 16 ILE A 8 54.30 -98.13 REMARK 500 16 VAL A 9 81.39 -32.16 REMARK 500 17 ILE A 8 78.49 -111.51 REMARK 500 17 VAL A 9 78.85 -102.41 REMARK 500 18 VAL A 9 52.34 -119.11 REMARK 500 20 ILE A 8 70.56 38.71 REMARK 500 20 VAL A 9 74.60 -107.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ILE A 8 VAL A 9 6 -149.67 REMARK 500 ALA A 5 GLY A 6 8 -148.60 REMARK 500 ILE A 8 VAL A 9 8 -146.72 REMARK 500 LYS A 3 SER A 4 9 129.54 REMARK 500 SER A 4 ALA A 5 9 137.99 REMARK 500 ALA A 5 GLY A 6 10 -149.17 REMARK 500 ILE A 8 VAL A 9 10 -148.39 REMARK 500 ALA A 5 GLY A 6 11 -148.88 REMARK 500 ILE A 8 VAL A 9 11 -147.95 REMARK 500 VAL A 9 LEU A 10 12 129.30 REMARK 500 ALA A 5 GLY A 6 14 -147.99 REMARK 500 ILE A 8 VAL A 9 14 -145.15 REMARK 500 ILE A 8 VAL A 9 15 -146.50 REMARK 500 VAL A 9 LEU A 10 15 132.32 REMARK 500 GLY A 7 ILE A 8 16 -138.82 REMARK 500 ILE A 8 VAL A 9 16 -141.88 REMARK 500 ILE A 8 VAL A 9 18 -140.75 REMARK 500 VAL A 9 LEU A 10 18 133.11 REMARK 500 ILE A 8 VAL A 9 20 -149.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NH2 A 11 DBREF 1EGS A 2 10 UNP P0A6F9 CH10_ECOLI 19 27 SEQRES 1 A 11 ACE THR LYS SER ALA GLY GLY ILE VAL LEU NH2 HET ACE A 1 6 HET NH2 A 11 3 HETNAM ACE ACETYL GROUP HETNAM NH2 AMINO GROUP FORMUL 1 ACE C2 H4 O FORMUL 1 NH2 H2 N LINK C ACE A 1 N THR A 2 1555 1555 1.34 LINK C LEU A 10 N NH2 A 11 1555 1555 1.33 CISPEP 1 GLY A 7 ILE A 8 9 -21.43 CISPEP 2 GLY A 6 GLY A 7 16 -5.79 SITE 1 AC2 1 LEU A 10 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1 HETATM 1 C ACE A 1 3.219 -4.684 2.796 1.00 2.37 C HETATM 2 O ACE A 1 3.416 -3.853 3.687 1.00 3.23 O HETATM 3 CH3 ACE A 1 2.611 -6.035 3.134 1.00 2.94 C HETATM 4 H1 ACE A 1 1.665 -6.191 2.584 1.00 3.13 H HETATM 5 H2 ACE A 1 2.393 -6.110 4.215 1.00 4.06 H HETATM 6 H3 ACE A 1 3.300 -6.857 2.868 1.00 3.23 H