HEADER RIBOSOME 07-MAR-00 1EKC OBSLTE 30-OCT-00 1EKC 1G1X TITLE STRUCTURE OF RIBOSOMAL PROTEINS S15, S6, S18, AND 16S TITLE 2 RIBOSOMAL RNA COMPND MOL_ID: 1; COMPND 2 MOLECULE: 30S RIBOSOMAL PROTEIN S6; COMPND 3 CHAIN: A, F; COMPND 4 MOL_ID: 2; COMPND 5 MOLECULE: 30S RIBOSOMAL PROTEIN S15; COMPND 6 CHAIN: B, G; COMPND 7 MOL_ID: 3; COMPND 8 MOLECULE: 30S RIBOSOMAL PROTEIN S18; COMPND 9 CHAIN: C, H; COMPND 10 MOL_ID: 4; COMPND 11 MOLECULE: 16S RIBOSOMAL RNA; COMPND 12 CHAIN: D, I; COMPND 13 FRAGMENT: RESIDUES 582-675; COMPND 14 ENGINEERED: YES; COMPND 15 MOL_ID: 5; COMPND 16 MOLECULE: 16S RIBOSOMAL RNA; COMPND 17 CHAIN: E, J; COMPND 18 FRAGMENT: RESIDUES 716-759; COMPND 19 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; SOURCE 3 ORGANISM_COMMON: BACTERIA; SOURCE 4 MOL_ID: 2; SOURCE 5 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; SOURCE 6 ORGANISM_COMMON: BACTERIA; SOURCE 7 MOL_ID: 3; SOURCE 8 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; SOURCE 9 ORGANISM_COMMON: BACTERIA; SOURCE 10 MOL_ID: 4; SOURCE 11 SYNTHETIC: YES; SOURCE 12 OTHER_DETAILS: SEQUENCE FROM T. THERMOPHILUS; SOURCE 13 MOL_ID: 5; SOURCE 14 SYNTHETIC: YES; SOURCE 15 OTHER_DETAILS: SEQUENCE FROM T. THERMOPHILUS KEYWDS RIBOSOMAL PROTEINS S15, S6, S18, S30 RIBOSOMAL SUBUNIT, RNA, KEYWDS 2 RIBOSOME EXPDTA X-RAY DIFFRACTION AUTHOR S.C.AGALAROV,G.S.PRASAD,P.M.FUNKE,C.D.STOUT,J.R.WILLIAMSON REVDAT 3 30-OCT-00 1EKC 1 OBSLTE REVDAT 2 24-APR-00 1EKC 1 REMARK REVDAT 1 17-APR-00 1EKC 0 JRNL AUTH S.C.AGALAROV,G.S.PRASAD,P.M.FUNKE,C.D.STOUT, JRNL AUTH 2 J.R.WILLIAMSON JRNL TITL STRUCTURE OF THE S15,S6,S18-RRNA COMPLEX: ASSEMBLY JRNL TITL 2 OF THE 30S RIBOSOME CENTRAL DOMAIN JRNL REF SCIENCE V. 288 107 2000 JRNL REFN ASTM SCIEAS US ISSN 0036-8075 REMARK 1 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 57348 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.266 REMARK 3 FREE R VALUE : 0.298 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.200 REMARK 3 FREE R VALUE TEST SET COUNT : 1289 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 8 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.72 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.90 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 7071 REMARK 3 BIN R VALUE (WORKING SET) : 0.4200 REMARK 3 BIN FREE R VALUE : 0.4800 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 2.20 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 60 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3874 REMARK 3 NUCLEIC ACID ATOMS : 3646 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 71.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 44.48 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.58 REMARK 3 ESD FROM SIGMAA (A) : 0.73 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.68 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.65 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.023 REMARK 3 BOND ANGLES (DEGREES) : 2.22 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 19.45 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.81 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 4.340 ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : 6.350 ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : 5.580 ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : 7.750 ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : DNA-RNA_REP.PARAM REMARK 3 PARAMETER FILE 3 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : DNA-RNA.TOP REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1EKC COMPLIES WITH FORMAT V. 2.3, 09-JULY-1998 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY THE NUCLEIC ACID DATABASE REMARK 100 ON 08-MAR-2000. REMARK 100 THE NDB ID CODE IS RR0007. REMARK 105 REMARK 105 THE PROTEIN DATA BANK HAS ADOPTED THE SACCHARIDE CHEMISTS REMARK 105 NOMENCLATURE FOR ATOMS OF THE DEOXYRIBOSE/RIBOSE MOIETY REMARK 105 RATHER THAN THAT OF THE NUCLEOSIDE CHEMISTS. THE RING REMARK 105 OXYGEN ATOM IS LABELLED O4* INSTEAD OF O1*. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-APR-1999 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 7.00 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : 9-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9800 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : TRUNCATE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 57348 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : 0.05100 REMARK 200 R SYM (I) : 0.27900 REMARK 200 FOR THE DATA SET : 9.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.69 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.80 REMARK 200 R MERGE FOR SHELL (I) : 0.41000 REMARK 200 R SYM FOR SHELL (I) : 0.27900 REMARK 200 FOR SHELL : 1.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MIR REMARK 200 SOFTWARE USED: MLPHARE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 75.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.40 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.8 M (NH4)2SO4, 20 MM MGCL2, 50 MM REMARK 280 POTASSIUM CACODYLATE, PH 7.0, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 X-Y,X,5/6+Z REMARK 290 3555 -Y,X-Y,2/3+Z REMARK 290 4555 -X,-Y,1/2+Z REMARK 290 5555 -X+Y,-X,1/3+Z REMARK 290 6555 Y,-X+Y,1/6+Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 94.83333 REMARK 290 SMTRY1 3 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 75.86667 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 56.90000 REMARK 290 SMTRY1 5 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 37.93333 REMARK 290 SMTRY1 6 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 18.96667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT REMARK 300 WHICH CONSISTS OF 10CHAIN(S). SEE REMARK 350 FOR REMARK 300 INFORMATION ON GENERATING THE BIOLOGICAL MOLECULE(S). REMARK 350 REMARK 350 GENERATING THE BIOMOLECULE REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, E, A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMOLECULE: 2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: I, J, F, G, H REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 A D 676 REMARK 465 MET B 0 REMARK 465 MET C 1 REMARK 465 SER C 2 REMARK 465 THR C 3 REMARK 465 LYS C 4 REMARK 465 ASN C 5 REMARK 465 ALA C 6 REMARK 465 LYS C 7 REMARK 465 PRO C 8 REMARK 465 LYS C 9 REMARK 465 LYS C 10 REMARK 465 GLU C 11 REMARK 465 ALA C 12 REMARK 465 GLN C 13 REMARK 465 ARG C 14 REMARK 465 ARG C 15 REMARK 465 PRO C 16 REMARK 465 SER C 17 REMARK 465 ARG C 18 REMARK 465 LYS C 19 REMARK 465 ALA C 20 REMARK 465 LYS C 21 REMARK 465 VAL C 22 REMARK 465 LYS C 23 REMARK 465 ALA C 24 REMARK 465 THR C 25 REMARK 465 LEU C 26 REMARK 465 GLY C 27 REMARK 465 GLU C 28 REMARK 465 PHE C 29 REMARK 465 ASP C 30 REMARK 465 LEU C 31 REMARK 465 ARG C 32 REMARK 465 ASP C 33 REMARK 465 TYR C 34 REMARK 465 LEU C 85 REMARK 465 VAL C 86 REMARK 465 ARG C 87 REMARK 465 LYS C 88 REMARK 465 MET G 0 REMARK 465 MET H 1 REMARK 465 SER H 2 REMARK 465 THR H 3 REMARK 465 LYS H 4 REMARK 465 ASN H 5 REMARK 465 ALA H 6 REMARK 465 LYS H 7 REMARK 465 PRO H 8 REMARK 465 LYS H 9 REMARK 465 LYS H 10 REMARK 465 GLU H 11 REMARK 465 ALA H 12 REMARK 465 GLN H 13 REMARK 465 ARG H 14 REMARK 465 ARG H 15 REMARK 465 PRO H 16 REMARK 465 SER H 17 REMARK 465 ARG H 18 REMARK 465 LYS H 19 REMARK 465 ALA H 20 REMARK 465 LYS H 21 REMARK 465 VAL H 22 REMARK 465 LYS H 23 REMARK 465 ALA H 24 REMARK 465 THR H 25 REMARK 465 LEU H 26 REMARK 465 GLY H 27 REMARK 465 GLU H 28 REMARK 465 PHE H 29 REMARK 465 ASP H 30 REMARK 465 LEU H 31 REMARK 465 ARG H 32 REMARK 465 ASP H 33 REMARK 465 TYR H 34 REMARK 465 LEU H 85 REMARK 465 VAL H 86 REMARK 465 ARG H 87 REMARK 465 LYS H 88 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS(M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG C 35 CG CD NE CZ NH1 NH2 REMARK 470 ASN C 36 CG OD1 ND2 REMARK 470 VAL C 37 CG1 CG2 REMARK 470 GLU C 38 CG CD OE1 OE2 REMARK 470 VAL C 39 CG1 CG2 REMARK 470 LEU C 40 CG CD1 CD2 REMARK 470 LYS C 41 CG CD CE NZ REMARK 470 LYS C 49 CG CD CE NZ REMARK 470 LYS C 84 CG CD CE NZ REMARK 470 ARG H 35 CG CD NE CZ NH1 NH2 REMARK 470 ASN H 36 CG OD1 ND2 REMARK 470 VAL H 37 CG1 CG2 REMARK 470 GLU H 38 CG CD OE1 OE2 REMARK 470 VAL H 39 CG1 CG2 REMARK 470 LEU H 40 CG CD1 CD2 REMARK 470 LYS H 41 CG CD CE NZ REMARK 470 LYS H 49 CG CD CE NZ REMARK 470 LYS H 84 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI REMARK 500 O4 U D 652 O2* G E 752 2.12 REMARK 500 O2* U D 652 O5* A D 653 2.13 REMARK 500 O PHE H 43 OG1 THR H 69 2.18 REMARK 500 O2* A D 653 O1P G D 654 2.19 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),F6.3) REMARK 500 REMARK 500 EXPECTED VALUES: ENGH AND HUBER, 1991 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 MET B 58 SD MET B 58 CE -0.104 REMARK 500 PRO G 1 CB PRO G 1 CG 0.089 REMARK 500 MET G 58 SD MET G 58 CE -0.082 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES: ENGH AND HUBER, 1991 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLU A 5 N - CA - C ANGL. DEV. = -9.0 DEGREES REMARK 500 VAL A 6 N - CA - C ANGL. DEV. = 8.5 DEGREES REMARK 500 ARG A 47 N - CA - C ANGL. DEV. = 9.3 DEGREES REMARK 500 GLN A 64 N - CA - C ANGL. DEV. =-10.1 DEGREES REMARK 500 GLU A 66 N - CA - C ANGL. DEV. = -8.7 DEGREES REMARK 500 VAL A 85 N - CA - C ANGL. DEV. = -9.0 DEGREES REMARK 500 VAL B 44 N - CA - C ANGL. DEV. =-18.3 DEGREES REMARK 500 ARG C 53 N - CA - C ANGL. DEV. =-17.5 DEGREES REMARK 500 ILE C 65 N - CA - C ANGL. DEV. = -8.5 DEGREES REMARK 500 LEU C 79 N - CA - C ANGL. DEV. = 20.7 DEGREES REMARK 500 PRO C 80 N - CA - C ANGL. DEV. =-12.9 DEGREES REMARK 500 THR C 82 N - CA - C ANGL. DEV. = 9.9 DEGREES REMARK 500 GLU C 83 N - CA - C ANGL. DEV. = -8.5 DEGREES REMARK 500 GLU F 5 N - CA - C ANGL. DEV. = -9.4 DEGREES REMARK 500 ILE F 25 N - CA - C ANGL. DEV. = -8.6 DEGREES REMARK 500 ARG F 47 N - CA - C ANGL. DEV. = 9.4 DEGREES REMARK 500 TYR F 50 N - CA - C ANGL. DEV. =-13.2 DEGREES REMARK 500 GLN F 64 N - CA - C ANGL. DEV. = -8.4 DEGREES REMARK 500 ILE G 2 N - CA - C ANGL. DEV. = 12.7 DEGREES REMARK 500 PRO H 52 N - CA - C ANGL. DEV. = 10.7 DEGREES REMARK 500 ARG H 53 N - CA - C ANGL. DEV. =-22.6 DEGREES REMARK 500 THR H 56 N - CA - C ANGL. DEV. = 12.4 DEGREES REMARK 500 LEU H 79 N - CA - C ANGL. DEV. = 9.6 DEGREES REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 54 -47.45 85.68 REMARK 500 TYR A 63 127.89 75.00 REMARK 500 ARG B 87 -121.36 82.47 REMARK 500 GLU C 38 115.40 148.65 REMARK 500 ARG C 55 -78.55 60.19 REMARK 500 THR C 56 -111.47 37.36 REMARK 500 LYS C 61 137.45 90.37 REMARK 500 LEU C 79 136.36 40.16 REMARK 500 LEU F 48 154.23 92.66 REMARK 500 GLU H 38 168.56 108.19 REMARK 500 ARG H 55 -52.83 77.54 REMARK 500 LYS H 61 -130.75 23.80 DBREF 1EKC A 1 98 UNP P23370 RS6_THETH 1 98 DBREF 1EKC F 1 98 UNP P23370 RS6_THETH 1 98 DBREF 1EKC B 1 88 UNP P80378 RS15_THETH 1 88 DBREF 1EKC G 1 88 UNP P80378 RS15_THETH 1 88 DBREF 1EKC C 1 88 GB 6739549 AAF27297 1 88 DBREF 1EKC H 1 88 GB 6739549 AAF27297 1 88 SEQADV 1EKC GLU B 80 UNP P80378 ALA 80 CONFLICT SEQADV 1EKC ILE B 81 UNP P80378 LEU 81 CONFLICT SEQADV 1EKC VAL B 82 UNP P80378 ILE 82 CONFLICT SEQADV 1EKC LEU B 87 UNP P80378 ILE 87 CONFLICT SEQADV 1EKC GLU G 80 UNP P80378 ALA 80 CONFLICT SEQADV 1EKC ILE G 81 UNP P80378 LEU 81 CONFLICT SEQADV 1EKC VAL G 82 UNP P80378 ILE 82 CONFLICT SEQADV 1EKC LEU G 87 UNP P80378 ILE 87 CONFLICT SEQRES 1 A 98 MET ARG ARG TYR GLU VAL ASN ILE VAL LEU ASN PRO ASN SEQRES 2 A 98 LEU ASP GLN SER GLN LEU ALA LEU GLU LYS GLU ILE ILE SEQRES 3 A 98 GLN ARG ALA LEU GLU ASN TYR GLY ALA ARG VAL GLU LYS SEQRES 4 A 98 VAL GLU GLU LEU GLY LEU ARG ARG LEU ALA TYR PRO ILE SEQRES 5 A 98 ALA LYS ASP PRO GLN GLY TYR PHE LEU TRP TYR GLN VAL SEQRES 6 A 98 GLU MET PRO GLU ASP ARG VAL ASN ASP LEU ALA ARG GLU SEQRES 7 A 98 LEU ARG ILE ARG ASP ASN VAL ARG ARG VAL MET VAL VAL SEQRES 8 A 98 LYS SER GLN GLU PRO PHE LEU SEQRES 1 B 89 MET PRO ILE THR LYS GLU GLU LYS GLN LYS VAL ILE GLN SEQRES 2 B 89 GLU PHE ALA ARG PHE PRO GLY ASP THR GLY SER THR GLU SEQRES 3 B 89 VAL GLN VAL ALA LEU LEU THR LEU ARG ILE ASN ARG LEU SEQRES 4 B 89 SER GLU HIS LEU LYS VAL HIS LYS LYS ASP HIS HIS SER SEQRES 5 B 89 HIS ARG GLY LEU LEU MET MET VAL GLY GLN ARG ARG ARG SEQRES 6 B 89 LEU LEU ARG TYR LEU GLN ARG GLU ASP PRO GLU ARG TYR SEQRES 7 B 89 ARG GLU ILE VAL GLU LYS LEU GLY LEU ARG GLY SEQRES 1 C 88 MET SER THR LYS ASN ALA LYS PRO LYS LYS GLU ALA GLN SEQRES 2 C 88 ARG ARG PRO SER ARG LYS ALA LYS VAL LYS ALA THR LEU SEQRES 3 C 88 GLY GLU PHE ASP LEU ARG ASP TYR ARG ASN VAL GLU VAL SEQRES 4 C 88 LEU LYS ARG PHE LEU SER GLU THR GLY LYS ILE LEU PRO SEQRES 5 C 88 ARG ARG ARG THR GLY LEU SER GLY LYS GLU GLN ARG ILE SEQRES 6 C 88 LEU ALA LYS THR ILE LYS ARG ALA ARG ILE LEU GLY LEU SEQRES 7 C 88 LEU PRO PHE THR GLU LYS LEU VAL ARG LYS SEQRES 1 D 41 A A G G C G G C C G A A A SEQRES 2 D 41 G G C U A G A C G G U G G SEQRES 3 D 41 G A G A G G G U G G U G G SEQRES 4 D 41 A A SEQRES 1 E 44 A C G C C G A U G G C G A SEQRES 2 E 44 A G G C A G C C A C C U G SEQRES 3 E 44 G U C C A C C C G U G A C SEQRES 4 E 44 G C U U U SEQRES 1 F 98 MET ARG ARG TYR GLU VAL ASN ILE VAL LEU ASN PRO ASN SEQRES 2 F 98 LEU ASP GLN SER GLN LEU ALA LEU GLU LYS GLU ILE ILE SEQRES 3 F 98 GLN ARG ALA LEU GLU ASN TYR GLY ALA ARG VAL GLU LYS SEQRES 4 F 98 VAL GLU GLU LEU GLY LEU ARG ARG LEU ALA TYR PRO ILE SEQRES 5 F 98 ALA LYS ASP PRO GLN GLY TYR PHE LEU TRP TYR GLN VAL SEQRES 6 F 98 GLU MET PRO GLU ASP ARG VAL ASN ASP LEU ALA ARG GLU SEQRES 7 F 98 LEU ARG ILE ARG ASP ASN VAL ARG ARG VAL MET VAL VAL SEQRES 8 F 98 LYS SER GLN GLU PRO PHE LEU SEQRES 1 G 89 MET PRO ILE THR LYS GLU GLU LYS GLN LYS VAL ILE GLN SEQRES 2 G 89 GLU PHE ALA ARG PHE PRO GLY ASP THR GLY SER THR GLU SEQRES 3 G 89 VAL GLN VAL ALA LEU LEU THR LEU ARG ILE ASN ARG LEU SEQRES 4 G 89 SER GLU HIS LEU LYS VAL HIS LYS LYS ASP HIS HIS SER SEQRES 5 G 89 HIS ARG GLY LEU LEU MET MET VAL GLY GLN ARG ARG ARG SEQRES 6 G 89 LEU LEU ARG TYR LEU GLN ARG GLU ASP PRO GLU ARG TYR SEQRES 7 G 89 ARG GLU ILE VAL GLU LYS LEU GLY LEU ARG GLY SEQRES 1 H 88 MET SER THR LYS ASN ALA LYS PRO LYS LYS GLU ALA GLN SEQRES 2 H 88 ARG ARG PRO SER ARG LYS ALA LYS VAL LYS ALA THR LEU SEQRES 3 H 88 GLY GLU PHE ASP LEU ARG ASP TYR ARG ASN VAL GLU VAL SEQRES 4 H 88 LEU LYS ARG PHE LEU SER GLU THR GLY LYS ILE LEU PRO SEQRES 5 H 88 ARG ARG ARG THR GLY LEU SER GLY LYS GLU GLN ARG ILE SEQRES 6 H 88 LEU ALA LYS THR ILE LYS ARG ALA ARG ILE LEU GLY LEU SEQRES 7 H 88 LEU PRO PHE THR GLU LYS LEU VAL ARG LYS SEQRES 1 I 41 A A G G C G G C C G A A A SEQRES 2 I 41 G G C U A G A C G G U G G SEQRES 3 I 41 G A G A G G G U G G U G G SEQRES 4 I 41 A A SEQRES 1 J 44 A C G C C G A U G G C G A SEQRES 2 J 44 A G G C A G C C A C C U G SEQRES 3 J 44 G U C C A C C C G U G A C SEQRES 4 J 44 G C U U U HELIX 1 1 ASP A 15 TYR A 33 1 19 HELIX 2 2 PRO A 68 ASP A 70 5 3 HELIX 3 3 ARG A 71 ILE A 81 1 11 HELIX 4 4 THR B 3 ALA B 15 1 13 HELIX 5 5 SER B 23 VAL B 44 1 22 HELIX 6 6 ASP B 48 ASP B 73 1 26 HELIX 7 7 ASP B 73 LEU B 84 1 12 HELIX 8 8 ARG C 64 LEU C 78 1 15 HELIX 9 9 ASP F 15 TYR F 33 1 19 HELIX 10 10 PRO F 68 ASP F 70 5 3 HELIX 11 11 ARG F 71 ARG F 82 1 12 HELIX 12 12 GLU G 5 ALA G 15 1 11 HELIX 13 13 SER G 23 LYS G 43 1 21 HELIX 14 14 ASP G 48 ASP G 73 1 26 HELIX 15 15 ASP G 73 LEU G 84 1 12 HELIX 16 16 ARG H 64 ILE H 75 1 12 SHEET 1 A 4 ARG A 36 LYS A 39 0 SHEET 2 A 4 GLN A 64 MET A 67 -1 O GLN A 64 N GLU A 38 SHEET 3 A 4 ARG A 2 GLU A 5 -1 O ARG A 2 N MET A 67 SHEET 4 A 4 VAL A 91 LYS A 92 -1 O VAL A 91 N GLU A 5 SHEET 1 B 4 GLY A 44 ARG A 46 0 SHEET 2 B 4 GLY A 58 PHE A 60 -1 N GLY A 58 O ARG A 46 SHEET 3 B 4 ILE A 8 LEU A 10 -1 N LEU A 10 O TYR A 59 SHEET 4 B 4 VAL A 85 VAL A 88 -1 N ARG A 86 O VAL A 9 SHEET 1 C 4 ARG F 36 LEU F 45 0 SHEET 2 C 4 TYR F 59 MET F 67 -1 O PHE F 60 N GLY F 44 SHEET 3 C 4 ARG F 2 LEU F 10 -1 N ARG F 2 O MET F 67 SHEET 4 C 4 VAL F 85 LYS F 92 -1 N ARG F 86 O VAL F 9 CRYST1 169.500 169.500 113.800 90.00 90.00 120.00 P 65 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005900 0.003406 0.000000 0.00000 SCALE2 0.000000 0.006812 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008787 0.00000