data_1EKG # _entry.id 1EKG # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.292 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1EKG RCSB RCSB010673 WWPDB D_1000010673 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1EKG _pdbx_database_status.recvd_initial_deposition_date 2000-03-08 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Dhe-Paganon, S.' 1 'Shigeta, R.' 2 'Chi, Y.I.' 3 'Ristow, M.' 4 'Shoelson, S.E.' 5 # _citation.id primary _citation.title 'Crystal structure of human frataxin.' _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 275 _citation.page_first 30753 _citation.page_last 30756 _citation.year 2000 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 10900192 _citation.pdbx_database_id_DOI 10.1074/jbc.C000407200 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Dhe-Paganon, S.' 1 primary 'Shigeta, R.' 2 primary 'Chi, Y.I.' 3 primary 'Ristow, M.' 4 primary 'Shoelson, S.E.' 5 # _cell.entry_id 1EKG _cell.length_a 44.050 _cell.length_b 45.220 _cell.length_c 68.950 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1EKG _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man FRATAXIN 14045.492 1 ? ? 'RESIDUES 88-210' ? 2 water nat water 18.015 81 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSHMGSLDETTYERLAEETLDSLAEFFEDLADKPYTFEDYDVSFGSGVLTVKLGGDLGTYVINKQTPNKQIWLSSPSSGP KRYDWTGKNWVYSHDGVSLHELLAAELTKALKTKLDLSSLAYSGKDA ; _entity_poly.pdbx_seq_one_letter_code_can ;GSHMGSLDETTYERLAEETLDSLAEFFEDLADKPYTFEDYDVSFGSGVLTVKLGGDLGTYVINKQTPNKQIWLSSPSSGP KRYDWTGKNWVYSHDGVSLHELLAAELTKALKTKLDLSSLAYSGKDA ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 MET n 1 5 GLY n 1 6 SER n 1 7 LEU n 1 8 ASP n 1 9 GLU n 1 10 THR n 1 11 THR n 1 12 TYR n 1 13 GLU n 1 14 ARG n 1 15 LEU n 1 16 ALA n 1 17 GLU n 1 18 GLU n 1 19 THR n 1 20 LEU n 1 21 ASP n 1 22 SER n 1 23 LEU n 1 24 ALA n 1 25 GLU n 1 26 PHE n 1 27 PHE n 1 28 GLU n 1 29 ASP n 1 30 LEU n 1 31 ALA n 1 32 ASP n 1 33 LYS n 1 34 PRO n 1 35 TYR n 1 36 THR n 1 37 PHE n 1 38 GLU n 1 39 ASP n 1 40 TYR n 1 41 ASP n 1 42 VAL n 1 43 SER n 1 44 PHE n 1 45 GLY n 1 46 SER n 1 47 GLY n 1 48 VAL n 1 49 LEU n 1 50 THR n 1 51 VAL n 1 52 LYS n 1 53 LEU n 1 54 GLY n 1 55 GLY n 1 56 ASP n 1 57 LEU n 1 58 GLY n 1 59 THR n 1 60 TYR n 1 61 VAL n 1 62 ILE n 1 63 ASN n 1 64 LYS n 1 65 GLN n 1 66 THR n 1 67 PRO n 1 68 ASN n 1 69 LYS n 1 70 GLN n 1 71 ILE n 1 72 TRP n 1 73 LEU n 1 74 SER n 1 75 SER n 1 76 PRO n 1 77 SER n 1 78 SER n 1 79 GLY n 1 80 PRO n 1 81 LYS n 1 82 ARG n 1 83 TYR n 1 84 ASP n 1 85 TRP n 1 86 THR n 1 87 GLY n 1 88 LYS n 1 89 ASN n 1 90 TRP n 1 91 VAL n 1 92 TYR n 1 93 SER n 1 94 HIS n 1 95 ASP n 1 96 GLY n 1 97 VAL n 1 98 SER n 1 99 LEU n 1 100 HIS n 1 101 GLU n 1 102 LEU n 1 103 LEU n 1 104 ALA n 1 105 ALA n 1 106 GLU n 1 107 LEU n 1 108 THR n 1 109 LYS n 1 110 ALA n 1 111 LEU n 1 112 LYS n 1 113 THR n 1 114 LYS n 1 115 LEU n 1 116 ASP n 1 117 LEU n 1 118 SER n 1 119 SER n 1 120 LEU n 1 121 ALA n 1 122 TYR n 1 123 SER n 1 124 GLY n 1 125 LYS n 1 126 ASP n 1 127 ALA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PET28A _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_code FRDA_HUMAN _struct_ref.db_name UNP _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession Q16595 _struct_ref.pdbx_align_begin 84 _struct_ref.pdbx_seq_one_letter_code ;LGHPGSLDETTYERLAEETLDSLAEFFEDLADKPYTFEDYDVSFGSGVLTVKLGGDLGTYVINKQTPNKQIWLSSPSSGP KRYDWTGKNWVYSHDGVSLHELLAAELTKALKTKLDLSSLAYSGKDA ; _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1EKG _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 127 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q16595 _struct_ref_seq.db_align_beg 84 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 210 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 84 _struct_ref_seq.pdbx_auth_seq_align_end 210 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1EKG GLY A 1 ? UNP Q16595 LEU 84 CONFLICT 84 1 1 1EKG SER A 2 ? UNP Q16595 GLY 85 CONFLICT 85 2 1 1EKG MET A 4 ? UNP Q16595 PRO 87 CONFLICT 87 3 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1EKG _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 49.67 _exptl_crystal.density_Matthews 2.44 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.temp 291.0 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details '2.5 M ammonium sulfate, 0.1 sodium citrate, 2% sucrose, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 18K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 298 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'AREA DETECTOR' _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2000-03-02 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.54 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RU200' _diffrn_source.pdbx_wavelength 1.54 _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1EKG _reflns.observed_criterion_sigma_I 1 _reflns.observed_criterion_sigma_F 1 _reflns.d_resolution_low 10 _reflns.d_resolution_high 1.80 _reflns.number_obs 65773 _reflns.number_all 12410 _reflns.percent_possible_obs 93.7 _reflns.pdbx_Rmerge_I_obs 0.0990000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 27.7 _reflns.B_iso_Wilson_estimate 15.8 _reflns.pdbx_redundancy 23.6 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.80 _reflns_shell.d_res_low 1.86 _reflns_shell.percent_possible_obs ? _reflns_shell.percent_possible_all 83.9 _reflns_shell.Rmerge_I_obs 0.2880000 _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_redundancy 3.5 _reflns_shell.number_unique_all 1090 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1EKG _refine.ls_number_reflns_obs 12410 _refine.ls_number_reflns_all 13254 _refine.pdbx_ls_sigma_I 0.0 _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_d_res_low 20 _refine.ls_d_res_high 1.80 _refine.ls_percent_reflns_obs 93.6 _refine.ls_R_factor_obs 0.1970000 _refine.ls_R_factor_all 0.1970000 _refine.ls_R_factor_R_work 0.1970000 _refine.ls_R_factor_R_free 0.2200000 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free 629 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 940 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 81 _refine_hist.number_atoms_total 1021 _refine_hist.d_res_high 1.80 _refine_hist.d_res_low 20 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.005 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 1.2 ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d 23.4 ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d 0.71 ? ? ? 'X-RAY DIFFRACTION' ? # _struct.entry_id 1EKG _struct.title 'MATURE HUMAN FRATAXIN' _struct.pdbx_descriptor FRATAXIN _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1EKG _struct_keywords.pdbx_keywords 'METAL TRANSPORT' _struct_keywords.text ;Freidreich's ataxia, iron transport, mitochondrial, disease, METAL TRANSPORT ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 8 ? ALA A 31 ? ASP A 91 ALA A 114 1 ? 24 HELX_P HELX_P2 2 SER A 98 ? LYS A 112 ? SER A 181 LYS A 195 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 6 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ASP A 41 ? GLY A 45 ? ASP A 124 GLY A 128 A 2 VAL A 48 ? LYS A 52 ? VAL A 131 LYS A 135 A 3 THR A 59 ? GLN A 65 ? THR A 142 GLN A 148 A 4 GLN A 70 ? SER A 75 ? GLN A 153 SER A 158 A 5 GLY A 79 ? TRP A 85 ? GLY A 162 TRP A 168 A 6 TRP A 90 ? TYR A 92 ? TRP A 173 TYR A 175 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O GLY A 45 ? O GLY A 128 N VAL A 48 ? N VAL A 131 A 2 3 N VAL A 51 ? N VAL A 134 O TYR A 60 ? O TYR A 143 A 3 4 N GLN A 65 ? N GLN A 148 O GLN A 70 ? O GLN A 153 A 4 5 N SER A 75 ? N SER A 158 O GLY A 79 ? O GLY A 162 A 5 6 O ASP A 84 ? O ASP A 167 N VAL A 91 ? N VAL A 174 # _database_PDB_matrix.entry_id 1EKG _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1EKG _atom_sites.fract_transf_matrix[1][1] 0.022701 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.022114 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014503 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 84 ? ? ? A . n A 1 2 SER 2 85 ? ? ? A . n A 1 3 HIS 3 86 ? ? ? A . n A 1 4 MET 4 87 ? ? ? A . n A 1 5 GLY 5 88 ? ? ? A . n A 1 6 SER 6 89 ? ? ? A . n A 1 7 LEU 7 90 90 LEU LEU A . n A 1 8 ASP 8 91 91 ASP ASP A . n A 1 9 GLU 9 92 92 GLU GLU A . n A 1 10 THR 10 93 93 THR THR A . n A 1 11 THR 11 94 94 THR THR A . n A 1 12 TYR 12 95 95 TYR TYR A . n A 1 13 GLU 13 96 96 GLU GLU A . n A 1 14 ARG 14 97 97 ARG ARG A . n A 1 15 LEU 15 98 98 LEU LEU A . n A 1 16 ALA 16 99 99 ALA ALA A . n A 1 17 GLU 17 100 100 GLU GLU A . n A 1 18 GLU 18 101 101 GLU GLU A . n A 1 19 THR 19 102 102 THR THR A . n A 1 20 LEU 20 103 103 LEU LEU A . n A 1 21 ASP 21 104 104 ASP ASP A . n A 1 22 SER 22 105 105 SER SER A . n A 1 23 LEU 23 106 106 LEU LEU A . n A 1 24 ALA 24 107 107 ALA ALA A . n A 1 25 GLU 25 108 108 GLU GLU A . n A 1 26 PHE 26 109 109 PHE PHE A . n A 1 27 PHE 27 110 110 PHE PHE A . n A 1 28 GLU 28 111 111 GLU GLU A . n A 1 29 ASP 29 112 112 ASP ASP A . n A 1 30 LEU 30 113 113 LEU LEU A . n A 1 31 ALA 31 114 114 ALA ALA A . n A 1 32 ASP 32 115 115 ASP ASP A . n A 1 33 LYS 33 116 116 LYS LYS A . n A 1 34 PRO 34 117 117 PRO PRO A . n A 1 35 TYR 35 118 118 TYR TYR A . n A 1 36 THR 36 119 119 THR THR A . n A 1 37 PHE 37 120 120 PHE PHE A . n A 1 38 GLU 38 121 121 GLU GLU A . n A 1 39 ASP 39 122 122 ASP ASP A . n A 1 40 TYR 40 123 123 TYR TYR A . n A 1 41 ASP 41 124 124 ASP ASP A . n A 1 42 VAL 42 125 125 VAL VAL A . n A 1 43 SER 43 126 126 SER SER A . n A 1 44 PHE 44 127 127 PHE PHE A . n A 1 45 GLY 45 128 128 GLY GLY A . n A 1 46 SER 46 129 129 SER SER A . n A 1 47 GLY 47 130 130 GLY GLY A . n A 1 48 VAL 48 131 131 VAL VAL A . n A 1 49 LEU 49 132 132 LEU LEU A . n A 1 50 THR 50 133 133 THR THR A . n A 1 51 VAL 51 134 134 VAL VAL A . n A 1 52 LYS 52 135 135 LYS LYS A . n A 1 53 LEU 53 136 136 LEU LEU A . n A 1 54 GLY 54 137 137 GLY GLY A . n A 1 55 GLY 55 138 138 GLY GLY A . n A 1 56 ASP 56 139 139 ASP ASP A . n A 1 57 LEU 57 140 140 LEU LEU A . n A 1 58 GLY 58 141 141 GLY GLY A . n A 1 59 THR 59 142 142 THR THR A . n A 1 60 TYR 60 143 143 TYR TYR A . n A 1 61 VAL 61 144 144 VAL VAL A . n A 1 62 ILE 62 145 145 ILE ILE A . n A 1 63 ASN 63 146 146 ASN ASN A . n A 1 64 LYS 64 147 147 LYS LYS A . n A 1 65 GLN 65 148 148 GLN GLN A . n A 1 66 THR 66 149 149 THR THR A . n A 1 67 PRO 67 150 150 PRO PRO A . n A 1 68 ASN 68 151 151 ASN ASN A . n A 1 69 LYS 69 152 152 LYS LYS A . n A 1 70 GLN 70 153 153 GLN GLN A . n A 1 71 ILE 71 154 154 ILE ILE A . n A 1 72 TRP 72 155 155 TRP TRP A . n A 1 73 LEU 73 156 156 LEU LEU A . n A 1 74 SER 74 157 157 SER SER A . n A 1 75 SER 75 158 158 SER SER A . n A 1 76 PRO 76 159 159 PRO PRO A . n A 1 77 SER 77 160 160 SER SER A . n A 1 78 SER 78 161 161 SER SER A . n A 1 79 GLY 79 162 162 GLY GLY A . n A 1 80 PRO 80 163 163 PRO PRO A . n A 1 81 LYS 81 164 164 LYS LYS A . n A 1 82 ARG 82 165 165 ARG ARG A . n A 1 83 TYR 83 166 166 TYR TYR A . n A 1 84 ASP 84 167 167 ASP ASP A . n A 1 85 TRP 85 168 168 TRP TRP A . n A 1 86 THR 86 169 169 THR THR A . n A 1 87 GLY 87 170 170 GLY GLY A . n A 1 88 LYS 88 171 171 LYS LYS A . n A 1 89 ASN 89 172 172 ASN ASN A . n A 1 90 TRP 90 173 173 TRP TRP A . n A 1 91 VAL 91 174 174 VAL VAL A . n A 1 92 TYR 92 175 175 TYR TYR A . n A 1 93 SER 93 176 176 SER SER A . n A 1 94 HIS 94 177 177 HIS HIS A . n A 1 95 ASP 95 178 178 ASP ASP A . n A 1 96 GLY 96 179 179 GLY GLY A . n A 1 97 VAL 97 180 180 VAL VAL A . n A 1 98 SER 98 181 181 SER SER A . n A 1 99 LEU 99 182 182 LEU LEU A . n A 1 100 HIS 100 183 183 HIS HIS A . n A 1 101 GLU 101 184 184 GLU GLU A . n A 1 102 LEU 102 185 185 LEU LEU A . n A 1 103 LEU 103 186 186 LEU LEU A . n A 1 104 ALA 104 187 187 ALA ALA A . n A 1 105 ALA 105 188 188 ALA ALA A . n A 1 106 GLU 106 189 189 GLU GLU A . n A 1 107 LEU 107 190 190 LEU LEU A . n A 1 108 THR 108 191 191 THR THR A . n A 1 109 LYS 109 192 192 LYS LYS A . n A 1 110 ALA 110 193 193 ALA ALA A . n A 1 111 LEU 111 194 194 LEU LEU A . n A 1 112 LYS 112 195 195 LYS LYS A . n A 1 113 THR 113 196 196 THR THR A . n A 1 114 LYS 114 197 197 LYS LYS A . n A 1 115 LEU 115 198 198 LEU LEU A . n A 1 116 ASP 116 199 199 ASP ASP A . n A 1 117 LEU 117 200 200 LEU LEU A . n A 1 118 SER 118 201 201 SER SER A . n A 1 119 SER 119 202 202 SER SER A . n A 1 120 LEU 120 203 203 LEU LEU A . n A 1 121 ALA 121 204 204 ALA ALA A . n A 1 122 TYR 122 205 205 TYR TYR A . n A 1 123 SER 123 206 206 SER SER A . n A 1 124 GLY 124 207 207 GLY GLY A . n A 1 125 LYS 125 208 208 LYS LYS A . n A 1 126 ASP 126 209 ? ? ? A . n A 1 127 ALA 127 210 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 1 1 HOH TIP A . B 2 HOH 2 2 2 HOH TIP A . B 2 HOH 3 3 3 HOH TIP A . B 2 HOH 4 4 4 HOH TIP A . B 2 HOH 5 5 5 HOH TIP A . B 2 HOH 6 6 6 HOH TIP A . B 2 HOH 7 7 7 HOH TIP A . B 2 HOH 8 8 8 HOH TIP A . B 2 HOH 9 9 9 HOH TIP A . B 2 HOH 10 10 10 HOH TIP A . B 2 HOH 11 11 11 HOH TIP A . B 2 HOH 12 12 12 HOH TIP A . B 2 HOH 13 13 13 HOH TIP A . B 2 HOH 14 14 14 HOH TIP A . B 2 HOH 15 15 15 HOH TIP A . B 2 HOH 16 16 16 HOH TIP A . B 2 HOH 17 17 17 HOH TIP A . B 2 HOH 18 18 18 HOH TIP A . B 2 HOH 19 19 19 HOH TIP A . B 2 HOH 20 20 20 HOH TIP A . B 2 HOH 21 21 21 HOH TIP A . B 2 HOH 22 22 22 HOH TIP A . B 2 HOH 23 23 23 HOH TIP A . B 2 HOH 24 24 24 HOH TIP A . B 2 HOH 25 25 25 HOH TIP A . B 2 HOH 26 26 26 HOH TIP A . B 2 HOH 27 27 27 HOH TIP A . B 2 HOH 28 28 28 HOH TIP A . B 2 HOH 29 29 29 HOH TIP A . B 2 HOH 30 30 30 HOH TIP A . B 2 HOH 31 31 31 HOH TIP A . B 2 HOH 32 32 32 HOH TIP A . B 2 HOH 33 33 33 HOH TIP A . B 2 HOH 34 34 34 HOH TIP A . B 2 HOH 35 35 35 HOH TIP A . B 2 HOH 36 36 36 HOH TIP A . B 2 HOH 37 37 37 HOH TIP A . B 2 HOH 38 38 38 HOH TIP A . B 2 HOH 39 39 39 HOH TIP A . B 2 HOH 40 40 40 HOH TIP A . B 2 HOH 41 41 41 HOH TIP A . B 2 HOH 42 42 42 HOH TIP A . B 2 HOH 43 43 43 HOH TIP A . B 2 HOH 44 44 44 HOH TIP A . B 2 HOH 45 45 45 HOH TIP A . B 2 HOH 46 46 46 HOH TIP A . B 2 HOH 47 47 47 HOH TIP A . B 2 HOH 48 48 48 HOH TIP A . B 2 HOH 49 49 49 HOH TIP A . B 2 HOH 50 50 50 HOH TIP A . B 2 HOH 51 51 51 HOH TIP A . B 2 HOH 52 52 52 HOH TIP A . B 2 HOH 53 53 53 HOH TIP A . B 2 HOH 54 54 54 HOH TIP A . B 2 HOH 55 55 55 HOH TIP A . B 2 HOH 56 56 56 HOH TIP A . B 2 HOH 57 57 57 HOH TIP A . B 2 HOH 58 58 58 HOH TIP A . B 2 HOH 59 59 59 HOH TIP A . B 2 HOH 60 60 60 HOH TIP A . B 2 HOH 61 61 61 HOH TIP A . B 2 HOH 62 62 62 HOH TIP A . B 2 HOH 63 63 63 HOH TIP A . B 2 HOH 64 64 64 HOH TIP A . B 2 HOH 65 65 65 HOH TIP A . B 2 HOH 66 66 66 HOH TIP A . B 2 HOH 67 67 67 HOH TIP A . B 2 HOH 68 68 68 HOH TIP A . B 2 HOH 69 69 69 HOH TIP A . B 2 HOH 70 70 70 HOH TIP A . B 2 HOH 71 71 71 HOH TIP A . B 2 HOH 72 72 72 HOH TIP A . B 2 HOH 73 73 73 HOH TIP A . B 2 HOH 74 74 74 HOH TIP A . B 2 HOH 75 75 75 HOH TIP A . B 2 HOH 76 76 76 HOH TIP A . B 2 HOH 77 77 77 HOH TIP A . B 2 HOH 78 78 78 HOH TIP A . B 2 HOH 79 79 79 HOH TIP A . B 2 HOH 80 80 80 HOH TIP A . B 2 HOH 81 81 81 HOH TIP A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2000-11-08 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2018-01-31 5 'Structure model' 1 4 2018-04-04 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Experimental preparation' 4 5 'Structure model' 'Data collection' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' exptl_crystal_grow 2 5 'Structure model' diffrn_source # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_exptl_crystal_grow.pdbx_details' 2 4 'Structure model' '_exptl_crystal_grow.temp' 3 5 'Structure model' '_diffrn_source.type' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal SHARP phasing . ? 1 CNS refinement . ? 2 DENZO 'data reduction' . ? 3 SCALEPACK 'data scaling' . ? 4 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 139 ? ? 48.81 17.00 2 1 LYS A 171 ? ? -145.38 -20.60 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 84 ? A GLY 1 2 1 Y 1 A SER 85 ? A SER 2 3 1 Y 1 A HIS 86 ? A HIS 3 4 1 Y 1 A MET 87 ? A MET 4 5 1 Y 1 A GLY 88 ? A GLY 5 6 1 Y 1 A SER 89 ? A SER 6 7 1 Y 1 A ASP 209 ? A ASP 126 8 1 Y 1 A ALA 210 ? A ALA 127 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #