data_1EMI # _entry.id 1EMI # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.385 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1EMI pdb_00001emi 10.2210/pdb1emi/pdb NDB RR0008 ? ? RCSB RCSB010724 ? ? WWPDB D_1000010724 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2000-06-12 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-02-07 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1EMI _pdbx_database_status.recvd_initial_deposition_date 2000-03-16 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 486D _pdbx_database_related.details 'X-ray crystal structures of 70S ribosome functional complexes' _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Lancaster, L.' 1 'Culver, G.M.' 2 'Yusupova, G.Z.' 3 'Cate, J.H.' 4 'Yuspov, M.M.' 5 'Noller, H.F.' 6 # _citation.id primary _citation.title ;The location of protein S8 and surrounding elements of 16S rRNA in the 70S ribosome from combined use of directed hydroxyl radical probing and X-ray crystallography. ; _citation.journal_abbrev RNA _citation.journal_volume 6 _citation.page_first 717 _citation.page_last 729 _citation.year 2000 _citation.journal_id_ASTM RNARFU _citation.country UK _citation.journal_id_ISSN 1355-8382 _citation.journal_id_CSD 2122 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 10836793 _citation.pdbx_database_id_DOI 10.1017/S1355838200000303 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Lancaster, L.' 1 ? primary 'Culver, G.M.' 2 ? primary 'Yusupova, G.Z.' 3 ? primary 'Cate, J.H.' 4 ? primary 'Yusupov, M.M.' 5 ? primary 'Noller, H.F.' 6 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat '16S RIBOSOMAL RNA' 51921.684 1 ? ? ? 'COORDINATES FOR THERMUS THERMOPHILUS 16S RRNA BUT SEQUENCE AND NUMBERING IS THAT OF E.COLI 16S RRNA' 2 polymer nat 'RIBOSOMAL PROTEIN S8' 15624.214 1 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polyribonucleotide no no ;GCACGCAGGCGGUUUGUUAAGUCAGAUGUGAAAUCCCCGGGCUCAACCUGGGAACUGCAUCUGAUACUGGCAAGCUUGAG UCUCGUACGAAGACUGACGCUCAGGUGCGUCGACUUGGAGGUUGUGCUUCGUGGCUUCCGGAGCUAACGCGUUAAGUCGA C ; ;GCACGCAGGCGGUUUGUUAAGUCAGAUGUGAAAUCCCCGGGCUCAACCUGGGAACUGCAUCUGAUACUGGCAAGCUUGAG UCUCGUACGAAGACUGACGCUCAGGUGCGUCGACUUGGAGGUUGUGCUUCGUGGCUUCCGGAGCUAACGCGUUAAGUCGA C ; B ? 2 'polypeptide(L)' no no ;TDPIADMLTRIRNATRVYKESTDVPASRFKEEILRILAREGFIKGYERVDVDGKPYLRVYLKYGPRRQGPDPRPEQVIHH IRRISKPGRRVYVGVKEIPRVRRGLGIAILSTSKGVLTDREARKLGVGGELICEVW ; ;TDPIADMLTRIRNATRVYKESTDVPASRFKEEILRILAREGFIKGYERVDVDGKPYLRVYLKYGPRRQGPDPRPEQVIHH IRRISKPGRRVYVGVKEIPRVRRGLGIAILSTSKGVLTDREARKLGVGGELICEVW ; A ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 C n 1 3 A n 1 4 C n 1 5 G n 1 6 C n 1 7 A n 1 8 G n 1 9 G n 1 10 C n 1 11 G n 1 12 G n 1 13 U n 1 14 U n 1 15 U n 1 16 G n 1 17 U n 1 18 U n 1 19 A n 1 20 A n 1 21 G n 1 22 U n 1 23 C n 1 24 A n 1 25 G n 1 26 A n 1 27 U n 1 28 G n 1 29 U n 1 30 G n 1 31 A n 1 32 A n 1 33 A n 1 34 U n 1 35 C n 1 36 C n 1 37 C n 1 38 C n 1 39 G n 1 40 G n 1 41 G n 1 42 C n 1 43 U n 1 44 C n 1 45 A n 1 46 A n 1 47 C n 1 48 C n 1 49 U n 1 50 G n 1 51 G n 1 52 G n 1 53 A n 1 54 A n 1 55 C n 1 56 U n 1 57 G n 1 58 C n 1 59 A n 1 60 U n 1 61 C n 1 62 U n 1 63 G n 1 64 A n 1 65 U n 1 66 A n 1 67 C n 1 68 U n 1 69 G n 1 70 G n 1 71 C n 1 72 A n 1 73 A n 1 74 G n 1 75 C n 1 76 U n 1 77 U n 1 78 G n 1 79 A n 1 80 G n 1 81 U n 1 82 C n 1 83 U n 1 84 C n 1 85 G n 1 86 U n 1 87 A n 1 88 C n 1 89 G n 1 90 A n 1 91 A n 1 92 G n 1 93 A n 1 94 C n 1 95 U n 1 96 G n 1 97 A n 1 98 C n 1 99 G n 1 100 C n 1 101 U n 1 102 C n 1 103 A n 1 104 G n 1 105 G n 1 106 U n 1 107 G n 1 108 C n 1 109 G n 1 110 U n 1 111 C n 1 112 G n 1 113 A n 1 114 C n 1 115 U n 1 116 U n 1 117 G n 1 118 G n 1 119 A n 1 120 G n 1 121 G n 1 122 U n 1 123 U n 1 124 G n 1 125 U n 1 126 G n 1 127 C n 1 128 U n 1 129 U n 1 130 C n 1 131 G n 1 132 U n 1 133 G n 1 134 G n 1 135 C n 1 136 U n 1 137 U n 1 138 C n 1 139 C n 1 140 G n 1 141 G n 1 142 A n 1 143 G n 1 144 C n 1 145 U n 1 146 A n 1 147 A n 1 148 C n 1 149 G n 1 150 C n 1 151 G n 1 152 U n 1 153 U n 1 154 A n 1 155 A n 1 156 G n 1 157 U n 1 158 C n 1 159 G n 1 160 A n 1 161 C n 2 1 THR n 2 2 ASP n 2 3 PRO n 2 4 ILE n 2 5 ALA n 2 6 ASP n 2 7 MET n 2 8 LEU n 2 9 THR n 2 10 ARG n 2 11 ILE n 2 12 ARG n 2 13 ASN n 2 14 ALA n 2 15 THR n 2 16 ARG n 2 17 VAL n 2 18 TYR n 2 19 LYS n 2 20 GLU n 2 21 SER n 2 22 THR n 2 23 ASP n 2 24 VAL n 2 25 PRO n 2 26 ALA n 2 27 SER n 2 28 ARG n 2 29 PHE n 2 30 LYS n 2 31 GLU n 2 32 GLU n 2 33 ILE n 2 34 LEU n 2 35 ARG n 2 36 ILE n 2 37 LEU n 2 38 ALA n 2 39 ARG n 2 40 GLU n 2 41 GLY n 2 42 PHE n 2 43 ILE n 2 44 LYS n 2 45 GLY n 2 46 TYR n 2 47 GLU n 2 48 ARG n 2 49 VAL n 2 50 ASP n 2 51 VAL n 2 52 ASP n 2 53 GLY n 2 54 LYS n 2 55 PRO n 2 56 TYR n 2 57 LEU n 2 58 ARG n 2 59 VAL n 2 60 TYR n 2 61 LEU n 2 62 LYS n 2 63 TYR n 2 64 GLY n 2 65 PRO n 2 66 ARG n 2 67 ARG n 2 68 GLN n 2 69 GLY n 2 70 PRO n 2 71 ASP n 2 72 PRO n 2 73 ARG n 2 74 PRO n 2 75 GLU n 2 76 GLN n 2 77 VAL n 2 78 ILE n 2 79 HIS n 2 80 HIS n 2 81 ILE n 2 82 ARG n 2 83 ARG n 2 84 ILE n 2 85 SER n 2 86 LYS n 2 87 PRO n 2 88 GLY n 2 89 ARG n 2 90 ARG n 2 91 VAL n 2 92 TYR n 2 93 VAL n 2 94 GLY n 2 95 VAL n 2 96 LYS n 2 97 GLU n 2 98 ILE n 2 99 PRO n 2 100 ARG n 2 101 VAL n 2 102 ARG n 2 103 ARG n 2 104 GLY n 2 105 LEU n 2 106 GLY n 2 107 ILE n 2 108 ALA n 2 109 ILE n 2 110 LEU n 2 111 SER n 2 112 THR n 2 113 SER n 2 114 LYS n 2 115 GLY n 2 116 VAL n 2 117 LEU n 2 118 THR n 2 119 ASP n 2 120 ARG n 2 121 GLU n 2 122 ALA n 2 123 ARG n 2 124 LYS n 2 125 LEU n 2 126 GLY n 2 127 VAL n 2 128 GLY n 2 129 GLY n 2 130 GLU n 2 131 LEU n 2 132 ILE n 2 133 CYS n 2 134 GLU n 2 135 VAL n 2 136 TRP n # loop_ _entity_src_nat.entity_id _entity_src_nat.pdbx_src_id _entity_src_nat.pdbx_alt_source_flag _entity_src_nat.pdbx_beg_seq_num _entity_src_nat.pdbx_end_seq_num _entity_src_nat.common_name _entity_src_nat.pdbx_organism_scientific _entity_src_nat.pdbx_ncbi_taxonomy_id _entity_src_nat.genus _entity_src_nat.species _entity_src_nat.strain _entity_src_nat.tissue _entity_src_nat.tissue_fraction _entity_src_nat.pdbx_secretion _entity_src_nat.pdbx_fragment _entity_src_nat.pdbx_variant _entity_src_nat.pdbx_cell_line _entity_src_nat.pdbx_atcc _entity_src_nat.pdbx_cellular_location _entity_src_nat.pdbx_organ _entity_src_nat.pdbx_organelle _entity_src_nat.pdbx_cell _entity_src_nat.pdbx_plasmid_name _entity_src_nat.pdbx_plasmid_details _entity_src_nat.details 1 1 sample ? ? ? 'Thermus thermophilus' 274 Thermus ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample ? ? ? 'Thermus thermophilus' 274 Thermus ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 577 577 G G B . n A 1 2 C 2 578 578 C C B . n A 1 3 A 3 579 579 A A B . n A 1 4 C 4 580 580 C C B . n A 1 5 G 5 581 581 G G B . n A 1 6 C 6 582 582 C C B . n A 1 7 A 7 583 583 A A B . n A 1 8 G 8 584 584 G G B . n A 1 9 G 9 585 585 G G B . n A 1 10 C 10 586 586 C C B . n A 1 11 G 11 587 587 G G B . n A 1 12 G 12 588 588 G G B . n A 1 13 U 13 589 589 U U B . n A 1 14 U 14 590 590 U U B . n A 1 15 U 15 591 591 U U B . n A 1 16 G 16 592 592 G G B . n A 1 17 U 17 593 593 U U B . n A 1 18 U 18 594 594 U U B . n A 1 19 A 19 595 595 A A B . n A 1 20 A 20 596 596 A A B . n A 1 21 G 21 597 597 G G B . n A 1 22 U 22 598 598 U U B . n A 1 23 C 23 599 599 C C B . n A 1 24 A 24 600 600 A A B . n A 1 25 G 25 601 601 G G B . n A 1 26 A 26 602 602 A A B . n A 1 27 U 27 603 603 U U B . n A 1 28 G 28 604 604 G G B . n A 1 29 U 29 605 605 U U B . n A 1 30 G 30 606 606 G G B . n A 1 31 A 31 607 607 A A B . n A 1 32 A 32 608 608 A A B . n A 1 33 A 33 609 609 A A B . n A 1 34 U 34 610 610 U U B . n A 1 35 C 35 611 611 C C B . n A 1 36 C 36 612 612 C C B . n A 1 37 C 37 613 613 C C B . n A 1 38 C 38 614 614 C C B . n A 1 39 G 39 615 615 G G B . n A 1 40 G 40 616 616 G G B . n A 1 41 G 41 617 617 G G B . n A 1 42 C 42 618 618 C C B . n A 1 43 U 43 619 619 U U B . n A 1 44 C 44 620 620 C C B . n A 1 45 A 45 621 621 A A B . n A 1 46 A 46 622 622 A A B . n A 1 47 C 47 623 623 C C B . n A 1 48 C 48 624 624 C C B . n A 1 49 U 49 625 625 U U B . n A 1 50 G 50 626 626 G G B . n A 1 51 G 51 627 627 G G B . n A 1 52 G 52 628 628 G G B . n A 1 53 A 53 629 629 A A B . n A 1 54 A 54 630 630 A A B . n A 1 55 C 55 631 631 C C B . n A 1 56 U 56 632 632 U U B . n A 1 57 G 57 633 633 G G B . n A 1 58 C 58 634 634 C C B . n A 1 59 A 59 635 635 A A B . n A 1 60 U 60 636 636 U U B . n A 1 61 C 61 637 637 C C B . n A 1 62 U 62 638 638 U U B . n A 1 63 G 63 639 639 G G B . n A 1 64 A 64 640 640 A A B . n A 1 65 U 65 641 641 U U B . n A 1 66 A 66 642 642 A A B . n A 1 67 C 67 643 643 C C B . n A 1 68 U 68 644 644 U U B . n A 1 69 G 69 645 645 G G B . n A 1 70 G 70 646 646 G G B . n A 1 71 C 71 647 647 C C B . n A 1 72 A 72 648 648 A A B . n A 1 73 A 73 649 649 A A B . n A 1 74 G 74 650 650 G G B . n A 1 75 C 75 651 651 C C B . n A 1 76 U 76 652 652 U U B . n A 1 77 U 77 653 653 U U B . n A 1 78 G 78 654 654 G G B . n A 1 79 A 79 655 655 A A B . n A 1 80 G 80 656 656 G G B . n A 1 81 U 81 657 657 U U B . n A 1 82 C 82 658 658 C C B . n A 1 83 U 83 659 659 U U B . n A 1 84 C 84 660 660 C C B . n A 1 85 G 85 661 661 G G B . n A 1 86 U 86 662 662 U U B . n A 1 87 A 87 743 743 A A B . n A 1 88 C 88 744 744 C C B . n A 1 89 G 89 745 745 G G B . n A 1 90 A 90 746 746 A A B . n A 1 91 A 91 747 747 A A B . n A 1 92 G 92 748 748 G G B . n A 1 93 A 93 749 749 A A B . n A 1 94 C 94 750 750 C C B . n A 1 95 U 95 751 751 U U B . n A 1 96 G 96 752 752 G G B . n A 1 97 A 97 753 753 A A B . n A 1 98 C 98 754 754 C C B . n A 1 99 G 99 755 755 G G B . n A 1 100 C 100 756 756 C C B . n A 1 101 U 101 757 757 U U B . n A 1 102 C 102 758 758 C C B . n A 1 103 A 103 759 759 A A B . n A 1 104 G 104 760 760 G G B . n A 1 105 G 105 761 761 G G B . n A 1 106 U 106 762 762 U U B . n A 1 107 G 107 763 763 G G B . n A 1 108 C 108 764 764 C C B . n A 1 109 G 109 821 821 G G B . n A 1 110 U 110 822 822 U U B . n A 1 111 C 111 823 823 C C B . n A 1 112 G 112 824 824 G G B . n A 1 113 A 113 825 825 A A B . n A 1 114 C 114 826 826 C C B . n A 1 115 U 115 827 827 U U B . n A 1 116 U 116 828 828 U U B . n A 1 117 G 117 829 829 G G B . n A 1 118 G 118 830 830 G G B . n A 1 119 A 119 831 831 A A B . n A 1 120 G 120 832 832 G G B . n A 1 121 G 121 833 833 G G B . n A 1 122 U 122 834 834 U U B . n A 1 123 U 123 835 835 U U B . n A 1 124 G 124 836 836 G G B . n A 1 125 U 125 837 837 U U B . n A 1 126 G 126 838 838 G G B . n A 1 127 C 127 841 841 C C B . n A 1 128 U 128 842 842 U U B . n A 1 129 U 129 843 843 U U B . n A 1 130 C 130 848 848 C C B . n A 1 131 G 131 849 849 G G B . n A 1 132 U 132 850 850 U U B . n A 1 133 G 133 851 851 G G B . n A 1 134 G 134 852 852 G G B . n A 1 135 C 135 853 853 C C B . n A 1 136 U 136 854 854 U U B . n A 1 137 U 137 855 855 U U B . n A 1 138 C 138 856 856 C C B . n A 1 139 C 139 857 857 C C B . n A 1 140 G 140 858 858 G G B . n A 1 141 G 141 859 859 G G B . n A 1 142 A 142 860 860 A A B . n A 1 143 G 143 861 861 G G B . n A 1 144 C 144 862 862 C C B . n A 1 145 U 145 863 863 U U B . n A 1 146 A 146 864 864 A A B . n A 1 147 A 147 865 865 A A B . n A 1 148 C 148 866 866 C C B . n A 1 149 G 149 867 867 G G B . n A 1 150 C 150 868 868 C C B . n A 1 151 G 151 869 869 G G B . n A 1 152 U 152 870 870 U U B . n A 1 153 U 153 871 871 U U B . n A 1 154 A 154 872 872 A A B . n A 1 155 A 155 873 873 A A B . n A 1 156 G 156 874 874 G G B . n A 1 157 U 157 875 875 U U B . n A 1 158 C 158 876 876 C C B . n A 1 159 G 159 877 877 G G B . n A 1 160 A 160 878 878 A A B . n A 1 161 C 161 879 879 C C B . n B 2 1 THR 1 3 3 THR THR A . n B 2 2 ASP 2 4 4 ASP ASP A . n B 2 3 PRO 3 5 5 PRO PRO A . n B 2 4 ILE 4 6 6 ILE ILE A . n B 2 5 ALA 5 7 7 ALA ALA A . n B 2 6 ASP 6 8 8 ASP ASP A . n B 2 7 MET 7 9 9 MET MET A . n B 2 8 LEU 8 10 10 LEU LEU A . n B 2 9 THR 9 11 11 THR THR A . n B 2 10 ARG 10 12 12 ARG ARG A . n B 2 11 ILE 11 13 13 ILE ILE A . n B 2 12 ARG 12 14 14 ARG ARG A . n B 2 13 ASN 13 15 15 ASN ASN A . n B 2 14 ALA 14 16 16 ALA ALA A . n B 2 15 THR 15 17 17 THR THR A . n B 2 16 ARG 16 18 18 ARG ARG A . n B 2 17 VAL 17 19 19 VAL VAL A . n B 2 18 TYR 18 20 20 TYR TYR A . n B 2 19 LYS 19 21 21 LYS LYS A . n B 2 20 GLU 20 22 22 GLU GLU A . n B 2 21 SER 21 23 23 SER SER A . n B 2 22 THR 22 24 24 THR THR A . n B 2 23 ASP 23 25 25 ASP ASP A . n B 2 24 VAL 24 26 26 VAL VAL A . n B 2 25 PRO 25 27 27 PRO PRO A . n B 2 26 ALA 26 28 28 ALA ALA A . n B 2 27 SER 27 29 29 SER SER A . n B 2 28 ARG 28 30 30 ARG ARG A . n B 2 29 PHE 29 31 31 PHE PHE A . n B 2 30 LYS 30 32 32 LYS LYS A . n B 2 31 GLU 31 33 33 GLU GLU A . n B 2 32 GLU 32 34 34 GLU GLU A . n B 2 33 ILE 33 35 35 ILE ILE A . n B 2 34 LEU 34 36 36 LEU LEU A . n B 2 35 ARG 35 37 37 ARG ARG A . n B 2 36 ILE 36 38 38 ILE ILE A . n B 2 37 LEU 37 39 39 LEU LEU A . n B 2 38 ALA 38 40 40 ALA ALA A . n B 2 39 ARG 39 41 41 ARG ARG A . n B 2 40 GLU 40 42 42 GLU GLU A . n B 2 41 GLY 41 43 43 GLY GLY A . n B 2 42 PHE 42 44 44 PHE PHE A . n B 2 43 ILE 43 45 45 ILE ILE A . n B 2 44 LYS 44 46 46 LYS LYS A . n B 2 45 GLY 45 47 47 GLY GLY A . n B 2 46 TYR 46 48 48 TYR TYR A . n B 2 47 GLU 47 49 49 GLU GLU A . n B 2 48 ARG 48 50 50 ARG ARG A . n B 2 49 VAL 49 51 51 VAL VAL A . n B 2 50 ASP 50 52 52 ASP ASP A . n B 2 51 VAL 51 53 53 VAL VAL A . n B 2 52 ASP 52 54 54 ASP ASP A . n B 2 53 GLY 53 55 55 GLY GLY A . n B 2 54 LYS 54 56 56 LYS LYS A . n B 2 55 PRO 55 57 57 PRO PRO A . n B 2 56 TYR 56 58 58 TYR TYR A . n B 2 57 LEU 57 59 59 LEU LEU A . n B 2 58 ARG 58 60 60 ARG ARG A . n B 2 59 VAL 59 61 61 VAL VAL A . n B 2 60 TYR 60 62 62 TYR TYR A . n B 2 61 LEU 61 63 63 LEU LEU A . n B 2 62 LYS 62 64 64 LYS LYS A . n B 2 63 TYR 63 65 65 TYR TYR A . n B 2 64 GLY 64 66 66 GLY GLY A . n B 2 65 PRO 65 67 67 PRO PRO A . n B 2 66 ARG 66 68 68 ARG ARG A . n B 2 67 ARG 67 69 69 ARG ARG A . n B 2 68 GLN 68 70 70 GLN GLN A . n B 2 69 GLY 69 71 71 GLY GLY A . n B 2 70 PRO 70 72 72 PRO PRO A . n B 2 71 ASP 71 73 73 ASP ASP A . n B 2 72 PRO 72 74 74 PRO PRO A . n B 2 73 ARG 73 75 75 ARG ARG A . n B 2 74 PRO 74 76 76 PRO PRO A . n B 2 75 GLU 75 77 77 GLU GLU A . n B 2 76 GLN 76 78 78 GLN GLN A . n B 2 77 VAL 77 79 79 VAL VAL A . n B 2 78 ILE 78 80 80 ILE ILE A . n B 2 79 HIS 79 81 81 HIS HIS A . n B 2 80 HIS 80 82 82 HIS HIS A . n B 2 81 ILE 81 83 83 ILE ILE A . n B 2 82 ARG 82 84 84 ARG ARG A . n B 2 83 ARG 83 85 85 ARG ARG A . n B 2 84 ILE 84 86 86 ILE ILE A . n B 2 85 SER 85 87 87 SER SER A . n B 2 86 LYS 86 88 88 LYS LYS A . n B 2 87 PRO 87 89 89 PRO PRO A . n B 2 88 GLY 88 90 90 GLY GLY A . n B 2 89 ARG 89 91 91 ARG ARG A . n B 2 90 ARG 90 92 92 ARG ARG A . n B 2 91 VAL 91 93 93 VAL VAL A . n B 2 92 TYR 92 94 94 TYR TYR A . n B 2 93 VAL 93 95 95 VAL VAL A . n B 2 94 GLY 94 96 96 GLY GLY A . n B 2 95 VAL 95 97 97 VAL VAL A . n B 2 96 LYS 96 98 98 LYS LYS A . n B 2 97 GLU 97 99 99 GLU GLU A . n B 2 98 ILE 98 100 100 ILE ILE A . n B 2 99 PRO 99 101 101 PRO PRO A . n B 2 100 ARG 100 102 102 ARG ARG A . n B 2 101 VAL 101 103 103 VAL VAL A . n B 2 102 ARG 102 104 104 ARG ARG A . n B 2 103 ARG 103 105 105 ARG ARG A . n B 2 104 GLY 104 106 106 GLY GLY A . n B 2 105 LEU 105 107 107 LEU LEU A . n B 2 106 GLY 106 108 108 GLY GLY A . n B 2 107 ILE 107 109 109 ILE ILE A . n B 2 108 ALA 108 110 110 ALA ALA A . n B 2 109 ILE 109 111 111 ILE ILE A . n B 2 110 LEU 110 112 112 LEU LEU A . n B 2 111 SER 111 113 113 SER SER A . n B 2 112 THR 112 114 114 THR THR A . n B 2 113 SER 113 115 115 SER SER A . n B 2 114 LYS 114 116 116 LYS LYS A . n B 2 115 GLY 115 117 117 GLY GLY A . n B 2 116 VAL 116 118 118 VAL VAL A . n B 2 117 LEU 117 119 119 LEU LEU A . n B 2 118 THR 118 120 120 THR THR A . n B 2 119 ASP 119 121 121 ASP ASP A . n B 2 120 ARG 120 122 122 ARG ARG A . n B 2 121 GLU 121 123 123 GLU GLU A . n B 2 122 ALA 122 124 124 ALA ALA A . n B 2 123 ARG 123 125 125 ARG ARG A . n B 2 124 LYS 124 126 126 LYS LYS A . n B 2 125 LEU 125 127 127 LEU LEU A . n B 2 126 GLY 126 128 128 GLY GLY A . n B 2 127 VAL 127 129 129 VAL VAL A . n B 2 128 GLY 128 130 130 GLY GLY A . n B 2 129 GLY 129 131 131 GLY GLY A . n B 2 130 GLU 130 132 132 GLU GLU A . n B 2 131 LEU 131 133 133 LEU LEU A . n B 2 132 ILE 132 134 134 ILE ILE A . n B 2 133 CYS 133 135 135 CYS CYS A . n B 2 134 GLU 134 136 136 GLU GLU A . n B 2 135 VAL 135 137 137 VAL VAL A . n B 2 136 TRP 136 138 138 TRP TRP A . n # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MLPHARE phasing . ? 1 CNS refinement . ? 2 DENZO 'data reduction' . ? 3 SCALEPACK 'data scaling' . ? 4 # _cell.entry_id 1EMI _cell.length_a 508 _cell.length_b 508 _cell.length_c 803 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1EMI _symmetry.space_group_name_H-M 'I 4 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting tetragonal _symmetry.Int_Tables_number 97 # _exptl.entry_id 1EMI _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 5 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol ? _exptl_crystal.density_Matthews ? _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp 105 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.1051 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type ALS _diffrn_source.pdbx_wavelength 1.1051 _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1EMI _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low ? _reflns.d_resolution_high 7.50 _reflns.number_obs ? _reflns.number_all ? _reflns.percent_possible_obs ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_k_min ? _reflns.observed_criterion_F_min ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _refine.entry_id 1EMI _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_d_res_low ? _refine.ls_d_res_high 7.50 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ;All data collection parameters are as reported for 486D. The RNA model for the S8 region of 16S rRNA was built manually by fitting to the 7.8 A X-ray map of the Thermus thermophilus 70S ribosome (Cate et al., Science 285, 2095-2104, 1999; see PDB 486D) using a single P pseudoatom for each nucleotide. Note that the nucleotide numbering corresponds to the nucleotide positions of E.coli 16S rRNA. Protein S8 from Thermus thermophilus (PDB 1AN7) was fitted to the 7.8 A map of the Thermus thermophilus 70S ribosome by splitting the protein into N- and C-terminal domains between residues 80 and 81. The two domains were fit separately, resulting in a small relative movement compared with the original X-ray structure. Only C-alpha positions are given in the PDB file. ; _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 136 _refine_hist.pdbx_number_atoms_nucleic_acid 161 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 297 _refine_hist.d_res_high 7.50 _refine_hist.d_res_low . # _database_PDB_matrix.entry_id 1EMI _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1EMI _struct.title 'STRUCTURE OF 16S RRNA IN THE REGION AROUND RIBOSOMAL PROTEIN S8.' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1EMI _struct_keywords.pdbx_keywords RIBOSOME _struct_keywords.text 'RNA, rRNA, ribosome, ribosomal protein, 16S rRNA, S8' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform _struct_ref.pdbx_seq_one_letter_code 1 UNP RS8_THET8 Q5SHQ2 2 3 ? ? 2 PDB 1EMI 1EMI 1 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1EMI A 1 ? 136 ? Q5SHQ2 3 ? 138 ? 3 138 2 2 1EMI B 1 ? 161 ? 1EMI 577 ? 879 ? 577 879 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1EMI ASP A 23 ? UNP Q5SHQ2 GLU 25 conflict 25 1 1 1EMI ARG A 35 ? UNP Q5SHQ2 LYS 37 conflict 37 2 1 1EMI ASP A 50 ? UNP Q5SHQ2 GLU 52 conflict 52 3 1 1EMI VAL A 59 ? UNP Q5SHQ2 ILE 61 conflict 61 4 1 1EMI TYR A 60 ? UNP Q5SHQ2 HIS 62 conflict 62 5 1 1EMI HIS A 79 ? UNP Q5SHQ2 LYS 81 conflict 81 6 1 1EMI LYS A 86 ? UNP Q5SHQ2 ARG 88 conflict 88 7 1 1EMI SER A 113 ? UNP Q5SHQ2 PRO 115 conflict 115 8 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 ASP N N N N 95 ASP CA C N S 96 ASP C C N N 97 ASP O O N N 98 ASP CB C N N 99 ASP CG C N N 100 ASP OD1 O N N 101 ASP OD2 O N N 102 ASP OXT O N N 103 ASP H H N N 104 ASP H2 H N N 105 ASP HA H N N 106 ASP HB2 H N N 107 ASP HB3 H N N 108 ASP HD2 H N N 109 ASP HXT H N N 110 C OP3 O N N 111 C P P N N 112 C OP1 O N N 113 C OP2 O N N 114 C "O5'" O N N 115 C "C5'" C N N 116 C "C4'" C N R 117 C "O4'" O N N 118 C "C3'" C N S 119 C "O3'" O N N 120 C "C2'" C N R 121 C "O2'" O N N 122 C "C1'" C N R 123 C N1 N N N 124 C C2 C N N 125 C O2 O N N 126 C N3 N N N 127 C C4 C N N 128 C N4 N N N 129 C C5 C N N 130 C C6 C N N 131 C HOP3 H N N 132 C HOP2 H N N 133 C "H5'" H N N 134 C "H5''" H N N 135 C "H4'" H N N 136 C "H3'" H N N 137 C "HO3'" H N N 138 C "H2'" H N N 139 C "HO2'" H N N 140 C "H1'" H N N 141 C H41 H N N 142 C H42 H N N 143 C H5 H N N 144 C H6 H N N 145 CYS N N N N 146 CYS CA C N R 147 CYS C C N N 148 CYS O O N N 149 CYS CB C N N 150 CYS SG S N N 151 CYS OXT O N N 152 CYS H H N N 153 CYS H2 H N N 154 CYS HA H N N 155 CYS HB2 H N N 156 CYS HB3 H N N 157 CYS HG H N N 158 CYS HXT H N N 159 G OP3 O N N 160 G P P N N 161 G OP1 O N N 162 G OP2 O N N 163 G "O5'" O N N 164 G "C5'" C N N 165 G "C4'" C N R 166 G "O4'" O N N 167 G "C3'" C N S 168 G "O3'" O N N 169 G "C2'" C N R 170 G "O2'" O N N 171 G "C1'" C N R 172 G N9 N Y N 173 G C8 C Y N 174 G N7 N Y N 175 G C5 C Y N 176 G C6 C N N 177 G O6 O N N 178 G N1 N N N 179 G C2 C N N 180 G N2 N N N 181 G N3 N N N 182 G C4 C Y N 183 G HOP3 H N N 184 G HOP2 H N N 185 G "H5'" H N N 186 G "H5''" H N N 187 G "H4'" H N N 188 G "H3'" H N N 189 G "HO3'" H N N 190 G "H2'" H N N 191 G "HO2'" H N N 192 G "H1'" H N N 193 G H8 H N N 194 G H1 H N N 195 G H21 H N N 196 G H22 H N N 197 GLN N N N N 198 GLN CA C N S 199 GLN C C N N 200 GLN O O N N 201 GLN CB C N N 202 GLN CG C N N 203 GLN CD C N N 204 GLN OE1 O N N 205 GLN NE2 N N N 206 GLN OXT O N N 207 GLN H H N N 208 GLN H2 H N N 209 GLN HA H N N 210 GLN HB2 H N N 211 GLN HB3 H N N 212 GLN HG2 H N N 213 GLN HG3 H N N 214 GLN HE21 H N N 215 GLN HE22 H N N 216 GLN HXT H N N 217 GLU N N N N 218 GLU CA C N S 219 GLU C C N N 220 GLU O O N N 221 GLU CB C N N 222 GLU CG C N N 223 GLU CD C N N 224 GLU OE1 O N N 225 GLU OE2 O N N 226 GLU OXT O N N 227 GLU H H N N 228 GLU H2 H N N 229 GLU HA H N N 230 GLU HB2 H N N 231 GLU HB3 H N N 232 GLU HG2 H N N 233 GLU HG3 H N N 234 GLU HE2 H N N 235 GLU HXT H N N 236 GLY N N N N 237 GLY CA C N N 238 GLY C C N N 239 GLY O O N N 240 GLY OXT O N N 241 GLY H H N N 242 GLY H2 H N N 243 GLY HA2 H N N 244 GLY HA3 H N N 245 GLY HXT H N N 246 HIS N N N N 247 HIS CA C N S 248 HIS C C N N 249 HIS O O N N 250 HIS CB C N N 251 HIS CG C Y N 252 HIS ND1 N Y N 253 HIS CD2 C Y N 254 HIS CE1 C Y N 255 HIS NE2 N Y N 256 HIS OXT O N N 257 HIS H H N N 258 HIS H2 H N N 259 HIS HA H N N 260 HIS HB2 H N N 261 HIS HB3 H N N 262 HIS HD1 H N N 263 HIS HD2 H N N 264 HIS HE1 H N N 265 HIS HE2 H N N 266 HIS HXT H N N 267 ILE N N N N 268 ILE CA C N S 269 ILE C C N N 270 ILE O O N N 271 ILE CB C N S 272 ILE CG1 C N N 273 ILE CG2 C N N 274 ILE CD1 C N N 275 ILE OXT O N N 276 ILE H H N N 277 ILE H2 H N N 278 ILE HA H N N 279 ILE HB H N N 280 ILE HG12 H N N 281 ILE HG13 H N N 282 ILE HG21 H N N 283 ILE HG22 H N N 284 ILE HG23 H N N 285 ILE HD11 H N N 286 ILE HD12 H N N 287 ILE HD13 H N N 288 ILE HXT H N N 289 LEU N N N N 290 LEU CA C N S 291 LEU C C N N 292 LEU O O N N 293 LEU CB C N N 294 LEU CG C N N 295 LEU CD1 C N N 296 LEU CD2 C N N 297 LEU OXT O N N 298 LEU H H N N 299 LEU H2 H N N 300 LEU HA H N N 301 LEU HB2 H N N 302 LEU HB3 H N N 303 LEU HG H N N 304 LEU HD11 H N N 305 LEU HD12 H N N 306 LEU HD13 H N N 307 LEU HD21 H N N 308 LEU HD22 H N N 309 LEU HD23 H N N 310 LEU HXT H N N 311 LYS N N N N 312 LYS CA C N S 313 LYS C C N N 314 LYS O O N N 315 LYS CB C N N 316 LYS CG C N N 317 LYS CD C N N 318 LYS CE C N N 319 LYS NZ N N N 320 LYS OXT O N N 321 LYS H H N N 322 LYS H2 H N N 323 LYS HA H N N 324 LYS HB2 H N N 325 LYS HB3 H N N 326 LYS HG2 H N N 327 LYS HG3 H N N 328 LYS HD2 H N N 329 LYS HD3 H N N 330 LYS HE2 H N N 331 LYS HE3 H N N 332 LYS HZ1 H N N 333 LYS HZ2 H N N 334 LYS HZ3 H N N 335 LYS HXT H N N 336 MET N N N N 337 MET CA C N S 338 MET C C N N 339 MET O O N N 340 MET CB C N N 341 MET CG C N N 342 MET SD S N N 343 MET CE C N N 344 MET OXT O N N 345 MET H H N N 346 MET H2 H N N 347 MET HA H N N 348 MET HB2 H N N 349 MET HB3 H N N 350 MET HG2 H N N 351 MET HG3 H N N 352 MET HE1 H N N 353 MET HE2 H N N 354 MET HE3 H N N 355 MET HXT H N N 356 PHE N N N N 357 PHE CA C N S 358 PHE C C N N 359 PHE O O N N 360 PHE CB C N N 361 PHE CG C Y N 362 PHE CD1 C Y N 363 PHE CD2 C Y N 364 PHE CE1 C Y N 365 PHE CE2 C Y N 366 PHE CZ C Y N 367 PHE OXT O N N 368 PHE H H N N 369 PHE H2 H N N 370 PHE HA H N N 371 PHE HB2 H N N 372 PHE HB3 H N N 373 PHE HD1 H N N 374 PHE HD2 H N N 375 PHE HE1 H N N 376 PHE HE2 H N N 377 PHE HZ H N N 378 PHE HXT H N N 379 PRO N N N N 380 PRO CA C N S 381 PRO C C N N 382 PRO O O N N 383 PRO CB C N N 384 PRO CG C N N 385 PRO CD C N N 386 PRO OXT O N N 387 PRO H H N N 388 PRO HA H N N 389 PRO HB2 H N N 390 PRO HB3 H N N 391 PRO HG2 H N N 392 PRO HG3 H N N 393 PRO HD2 H N N 394 PRO HD3 H N N 395 PRO HXT H N N 396 SER N N N N 397 SER CA C N S 398 SER C C N N 399 SER O O N N 400 SER CB C N N 401 SER OG O N N 402 SER OXT O N N 403 SER H H N N 404 SER H2 H N N 405 SER HA H N N 406 SER HB2 H N N 407 SER HB3 H N N 408 SER HG H N N 409 SER HXT H N N 410 THR N N N N 411 THR CA C N S 412 THR C C N N 413 THR O O N N 414 THR CB C N R 415 THR OG1 O N N 416 THR CG2 C N N 417 THR OXT O N N 418 THR H H N N 419 THR H2 H N N 420 THR HA H N N 421 THR HB H N N 422 THR HG1 H N N 423 THR HG21 H N N 424 THR HG22 H N N 425 THR HG23 H N N 426 THR HXT H N N 427 TRP N N N N 428 TRP CA C N S 429 TRP C C N N 430 TRP O O N N 431 TRP CB C N N 432 TRP CG C Y N 433 TRP CD1 C Y N 434 TRP CD2 C Y N 435 TRP NE1 N Y N 436 TRP CE2 C Y N 437 TRP CE3 C Y N 438 TRP CZ2 C Y N 439 TRP CZ3 C Y N 440 TRP CH2 C Y N 441 TRP OXT O N N 442 TRP H H N N 443 TRP H2 H N N 444 TRP HA H N N 445 TRP HB2 H N N 446 TRP HB3 H N N 447 TRP HD1 H N N 448 TRP HE1 H N N 449 TRP HE3 H N N 450 TRP HZ2 H N N 451 TRP HZ3 H N N 452 TRP HH2 H N N 453 TRP HXT H N N 454 TYR N N N N 455 TYR CA C N S 456 TYR C C N N 457 TYR O O N N 458 TYR CB C N N 459 TYR CG C Y N 460 TYR CD1 C Y N 461 TYR CD2 C Y N 462 TYR CE1 C Y N 463 TYR CE2 C Y N 464 TYR CZ C Y N 465 TYR OH O N N 466 TYR OXT O N N 467 TYR H H N N 468 TYR H2 H N N 469 TYR HA H N N 470 TYR HB2 H N N 471 TYR HB3 H N N 472 TYR HD1 H N N 473 TYR HD2 H N N 474 TYR HE1 H N N 475 TYR HE2 H N N 476 TYR HH H N N 477 TYR HXT H N N 478 U OP3 O N N 479 U P P N N 480 U OP1 O N N 481 U OP2 O N N 482 U "O5'" O N N 483 U "C5'" C N N 484 U "C4'" C N R 485 U "O4'" O N N 486 U "C3'" C N S 487 U "O3'" O N N 488 U "C2'" C N R 489 U "O2'" O N N 490 U "C1'" C N R 491 U N1 N N N 492 U C2 C N N 493 U O2 O N N 494 U N3 N N N 495 U C4 C N N 496 U O4 O N N 497 U C5 C N N 498 U C6 C N N 499 U HOP3 H N N 500 U HOP2 H N N 501 U "H5'" H N N 502 U "H5''" H N N 503 U "H4'" H N N 504 U "H3'" H N N 505 U "HO3'" H N N 506 U "H2'" H N N 507 U "HO2'" H N N 508 U "H1'" H N N 509 U H3 H N N 510 U H5 H N N 511 U H6 H N N 512 VAL N N N N 513 VAL CA C N S 514 VAL C C N N 515 VAL O O N N 516 VAL CB C N N 517 VAL CG1 C N N 518 VAL CG2 C N N 519 VAL OXT O N N 520 VAL H H N N 521 VAL H2 H N N 522 VAL HA H N N 523 VAL HB H N N 524 VAL HG11 H N N 525 VAL HG12 H N N 526 VAL HG13 H N N 527 VAL HG21 H N N 528 VAL HG22 H N N 529 VAL HG23 H N N 530 VAL HXT H N N 531 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 ALA N CA sing N N 40 ALA N H sing N N 41 ALA N H2 sing N N 42 ALA CA C sing N N 43 ALA CA CB sing N N 44 ALA CA HA sing N N 45 ALA C O doub N N 46 ALA C OXT sing N N 47 ALA CB HB1 sing N N 48 ALA CB HB2 sing N N 49 ALA CB HB3 sing N N 50 ALA OXT HXT sing N N 51 ARG N CA sing N N 52 ARG N H sing N N 53 ARG N H2 sing N N 54 ARG CA C sing N N 55 ARG CA CB sing N N 56 ARG CA HA sing N N 57 ARG C O doub N N 58 ARG C OXT sing N N 59 ARG CB CG sing N N 60 ARG CB HB2 sing N N 61 ARG CB HB3 sing N N 62 ARG CG CD sing N N 63 ARG CG HG2 sing N N 64 ARG CG HG3 sing N N 65 ARG CD NE sing N N 66 ARG CD HD2 sing N N 67 ARG CD HD3 sing N N 68 ARG NE CZ sing N N 69 ARG NE HE sing N N 70 ARG CZ NH1 sing N N 71 ARG CZ NH2 doub N N 72 ARG NH1 HH11 sing N N 73 ARG NH1 HH12 sing N N 74 ARG NH2 HH21 sing N N 75 ARG NH2 HH22 sing N N 76 ARG OXT HXT sing N N 77 ASN N CA sing N N 78 ASN N H sing N N 79 ASN N H2 sing N N 80 ASN CA C sing N N 81 ASN CA CB sing N N 82 ASN CA HA sing N N 83 ASN C O doub N N 84 ASN C OXT sing N N 85 ASN CB CG sing N N 86 ASN CB HB2 sing N N 87 ASN CB HB3 sing N N 88 ASN CG OD1 doub N N 89 ASN CG ND2 sing N N 90 ASN ND2 HD21 sing N N 91 ASN ND2 HD22 sing N N 92 ASN OXT HXT sing N N 93 ASP N CA sing N N 94 ASP N H sing N N 95 ASP N H2 sing N N 96 ASP CA C sing N N 97 ASP CA CB sing N N 98 ASP CA HA sing N N 99 ASP C O doub N N 100 ASP C OXT sing N N 101 ASP CB CG sing N N 102 ASP CB HB2 sing N N 103 ASP CB HB3 sing N N 104 ASP CG OD1 doub N N 105 ASP CG OD2 sing N N 106 ASP OD2 HD2 sing N N 107 ASP OXT HXT sing N N 108 C OP3 P sing N N 109 C OP3 HOP3 sing N N 110 C P OP1 doub N N 111 C P OP2 sing N N 112 C P "O5'" sing N N 113 C OP2 HOP2 sing N N 114 C "O5'" "C5'" sing N N 115 C "C5'" "C4'" sing N N 116 C "C5'" "H5'" sing N N 117 C "C5'" "H5''" sing N N 118 C "C4'" "O4'" sing N N 119 C "C4'" "C3'" sing N N 120 C "C4'" "H4'" sing N N 121 C "O4'" "C1'" sing N N 122 C "C3'" "O3'" sing N N 123 C "C3'" "C2'" sing N N 124 C "C3'" "H3'" sing N N 125 C "O3'" "HO3'" sing N N 126 C "C2'" "O2'" sing N N 127 C "C2'" "C1'" sing N N 128 C "C2'" "H2'" sing N N 129 C "O2'" "HO2'" sing N N 130 C "C1'" N1 sing N N 131 C "C1'" "H1'" sing N N 132 C N1 C2 sing N N 133 C N1 C6 sing N N 134 C C2 O2 doub N N 135 C C2 N3 sing N N 136 C N3 C4 doub N N 137 C C4 N4 sing N N 138 C C4 C5 sing N N 139 C N4 H41 sing N N 140 C N4 H42 sing N N 141 C C5 C6 doub N N 142 C C5 H5 sing N N 143 C C6 H6 sing N N 144 CYS N CA sing N N 145 CYS N H sing N N 146 CYS N H2 sing N N 147 CYS CA C sing N N 148 CYS CA CB sing N N 149 CYS CA HA sing N N 150 CYS C O doub N N 151 CYS C OXT sing N N 152 CYS CB SG sing N N 153 CYS CB HB2 sing N N 154 CYS CB HB3 sing N N 155 CYS SG HG sing N N 156 CYS OXT HXT sing N N 157 G OP3 P sing N N 158 G OP3 HOP3 sing N N 159 G P OP1 doub N N 160 G P OP2 sing N N 161 G P "O5'" sing N N 162 G OP2 HOP2 sing N N 163 G "O5'" "C5'" sing N N 164 G "C5'" "C4'" sing N N 165 G "C5'" "H5'" sing N N 166 G "C5'" "H5''" sing N N 167 G "C4'" "O4'" sing N N 168 G "C4'" "C3'" sing N N 169 G "C4'" "H4'" sing N N 170 G "O4'" "C1'" sing N N 171 G "C3'" "O3'" sing N N 172 G "C3'" "C2'" sing N N 173 G "C3'" "H3'" sing N N 174 G "O3'" "HO3'" sing N N 175 G "C2'" "O2'" sing N N 176 G "C2'" "C1'" sing N N 177 G "C2'" "H2'" sing N N 178 G "O2'" "HO2'" sing N N 179 G "C1'" N9 sing N N 180 G "C1'" "H1'" sing N N 181 G N9 C8 sing Y N 182 G N9 C4 sing Y N 183 G C8 N7 doub Y N 184 G C8 H8 sing N N 185 G N7 C5 sing Y N 186 G C5 C6 sing N N 187 G C5 C4 doub Y N 188 G C6 O6 doub N N 189 G C6 N1 sing N N 190 G N1 C2 sing N N 191 G N1 H1 sing N N 192 G C2 N2 sing N N 193 G C2 N3 doub N N 194 G N2 H21 sing N N 195 G N2 H22 sing N N 196 G N3 C4 sing N N 197 GLN N CA sing N N 198 GLN N H sing N N 199 GLN N H2 sing N N 200 GLN CA C sing N N 201 GLN CA CB sing N N 202 GLN CA HA sing N N 203 GLN C O doub N N 204 GLN C OXT sing N N 205 GLN CB CG sing N N 206 GLN CB HB2 sing N N 207 GLN CB HB3 sing N N 208 GLN CG CD sing N N 209 GLN CG HG2 sing N N 210 GLN CG HG3 sing N N 211 GLN CD OE1 doub N N 212 GLN CD NE2 sing N N 213 GLN NE2 HE21 sing N N 214 GLN NE2 HE22 sing N N 215 GLN OXT HXT sing N N 216 GLU N CA sing N N 217 GLU N H sing N N 218 GLU N H2 sing N N 219 GLU CA C sing N N 220 GLU CA CB sing N N 221 GLU CA HA sing N N 222 GLU C O doub N N 223 GLU C OXT sing N N 224 GLU CB CG sing N N 225 GLU CB HB2 sing N N 226 GLU CB HB3 sing N N 227 GLU CG CD sing N N 228 GLU CG HG2 sing N N 229 GLU CG HG3 sing N N 230 GLU CD OE1 doub N N 231 GLU CD OE2 sing N N 232 GLU OE2 HE2 sing N N 233 GLU OXT HXT sing N N 234 GLY N CA sing N N 235 GLY N H sing N N 236 GLY N H2 sing N N 237 GLY CA C sing N N 238 GLY CA HA2 sing N N 239 GLY CA HA3 sing N N 240 GLY C O doub N N 241 GLY C OXT sing N N 242 GLY OXT HXT sing N N 243 HIS N CA sing N N 244 HIS N H sing N N 245 HIS N H2 sing N N 246 HIS CA C sing N N 247 HIS CA CB sing N N 248 HIS CA HA sing N N 249 HIS C O doub N N 250 HIS C OXT sing N N 251 HIS CB CG sing N N 252 HIS CB HB2 sing N N 253 HIS CB HB3 sing N N 254 HIS CG ND1 sing Y N 255 HIS CG CD2 doub Y N 256 HIS ND1 CE1 doub Y N 257 HIS ND1 HD1 sing N N 258 HIS CD2 NE2 sing Y N 259 HIS CD2 HD2 sing N N 260 HIS CE1 NE2 sing Y N 261 HIS CE1 HE1 sing N N 262 HIS NE2 HE2 sing N N 263 HIS OXT HXT sing N N 264 ILE N CA sing N N 265 ILE N H sing N N 266 ILE N H2 sing N N 267 ILE CA C sing N N 268 ILE CA CB sing N N 269 ILE CA HA sing N N 270 ILE C O doub N N 271 ILE C OXT sing N N 272 ILE CB CG1 sing N N 273 ILE CB CG2 sing N N 274 ILE CB HB sing N N 275 ILE CG1 CD1 sing N N 276 ILE CG1 HG12 sing N N 277 ILE CG1 HG13 sing N N 278 ILE CG2 HG21 sing N N 279 ILE CG2 HG22 sing N N 280 ILE CG2 HG23 sing N N 281 ILE CD1 HD11 sing N N 282 ILE CD1 HD12 sing N N 283 ILE CD1 HD13 sing N N 284 ILE OXT HXT sing N N 285 LEU N CA sing N N 286 LEU N H sing N N 287 LEU N H2 sing N N 288 LEU CA C sing N N 289 LEU CA CB sing N N 290 LEU CA HA sing N N 291 LEU C O doub N N 292 LEU C OXT sing N N 293 LEU CB CG sing N N 294 LEU CB HB2 sing N N 295 LEU CB HB3 sing N N 296 LEU CG CD1 sing N N 297 LEU CG CD2 sing N N 298 LEU CG HG sing N N 299 LEU CD1 HD11 sing N N 300 LEU CD1 HD12 sing N N 301 LEU CD1 HD13 sing N N 302 LEU CD2 HD21 sing N N 303 LEU CD2 HD22 sing N N 304 LEU CD2 HD23 sing N N 305 LEU OXT HXT sing N N 306 LYS N CA sing N N 307 LYS N H sing N N 308 LYS N H2 sing N N 309 LYS CA C sing N N 310 LYS CA CB sing N N 311 LYS CA HA sing N N 312 LYS C O doub N N 313 LYS C OXT sing N N 314 LYS CB CG sing N N 315 LYS CB HB2 sing N N 316 LYS CB HB3 sing N N 317 LYS CG CD sing N N 318 LYS CG HG2 sing N N 319 LYS CG HG3 sing N N 320 LYS CD CE sing N N 321 LYS CD HD2 sing N N 322 LYS CD HD3 sing N N 323 LYS CE NZ sing N N 324 LYS CE HE2 sing N N 325 LYS CE HE3 sing N N 326 LYS NZ HZ1 sing N N 327 LYS NZ HZ2 sing N N 328 LYS NZ HZ3 sing N N 329 LYS OXT HXT sing N N 330 MET N CA sing N N 331 MET N H sing N N 332 MET N H2 sing N N 333 MET CA C sing N N 334 MET CA CB sing N N 335 MET CA HA sing N N 336 MET C O doub N N 337 MET C OXT sing N N 338 MET CB CG sing N N 339 MET CB HB2 sing N N 340 MET CB HB3 sing N N 341 MET CG SD sing N N 342 MET CG HG2 sing N N 343 MET CG HG3 sing N N 344 MET SD CE sing N N 345 MET CE HE1 sing N N 346 MET CE HE2 sing N N 347 MET CE HE3 sing N N 348 MET OXT HXT sing N N 349 PHE N CA sing N N 350 PHE N H sing N N 351 PHE N H2 sing N N 352 PHE CA C sing N N 353 PHE CA CB sing N N 354 PHE CA HA sing N N 355 PHE C O doub N N 356 PHE C OXT sing N N 357 PHE CB CG sing N N 358 PHE CB HB2 sing N N 359 PHE CB HB3 sing N N 360 PHE CG CD1 doub Y N 361 PHE CG CD2 sing Y N 362 PHE CD1 CE1 sing Y N 363 PHE CD1 HD1 sing N N 364 PHE CD2 CE2 doub Y N 365 PHE CD2 HD2 sing N N 366 PHE CE1 CZ doub Y N 367 PHE CE1 HE1 sing N N 368 PHE CE2 CZ sing Y N 369 PHE CE2 HE2 sing N N 370 PHE CZ HZ sing N N 371 PHE OXT HXT sing N N 372 PRO N CA sing N N 373 PRO N CD sing N N 374 PRO N H sing N N 375 PRO CA C sing N N 376 PRO CA CB sing N N 377 PRO CA HA sing N N 378 PRO C O doub N N 379 PRO C OXT sing N N 380 PRO CB CG sing N N 381 PRO CB HB2 sing N N 382 PRO CB HB3 sing N N 383 PRO CG CD sing N N 384 PRO CG HG2 sing N N 385 PRO CG HG3 sing N N 386 PRO CD HD2 sing N N 387 PRO CD HD3 sing N N 388 PRO OXT HXT sing N N 389 SER N CA sing N N 390 SER N H sing N N 391 SER N H2 sing N N 392 SER CA C sing N N 393 SER CA CB sing N N 394 SER CA HA sing N N 395 SER C O doub N N 396 SER C OXT sing N N 397 SER CB OG sing N N 398 SER CB HB2 sing N N 399 SER CB HB3 sing N N 400 SER OG HG sing N N 401 SER OXT HXT sing N N 402 THR N CA sing N N 403 THR N H sing N N 404 THR N H2 sing N N 405 THR CA C sing N N 406 THR CA CB sing N N 407 THR CA HA sing N N 408 THR C O doub N N 409 THR C OXT sing N N 410 THR CB OG1 sing N N 411 THR CB CG2 sing N N 412 THR CB HB sing N N 413 THR OG1 HG1 sing N N 414 THR CG2 HG21 sing N N 415 THR CG2 HG22 sing N N 416 THR CG2 HG23 sing N N 417 THR OXT HXT sing N N 418 TRP N CA sing N N 419 TRP N H sing N N 420 TRP N H2 sing N N 421 TRP CA C sing N N 422 TRP CA CB sing N N 423 TRP CA HA sing N N 424 TRP C O doub N N 425 TRP C OXT sing N N 426 TRP CB CG sing N N 427 TRP CB HB2 sing N N 428 TRP CB HB3 sing N N 429 TRP CG CD1 doub Y N 430 TRP CG CD2 sing Y N 431 TRP CD1 NE1 sing Y N 432 TRP CD1 HD1 sing N N 433 TRP CD2 CE2 doub Y N 434 TRP CD2 CE3 sing Y N 435 TRP NE1 CE2 sing Y N 436 TRP NE1 HE1 sing N N 437 TRP CE2 CZ2 sing Y N 438 TRP CE3 CZ3 doub Y N 439 TRP CE3 HE3 sing N N 440 TRP CZ2 CH2 doub Y N 441 TRP CZ2 HZ2 sing N N 442 TRP CZ3 CH2 sing Y N 443 TRP CZ3 HZ3 sing N N 444 TRP CH2 HH2 sing N N 445 TRP OXT HXT sing N N 446 TYR N CA sing N N 447 TYR N H sing N N 448 TYR N H2 sing N N 449 TYR CA C sing N N 450 TYR CA CB sing N N 451 TYR CA HA sing N N 452 TYR C O doub N N 453 TYR C OXT sing N N 454 TYR CB CG sing N N 455 TYR CB HB2 sing N N 456 TYR CB HB3 sing N N 457 TYR CG CD1 doub Y N 458 TYR CG CD2 sing Y N 459 TYR CD1 CE1 sing Y N 460 TYR CD1 HD1 sing N N 461 TYR CD2 CE2 doub Y N 462 TYR CD2 HD2 sing N N 463 TYR CE1 CZ doub Y N 464 TYR CE1 HE1 sing N N 465 TYR CE2 CZ sing Y N 466 TYR CE2 HE2 sing N N 467 TYR CZ OH sing N N 468 TYR OH HH sing N N 469 TYR OXT HXT sing N N 470 U OP3 P sing N N 471 U OP3 HOP3 sing N N 472 U P OP1 doub N N 473 U P OP2 sing N N 474 U P "O5'" sing N N 475 U OP2 HOP2 sing N N 476 U "O5'" "C5'" sing N N 477 U "C5'" "C4'" sing N N 478 U "C5'" "H5'" sing N N 479 U "C5'" "H5''" sing N N 480 U "C4'" "O4'" sing N N 481 U "C4'" "C3'" sing N N 482 U "C4'" "H4'" sing N N 483 U "O4'" "C1'" sing N N 484 U "C3'" "O3'" sing N N 485 U "C3'" "C2'" sing N N 486 U "C3'" "H3'" sing N N 487 U "O3'" "HO3'" sing N N 488 U "C2'" "O2'" sing N N 489 U "C2'" "C1'" sing N N 490 U "C2'" "H2'" sing N N 491 U "O2'" "HO2'" sing N N 492 U "C1'" N1 sing N N 493 U "C1'" "H1'" sing N N 494 U N1 C2 sing N N 495 U N1 C6 sing N N 496 U C2 O2 doub N N 497 U C2 N3 sing N N 498 U N3 C4 sing N N 499 U N3 H3 sing N N 500 U C4 O4 doub N N 501 U C4 C5 sing N N 502 U C5 C6 doub N N 503 U C5 H5 sing N N 504 U C6 H6 sing N N 505 VAL N CA sing N N 506 VAL N H sing N N 507 VAL N H2 sing N N 508 VAL CA C sing N N 509 VAL CA CB sing N N 510 VAL CA HA sing N N 511 VAL C O doub N N 512 VAL C OXT sing N N 513 VAL CB CG1 sing N N 514 VAL CB CG2 sing N N 515 VAL CB HB sing N N 516 VAL CG1 HG11 sing N N 517 VAL CG1 HG12 sing N N 518 VAL CG1 HG13 sing N N 519 VAL CG2 HG21 sing N N 520 VAL CG2 HG22 sing N N 521 VAL CG2 HG23 sing N N 522 VAL OXT HXT sing N N 523 # loop_ _pdbx_coordinate_model.asym_id _pdbx_coordinate_model.type A 'P ATOMS ONLY' B 'CA ATOMS ONLY' # _atom_sites.entry_id 1EMI _atom_sites.fract_transf_matrix[1][1] 0.001969 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.001969 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.001245 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C P # loop_