HEADER TRANSCRIPTION 21-MAR-00 1ENW TITLE ELONGATION FACTOR TFIIS DOMAIN II COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSCRIPTION ELONGATION FACTOR S-II; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: DOMAIN II (RESIDUES 131-240); COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 EXPRESSION_SYSTEM: BACTERIA; SOURCE 6 EXPRESSION_SYSTEM_COMMON: EUBACTERIA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 2 KEYWDS HELIX-BUNDLE, TRANSCRIPTION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR P.E.MORIN,D.E.AWREY,A.M.EDWARDS,C.H.ARROWSMITH REVDAT 6 22-MAY-24 1ENW 1 REMARK REVDAT 5 21-DEC-22 1ENW 1 SEQADV REVDAT 4 16-FEB-22 1ENW 1 REMARK REVDAT 3 24-FEB-09 1ENW 1 VERSN REVDAT 2 10-MAY-00 1ENW 1 EXPDTA REVDAT 1 12-APR-00 1ENW 0 JRNL AUTH P.E.MORIN,D.E.AWREY,A.M.EDWARDS,C.H.ARROWSMITH JRNL TITL ELONGATION FACTOR TFIIS CONTAINS THREE STRUCTURAL DOMAINS: JRNL TITL 2 SOLUTION STRUCTURE OF DOMAIN II. JRNL REF PROC.NATL.ACAD.SCI.USA V. 93 10604 1996 JRNL REFN ISSN 0027-8424 JRNL PMID 8855225 JRNL DOI 10.1073/PNAS.93.20.10604 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NMRPIPE 1995, X-PLOR 3.851 REMARK 3 AUTHORS : DELAGLIO (NMRPIPE), BRUNGER (X-PLOR) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1ENW COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-MAR-00. REMARK 100 THE DEPOSITION ID IS D_1000010750. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 270 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 50 MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 2 MM TFIIS; 5MM PHOSPHATE REMARK 210 BUFFER; 90% H2O, 10% D2O; 2 MM REMARK 210 TFIIS; 5MM PHOSPHATE BUFFER; REMARK 210 99.996% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY; 3D_15N REMARK 210 -SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ; 600 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : X-PLOR 3.851 REMARK 210 METHOD USED : SIMULATED ANNEALING MOLECULAR REMARK 210 DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 50 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (RES=RESIDUE NAME; REMARK 470 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 470 MODELS 1-20 REMARK 470 RES CSSEQI ATOMS REMARK 470 PRO A 114 O REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 H ASN A 60 H ASN A 61 1.31 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 1 HIS A 3 CG HIS A 3 ND1 -0.120 REMARK 500 1 HIS A 19 CG HIS A 19 ND1 -0.119 REMARK 500 1 HIS A 20 CG HIS A 20 ND1 -0.122 REMARK 500 1 HIS A 40 CG HIS A 40 ND1 -0.119 REMARK 500 1 HIS A 47 CG HIS A 47 ND1 -0.120 REMARK 500 1 HIS A 90 CG HIS A 90 ND1 -0.119 REMARK 500 2 HIS A 3 CG HIS A 3 ND1 -0.120 REMARK 500 2 HIS A 19 CG HIS A 19 ND1 -0.120 REMARK 500 2 HIS A 20 CG HIS A 20 ND1 -0.121 REMARK 500 2 HIS A 40 CG HIS A 40 ND1 -0.120 REMARK 500 2 HIS A 47 CG HIS A 47 ND1 -0.120 REMARK 500 2 HIS A 90 CG HIS A 90 ND1 -0.121 REMARK 500 3 HIS A 3 CG HIS A 3 ND1 -0.121 REMARK 500 3 HIS A 19 CG HIS A 19 ND1 -0.120 REMARK 500 3 HIS A 20 CG HIS A 20 ND1 -0.122 REMARK 500 3 HIS A 40 CG HIS A 40 ND1 -0.121 REMARK 500 3 HIS A 47 CG HIS A 47 ND1 -0.120 REMARK 500 3 HIS A 90 CG HIS A 90 ND1 -0.121 REMARK 500 4 HIS A 3 CG HIS A 3 ND1 -0.122 REMARK 500 4 HIS A 19 CG HIS A 19 ND1 -0.122 REMARK 500 4 HIS A 20 CG HIS A 20 ND1 -0.119 REMARK 500 4 HIS A 40 CG HIS A 40 ND1 -0.121 REMARK 500 4 HIS A 47 CG HIS A 47 ND1 -0.120 REMARK 500 4 HIS A 90 CG HIS A 90 ND1 -0.121 REMARK 500 5 HIS A 3 CG HIS A 3 ND1 -0.121 REMARK 500 5 HIS A 19 CG HIS A 19 ND1 -0.122 REMARK 500 5 HIS A 20 CG HIS A 20 ND1 -0.119 REMARK 500 5 HIS A 40 CG HIS A 40 ND1 -0.122 REMARK 500 5 HIS A 47 CG HIS A 47 ND1 -0.120 REMARK 500 5 HIS A 90 CG HIS A 90 ND1 -0.122 REMARK 500 6 HIS A 3 CG HIS A 3 ND1 -0.121 REMARK 500 6 HIS A 19 CG HIS A 19 ND1 -0.119 REMARK 500 6 HIS A 20 CG HIS A 20 ND1 -0.121 REMARK 500 6 HIS A 40 CG HIS A 40 ND1 -0.118 REMARK 500 6 HIS A 47 CG HIS A 47 ND1 -0.122 REMARK 500 6 HIS A 90 CG HIS A 90 ND1 -0.122 REMARK 500 7 HIS A 3 CG HIS A 3 ND1 -0.121 REMARK 500 7 HIS A 19 CG HIS A 19 ND1 -0.121 REMARK 500 7 HIS A 20 CG HIS A 20 ND1 -0.121 REMARK 500 7 HIS A 40 CG HIS A 40 ND1 -0.120 REMARK 500 7 HIS A 47 CG HIS A 47 ND1 -0.122 REMARK 500 7 HIS A 90 CG HIS A 90 ND1 -0.122 REMARK 500 8 HIS A 3 CG HIS A 3 ND1 -0.120 REMARK 500 8 HIS A 19 CG HIS A 19 ND1 -0.121 REMARK 500 8 HIS A 20 CG HIS A 20 ND1 -0.123 REMARK 500 8 HIS A 40 CG HIS A 40 ND1 -0.122 REMARK 500 8 HIS A 47 CG HIS A 47 ND1 -0.121 REMARK 500 8 HIS A 90 CG HIS A 90 ND1 -0.119 REMARK 500 9 HIS A 3 CG HIS A 3 ND1 -0.119 REMARK 500 9 HIS A 19 CG HIS A 19 ND1 -0.119 REMARK 500 REMARK 500 THIS ENTRY HAS 120 BOND DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 2 7.76 -179.53 REMARK 500 1 PRO A 5 -170.74 -68.89 REMARK 500 1 ARG A 6 -148.99 -89.93 REMARK 500 1 ASN A 7 -18.65 -142.29 REMARK 500 1 SER A 8 31.07 -78.80 REMARK 500 1 ILE A 17 -92.21 -156.35 REMARK 500 1 HIS A 19 -6.18 -39.94 REMARK 500 1 HIS A 20 -72.86 -31.05 REMARK 500 1 LYS A 21 -72.92 -96.89 REMARK 500 1 ALA A 35 -70.42 -79.32 REMARK 500 1 GLU A 37 -70.26 -44.90 REMARK 500 1 SER A 44 57.05 116.73 REMARK 500 1 THR A 48 -61.24 -90.08 REMARK 500 1 GLU A 53 -8.27 -49.55 REMARK 500 1 GLU A 55 -66.09 -95.66 REMARK 500 1 LYS A 58 -72.30 -32.37 REMARK 500 1 VAL A 59 77.71 -161.41 REMARK 500 1 ASN A 60 -10.43 -161.39 REMARK 500 1 ASN A 61 -80.16 -52.81 REMARK 500 1 THR A 64 -75.44 -152.92 REMARK 500 1 ARG A 72 -71.01 -41.79 REMARK 500 1 TYR A 73 -71.36 -50.74 REMARK 500 1 ILE A 75 -71.35 -61.07 REMARK 500 1 ILE A 76 -9.46 -57.32 REMARK 500 1 TYR A 77 -28.29 -37.79 REMARK 500 1 SER A 82 -63.85 -95.28 REMARK 500 1 LYS A 83 -87.64 -129.86 REMARK 500 1 ASN A 84 -159.18 -159.24 REMARK 500 1 PRO A 86 27.24 -69.84 REMARK 500 1 ASP A 87 65.18 60.43 REMARK 500 1 LEU A 88 -32.85 -33.08 REMARK 500 1 ASN A 94 57.12 -155.44 REMARK 500 1 PRO A 99 34.36 18.69 REMARK 500 1 LEU A 102 -8.27 -53.43 REMARK 500 1 THR A 104 -16.54 -150.27 REMARK 500 1 PRO A 112 -151.51 -62.98 REMARK 500 1 ALA A 113 86.93 -168.77 REMARK 500 2 MET A 4 64.01 -168.64 REMARK 500 2 PRO A 5 -176.37 -64.06 REMARK 500 2 ARG A 6 88.03 24.00 REMARK 500 2 ALA A 16 88.77 -160.38 REMARK 500 2 ILE A 17 -80.07 -164.52 REMARK 500 2 TYR A 18 -5.37 -54.00 REMARK 500 2 HIS A 19 -7.23 -41.06 REMARK 500 2 HIS A 20 -72.42 -32.95 REMARK 500 2 LYS A 21 -74.15 -98.38 REMARK 500 2 LEU A 22 14.51 -154.18 REMARK 500 2 GLU A 37 -70.67 -42.12 REMARK 500 2 SER A 44 78.66 -171.00 REMARK 500 2 THR A 48 -70.27 -91.04 REMARK 500 REMARK 500 THIS ENTRY HAS 563 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 1 ARG A 6 0.31 SIDE CHAIN REMARK 500 1 ARG A 23 0.30 SIDE CHAIN REMARK 500 1 ARG A 72 0.13 SIDE CHAIN REMARK 500 1 ARG A 74 0.32 SIDE CHAIN REMARK 500 2 ARG A 6 0.32 SIDE CHAIN REMARK 500 2 ARG A 23 0.19 SIDE CHAIN REMARK 500 2 ARG A 72 0.23 SIDE CHAIN REMARK 500 2 ARG A 74 0.17 SIDE CHAIN REMARK 500 3 ARG A 6 0.31 SIDE CHAIN REMARK 500 3 ARG A 23 0.31 SIDE CHAIN REMARK 500 3 ARG A 72 0.32 SIDE CHAIN REMARK 500 3 ARG A 74 0.31 SIDE CHAIN REMARK 500 4 ARG A 6 0.21 SIDE CHAIN REMARK 500 4 ARG A 23 0.26 SIDE CHAIN REMARK 500 4 ARG A 72 0.32 SIDE CHAIN REMARK 500 4 ARG A 74 0.08 SIDE CHAIN REMARK 500 5 ARG A 6 0.27 SIDE CHAIN REMARK 500 5 ARG A 23 0.22 SIDE CHAIN REMARK 500 5 ARG A 72 0.27 SIDE CHAIN REMARK 500 5 ARG A 74 0.31 SIDE CHAIN REMARK 500 6 ARG A 6 0.21 SIDE CHAIN REMARK 500 6 ARG A 72 0.32 SIDE CHAIN REMARK 500 7 ARG A 6 0.30 SIDE CHAIN REMARK 500 7 ARG A 23 0.32 SIDE CHAIN REMARK 500 7 ARG A 72 0.18 SIDE CHAIN REMARK 500 7 ARG A 74 0.29 SIDE CHAIN REMARK 500 8 ARG A 6 0.16 SIDE CHAIN REMARK 500 8 ARG A 23 0.30 SIDE CHAIN REMARK 500 8 ARG A 72 0.20 SIDE CHAIN REMARK 500 8 ARG A 74 0.21 SIDE CHAIN REMARK 500 9 ARG A 6 0.15 SIDE CHAIN REMARK 500 9 ARG A 23 0.30 SIDE CHAIN REMARK 500 9 ARG A 72 0.15 SIDE CHAIN REMARK 500 9 ARG A 74 0.22 SIDE CHAIN REMARK 500 10 ARG A 6 0.26 SIDE CHAIN REMARK 500 10 ARG A 23 0.08 SIDE CHAIN REMARK 500 10 ARG A 72 0.32 SIDE CHAIN REMARK 500 10 ARG A 74 0.31 SIDE CHAIN REMARK 500 11 ARG A 6 0.32 SIDE CHAIN REMARK 500 11 ARG A 23 0.31 SIDE CHAIN REMARK 500 11 ARG A 72 0.31 SIDE CHAIN REMARK 500 11 ARG A 74 0.32 SIDE CHAIN REMARK 500 12 ARG A 6 0.32 SIDE CHAIN REMARK 500 12 ARG A 23 0.31 SIDE CHAIN REMARK 500 12 ARG A 72 0.31 SIDE CHAIN REMARK 500 12 ARG A 74 0.31 SIDE CHAIN REMARK 500 13 ARG A 6 0.31 SIDE CHAIN REMARK 500 13 ARG A 23 0.19 SIDE CHAIN REMARK 500 13 ARG A 72 0.28 SIDE CHAIN REMARK 500 13 ARG A 74 0.18 SIDE CHAIN REMARK 500 REMARK 500 THIS ENTRY HAS 76 PLANE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL DBREF 1ENW A 5 114 UNP P07273 TFS2_YEAST 131 240 SEQADV 1ENW GLY A 1 UNP P07273 CLONING ARTIFACT SEQADV 1ENW SER A 2 UNP P07273 CLONING ARTIFACT SEQADV 1ENW HIS A 3 UNP P07273 CLONING ARTIFACT SEQADV 1ENW MET A 4 UNP P07273 CLONING ARTIFACT SEQRES 1 A 114 GLY SER HIS MET PRO ARG ASN SER LYS ASN ASP GLY VAL SEQRES 2 A 114 ASP THR ALA ILE TYR HIS HIS LYS LEU ARG ASP GLN VAL SEQRES 3 A 114 LEU LYS ALA LEU TYR ASP VAL LEU ALA LYS GLU SER GLU SEQRES 4 A 114 HIS PRO PRO GLN SER ILE LEU HIS THR ALA LYS ALA ILE SEQRES 5 A 114 GLU SER GLU MET ASN LYS VAL ASN ASN CYS ASP THR ASN SEQRES 6 A 114 GLU ALA ALA TYR LYS ALA ARG TYR ARG ILE ILE TYR SER SEQRES 7 A 114 ASN VAL ILE SER LYS ASN ASN PRO ASP LEU LYS HIS LYS SEQRES 8 A 114 ILE ALA ASN GLY ASP ILE THR PRO GLU PHE LEU ALA THR SEQRES 9 A 114 CYS ASP ALA LYS ASP LEU ALA PRO ALA PRO HELIX 1 1 LEU A 22 SER A 38 1 17 HELIX 2 2 SER A 44 GLU A 53 1 10 HELIX 3 3 ASN A 65 ILE A 81 1 17 HELIX 4 4 HIS A 90 GLY A 95 1 6 HELIX 5 5 PHE A 101 ASP A 106 1 6 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1