data_1F5B # _entry.id 1F5B # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.351 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1F5B pdb_00001f5b 10.2210/pdb1f5b/pdb RCSB RCSB011260 ? ? WWPDB D_1000011260 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 6FDR ;X-ray crystal structure of dithionite reduced ferredoxin 1 wildtype from Azotobacter vinelandii at 1.4 angstrom resolution ; unspecified PDB 7FDR ;X-ray crystal structure of the oxidized form of ferredoxin 1 wildtype from Azotobacter vinelandii at 1.4 angstrom resolution ; unspecified PDB 1D3W ;X-ray crystal structure of ferredoxin 1 D15E mutant from Azotobacter vinelandii at 1.7 angstrom resolution ; unspecified PDB 1FDD ;X-ray crystal structure of ferredoxin 1 D15N mutant from Azotobacter vinelandii at 1.9 angstrom resolution ; unspecified PDB 1F5C . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1F5B _pdbx_database_status.recvd_initial_deposition_date 2000-06-13 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Chen, K.' 1 'Bonagura, C.A.' 2 'Tilley, G.J.' 3 'Jung, Y.S.' 4 'Armstrong, F.A.' 5 'Stout, C.D.' 6 'Burgess, B.K.' 7 # _citation.id primary _citation.title 'Crystal structures of ferredoxin variants exhibiting large changes in [Fe-S] reduction potential.' _citation.journal_abbrev Nat.Struct.Biol. _citation.journal_volume 9 _citation.page_first 188 _citation.page_last 192 _citation.year 2002 _citation.journal_id_ASTM NSBIEW _citation.country US _citation.journal_id_ISSN 1072-8368 _citation.journal_id_CSD 2024 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 11875515 _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Chen, K.' 1 ? primary 'Bonagura, C.A.' 2 ? primary 'Tilley, G.J.' 3 ? primary 'McEvoy, J.P.' 4 ? primary 'Jung, Y.S.' 5 ? primary 'Armstrong, F.A.' 6 ? primary 'Stout, C.D.' 7 ? primary 'Burgess, B.K.' 8 ? # _cell.entry_id 1F5B _cell.length_a 55.381 _cell.length_b 55.381 _cell.length_c 92.780 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1F5B _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'FERREDOXIN 1' 12050.504 1 ? F2H ? ? 2 non-polymer syn 'FE3-S4 CLUSTER' 295.795 1 ? ? ? ? 3 non-polymer syn 'IRON/SULFUR CLUSTER' 351.640 1 ? ? ? ? 4 water nat water 18.015 176 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name FDI # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;AHVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDEVPEDMQEFIQLNAELAEVWPN ITEKKDPLPDAEDWDGVKGKLQHLER ; _entity_poly.pdbx_seq_one_letter_code_can ;AHVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDEVPEDMQEFIQLNAELAEVWPN ITEKKDPLPDAEDWDGVKGKLQHLER ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 HIS n 1 3 VAL n 1 4 VAL n 1 5 THR n 1 6 ASP n 1 7 ASN n 1 8 CYS n 1 9 ILE n 1 10 LYS n 1 11 CYS n 1 12 LYS n 1 13 TYR n 1 14 THR n 1 15 ASP n 1 16 CYS n 1 17 VAL n 1 18 GLU n 1 19 VAL n 1 20 CYS n 1 21 PRO n 1 22 VAL n 1 23 ASP n 1 24 CYS n 1 25 PHE n 1 26 TYR n 1 27 GLU n 1 28 GLY n 1 29 PRO n 1 30 ASN n 1 31 PHE n 1 32 LEU n 1 33 VAL n 1 34 ILE n 1 35 HIS n 1 36 PRO n 1 37 ASP n 1 38 GLU n 1 39 CYS n 1 40 ILE n 1 41 ASP n 1 42 CYS n 1 43 ALA n 1 44 LEU n 1 45 CYS n 1 46 GLU n 1 47 PRO n 1 48 GLU n 1 49 CYS n 1 50 PRO n 1 51 ALA n 1 52 GLN n 1 53 ALA n 1 54 ILE n 1 55 PHE n 1 56 SER n 1 57 GLU n 1 58 ASP n 1 59 GLU n 1 60 VAL n 1 61 PRO n 1 62 GLU n 1 63 ASP n 1 64 MET n 1 65 GLN n 1 66 GLU n 1 67 PHE n 1 68 ILE n 1 69 GLN n 1 70 LEU n 1 71 ASN n 1 72 ALA n 1 73 GLU n 1 74 LEU n 1 75 ALA n 1 76 GLU n 1 77 VAL n 1 78 TRP n 1 79 PRO n 1 80 ASN n 1 81 ILE n 1 82 THR n 1 83 GLU n 1 84 LYS n 1 85 LYS n 1 86 ASP n 1 87 PRO n 1 88 LEU n 1 89 PRO n 1 90 ASP n 1 91 ALA n 1 92 GLU n 1 93 ASP n 1 94 TRP n 1 95 ASP n 1 96 GLY n 1 97 VAL n 1 98 LYS n 1 99 GLY n 1 100 LYS n 1 101 LEU n 1 102 GLN n 1 103 HIS n 1 104 LEU n 1 105 GLU n 1 106 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Azotobacter _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Azotobacter vinelandii' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 354 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PKT230 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_code FER1_AZOVI _struct_ref.db_name UNP _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession P00214 _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1F5B _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 106 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P00214 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 106 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 106 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 1F5B _struct_ref_seq_dif.mon_id HIS _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 2 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P00214 _struct_ref_seq_dif.db_mon_id PHE _struct_ref_seq_dif.pdbx_seq_db_seq_num 2 _struct_ref_seq_dif.details 'engineered mutation' _struct_ref_seq_dif.pdbx_auth_seq_num 2 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 F3S non-polymer . 'FE3-S4 CLUSTER' ? 'Fe3 S4' 295.795 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SF4 non-polymer . 'IRON/SULFUR CLUSTER' ? 'Fe4 S4' 351.640 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1F5B _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 58.30 _exptl_crystal.density_Matthews 2.95 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 7.4 _exptl_crystal_grow.temp 277.0 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details 'Trizma base, ammonium sulfate, potassium phosphate, pH 7.4, VAPOR DIFFUSION, SITTING DROP, temperature 277.0K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 115 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV' _diffrn_detector.pdbx_collection_date 1999-11-05 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5408 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type RIGAKU _diffrn_source.pdbx_wavelength 1.5408 _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1F5B _reflns.observed_criterion_sigma_I -3.0 _reflns.observed_criterion_sigma_F 0.0 _reflns.d_resolution_low 50.0 _reflns.d_resolution_high 1.62 _reflns.number_obs 19082 _reflns.number_all 19110 _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rmerge_I_obs 0.072 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 9.6 _reflns.B_iso_Wilson_estimate 21.60 _reflns.pdbx_redundancy 11.83 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.62 _reflns_shell.d_res_low 1.65 _reflns_shell.percent_possible_obs ? _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_obs 0.642 _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_redundancy 10.0 _reflns_shell.number_unique_all 921 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1F5B _refine.ls_number_reflns_obs 18542 _refine.ls_number_reflns_all 19082 _refine.pdbx_ls_sigma_I 0.0 _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 372801.63 _refine.pdbx_data_cutoff_low_absF 0.00 _refine.ls_d_res_low 39.16 _refine.ls_d_res_high 1.62 _refine.ls_percent_reflns_obs 97.2 _refine.ls_R_factor_obs 0.207 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.207 _refine.ls_R_factor_R_free 0.244 _refine.ls_R_factor_R_free_error 0.008 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.8 _refine.ls_number_reflns_R_free 899 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean 24.3 _refine.aniso_B[1][1] -0.55 _refine.aniso_B[2][2] -0.55 _refine.aniso_B[3][3] 1.10 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.352 _refine.solvent_model_param_bsol 40.92 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'used maximum likelihood (F)' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh and Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1F5B _refine_analyze.Luzzati_coordinate_error_obs 0.20 _refine_analyze.Luzzati_sigma_a_obs 0.16 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.24 _refine_analyze.Luzzati_sigma_a_free 0.18 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 845 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 15 _refine_hist.number_atoms_solvent 176 _refine_hist.number_atoms_total 1036 _refine_hist.d_res_high 1.62 _refine_hist.d_res_low 39.16 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.005 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.8 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 23.4 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.90 ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 1.62 _refine_ls_shell.d_res_low 1.72 _refine_ls_shell.number_reflns_R_work 2716 _refine_ls_shell.R_factor_R_work 0.343 _refine_ls_shell.percent_reflns_obs 91.7 _refine_ls_shell.R_factor_R_free 0.364 _refine_ls_shell.R_factor_R_free_error 0.031 _refine_ls_shell.percent_reflns_R_free 4.8 _refine_ls_shell.number_reflns_R_free 136 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PROTEIN_REP.PARAM PROTEIN.TOP 'X-RAY DIFFRACTION' 2 WATER_REP.PARAM WATER.TOP 'X-RAY DIFFRACTION' 3 PARAM19X.FS TOPH19.FS 'X-RAY DIFFRACTION' 4 SO4.PAR SO4.TOP 'X-RAY DIFFRACTION' # _struct.entry_id 1F5B _struct.title 'CRYSTAL STRUCTURE OF F2H FERREDOXIN 1 MUTANT FROM AZOTOBACTER VINELANDII AT 1.75 ANGSTROM RESOLUTION' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1F5B _struct_keywords.pdbx_keywords 'ELECTRON TRANSPORT' _struct_keywords.text 'beta-sheet, protein monomer, iron sulfur protein, ferredoxin, ELECTRON TRANSPORT' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 6 ? ILE A 9 ? ASP A 6 ILE A 9 5 ? 4 HELX_P HELX_P2 2 THR A 14 ? CYS A 20 ? THR A 14 CYS A 20 5 ? 7 HELX_P HELX_P3 3 CYS A 45 ? CYS A 49 ? CYS A 45 CYS A 49 5 ? 5 HELX_P HELX_P4 4 ASP A 58 ? VAL A 60 ? ASP A 58 VAL A 60 5 ? 3 HELX_P HELX_P5 5 PRO A 61 ? MET A 64 ? PRO A 61 MET A 64 5 ? 4 HELX_P HELX_P6 6 GLN A 65 ? ALA A 75 ? GLN A 65 ALA A 75 1 ? 11 HELX_P HELX_P7 7 ASP A 90 ? ASP A 95 ? ASP A 90 ASP A 95 1 ? 6 HELX_P HELX_P8 8 GLY A 99 ? LEU A 104 ? GLY A 99 LEU A 104 5 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A CYS 8 SG ? ? ? 1_555 B F3S . FE3 ? ? A CYS 8 A F3S 200 1_555 ? ? ? ? ? ? ? 2.278 ? ? metalc2 metalc ? ? A CYS 16 SG ? ? ? 1_555 B F3S . FE1 ? ? A CYS 16 A F3S 200 1_555 ? ? ? ? ? ? ? 2.275 ? ? metalc3 metalc ? ? A CYS 20 SG ? ? ? 1_555 C SF4 . FE4 ? ? A CYS 20 A SF4 201 1_555 ? ? ? ? ? ? ? 2.293 ? ? metalc4 metalc ? ? A CYS 39 SG ? ? ? 1_555 C SF4 . FE1 ? ? A CYS 39 A SF4 201 1_555 ? ? ? ? ? ? ? 2.285 ? ? metalc5 metalc ? ? A CYS 42 SG ? ? ? 1_555 C SF4 . FE2 ? ? A CYS 42 A SF4 201 1_555 ? ? ? ? ? ? ? 2.297 ? ? metalc6 metalc ? ? A CYS 45 SG ? ? ? 1_555 C SF4 . FE3 ? ? A CYS 45 A SF4 201 1_555 ? ? ? ? ? ? ? 2.284 ? ? metalc7 metalc ? ? A CYS 49 SG ? ? ? 1_555 B F3S . FE4 ? ? A CYS 49 A F3S 200 1_555 ? ? ? ? ? ? ? 2.279 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 HIS A 2 ? VAL A 4 ? HIS A 2 VAL A 4 A 2 ILE A 54 ? SER A 56 ? ILE A 54 SER A 56 B 1 PHE A 25 ? GLU A 27 ? PHE A 25 GLU A 27 B 2 LEU A 32 ? ILE A 34 ? LEU A 32 ILE A 34 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 3 ? N VAL A 3 O PHE A 55 ? O PHE A 55 B 1 2 N TYR A 26 ? N TYR A 26 O VAL A 33 ? O VAL A 33 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A F3S 200 ? 8 'BINDING SITE FOR RESIDUE F3S A 200' AC2 Software A SF4 201 ? 11 'BINDING SITE FOR RESIDUE SF4 A 201' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 8 CYS A 8 ? CYS A 8 . ? 1_555 ? 2 AC1 8 LYS A 12 ? LYS A 12 . ? 1_555 ? 3 AC1 8 TYR A 13 ? TYR A 13 . ? 1_555 ? 4 AC1 8 THR A 14 ? THR A 14 . ? 1_555 ? 5 AC1 8 ASP A 15 ? ASP A 15 . ? 1_555 ? 6 AC1 8 CYS A 16 ? CYS A 16 . ? 1_555 ? 7 AC1 8 LEU A 32 ? LEU A 32 . ? 1_555 ? 8 AC1 8 CYS A 49 ? CYS A 49 . ? 1_555 ? 9 AC2 11 HIS A 2 ? HIS A 2 . ? 1_555 ? 10 AC2 11 CYS A 20 ? CYS A 20 . ? 1_555 ? 11 AC2 11 VAL A 22 ? VAL A 22 . ? 1_555 ? 12 AC2 11 CYS A 24 ? CYS A 24 . ? 1_555 ? 13 AC2 11 PHE A 25 ? PHE A 25 . ? 1_555 ? 14 AC2 11 ILE A 34 ? ILE A 34 . ? 1_555 ? 15 AC2 11 CYS A 39 ? CYS A 39 . ? 1_555 ? 16 AC2 11 ILE A 40 ? ILE A 40 . ? 1_555 ? 17 AC2 11 CYS A 42 ? CYS A 42 . ? 1_555 ? 18 AC2 11 ALA A 43 ? ALA A 43 . ? 1_555 ? 19 AC2 11 CYS A 45 ? CYS A 45 . ? 1_555 ? # _database_PDB_matrix.entry_id 1F5B _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1F5B _atom_sites.fract_transf_matrix[1][1] 0.018057 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018057 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010778 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C FE N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 1 1 ALA ALA A . n A 1 2 HIS 2 2 2 HIS HIS A . n A 1 3 VAL 3 3 3 VAL VAL A . n A 1 4 VAL 4 4 4 VAL VAL A . n A 1 5 THR 5 5 5 THR THR A . n A 1 6 ASP 6 6 6 ASP ASP A . n A 1 7 ASN 7 7 7 ASN ASN A . n A 1 8 CYS 8 8 8 CYS CYS A . n A 1 9 ILE 9 9 9 ILE ILE A . n A 1 10 LYS 10 10 10 LYS LYS A . n A 1 11 CYS 11 11 11 CYS CYS A . n A 1 12 LYS 12 12 12 LYS LYS A . n A 1 13 TYR 13 13 13 TYR TYR A . n A 1 14 THR 14 14 14 THR THR A . n A 1 15 ASP 15 15 15 ASP ASP A . n A 1 16 CYS 16 16 16 CYS CYS A . n A 1 17 VAL 17 17 17 VAL VAL A . n A 1 18 GLU 18 18 18 GLU GLU A . n A 1 19 VAL 19 19 19 VAL VAL A . n A 1 20 CYS 20 20 20 CYS CYS A . n A 1 21 PRO 21 21 21 PRO PRO A . n A 1 22 VAL 22 22 22 VAL VAL A . n A 1 23 ASP 23 23 23 ASP ASP A . n A 1 24 CYS 24 24 24 CYS CYS A . n A 1 25 PHE 25 25 25 PHE PHE A . n A 1 26 TYR 26 26 26 TYR TYR A . n A 1 27 GLU 27 27 27 GLU GLU A . n A 1 28 GLY 28 28 28 GLY GLY A . n A 1 29 PRO 29 29 29 PRO PRO A . n A 1 30 ASN 30 30 30 ASN ASN A . n A 1 31 PHE 31 31 31 PHE PHE A . n A 1 32 LEU 32 32 32 LEU LEU A . n A 1 33 VAL 33 33 33 VAL VAL A . n A 1 34 ILE 34 34 34 ILE ILE A . n A 1 35 HIS 35 35 35 HIS HIS A . n A 1 36 PRO 36 36 36 PRO PRO A . n A 1 37 ASP 37 37 37 ASP ASP A . n A 1 38 GLU 38 38 38 GLU GLU A . n A 1 39 CYS 39 39 39 CYS CYS A . n A 1 40 ILE 40 40 40 ILE ILE A . n A 1 41 ASP 41 41 41 ASP ASP A . n A 1 42 CYS 42 42 42 CYS CYS A . n A 1 43 ALA 43 43 43 ALA ALA A . n A 1 44 LEU 44 44 44 LEU LEU A . n A 1 45 CYS 45 45 45 CYS CYS A . n A 1 46 GLU 46 46 46 GLU GLU A . n A 1 47 PRO 47 47 47 PRO PRO A . n A 1 48 GLU 48 48 48 GLU GLU A . n A 1 49 CYS 49 49 49 CYS CYS A . n A 1 50 PRO 50 50 50 PRO PRO A . n A 1 51 ALA 51 51 51 ALA ALA A . n A 1 52 GLN 52 52 52 GLN GLN A . n A 1 53 ALA 53 53 53 ALA ALA A . n A 1 54 ILE 54 54 54 ILE ILE A . n A 1 55 PHE 55 55 55 PHE PHE A . n A 1 56 SER 56 56 56 SER SER A . n A 1 57 GLU 57 57 57 GLU GLU A . n A 1 58 ASP 58 58 58 ASP ASP A . n A 1 59 GLU 59 59 59 GLU GLU A . n A 1 60 VAL 60 60 60 VAL VAL A . n A 1 61 PRO 61 61 61 PRO PRO A . n A 1 62 GLU 62 62 62 GLU GLU A . n A 1 63 ASP 63 63 63 ASP ASP A . n A 1 64 MET 64 64 64 MET MET A . n A 1 65 GLN 65 65 65 GLN GLN A . n A 1 66 GLU 66 66 66 GLU GLU A . n A 1 67 PHE 67 67 67 PHE PHE A . n A 1 68 ILE 68 68 68 ILE ILE A . n A 1 69 GLN 69 69 69 GLN GLN A . n A 1 70 LEU 70 70 70 LEU LEU A . n A 1 71 ASN 71 71 71 ASN ASN A . n A 1 72 ALA 72 72 72 ALA ALA A . n A 1 73 GLU 73 73 73 GLU GLU A . n A 1 74 LEU 74 74 74 LEU LEU A . n A 1 75 ALA 75 75 75 ALA ALA A . n A 1 76 GLU 76 76 76 GLU GLU A . n A 1 77 VAL 77 77 77 VAL VAL A . n A 1 78 TRP 78 78 78 TRP TRP A . n A 1 79 PRO 79 79 79 PRO PRO A . n A 1 80 ASN 80 80 80 ASN ASN A . n A 1 81 ILE 81 81 81 ILE ILE A . n A 1 82 THR 82 82 82 THR THR A . n A 1 83 GLU 83 83 83 GLU GLU A . n A 1 84 LYS 84 84 84 LYS LYS A . n A 1 85 LYS 85 85 85 LYS LYS A . n A 1 86 ASP 86 86 86 ASP ASP A . n A 1 87 PRO 87 87 87 PRO PRO A . n A 1 88 LEU 88 88 88 LEU LEU A . n A 1 89 PRO 89 89 89 PRO PRO A . n A 1 90 ASP 90 90 90 ASP ASP A . n A 1 91 ALA 91 91 91 ALA ALA A . n A 1 92 GLU 92 92 92 GLU GLU A . n A 1 93 ASP 93 93 93 ASP ASP A . n A 1 94 TRP 94 94 94 TRP TRP A . n A 1 95 ASP 95 95 95 ASP ASP A . n A 1 96 GLY 96 96 96 GLY GLY A . n A 1 97 VAL 97 97 97 VAL VAL A . n A 1 98 LYS 98 98 98 LYS LYS A . n A 1 99 GLY 99 99 99 GLY GLY A . n A 1 100 LYS 100 100 100 LYS LYS A . n A 1 101 LEU 101 101 101 LEU LEU A . n A 1 102 GLN 102 102 102 GLN GLN A . n A 1 103 HIS 103 103 103 HIS HIS A . n A 1 104 LEU 104 104 104 LEU LEU A . n A 1 105 GLU 105 105 105 GLU GLU A . n A 1 106 ARG 106 106 106 ARG ARG A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 F3S 1 200 108 F3S FS3 A . C 3 SF4 1 201 107 SF4 FS4 A . D 4 HOH 1 202 1 HOH HOH A . D 4 HOH 2 203 2 HOH HOH A . D 4 HOH 3 204 3 HOH HOH A . D 4 HOH 4 205 4 HOH HOH A . D 4 HOH 5 206 5 HOH HOH A . D 4 HOH 6 207 6 HOH HOH A . D 4 HOH 7 208 7 HOH HOH A . D 4 HOH 8 209 8 HOH HOH A . D 4 HOH 9 210 9 HOH HOH A . D 4 HOH 10 211 10 HOH HOH A . D 4 HOH 11 212 11 HOH HOH A . D 4 HOH 12 213 12 HOH HOH A . D 4 HOH 13 214 13 HOH HOH A . D 4 HOH 14 215 14 HOH HOH A . D 4 HOH 15 216 15 HOH HOH A . D 4 HOH 16 217 16 HOH HOH A . D 4 HOH 17 218 17 HOH HOH A . D 4 HOH 18 219 18 HOH HOH A . D 4 HOH 19 220 19 HOH HOH A . D 4 HOH 20 221 20 HOH HOH A . D 4 HOH 21 222 21 HOH HOH A . D 4 HOH 22 223 22 HOH HOH A . D 4 HOH 23 224 23 HOH HOH A . D 4 HOH 24 225 24 HOH HOH A . D 4 HOH 25 226 25 HOH HOH A . D 4 HOH 26 227 26 HOH HOH A . D 4 HOH 27 228 27 HOH HOH A . D 4 HOH 28 229 28 HOH HOH A . D 4 HOH 29 230 29 HOH HOH A . D 4 HOH 30 231 30 HOH HOH A . D 4 HOH 31 232 31 HOH HOH A . D 4 HOH 32 233 32 HOH HOH A . D 4 HOH 33 234 33 HOH HOH A . D 4 HOH 34 235 34 HOH HOH A . D 4 HOH 35 236 35 HOH HOH A . D 4 HOH 36 237 36 HOH HOH A . D 4 HOH 37 238 37 HOH HOH A . D 4 HOH 38 239 38 HOH HOH A . D 4 HOH 39 240 39 HOH HOH A . D 4 HOH 40 241 40 HOH HOH A . D 4 HOH 41 242 41 HOH HOH A . D 4 HOH 42 243 42 HOH HOH A . D 4 HOH 43 244 43 HOH HOH A . D 4 HOH 44 245 44 HOH HOH A . D 4 HOH 45 246 45 HOH HOH A . D 4 HOH 46 247 46 HOH HOH A . D 4 HOH 47 248 47 HOH HOH A . D 4 HOH 48 249 48 HOH HOH A . D 4 HOH 49 250 49 HOH HOH A . D 4 HOH 50 251 50 HOH HOH A . D 4 HOH 51 252 51 HOH HOH A . D 4 HOH 52 253 52 HOH HOH A . D 4 HOH 53 254 53 HOH HOH A . D 4 HOH 54 255 54 HOH HOH A . D 4 HOH 55 256 55 HOH HOH A . D 4 HOH 56 257 56 HOH HOH A . D 4 HOH 57 258 57 HOH HOH A . D 4 HOH 58 259 58 HOH HOH A . D 4 HOH 59 260 59 HOH HOH A . D 4 HOH 60 261 60 HOH HOH A . D 4 HOH 61 262 61 HOH HOH A . D 4 HOH 62 263 62 HOH HOH A . D 4 HOH 63 264 63 HOH HOH A . D 4 HOH 64 265 64 HOH HOH A . D 4 HOH 65 266 65 HOH HOH A . D 4 HOH 66 267 66 HOH HOH A . D 4 HOH 67 268 67 HOH HOH A . D 4 HOH 68 269 68 HOH HOH A . D 4 HOH 69 270 69 HOH HOH A . D 4 HOH 70 271 70 HOH HOH A . D 4 HOH 71 272 71 HOH HOH A . D 4 HOH 72 273 72 HOH HOH A . D 4 HOH 73 274 73 HOH HOH A . D 4 HOH 74 275 74 HOH HOH A . D 4 HOH 75 276 75 HOH HOH A . D 4 HOH 76 277 76 HOH HOH A . D 4 HOH 77 278 77 HOH HOH A . D 4 HOH 78 279 78 HOH HOH A . D 4 HOH 79 280 79 HOH HOH A . D 4 HOH 80 281 80 HOH HOH A . D 4 HOH 81 282 81 HOH HOH A . D 4 HOH 82 283 82 HOH HOH A . D 4 HOH 83 284 83 HOH HOH A . D 4 HOH 84 285 84 HOH HOH A . D 4 HOH 85 286 85 HOH HOH A . D 4 HOH 86 287 86 HOH HOH A . D 4 HOH 87 288 87 HOH HOH A . D 4 HOH 88 289 88 HOH HOH A . D 4 HOH 89 290 89 HOH HOH A . D 4 HOH 90 291 90 HOH HOH A . D 4 HOH 91 292 91 HOH HOH A . D 4 HOH 92 293 92 HOH HOH A . D 4 HOH 93 294 93 HOH HOH A . D 4 HOH 94 295 94 HOH HOH A . D 4 HOH 95 296 95 HOH HOH A . D 4 HOH 96 297 96 HOH HOH A . D 4 HOH 97 298 97 HOH HOH A . D 4 HOH 98 299 98 HOH HOH A . D 4 HOH 99 300 99 HOH HOH A . D 4 HOH 100 301 100 HOH HOH A . D 4 HOH 101 302 101 HOH HOH A . D 4 HOH 102 303 102 HOH HOH A . D 4 HOH 103 304 103 HOH HOH A . D 4 HOH 104 305 104 HOH HOH A . D 4 HOH 105 306 105 HOH HOH A . D 4 HOH 106 307 106 HOH HOH A . D 4 HOH 107 308 107 HOH HOH A . D 4 HOH 108 309 108 HOH HOH A . D 4 HOH 109 310 109 HOH HOH A . D 4 HOH 110 311 110 HOH HOH A . D 4 HOH 111 312 111 HOH HOH A . D 4 HOH 112 313 112 HOH HOH A . D 4 HOH 113 314 113 HOH HOH A . D 4 HOH 114 315 114 HOH HOH A . D 4 HOH 115 316 115 HOH HOH A . D 4 HOH 116 317 116 HOH HOH A . D 4 HOH 117 318 117 HOH HOH A . D 4 HOH 118 319 118 HOH HOH A . D 4 HOH 119 320 119 HOH HOH A . D 4 HOH 120 321 120 HOH HOH A . D 4 HOH 121 322 121 HOH HOH A . D 4 HOH 122 323 122 HOH HOH A . D 4 HOH 123 324 123 HOH HOH A . D 4 HOH 124 325 124 HOH HOH A . D 4 HOH 125 326 125 HOH HOH A . D 4 HOH 126 327 126 HOH HOH A . D 4 HOH 127 328 127 HOH HOH A . D 4 HOH 128 329 128 HOH HOH A . D 4 HOH 129 330 129 HOH HOH A . D 4 HOH 130 331 130 HOH HOH A . D 4 HOH 131 332 131 HOH HOH A . D 4 HOH 132 333 132 HOH HOH A . D 4 HOH 133 334 133 HOH HOH A . D 4 HOH 134 335 134 HOH HOH A . D 4 HOH 135 336 135 HOH HOH A . D 4 HOH 136 337 136 HOH HOH A . D 4 HOH 137 338 137 HOH HOH A . D 4 HOH 138 339 138 HOH HOH A . D 4 HOH 139 340 139 HOH HOH A . D 4 HOH 140 341 140 HOH HOH A . D 4 HOH 141 342 141 HOH HOH A . D 4 HOH 142 343 142 HOH HOH A . D 4 HOH 143 344 143 HOH HOH A . D 4 HOH 144 345 144 HOH HOH A . D 4 HOH 145 346 145 HOH HOH A . D 4 HOH 146 347 146 HOH HOH A . D 4 HOH 147 348 147 HOH HOH A . D 4 HOH 148 349 148 HOH HOH A . D 4 HOH 149 350 149 HOH HOH A . D 4 HOH 150 351 150 HOH HOH A . D 4 HOH 151 352 151 HOH HOH A . D 4 HOH 152 353 152 HOH HOH A . D 4 HOH 153 354 153 HOH HOH A . D 4 HOH 154 355 154 HOH HOH A . D 4 HOH 155 356 155 HOH HOH A . D 4 HOH 156 357 156 HOH HOH A . D 4 HOH 157 358 157 HOH HOH A . D 4 HOH 158 359 158 HOH HOH A . D 4 HOH 159 360 159 HOH HOH A . D 4 HOH 160 361 160 HOH HOH A . D 4 HOH 161 362 161 HOH HOH A . D 4 HOH 162 363 162 HOH HOH A . D 4 HOH 163 364 163 HOH HOH A . D 4 HOH 164 365 164 HOH HOH A . D 4 HOH 165 366 165 HOH HOH A . D 4 HOH 166 367 166 HOH HOH A . D 4 HOH 167 368 167 HOH HOH A . D 4 HOH 168 369 168 HOH HOH A . D 4 HOH 169 370 169 HOH HOH A . D 4 HOH 170 371 170 HOH HOH A . D 4 HOH 171 372 171 HOH HOH A . D 4 HOH 172 373 172 HOH HOH A . D 4 HOH 173 374 173 HOH HOH A . D 4 HOH 174 375 174 HOH HOH A . D 4 HOH 175 376 175 HOH HOH A . D 4 HOH 176 377 176 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 8 ? A CYS 8 ? 1_555 FE3 ? B F3S . ? A F3S 200 ? 1_555 S1 ? B F3S . ? A F3S 200 ? 1_555 112.2 ? 2 SG ? A CYS 8 ? A CYS 8 ? 1_555 FE3 ? B F3S . ? A F3S 200 ? 1_555 S3 ? B F3S . ? A F3S 200 ? 1_555 117.2 ? 3 S1 ? B F3S . ? A F3S 200 ? 1_555 FE3 ? B F3S . ? A F3S 200 ? 1_555 S3 ? B F3S . ? A F3S 200 ? 1_555 103.9 ? 4 SG ? A CYS 8 ? A CYS 8 ? 1_555 FE3 ? B F3S . ? A F3S 200 ? 1_555 S4 ? B F3S . ? A F3S 200 ? 1_555 106.8 ? 5 S1 ? B F3S . ? A F3S 200 ? 1_555 FE3 ? B F3S . ? A F3S 200 ? 1_555 S4 ? B F3S . ? A F3S 200 ? 1_555 110.0 ? 6 S3 ? B F3S . ? A F3S 200 ? 1_555 FE3 ? B F3S . ? A F3S 200 ? 1_555 S4 ? B F3S . ? A F3S 200 ? 1_555 106.6 ? 7 SG ? A CYS 16 ? A CYS 16 ? 1_555 FE1 ? B F3S . ? A F3S 200 ? 1_555 S1 ? B F3S . ? A F3S 200 ? 1_555 115.1 ? 8 SG ? A CYS 16 ? A CYS 16 ? 1_555 FE1 ? B F3S . ? A F3S 200 ? 1_555 S2 ? B F3S . ? A F3S 200 ? 1_555 106.6 ? 9 S1 ? B F3S . ? A F3S 200 ? 1_555 FE1 ? B F3S . ? A F3S 200 ? 1_555 S2 ? B F3S . ? A F3S 200 ? 1_555 111.3 ? 10 SG ? A CYS 16 ? A CYS 16 ? 1_555 FE1 ? B F3S . ? A F3S 200 ? 1_555 S3 ? B F3S . ? A F3S 200 ? 1_555 115.3 ? 11 S1 ? B F3S . ? A F3S 200 ? 1_555 FE1 ? B F3S . ? A F3S 200 ? 1_555 S3 ? B F3S . ? A F3S 200 ? 1_555 103.1 ? 12 S2 ? B F3S . ? A F3S 200 ? 1_555 FE1 ? B F3S . ? A F3S 200 ? 1_555 S3 ? B F3S . ? A F3S 200 ? 1_555 105.2 ? 13 SG ? A CYS 20 ? A CYS 20 ? 1_555 FE4 ? C SF4 . ? A SF4 201 ? 1_555 S1 ? C SF4 . ? A SF4 201 ? 1_555 110.5 ? 14 SG ? A CYS 20 ? A CYS 20 ? 1_555 FE4 ? C SF4 . ? A SF4 201 ? 1_555 S2 ? C SF4 . ? A SF4 201 ? 1_555 118.5 ? 15 S1 ? C SF4 . ? A SF4 201 ? 1_555 FE4 ? C SF4 . ? A SF4 201 ? 1_555 S2 ? C SF4 . ? A SF4 201 ? 1_555 103.8 ? 16 SG ? A CYS 20 ? A CYS 20 ? 1_555 FE4 ? C SF4 . ? A SF4 201 ? 1_555 S3 ? C SF4 . ? A SF4 201 ? 1_555 112.7 ? 17 S1 ? C SF4 . ? A SF4 201 ? 1_555 FE4 ? C SF4 . ? A SF4 201 ? 1_555 S3 ? C SF4 . ? A SF4 201 ? 1_555 105.3 ? 18 S2 ? C SF4 . ? A SF4 201 ? 1_555 FE4 ? C SF4 . ? A SF4 201 ? 1_555 S3 ? C SF4 . ? A SF4 201 ? 1_555 105.0 ? 19 SG ? A CYS 39 ? A CYS 39 ? 1_555 FE1 ? C SF4 . ? A SF4 201 ? 1_555 S2 ? C SF4 . ? A SF4 201 ? 1_555 118.1 ? 20 SG ? A CYS 39 ? A CYS 39 ? 1_555 FE1 ? C SF4 . ? A SF4 201 ? 1_555 S3 ? C SF4 . ? A SF4 201 ? 1_555 116.0 ? 21 S2 ? C SF4 . ? A SF4 201 ? 1_555 FE1 ? C SF4 . ? A SF4 201 ? 1_555 S3 ? C SF4 . ? A SF4 201 ? 1_555 105.5 ? 22 SG ? A CYS 39 ? A CYS 39 ? 1_555 FE1 ? C SF4 . ? A SF4 201 ? 1_555 S4 ? C SF4 . ? A SF4 201 ? 1_555 106.4 ? 23 S2 ? C SF4 . ? A SF4 201 ? 1_555 FE1 ? C SF4 . ? A SF4 201 ? 1_555 S4 ? C SF4 . ? A SF4 201 ? 1_555 105.2 ? 24 S3 ? C SF4 . ? A SF4 201 ? 1_555 FE1 ? C SF4 . ? A SF4 201 ? 1_555 S4 ? C SF4 . ? A SF4 201 ? 1_555 104.3 ? 25 SG ? A CYS 42 ? A CYS 42 ? 1_555 FE2 ? C SF4 . ? A SF4 201 ? 1_555 S1 ? C SF4 . ? A SF4 201 ? 1_555 98.8 ? 26 SG ? A CYS 42 ? A CYS 42 ? 1_555 FE2 ? C SF4 . ? A SF4 201 ? 1_555 S3 ? C SF4 . ? A SF4 201 ? 1_555 118.0 ? 27 S1 ? C SF4 . ? A SF4 201 ? 1_555 FE2 ? C SF4 . ? A SF4 201 ? 1_555 S3 ? C SF4 . ? A SF4 201 ? 1_555 105.0 ? 28 SG ? A CYS 42 ? A CYS 42 ? 1_555 FE2 ? C SF4 . ? A SF4 201 ? 1_555 S4 ? C SF4 . ? A SF4 201 ? 1_555 122.6 ? 29 S1 ? C SF4 . ? A SF4 201 ? 1_555 FE2 ? C SF4 . ? A SF4 201 ? 1_555 S4 ? C SF4 . ? A SF4 201 ? 1_555 106.4 ? 30 S3 ? C SF4 . ? A SF4 201 ? 1_555 FE2 ? C SF4 . ? A SF4 201 ? 1_555 S4 ? C SF4 . ? A SF4 201 ? 1_555 104.1 ? 31 SG ? A CYS 45 ? A CYS 45 ? 1_555 FE3 ? C SF4 . ? A SF4 201 ? 1_555 S1 ? C SF4 . ? A SF4 201 ? 1_555 107.1 ? 32 SG ? A CYS 45 ? A CYS 45 ? 1_555 FE3 ? C SF4 . ? A SF4 201 ? 1_555 S2 ? C SF4 . ? A SF4 201 ? 1_555 119.0 ? 33 S1 ? C SF4 . ? A SF4 201 ? 1_555 FE3 ? C SF4 . ? A SF4 201 ? 1_555 S2 ? C SF4 . ? A SF4 201 ? 1_555 103.9 ? 34 SG ? A CYS 45 ? A CYS 45 ? 1_555 FE3 ? C SF4 . ? A SF4 201 ? 1_555 S4 ? C SF4 . ? A SF4 201 ? 1_555 112.7 ? 35 S1 ? C SF4 . ? A SF4 201 ? 1_555 FE3 ? C SF4 . ? A SF4 201 ? 1_555 S4 ? C SF4 . ? A SF4 201 ? 1_555 107.3 ? 36 S2 ? C SF4 . ? A SF4 201 ? 1_555 FE3 ? C SF4 . ? A SF4 201 ? 1_555 S4 ? C SF4 . ? A SF4 201 ? 1_555 105.9 ? 37 SG ? A CYS 49 ? A CYS 49 ? 1_555 FE4 ? B F3S . ? A F3S 200 ? 1_555 S2 ? B F3S . ? A F3S 200 ? 1_555 111.9 ? 38 SG ? A CYS 49 ? A CYS 49 ? 1_555 FE4 ? B F3S . ? A F3S 200 ? 1_555 S3 ? B F3S . ? A F3S 200 ? 1_555 110.4 ? 39 S2 ? B F3S . ? A F3S 200 ? 1_555 FE4 ? B F3S . ? A F3S 200 ? 1_555 S3 ? B F3S . ? A F3S 200 ? 1_555 105.5 ? 40 SG ? A CYS 49 ? A CYS 49 ? 1_555 FE4 ? B F3S . ? A F3S 200 ? 1_555 S4 ? B F3S . ? A F3S 200 ? 1_555 111.9 ? 41 S2 ? B F3S . ? A F3S 200 ? 1_555 FE4 ? B F3S . ? A F3S 200 ? 1_555 S4 ? B F3S . ? A F3S 200 ? 1_555 110.5 ? 42 S3 ? B F3S . ? A F3S 200 ? 1_555 FE4 ? B F3S . ? A F3S 200 ? 1_555 S4 ? B F3S . ? A F3S 200 ? 1_555 106.4 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2000-06-28 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-04 5 'Structure model' 1 4 2021-11-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Refinement description' 4 5 'Structure model' 'Database references' 5 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' database_2 3 5 'Structure model' pdbx_struct_conn_angle 4 5 'Structure model' struct_conn 5 5 'Structure model' struct_ref_seq_dif 6 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 4 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 5 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 6 5 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_atom_id' 7 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 8 5 'Structure model' '_pdbx_struct_conn_angle.value' 9 5 'Structure model' '_struct_conn.pdbx_dist_value' 10 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 11 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 12 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 13 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 14 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 15 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 16 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 17 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 18 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 19 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 20 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 21 5 'Structure model' '_struct_conn.ptnr2_label_seq_id' 22 5 'Structure model' '_struct_ref_seq_dif.details' 23 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 24 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 25 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement 1.0 ? 1 DENZO 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR A 5 ? ? -109.69 -169.15 2 1 ASN A 30 ? ? -141.57 33.79 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'FE3-S4 CLUSTER' F3S 3 'IRON/SULFUR CLUSTER' SF4 4 water HOH #