HEADER TRANSCRIPTION 16-JUL-00 1FBS TITLE HEAT SHOCK TRANSCRIPTION FACTOR DNA BINDING DOMAIN CONTAINING THE TITLE 2 P237A MUTATION COMPND MOL_ID: 1; COMPND 2 MOLECULE: HEAT SHOCK FACTOR PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: HSF DNA BINDING DOMAIN; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: KLUYVEROMYCES LACTIS; SOURCE 3 ORGANISM_TAXID: 28985; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PET3B/PLYSS KEYWDS HELICAL BULGE, HELICAL KINK, HELIX-TURN-HELIX, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR J.A.HARDY,H.C.M.NELSON REVDAT 8 07-FEB-24 1FBS 1 REMARK REVDAT 7 03-NOV-21 1FBS 1 SEQADV REVDAT 6 28-FEB-18 1FBS 1 REMARK REVDAT 5 31-JAN-18 1FBS 1 REMARK REVDAT 4 13-OCT-10 1FBS 1 REMARK REVDAT 3 24-FEB-09 1FBS 1 VERSN REVDAT 2 01-APR-03 1FBS 1 JRNL REVDAT 1 17-JAN-01 1FBS 0 JRNL AUTH J.A.HARDY,H.C.NELSON JRNL TITL PROLINE IN ALPHA-HELICAL KINK IS REQUIRED FOR FOLDING JRNL TITL 2 KINETICS BUT NOT FOR KINKED STRUCTURE, FUNCTION, OR JRNL TITL 3 STABILITY OF HEAT SHOCK TRANSCRIPTION FACTOR. JRNL REF PROTEIN SCI. V. 9 2128 2000 JRNL REFN ISSN 0961-8368 JRNL PMID 11305238 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.73 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 1006742.770 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 90.7 REMARK 3 NUMBER OF REFLECTIONS : 11597 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.237 REMARK 3 FREE R VALUE : 0.280 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.400 REMARK 3 FREE R VALUE TEST SET COUNT : 1201 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.008 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.13 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.90 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 1849 REMARK 3 BIN R VALUE (WORKING SET) : 0.2370 REMARK 3 BIN FREE R VALUE : 0.3110 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 11.70 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 244 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.020 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1486 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 193 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 5.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 11.10 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.01000 REMARK 3 B22 (A**2) : 0.52000 REMARK 3 B33 (A**2) : -0.53000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.26 REMARK 3 ESD FROM SIGMAA (A) : 0.08 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.32 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.17 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.005 REMARK 3 BOND ANGLES (DEGREES) : 1.200 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 21.90 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.550 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.40 REMARK 3 BSOL : 44.95 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1FBS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-JUL-00. REMARK 100 THE DEPOSITION ID IS D_1000011460. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-MAY-96 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL7-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.08 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.05300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.83 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.11 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM CITRATE BUFFER PH 6.0, 26% REMARK 280 POLYETHYLENE GLYCOL AVERAGE MOLECULAR WEIGHT 4000, 200 MM REMARK 280 AMMONIUM ACETATE , VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 4.0K, TEMPERATURE 277.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 28.61000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 31.52500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.61000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 31.52500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A 283 REMARK 465 ALA A 284 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 282 CA C O CB CG CD NE REMARK 470 ARG A 282 CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 219 -114.52 -72.05 REMARK 500 GLU A 221 65.21 26.03 REMARK 500 HIS B 242 63.47 31.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1FBQ RELATED DB: PDB REMARK 900 HSF DNA BINDING DOMAIN CONTAINING THE P237K MUTATION REMARK 900 RELATED ID: 1FBU RELATED DB: PDB REMARK 900 HSF DNA BINDING DOMAIN REMARK 900 RELATED ID: 2HTS RELATED DB: PDB REMARK 900 DNA BINDING DOMAIN OF THE HEAT SHOCK TRANSCRIPTION FACTOR DBREF 1FBS A 195 281 UNP P22121 HSF_KLULA 195 281 DBREF 1FBS B 195 281 UNP P22121 HSF_KLULA 195 281 SEQADV 1FBS ALA A 237 UNP P22121 PRO 237 ENGINEERED MUTATION SEQADV 1FBS ARG A 282 UNP P22121 CLONING ARTIFACT SEQADV 1FBS HIS A 283 UNP P22121 CLONING ARTIFACT SEQADV 1FBS ALA A 284 UNP P22121 CLONING ARTIFACT SEQADV 1FBS ALA B 237 UNP P22121 PRO 237 ENGINEERED MUTATION SEQADV 1FBS ARG B 282 P22121 CLONING ARTIFACT SEQADV 1FBS HIS B 283 P22121 CLONING ARTIFACT SEQADV 1FBS ALA B 284 P22121 CLONING ARTIFACT SEQRES 1 A 90 PRO ALA PHE VAL ASN LYS LEU TRP SER MET VAL ASN ASP SEQRES 2 A 90 LYS SER ASN GLU LYS PHE ILE HIS TRP SER THR SER GLY SEQRES 3 A 90 GLU SER ILE VAL VAL PRO ASN ARG GLU ARG PHE VAL GLN SEQRES 4 A 90 GLU VAL LEU ALA LYS TYR PHE LYS HIS SER ASN PHE ALA SEQRES 5 A 90 SER PHE VAL ARG GLN LEU ASN MET TYR GLY TRP HIS LYS SEQRES 6 A 90 VAL GLN ASP VAL LYS SER GLY SER MET LEU SER ASN ASN SEQRES 7 A 90 ASP SER ARG TRP GLU PHE GLU ASN GLU ARG HIS ALA SEQRES 1 B 90 PRO ALA PHE VAL ASN LYS LEU TRP SER MET VAL ASN ASP SEQRES 2 B 90 LYS SER ASN GLU LYS PHE ILE HIS TRP SER THR SER GLY SEQRES 3 B 90 GLU SER ILE VAL VAL PRO ASN ARG GLU ARG PHE VAL GLN SEQRES 4 B 90 GLU VAL LEU ALA LYS TYR PHE LYS HIS SER ASN PHE ALA SEQRES 5 B 90 SER PHE VAL ARG GLN LEU ASN MET TYR GLY TRP HIS LYS SEQRES 6 B 90 VAL GLN ASP VAL LYS SER GLY SER MET LEU SER ASN ASN SEQRES 7 B 90 ASP SER ARG TRP GLU PHE GLU ASN GLU ARG HIS ALA FORMUL 3 HOH *193(H2 O) HELIX 1 1 PRO A 195 ASN A 206 1 12 HELIX 2 2 ASP A 207 GLU A 211 5 5 HELIX 3 3 ASN A 227 VAL A 235 1 9 HELIX 4 4 VAL A 235 PHE A 240 1 6 HELIX 5 5 ASN A 244 TYR A 255 1 12 HELIX 6 6 PRO B 195 ASN B 206 1 12 HELIX 7 7 ASP B 207 GLU B 211 5 5 HELIX 8 8 ASN B 227 VAL B 235 1 9 HELIX 9 9 VAL B 235 PHE B 240 1 6 HELIX 10 10 ASN B 244 TYR B 255 1 12 SHEET 1 A 4 HIS A 215 TRP A 216 0 SHEET 2 A 4 ILE A 223 VAL A 225 -1 N VAL A 224 O HIS A 215 SHEET 3 A 4 TRP A 276 ASN A 280 -1 O TRP A 276 N VAL A 225 SHEET 4 A 4 TRP A 257 LYS A 259 -1 O HIS A 258 N GLU A 279 SHEET 1 B 4 HIS B 215 TRP B 216 0 SHEET 2 B 4 ILE B 223 VAL B 225 -1 N VAL B 224 O HIS B 215 SHEET 3 B 4 TRP B 276 ASN B 280 -1 O TRP B 276 N VAL B 225 SHEET 4 B 4 TRP B 257 LYS B 259 -1 N HIS B 258 O GLU B 279 CRYST1 57.220 63.050 50.160 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017476 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015860 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019936 0.00000