HEADER ANTIMICROBIAL PEPTIDE 19-JUL-00 1FD4 TITLE HUMAN BETA-DEFENSIN 2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-DEFENSIN 2; COMPND 3 CHAIN: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P; COMPND 4 SYNONYM: HBD-2, SKIN-ANTIMICROBIAL PEPTIDE 1; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 OTHER_DETAILS: THIS PEPTIDE WAS CHEMICALLY SYNTHESIZED. THE SEQUENCE SOURCE 4 OF THIS PEPTIDE OCCURS NATURALLY IN HUMANS (HOMO SAPIENS) KEYWDS DEFENSIN, HUMAN BETA-DEFENSIN 2, BETA-DEFENSIN, ANTIMICROBIAL PEPTIDE EXPDTA X-RAY DIFFRACTION AUTHOR D.M.HOOVER,J.LUBKOWSKI REVDAT 4 03-APR-24 1FD4 1 REMARK REVDAT 3 24-FEB-09 1FD4 1 VERSN REVDAT 2 01-APR-03 1FD4 1 JRNL REVDAT 1 01-NOV-00 1FD4 0 JRNL AUTH D.M.HOOVER,K.R.RAJASHANKAR,R.BLUMENTHAL,A.PURI, JRNL AUTH 2 J.J.OPPENHEIM,O.CHERTOV,J.LUBKOWSKI JRNL TITL THE STRUCTURE OF HUMAN BETA-DEFENSIN-2 SHOWS EVIDENCE OF JRNL TITL 2 HIGHER ORDER OLIGOMERIZATION. JRNL REF J.BIOL.CHEM. V. 275 32911 2000 JRNL REFN ISSN 0021-9258 JRNL PMID 10906336 JRNL DOI 10.1074/JBC.M006098200 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : SHELXL-97 REMARK 3 AUTHORS : G.M.SHELDRICK REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 85.4 REMARK 3 CROSS-VALIDATION METHOD : FREE R REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (NO CUTOFF). REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : 0.187 REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : 0.187 REMARK 3 FREE R VALUE (NO CUTOFF) : 0.263 REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : 11.000 REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : 651 REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : 57662 REMARK 3 REMARK 3 FIT/AGREEMENT OF MODEL FOR DATA WITH F>4SIG(F). REMARK 3 R VALUE (WORKING + TEST SET, F>4SIG(F)) : 0.187 REMARK 3 R VALUE (WORKING SET, F>4SIG(F)) : 0.181 REMARK 3 FREE R VALUE (F>4SIG(F)) : 0.254 REMARK 3 FREE R VALUE TEST SET SIZE (%, F>4SIG(F)) : 11.000 REMARK 3 FREE R VALUE TEST SET COUNT (F>4SIG(F)) : 586 REMARK 3 TOTAL NUMBER OF REFLECTIONS (F>4SIG(F)) : 5189 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4784 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 25 REMARK 3 SOLVENT ATOMS : 806 REMARK 3 REMARK 3 MODEL REFINEMENT. REMARK 3 OCCUPANCY SUM OF NON-HYDROGEN ATOMS : 5615.0 REMARK 3 OCCUPANCY SUM OF HYDROGEN ATOMS : 0.00 REMARK 3 NUMBER OF DISCRETELY DISORDERED RESIDUES : 3 REMARK 3 NUMBER OF LEAST-SQUARES PARAMETERS : 2327 REMARK 3 NUMBER OF RESTRAINTS : 2138 REMARK 3 REMARK 3 RMS DEVIATIONS FROM RESTRAINT TARGET VALUES. REMARK 3 BOND LENGTHS (A) : 0.000 REMARK 3 ANGLE DISTANCES (A) : 0.020 REMARK 3 SIMILAR DISTANCES (NO TARGET VALUES) (A) : 0.000 REMARK 3 DISTANCES FROM RESTRAINT PLANES (A) : 0.444 REMARK 3 ZERO CHIRAL VOLUMES (A**3) : 0.030 REMARK 3 NON-ZERO CHIRAL VOLUMES (A**3) : 0.040 REMARK 3 ANTI-BUMPING DISTANCE RESTRAINTS (A) : 0.010 REMARK 3 RIGID-BOND ADP COMPONENTS (A**2) : 0.000 REMARK 3 SIMILAR ADP COMPONENTS (A**2) : 0.060 REMARK 3 APPROXIMATELY ISOTROPIC ADPS (A**2) : 0.000 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED: NULL REMARK 3 REMARK 3 STEREOCHEMISTRY TARGET VALUES : ENGH AND HUBER REMARK 3 SPECIAL CASE: NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1FD4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-JUL-00. REMARK 100 THE DEPOSITION ID IS D_1000011492. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-OCT-99 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X9B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : SI CRYSTAL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 65644 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.3 REMARK 200 DATA REDUNDANCY : 2.400 REMARK 200 R MERGE (I) : 0.04300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 24.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.76 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.3 REMARK 200 DATA REDUNDANCY IN SHELL : 2.10 REMARK 200 R MERGE FOR SHELL (I) : 0.27300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: HUMAN BETA-DEFESIN-2 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.21 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.00 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 4000, TRIS, LITHIUM SULFATE, PH REMARK 280 8.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 39.97500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4, 5, 6, 7, 8 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A DIMER. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1290 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 4830 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -30.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1010 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 4890 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1450 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 4650 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -24.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1140 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 4770 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 5 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1070 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 4710 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: I, J REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 6 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1000 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 5090 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: K, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 7 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1380 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 4860 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -38.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: M, N REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 8 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1040 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 4930 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -12.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: O, P REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG F 23 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 ARG G 23 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 CYS H 8 CA - CB - SG ANGL. DEV. = 7.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 18 -46.52 73.98 REMARK 500 ARG A 23 -22.76 83.36 REMARK 500 VAL B 18 -48.37 -136.21 REMARK 500 ARG B 23 -17.89 76.05 REMARK 500 VAL C 18 -42.39 -139.29 REMARK 500 ARG C 23 -27.50 77.96 REMARK 500 VAL D 18 -39.99 -133.83 REMARK 500 ARG D 22 44.07 -61.56 REMARK 500 ARG D 23 0.26 -157.40 REMARK 500 VAL E 18 -55.91 65.54 REMARK 500 VAL F 18 -44.76 -132.37 REMARK 500 VAL G 18 -47.36 -136.72 REMARK 500 VAL H 18 -105.17 -136.12 REMARK 500 PRO H 21 -120.24 -57.33 REMARK 500 ARG H 22 -93.12 -98.11 REMARK 500 LYS H 39 -160.96 -162.02 REMARK 500 VAL I 18 -47.16 64.70 REMARK 500 VAL J 18 -43.82 -140.08 REMARK 500 ARG J 22 87.03 -69.00 REMARK 500 ARG J 23 -12.96 176.87 REMARK 500 VAL K 18 -51.89 -137.40 REMARK 500 ARG K 23 -14.15 81.77 REMARK 500 VAL L 18 -48.61 -131.27 REMARK 500 ARG L 23 -36.69 85.62 REMARK 500 VAL M 18 -47.14 64.69 REMARK 500 ARG M 22 132.03 -37.43 REMARK 500 ARG M 23 -19.52 81.72 REMARK 500 VAL N 18 -47.51 -136.28 REMARK 500 VAL O 18 -52.25 -133.44 REMARK 500 ARG O 23 -23.19 92.08 REMARK 500 VAL P 18 -40.71 -134.98 REMARK 500 PRO P 21 -168.84 -65.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 M 807 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 F 808 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 I 809 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 I 810 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 811 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1FD3 RELATED DB: PDB REMARK 900 HUMAN BETA-DEFENSIN 2, ORTHORHOMBIC DBREF 1FD4 A 1 41 UNP O15263 BD02_HUMAN 24 64 DBREF 1FD4 B 1 41 UNP O15263 BD02_HUMAN 24 64 DBREF 1FD4 C 1 41 UNP O15263 BD02_HUMAN 24 64 DBREF 1FD4 D 1 41 UNP O15263 BD02_HUMAN 24 64 DBREF 1FD4 E 1 41 UNP O15263 BD02_HUMAN 24 64 DBREF 1FD4 F 1 41 UNP O15263 BD02_HUMAN 24 64 DBREF 1FD4 G 1 41 UNP O15263 BD02_HUMAN 24 64 DBREF 1FD4 H 1 41 UNP O15263 BD02_HUMAN 24 64 DBREF 1FD4 I 1 41 UNP O15263 BD02_HUMAN 24 64 DBREF 1FD4 J 1 41 UNP O15263 BD02_HUMAN 24 64 DBREF 1FD4 K 1 41 UNP O15263 BD02_HUMAN 24 64 DBREF 1FD4 L 1 41 UNP O15263 BD02_HUMAN 24 64 DBREF 1FD4 M 1 41 UNP O15263 BD02_HUMAN 24 64 DBREF 1FD4 N 1 41 UNP O15263 BD02_HUMAN 24 64 DBREF 1FD4 O 1 41 UNP O15263 BD02_HUMAN 24 64 DBREF 1FD4 P 1 41 UNP O15263 BD02_HUMAN 24 64 SEQRES 1 A 41 GLY ILE GLY ASP PRO VAL THR CYS LEU LYS SER GLY ALA SEQRES 2 A 41 ILE CYS HIS PRO VAL PHE CYS PRO ARG ARG TYR LYS GLN SEQRES 3 A 41 ILE GLY THR CYS GLY LEU PRO GLY THR LYS CYS CYS LYS SEQRES 4 A 41 LYS PRO SEQRES 1 B 41 GLY ILE GLY ASP PRO VAL THR CYS LEU LYS SER GLY ALA SEQRES 2 B 41 ILE CYS HIS PRO VAL PHE CYS PRO ARG ARG TYR LYS GLN SEQRES 3 B 41 ILE GLY THR CYS GLY LEU PRO GLY THR LYS CYS CYS LYS SEQRES 4 B 41 LYS PRO SEQRES 1 C 41 GLY ILE GLY ASP PRO VAL THR CYS LEU LYS SER GLY ALA SEQRES 2 C 41 ILE CYS HIS PRO VAL PHE CYS PRO ARG ARG TYR LYS GLN SEQRES 3 C 41 ILE GLY THR CYS GLY LEU PRO GLY THR LYS CYS CYS LYS SEQRES 4 C 41 LYS PRO SEQRES 1 D 41 GLY ILE GLY ASP PRO VAL THR CYS LEU LYS SER GLY ALA SEQRES 2 D 41 ILE CYS HIS PRO VAL PHE CYS PRO ARG ARG TYR LYS GLN SEQRES 3 D 41 ILE GLY THR CYS GLY LEU PRO GLY THR LYS CYS CYS LYS SEQRES 4 D 41 LYS PRO SEQRES 1 E 41 GLY ILE GLY ASP PRO VAL THR CYS LEU LYS SER GLY ALA SEQRES 2 E 41 ILE CYS HIS PRO VAL PHE CYS PRO ARG ARG TYR LYS GLN SEQRES 3 E 41 ILE GLY THR CYS GLY LEU PRO GLY THR LYS CYS CYS LYS SEQRES 4 E 41 LYS PRO SEQRES 1 F 41 GLY ILE GLY ASP PRO VAL THR CYS LEU LYS SER GLY ALA SEQRES 2 F 41 ILE CYS HIS PRO VAL PHE CYS PRO ARG ARG TYR LYS GLN SEQRES 3 F 41 ILE GLY THR CYS GLY LEU PRO GLY THR LYS CYS CYS LYS SEQRES 4 F 41 LYS PRO SEQRES 1 G 41 GLY ILE GLY ASP PRO VAL THR CYS LEU LYS SER GLY ALA SEQRES 2 G 41 ILE CYS HIS PRO VAL PHE CYS PRO ARG ARG TYR LYS GLN SEQRES 3 G 41 ILE GLY THR CYS GLY LEU PRO GLY THR LYS CYS CYS LYS SEQRES 4 G 41 LYS PRO SEQRES 1 H 41 GLY ILE GLY ASP PRO VAL THR CYS LEU LYS SER GLY ALA SEQRES 2 H 41 ILE CYS HIS PRO VAL PHE CYS PRO ARG ARG TYR LYS GLN SEQRES 3 H 41 ILE GLY THR CYS GLY LEU PRO GLY THR LYS CYS CYS LYS SEQRES 4 H 41 LYS PRO SEQRES 1 I 41 GLY ILE GLY ASP PRO VAL THR CYS LEU LYS SER GLY ALA SEQRES 2 I 41 ILE CYS HIS PRO VAL PHE CYS PRO ARG ARG TYR LYS GLN SEQRES 3 I 41 ILE GLY THR CYS GLY LEU PRO GLY THR LYS CYS CYS LYS SEQRES 4 I 41 LYS PRO SEQRES 1 J 41 GLY ILE GLY ASP PRO VAL THR CYS LEU LYS SER GLY ALA SEQRES 2 J 41 ILE CYS HIS PRO VAL PHE CYS PRO ARG ARG TYR LYS GLN SEQRES 3 J 41 ILE GLY THR CYS GLY LEU PRO GLY THR LYS CYS CYS LYS SEQRES 4 J 41 LYS PRO SEQRES 1 K 41 GLY ILE GLY ASP PRO VAL THR CYS LEU LYS SER GLY ALA SEQRES 2 K 41 ILE CYS HIS PRO VAL PHE CYS PRO ARG ARG TYR LYS GLN SEQRES 3 K 41 ILE GLY THR CYS GLY LEU PRO GLY THR LYS CYS CYS LYS SEQRES 4 K 41 LYS PRO SEQRES 1 L 41 GLY ILE GLY ASP PRO VAL THR CYS LEU LYS SER GLY ALA SEQRES 2 L 41 ILE CYS HIS PRO VAL PHE CYS PRO ARG ARG TYR LYS GLN SEQRES 3 L 41 ILE GLY THR CYS GLY LEU PRO GLY THR LYS CYS CYS LYS SEQRES 4 L 41 LYS PRO SEQRES 1 M 41 GLY ILE GLY ASP PRO VAL THR CYS LEU LYS SER GLY ALA SEQRES 2 M 41 ILE CYS HIS PRO VAL PHE CYS PRO ARG ARG TYR LYS GLN SEQRES 3 M 41 ILE GLY THR CYS GLY LEU PRO GLY THR LYS CYS CYS LYS SEQRES 4 M 41 LYS PRO SEQRES 1 N 41 GLY ILE GLY ASP PRO VAL THR CYS LEU LYS SER GLY ALA SEQRES 2 N 41 ILE CYS HIS PRO VAL PHE CYS PRO ARG ARG TYR LYS GLN SEQRES 3 N 41 ILE GLY THR CYS GLY LEU PRO GLY THR LYS CYS CYS LYS SEQRES 4 N 41 LYS PRO SEQRES 1 O 41 GLY ILE GLY ASP PRO VAL THR CYS LEU LYS SER GLY ALA SEQRES 2 O 41 ILE CYS HIS PRO VAL PHE CYS PRO ARG ARG TYR LYS GLN SEQRES 3 O 41 ILE GLY THR CYS GLY LEU PRO GLY THR LYS CYS CYS LYS SEQRES 4 O 41 LYS PRO SEQRES 1 P 41 GLY ILE GLY ASP PRO VAL THR CYS LEU LYS SER GLY ALA SEQRES 2 P 41 ILE CYS HIS PRO VAL PHE CYS PRO ARG ARG TYR LYS GLN SEQRES 3 P 41 ILE GLY THR CYS GLY LEU PRO GLY THR LYS CYS CYS LYS SEQRES 4 P 41 LYS PRO HET SO4 A 811 5 HET SO4 F 808 5 HET SO4 I 809 5 HET SO4 I 810 5 HET SO4 M 807 5 HETNAM SO4 SULFATE ION FORMUL 17 SO4 5(O4 S 2-) FORMUL 22 HOH *806(H2 O) HELIX 1 1 ASP A 4 SER A 11 1 8 HELIX 2 2 ASP B 4 SER B 11 1 8 HELIX 3 3 ASP C 4 SER C 11 1 8 HELIX 4 4 ASP D 4 SER D 11 1 8 HELIX 5 5 ASP E 4 SER E 11 1 8 HELIX 6 6 ASP F 4 SER F 11 1 8 HELIX 7 7 ASP G 4 SER G 11 1 8 HELIX 8 8 ASP H 4 GLY H 12 1 9 HELIX 9 9 ASP I 4 SER I 11 1 8 HELIX 10 10 ASP J 4 SER J 11 1 8 HELIX 11 11 ASP K 4 SER K 11 1 8 HELIX 12 12 ASP L 4 SER L 11 1 8 HELIX 13 13 ASP M 4 SER M 11 1 8 HELIX 14 14 ASP N 4 SER N 11 1 8 HELIX 15 15 ASP O 4 SER O 11 1 8 HELIX 16 16 ASP P 4 SER P 11 1 8 SHEET 1 A 4 ILE A 2 GLY A 3 0 SHEET 2 A 4 LYS A 25 THR A 29 1 O ILE A 27 N ILE A 2 SHEET 3 A 4 THR A 35 LYS A 39 -1 O CYS A 37 N ILE A 27 SHEET 4 A 4 ILE A 14 PRO A 17 -1 N ILE A 14 O CYS A 38 SHEET 1 B 3 ILE B 14 HIS B 16 0 SHEET 2 B 3 LYS B 36 LYS B 39 -1 N LYS B 36 O HIS B 16 SHEET 3 B 3 LYS B 25 GLY B 28 -1 N LYS B 25 O LYS B 39 SHEET 1 C 3 ILE C 14 HIS C 16 0 SHEET 2 C 3 LYS C 36 LYS C 39 -1 O LYS C 36 N HIS C 16 SHEET 3 C 3 LYS C 25 GLY C 28 -1 O LYS C 25 N LYS C 39 SHEET 1 D 3 ILE D 14 HIS D 16 0 SHEET 2 D 3 LYS D 36 LYS D 39 -1 N LYS D 36 O HIS D 16 SHEET 3 D 3 LYS D 25 THR D 29 -1 N LYS D 25 O LYS D 39 SHEET 1 E 4 ILE E 2 GLY E 3 0 SHEET 2 E 4 LYS E 25 THR E 29 1 O ILE E 27 N ILE E 2 SHEET 3 E 4 LYS E 36 LYS E 39 -1 O CYS E 37 N ILE E 27 SHEET 4 E 4 ILE E 14 HIS E 16 -1 O ILE E 14 N CYS E 38 SHEET 1 F 3 ILE F 14 HIS F 16 0 SHEET 2 F 3 LYS F 36 LYS F 39 -1 O LYS F 36 N HIS F 16 SHEET 3 F 3 LYS F 25 THR F 29 -1 N LYS F 25 O LYS F 39 SHEET 1 G 4 ILE G 2 GLY G 3 0 SHEET 2 G 4 LYS G 25 THR G 29 1 O ILE G 27 N ILE G 2 SHEET 3 G 4 LYS G 36 LYS G 39 -1 O CYS G 37 N ILE G 27 SHEET 4 G 4 ILE G 14 HIS G 16 -1 N ILE G 14 O CYS G 38 SHEET 1 H 3 ILE H 14 HIS H 16 0 SHEET 2 H 3 LYS H 36 LYS H 39 -1 O LYS H 36 N HIS H 16 SHEET 3 H 3 LYS H 25 GLY H 28 -1 N LYS H 25 O LYS H 39 SHEET 1 I 4 ILE I 2 GLY I 3 0 SHEET 2 I 4 LYS I 25 THR I 29 1 O ILE I 27 N ILE I 2 SHEET 3 I 4 LYS I 36 LYS I 39 -1 O CYS I 37 N ILE I 27 SHEET 4 I 4 ILE I 14 HIS I 16 -1 O ILE I 14 N CYS I 38 SHEET 1 J 3 ILE J 14 HIS J 16 0 SHEET 2 J 3 LYS J 36 LYS J 39 -1 O LYS J 36 N HIS J 16 SHEET 3 J 3 LYS J 25 GLY J 28 -1 N LYS J 25 O LYS J 39 SHEET 1 K 3 ILE K 14 HIS K 16 0 SHEET 2 K 3 LYS K 36 LYS K 39 -1 N LYS K 36 O HIS K 16 SHEET 3 K 3 LYS K 25 GLY K 28 -1 O LYS K 25 N LYS K 39 SHEET 1 L 3 ILE L 14 HIS L 16 0 SHEET 2 L 3 LYS L 36 LYS L 39 -1 N LYS L 36 O HIS L 16 SHEET 3 L 3 LYS L 25 GLY L 28 -1 N LYS L 25 O LYS L 39 SHEET 1 M 4 ILE M 2 GLY M 3 0 SHEET 2 M 4 LYS M 25 THR M 29 1 O ILE M 27 N ILE M 2 SHEET 3 M 4 THR M 35 LYS M 39 -1 O CYS M 37 N ILE M 27 SHEET 4 M 4 ILE M 14 PRO M 17 -1 N ILE M 14 O CYS M 38 SHEET 1 N 4 ILE N 2 GLY N 3 0 SHEET 2 N 4 LYS N 25 THR N 29 1 O ILE N 27 N ILE N 2 SHEET 3 N 4 LYS N 36 LYS N 39 -1 O CYS N 37 N ILE N 27 SHEET 4 N 4 ILE N 14 HIS N 16 -1 O ILE N 14 N CYS N 38 SHEET 1 O 3 ILE O 14 HIS O 16 0 SHEET 2 O 3 LYS O 36 LYS O 39 -1 O LYS O 36 N HIS O 16 SHEET 3 O 3 LYS O 25 GLY O 28 -1 O LYS O 25 N LYS O 39 SHEET 1 P 3 ILE P 14 HIS P 16 0 SHEET 2 P 3 LYS P 36 LYS P 39 -1 N LYS P 36 O HIS P 16 SHEET 3 P 3 LYS P 25 GLY P 28 -1 O LYS P 25 N LYS P 39 SSBOND 1 CYS A 8 CYS A 37 1555 1555 2.06 SSBOND 2 CYS A 15 CYS A 30 1555 1555 2.05 SSBOND 3 CYS A 20 CYS A 38 1555 1555 2.04 SSBOND 4 CYS B 8 CYS B 37 1555 1555 2.04 SSBOND 5 CYS B 15 CYS B 30 1555 1555 2.06 SSBOND 6 CYS B 20 CYS B 38 1555 1555 2.04 SSBOND 7 CYS C 8 CYS C 37 1555 1555 2.03 SSBOND 8 CYS C 15 CYS C 30 1555 1555 2.02 SSBOND 9 CYS C 20 CYS C 38 1555 1555 2.03 SSBOND 10 CYS D 8 CYS D 37 1555 1555 2.05 SSBOND 11 CYS D 15 CYS D 30 1555 1555 2.04 SSBOND 12 CYS D 20 CYS D 38 1555 1555 2.04 SSBOND 13 CYS E 8 CYS E 37 1555 1555 2.05 SSBOND 14 CYS E 15 CYS E 30 1555 1555 2.04 SSBOND 15 CYS E 20 CYS E 38 1555 1555 2.03 SSBOND 16 CYS F 8 CYS F 37 1555 1555 2.03 SSBOND 17 CYS F 15 CYS F 30 1555 1555 2.05 SSBOND 18 CYS F 20 CYS F 38 1555 1555 2.01 SSBOND 19 CYS G 8 CYS G 37 1555 1555 2.05 SSBOND 20 CYS G 15 CYS G 30 1555 1555 2.03 SSBOND 21 CYS G 20 CYS G 38 1555 1555 2.03 SSBOND 22 CYS H 8 CYS H 37 1555 1555 2.03 SSBOND 23 CYS H 15 CYS H 30 1555 1555 2.04 SSBOND 24 CYS H 20 CYS H 38 1555 1555 2.03 SSBOND 25 CYS I 8 CYS I 37 1555 1555 2.03 SSBOND 26 CYS I 15 CYS I 30 1555 1555 2.05 SSBOND 27 CYS I 20 CYS I 38 1555 1555 2.03 SSBOND 28 CYS J 8 CYS J 37 1555 1555 2.03 SSBOND 29 CYS J 15 CYS J 30 1555 1555 2.03 SSBOND 30 CYS J 20 CYS J 38 1555 1555 2.04 SSBOND 31 CYS K 8 CYS K 37 1555 1555 2.03 SSBOND 32 CYS K 15 CYS K 30 1555 1555 2.03 SSBOND 33 CYS K 20 CYS K 38 1555 1555 2.03 SSBOND 34 CYS L 8 CYS L 37 1555 1555 2.06 SSBOND 35 CYS L 15 CYS L 30 1555 1555 2.03 SSBOND 36 CYS L 20 CYS L 38 1555 1555 2.05 SSBOND 37 CYS M 8 CYS M 37 1555 1555 2.07 SSBOND 38 CYS M 15 CYS M 30 1555 1555 2.03 SSBOND 39 CYS M 20 CYS M 38 1555 1555 2.03 SSBOND 40 CYS N 8 CYS N 37 1555 1555 2.03 SSBOND 41 CYS N 15 CYS N 30 1555 1555 2.04 SSBOND 42 CYS N 20 CYS N 38 1555 1555 2.03 SSBOND 43 CYS O 8 CYS O 37 1555 1555 2.03 SSBOND 44 CYS O 15 CYS O 30 1555 1555 2.00 SSBOND 45 CYS O 20 CYS O 38 1555 1555 2.03 SSBOND 46 CYS P 8 CYS P 37 1555 1555 2.04 SSBOND 47 CYS P 15 CYS P 30 1555 1555 2.04 SSBOND 48 CYS P 20 CYS P 38 1555 1555 2.04 SITE 1 AC1 8 ARG I 22 SO4 I 810 HOH I 846 HOH I 859 SITE 2 AC1 8 TYR M 24 LYS M 40 HOH M 844 HOH N 88 SITE 1 AC2 7 ARG E 23 ARG F 23 TYR F 24 LYS F 40 SITE 2 AC2 7 HOH F 828 HOH F 843 HOH F 854 SITE 1 AC3 8 ARG I 22 HOH I 821 HOH I 829 HOH I 831 SITE 2 AC3 8 HOH I 859 PRO N 21 ARG N 22 ARG N 23 SITE 1 AC4 7 ARG I 22 HOH I 830 HOH I 864 LYS M 40 SITE 2 AC4 7 SO4 M 807 HOH M 829 HOH M 833 SITE 1 AC5 3 CYS A 20 LYS A 25 GLN A 26 CRYST1 54.525 79.950 74.271 90.00 105.30 90.00 P 1 21 1 32 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018340 0.000000 0.005017 0.00000 SCALE2 0.000000 0.012508 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013959 0.00000