HEADER VIRAL PROTEIN 28-MAY-97 1FDM TITLE FD MAJOR COAT PROTEIN IN SDS MICELLES, NMR, 20 STRUCTURES COMPND MOL_ID: 1; COMPND 2 MOLECULE: FD MAJOR COAT PROTEIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: FD COAT PROTEIN; COMPND 5 OTHER_DETAILS: IN SDS MICELLES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROBACTERIA PHAGE FD; SOURCE 3 ORGANISM_TAXID: 10864 KEYWDS FD COAT PROTEIN, MEMBRANE PROTEIN, MICELLES, COAT PROTEIN, VIRAL KEYWDS 2 PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR F.C.L.ALMEIDA,S.J.OPELLA REVDAT 3 23-FEB-22 1FDM 1 REMARK REVDAT 2 24-FEB-09 1FDM 1 VERSN REVDAT 1 17-SEP-97 1FDM 0 JRNL AUTH F.C.ALMEIDA,S.J.OPELLA JRNL TITL FD COAT PROTEIN STRUCTURE IN MEMBRANE ENVIRONMENTS: JRNL TITL 2 STRUCTURAL DYNAMICS OF THE LOOP BETWEEN THE HYDROPHOBIC JRNL TITL 3 TRANS-MEMBRANE HELIX AND THE AMPHIPATHIC IN-PLANE HELIX. JRNL REF J.MOL.BIOL. V. 270 481 1997 JRNL REFN ISSN 0022-2836 JRNL PMID 9237913 JRNL DOI 10.1006/JMBI.1997.1114 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.1 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REFINEMENT DETAILS CAN BE FOUND IN THE REMARK 3 PAPER CITED ON JRNL RECORDS ABOVE. REMARK 4 REMARK 4 1FDM COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000173247. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 308 REMARK 210 PH : 4.0 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : NULL REMARK 210 SAMPLE CONTENTS : NULL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D NOESY-TOCSY-HNHA-D2O EXCHANGE REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ; 600 MHZ; 750 MHZ REMARK 210 SPECTROMETER MODEL : DMX500; DMX600; DMX750 REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : X-PLOR REMARK 210 METHOD USED : DISTANCE GEOMETRY-SIMULATED REMARK 210 ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 220 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : 10 LOWEST ENERGY FOR EACH FAMILY REMARK 210 OF STRUCTURE REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASP A 5 153.49 59.13 REMARK 500 1 SER A 13 -74.83 -80.17 REMARK 500 1 ALA A 16 -82.94 -50.52 REMARK 500 1 ALA A 18 -92.47 -125.90 REMARK 500 1 THR A 19 -58.49 -176.31 REMARK 500 1 GLU A 20 -104.10 -52.06 REMARK 500 1 TYR A 24 38.10 178.08 REMARK 500 1 TRP A 26 -30.28 -35.84 REMARK 500 1 ALA A 27 -68.60 -130.83 REMARK 500 1 LYS A 40 -76.98 -73.90 REMARK 500 1 PHE A 45 32.45 -175.51 REMARK 500 1 SER A 47 -89.63 161.00 REMARK 500 1 ALA A 49 27.22 -168.48 REMARK 500 2 PRO A 6 -77.16 -78.66 REMARK 500 2 SER A 13 -77.04 -74.91 REMARK 500 2 ALA A 16 -88.02 -46.42 REMARK 500 2 ALA A 18 -90.12 -111.81 REMARK 500 2 THR A 19 -55.22 176.43 REMARK 500 2 GLU A 20 -108.43 -57.40 REMARK 500 2 ALA A 25 -35.28 -131.07 REMARK 500 2 SER A 47 -153.85 -97.79 REMARK 500 3 PRO A 6 41.22 -80.37 REMARK 500 3 ALA A 7 -69.40 -153.40 REMARK 500 3 ALA A 9 -80.22 -55.29 REMARK 500 3 SER A 13 -76.68 -69.34 REMARK 500 3 SER A 17 45.07 -83.01 REMARK 500 3 ALA A 18 34.86 37.55 REMARK 500 3 GLU A 20 -64.46 -176.89 REMARK 500 3 TYR A 24 39.36 32.28 REMARK 500 3 ALA A 27 -64.23 -133.63 REMARK 500 3 LYS A 40 -70.66 -79.10 REMARK 500 3 SER A 47 -60.55 -109.87 REMARK 500 4 GLU A 2 -179.36 57.40 REMARK 500 4 ASP A 4 84.01 -166.75 REMARK 500 4 SER A 13 -76.19 -76.27 REMARK 500 4 ALA A 16 -82.49 -48.93 REMARK 500 4 ALA A 18 -90.80 -107.42 REMARK 500 4 THR A 19 -53.20 175.34 REMARK 500 4 GLU A 20 -100.47 -49.56 REMARK 500 4 TYR A 24 51.02 37.25 REMARK 500 4 TRP A 26 -27.90 -37.35 REMARK 500 4 ALA A 27 -65.92 -129.49 REMARK 500 4 THR A 46 40.59 178.09 REMARK 500 4 SER A 47 -72.32 -166.71 REMARK 500 4 ALA A 49 -75.59 -126.50 REMARK 500 5 GLU A 2 -164.65 59.92 REMARK 500 5 ASP A 4 96.01 50.91 REMARK 500 5 ASP A 5 100.82 -160.29 REMARK 500 5 ALA A 7 -26.48 172.38 REMARK 500 5 LYS A 8 -33.07 -39.64 REMARK 500 REMARK 500 THIS ENTRY HAS 229 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL DBREF 1FDM A 1 50 UNP P69539 COATB_BPFD 24 73 SEQRES 1 A 50 ALA GLU GLY ASP ASP PRO ALA LYS ALA ALA PHE ASP SER SEQRES 2 A 50 LEU GLN ALA SER ALA THR GLU TYR ILE GLY TYR ALA TRP SEQRES 3 A 50 ALA MET VAL VAL VAL ILE VAL GLY ALA THR ILE GLY ILE SEQRES 4 A 50 LYS LEU PHE LYS LYS PHE THR SER LYS ALA SER HELIX 1 1 LYS A 8 ALA A 16 1 9 HELIX 2 2 MET A 28 LYS A 43 1 16 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1