data_1FFI # _entry.id 1FFI # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1FFI pdb_00001ffi 10.2210/pdb1ffi/pdb RCSB RCSB011540 ? ? WWPDB D_1000011540 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2001-06-01 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2012-05-09 5 'Structure model' 1 4 2013-02-27 6 'Structure model' 1 5 2021-11-03 7 'Structure model' 1 6 2024-02-07 8 'Structure model' 1 7 2024-03-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Atomic model' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Non-polymer description' 6 3 'Structure model' 'Structure summary' 7 3 'Structure model' 'Version format compliance' 8 4 'Structure model' 'Non-polymer description' 9 5 'Structure model' Other 10 6 'Structure model' 'Database references' 11 6 'Structure model' 'Derived calculations' 12 7 'Structure model' 'Data collection' 13 8 'Structure model' 'Source and taxonomy' 14 8 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 6 'Structure model' database_2 2 6 'Structure model' struct_ref_seq_dif 3 6 'Structure model' struct_site 4 7 'Structure model' chem_comp_atom 5 7 'Structure model' chem_comp_bond 6 8 'Structure model' entity 7 8 'Structure model' pdbx_entity_src_syn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 6 'Structure model' '_database_2.pdbx_DOI' 2 6 'Structure model' '_database_2.pdbx_database_accession' 3 6 'Structure model' '_struct_ref_seq_dif.details' 4 6 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 6 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 6 'Structure model' '_struct_site.pdbx_auth_seq_id' 7 8 'Structure model' '_entity.details' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1FFI _pdbx_database_status.recvd_initial_deposition_date 2000-07-25 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry . _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1a94 . unspecified PDB 1daz . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Mahalingam, B.' 1 'Louis, J.M.' 2 'Harrison, R.W.' 3 'Weber, I.T.' 4 # _citation.id primary _citation.title ;Structural implications of drug-resistant mutants of HIV-1 protease: high-resolution crystal structures of the mutant protease/substrate analogue complexes. ; _citation.journal_abbrev Proteins _citation.journal_volume 43 _citation.page_first 455 _citation.page_last 464 _citation.year 2001 _citation.journal_id_ASTM PSFGEY _citation.country US _citation.journal_id_ISSN 0887-3585 _citation.journal_id_CSD 0867 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 11340661 _citation.pdbx_database_id_DOI 10.1002/prot.1057 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Mahalingam, B.' 1 ? primary 'Louis, J.M.' 2 ? primary 'Hung, J.' 3 ? primary 'Harrison, R.W.' 4 ? primary 'Weber, I.T.' 5 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'PROTEASE RETROPEPSIN' 10739.691 2 3.4.23.16 D30N ? ? 2 non-polymer syn 'N-{(2S)-2-[(N-acetyl-L-threonyl-L-isoleucyl)amino]hexyl}-L-norleucyl-L-glutaminyl-N~5~-[amino(iminio)methyl]-L-ornithinamide' 770.983 1 ? ? ? 'SEQUENCE ANALOGOUS TO THE p2-NC PROCESSING SITE IN HIV-1' 3 water nat water 18.015 117 ? ? ? ? # _entity_name_sys.entity_id 1 _entity_name_sys.name E.C.3.4.23.16 # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;PQITLWKRPLVTIKIGGQLKEALLDTGADNTVIEEMSLPGRWKPKMIGGIGGFIKVRQYDQIIIEIAGHKAIGTVLVGPT PVNIIGRNLLTQIGATLNF ; _entity_poly.pdbx_seq_one_letter_code_can ;PQITLWKRPLVTIKIGGQLKEALLDTGADNTVIEEMSLPGRWKPKMIGGIGGFIKVRQYDQIIIEIAGHKAIGTVLVGPT PVNIIGRNLLTQIGATLNF ; _entity_poly.pdbx_strand_id C,D _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'N-{(2S)-2-[(N-acetyl-L-threonyl-L-isoleucyl)amino]hexyl}-L-norleucyl-L-glutaminyl-N~5~-[amino(iminio)methyl]-L-ornithinamide' 2NC 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 PRO n 1 2 GLN n 1 3 ILE n 1 4 THR n 1 5 LEU n 1 6 TRP n 1 7 LYS n 1 8 ARG n 1 9 PRO n 1 10 LEU n 1 11 VAL n 1 12 THR n 1 13 ILE n 1 14 LYS n 1 15 ILE n 1 16 GLY n 1 17 GLY n 1 18 GLN n 1 19 LEU n 1 20 LYS n 1 21 GLU n 1 22 ALA n 1 23 LEU n 1 24 LEU n 1 25 ASP n 1 26 THR n 1 27 GLY n 1 28 ALA n 1 29 ASP n 1 30 ASN n 1 31 THR n 1 32 VAL n 1 33 ILE n 1 34 GLU n 1 35 GLU n 1 36 MET n 1 37 SER n 1 38 LEU n 1 39 PRO n 1 40 GLY n 1 41 ARG n 1 42 TRP n 1 43 LYS n 1 44 PRO n 1 45 LYS n 1 46 MET n 1 47 ILE n 1 48 GLY n 1 49 GLY n 1 50 ILE n 1 51 GLY n 1 52 GLY n 1 53 PHE n 1 54 ILE n 1 55 LYS n 1 56 VAL n 1 57 ARG n 1 58 GLN n 1 59 TYR n 1 60 ASP n 1 61 GLN n 1 62 ILE n 1 63 ILE n 1 64 ILE n 1 65 GLU n 1 66 ILE n 1 67 ALA n 1 68 GLY n 1 69 HIS n 1 70 LYS n 1 71 ALA n 1 72 ILE n 1 73 GLY n 1 74 THR n 1 75 VAL n 1 76 LEU n 1 77 VAL n 1 78 GLY n 1 79 PRO n 1 80 THR n 1 81 PRO n 1 82 VAL n 1 83 ASN n 1 84 ILE n 1 85 ILE n 1 86 GLY n 1 87 ARG n 1 88 ASN n 1 89 LEU n 1 90 LEU n 1 91 THR n 1 92 GLN n 1 93 ILE n 1 94 GLY n 1 95 ALA n 1 96 THR n 1 97 LEU n 1 98 ASN n 1 99 PHE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Lentivirus _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Human immunodeficiency virus 1' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 11676 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 2NC peptide-like . 'N-{(2S)-2-[(N-acetyl-L-threonyl-L-isoleucyl)amino]hexyl}-L-norleucyl-L-glutaminyl-N~5~-[amino(iminio)methyl]-L-ornithinamide' p2/NC 'C35 H68 N11 O8 1' 770.983 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 PRO 1 1 1 PRO PRO C . n A 1 2 GLN 2 2 2 GLN GLN C . n A 1 3 ILE 3 3 3 ILE ILE C . n A 1 4 THR 4 4 4 THR THR C . n A 1 5 LEU 5 5 5 LEU LEU C . n A 1 6 TRP 6 6 6 TRP TRP C . n A 1 7 LYS 7 7 7 LYS LYS C . n A 1 8 ARG 8 8 8 ARG ARG C . n A 1 9 PRO 9 9 9 PRO PRO C . n A 1 10 LEU 10 10 10 LEU LEU C . n A 1 11 VAL 11 11 11 VAL VAL C . n A 1 12 THR 12 12 12 THR THR C . n A 1 13 ILE 13 13 13 ILE ILE C . n A 1 14 LYS 14 14 14 LYS LYS C . n A 1 15 ILE 15 15 15 ILE ILE C . n A 1 16 GLY 16 16 16 GLY GLY C . n A 1 17 GLY 17 17 17 GLY GLY C . n A 1 18 GLN 18 18 18 GLN GLN C . n A 1 19 LEU 19 19 19 LEU LEU C . n A 1 20 LYS 20 20 20 LYS LYS C . n A 1 21 GLU 21 21 21 GLU GLU C . n A 1 22 ALA 22 22 22 ALA ALA C . n A 1 23 LEU 23 23 23 LEU LEU C . n A 1 24 LEU 24 24 24 LEU LEU C . n A 1 25 ASP 25 25 25 ASP ASP C . n A 1 26 THR 26 26 26 THR THR C . n A 1 27 GLY 27 27 27 GLY GLY C . n A 1 28 ALA 28 28 28 ALA ALA C . n A 1 29 ASP 29 29 29 ASP ASP C . n A 1 30 ASN 30 30 30 ASN ASN C . n A 1 31 THR 31 31 31 THR THR C . n A 1 32 VAL 32 32 32 VAL VAL C . n A 1 33 ILE 33 33 33 ILE ILE C . n A 1 34 GLU 34 34 34 GLU GLU C . n A 1 35 GLU 35 35 35 GLU GLU C . n A 1 36 MET 36 36 36 MET MET C . n A 1 37 SER 37 37 37 SER SER C . n A 1 38 LEU 38 38 38 LEU LEU C . n A 1 39 PRO 39 39 39 PRO PRO C . n A 1 40 GLY 40 40 40 GLY GLY C . n A 1 41 ARG 41 41 41 ARG ARG C . n A 1 42 TRP 42 42 42 TRP TRP C . n A 1 43 LYS 43 43 43 LYS LYS C . n A 1 44 PRO 44 44 44 PRO PRO C . n A 1 45 LYS 45 45 45 LYS LYS C . n A 1 46 MET 46 46 46 MET MET C . n A 1 47 ILE 47 47 47 ILE ILE C . n A 1 48 GLY 48 48 48 GLY GLY C . n A 1 49 GLY 49 49 49 GLY GLY C . n A 1 50 ILE 50 50 50 ILE ILE C . n A 1 51 GLY 51 51 51 GLY GLY C . n A 1 52 GLY 52 52 52 GLY GLY C . n A 1 53 PHE 53 53 53 PHE PHE C . n A 1 54 ILE 54 54 54 ILE ILE C . n A 1 55 LYS 55 55 55 LYS LYS C . n A 1 56 VAL 56 56 56 VAL VAL C . n A 1 57 ARG 57 57 57 ARG ARG C . n A 1 58 GLN 58 58 58 GLN GLN C . n A 1 59 TYR 59 59 59 TYR TYR C . n A 1 60 ASP 60 60 60 ASP ASP C . n A 1 61 GLN 61 61 61 GLN GLN C . n A 1 62 ILE 62 62 62 ILE ILE C . n A 1 63 ILE 63 63 63 ILE ILE C . n A 1 64 ILE 64 64 64 ILE ILE C . n A 1 65 GLU 65 65 65 GLU GLU C . n A 1 66 ILE 66 66 66 ILE ILE C . n A 1 67 ALA 67 67 67 ALA ALA C . n A 1 68 GLY 68 68 68 GLY GLY C . n A 1 69 HIS 69 69 69 HIS HIS C . n A 1 70 LYS 70 70 70 LYS LYS C . n A 1 71 ALA 71 71 71 ALA ALA C . n A 1 72 ILE 72 72 72 ILE ILE C . n A 1 73 GLY 73 73 73 GLY GLY C . n A 1 74 THR 74 74 74 THR THR C . n A 1 75 VAL 75 75 75 VAL VAL C . n A 1 76 LEU 76 76 76 LEU LEU C . n A 1 77 VAL 77 77 77 VAL VAL C . n A 1 78 GLY 78 78 78 GLY GLY C . n A 1 79 PRO 79 79 79 PRO PRO C . n A 1 80 THR 80 80 80 THR THR C . n A 1 81 PRO 81 81 81 PRO PRO C . n A 1 82 VAL 82 82 82 VAL VAL C . n A 1 83 ASN 83 83 83 ASN ASN C . n A 1 84 ILE 84 84 84 ILE ILE C . n A 1 85 ILE 85 85 85 ILE ILE C . n A 1 86 GLY 86 86 86 GLY GLY C . n A 1 87 ARG 87 87 87 ARG ARG C . n A 1 88 ASN 88 88 88 ASN ASN C . n A 1 89 LEU 89 89 89 LEU LEU C . n A 1 90 LEU 90 90 90 LEU LEU C . n A 1 91 THR 91 91 91 THR THR C . n A 1 92 GLN 92 92 92 GLN GLN C . n A 1 93 ILE 93 93 93 ILE ILE C . n A 1 94 GLY 94 94 94 GLY GLY C . n A 1 95 ALA 95 95 95 ALA ALA C . n A 1 96 THR 96 96 96 THR THR C . n A 1 97 LEU 97 97 97 LEU LEU C . n A 1 98 ASN 98 98 98 ASN ASN C . n A 1 99 PHE 99 99 99 PHE PHE C . n B 1 1 PRO 1 101 101 PRO PRO D . n B 1 2 GLN 2 102 102 GLN GLN D . n B 1 3 ILE 3 103 103 ILE ILE D . n B 1 4 THR 4 104 104 THR THR D . n B 1 5 LEU 5 105 105 LEU LEU D . n B 1 6 TRP 6 106 106 TRP TRP D . n B 1 7 LYS 7 107 107 LYS LYS D . n B 1 8 ARG 8 108 108 ARG ARG D . n B 1 9 PRO 9 109 109 PRO PRO D . n B 1 10 LEU 10 110 110 LEU LEU D . n B 1 11 VAL 11 111 111 VAL VAL D . n B 1 12 THR 12 112 112 THR THR D . n B 1 13 ILE 13 113 113 ILE ILE D . n B 1 14 LYS 14 114 114 LYS LYS D . n B 1 15 ILE 15 115 115 ILE ILE D . n B 1 16 GLY 16 116 116 GLY GLY D . n B 1 17 GLY 17 117 117 GLY GLY D . n B 1 18 GLN 18 118 118 GLN GLN D . n B 1 19 LEU 19 119 119 LEU LEU D . n B 1 20 LYS 20 120 120 LYS LYS D . n B 1 21 GLU 21 121 121 GLU GLU D . n B 1 22 ALA 22 122 122 ALA ALA D . n B 1 23 LEU 23 123 123 LEU LEU D . n B 1 24 LEU 24 124 124 LEU LEU D . n B 1 25 ASP 25 125 125 ASP ASP D . n B 1 26 THR 26 126 126 THR THR D . n B 1 27 GLY 27 127 127 GLY GLY D . n B 1 28 ALA 28 128 128 ALA ALA D . n B 1 29 ASP 29 129 129 ASP ASP D . n B 1 30 ASN 30 130 130 ASN ASN D . n B 1 31 THR 31 131 131 THR THR D . n B 1 32 VAL 32 132 132 VAL VAL D . n B 1 33 ILE 33 133 133 ILE ILE D . n B 1 34 GLU 34 134 134 GLU GLU D . n B 1 35 GLU 35 135 135 GLU GLU D . n B 1 36 MET 36 136 136 MET MET D . n B 1 37 SER 37 137 137 SER SER D . n B 1 38 LEU 38 138 138 LEU LEU D . n B 1 39 PRO 39 139 139 PRO PRO D . n B 1 40 GLY 40 140 140 GLY GLY D . n B 1 41 ARG 41 141 141 ARG ARG D . n B 1 42 TRP 42 142 142 TRP TRP D . n B 1 43 LYS 43 143 143 LYS LYS D . n B 1 44 PRO 44 144 144 PRO PRO D . n B 1 45 LYS 45 145 145 LYS LYS D . n B 1 46 MET 46 146 146 MET MET D . n B 1 47 ILE 47 147 147 ILE ILE D . n B 1 48 GLY 48 148 148 GLY GLY D . n B 1 49 GLY 49 149 149 GLY GLY D . n B 1 50 ILE 50 150 150 ILE ILE D . n B 1 51 GLY 51 151 151 GLY GLY D . n B 1 52 GLY 52 152 152 GLY GLY D . n B 1 53 PHE 53 153 153 PHE PHE D . n B 1 54 ILE 54 154 154 ILE ILE D . n B 1 55 LYS 55 155 155 LYS LYS D . n B 1 56 VAL 56 156 156 VAL VAL D . n B 1 57 ARG 57 157 157 ARG ARG D . n B 1 58 GLN 58 158 158 GLN GLN D . n B 1 59 TYR 59 159 159 TYR TYR D . n B 1 60 ASP 60 160 160 ASP ASP D . n B 1 61 GLN 61 161 161 GLN GLN D . n B 1 62 ILE 62 162 162 ILE ILE D . n B 1 63 ILE 63 163 163 ILE ILE D . n B 1 64 ILE 64 164 164 ILE ILE D . n B 1 65 GLU 65 165 165 GLU GLU D . n B 1 66 ILE 66 166 166 ILE ILE D . n B 1 67 ALA 67 167 167 ALA ALA D . n B 1 68 GLY 68 168 168 GLY GLY D . n B 1 69 HIS 69 169 169 HIS HIS D . n B 1 70 LYS 70 170 170 LYS LYS D . n B 1 71 ALA 71 171 171 ALA ALA D . n B 1 72 ILE 72 172 172 ILE ILE D . n B 1 73 GLY 73 173 173 GLY GLY D . n B 1 74 THR 74 174 174 THR THR D . n B 1 75 VAL 75 175 175 VAL VAL D . n B 1 76 LEU 76 176 176 LEU LEU D . n B 1 77 VAL 77 177 177 VAL VAL D . n B 1 78 GLY 78 178 178 GLY GLY D . n B 1 79 PRO 79 179 179 PRO PRO D . n B 1 80 THR 80 180 180 THR THR D . n B 1 81 PRO 81 181 181 PRO PRO D . n B 1 82 VAL 82 182 182 VAL VAL D . n B 1 83 ASN 83 183 183 ASN ASN D . n B 1 84 ILE 84 184 184 ILE ILE D . n B 1 85 ILE 85 185 185 ILE ILE D . n B 1 86 GLY 86 186 186 GLY GLY D . n B 1 87 ARG 87 187 187 ARG ARG D . n B 1 88 ASN 88 188 188 ASN ASN D . n B 1 89 LEU 89 189 189 LEU LEU D . n B 1 90 LEU 90 190 190 LEU LEU D . n B 1 91 THR 91 191 191 THR THR D . n B 1 92 GLN 92 192 192 GLN GLN D . n B 1 93 ILE 93 193 193 ILE ILE D . n B 1 94 GLY 94 194 194 GLY GLY D . n B 1 95 ALA 95 195 195 ALA ALA D . n B 1 96 THR 96 196 196 THR THR D . n B 1 97 LEU 97 197 197 LEU LEU D . n B 1 98 ASN 98 198 198 ASN ASN D . n B 1 99 PHE 99 199 199 PHE PHE D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 2NC 1 300 300 2NC ACE D . D 3 HOH 1 100 1 HOH HOH C . D 3 HOH 2 101 5 HOH HOH C . D 3 HOH 3 102 7 HOH HOH C . D 3 HOH 4 103 8 HOH HOH C . D 3 HOH 5 104 11 HOH HOH C . D 3 HOH 6 105 13 HOH HOH C . D 3 HOH 7 106 16 HOH HOH C . D 3 HOH 8 107 18 HOH HOH C . D 3 HOH 9 108 20 HOH HOH C . D 3 HOH 10 109 21 HOH HOH C . D 3 HOH 11 110 27 HOH HOH C . D 3 HOH 12 111 30 HOH HOH C . D 3 HOH 13 112 31 HOH HOH C . D 3 HOH 14 113 32 HOH HOH C . D 3 HOH 15 114 33 HOH HOH C . D 3 HOH 16 115 34 HOH HOH C . D 3 HOH 17 116 38 HOH HOH C . D 3 HOH 18 117 43 HOH HOH C . D 3 HOH 19 118 44 HOH HOH C . D 3 HOH 20 119 45 HOH HOH C . D 3 HOH 21 120 48 HOH HOH C . D 3 HOH 22 121 51 HOH HOH C . D 3 HOH 23 122 55 HOH HOH C . D 3 HOH 24 123 56 HOH HOH C . D 3 HOH 25 124 57 HOH HOH C . D 3 HOH 26 125 59 HOH HOH C . D 3 HOH 27 126 60 HOH HOH C . D 3 HOH 28 127 63 HOH HOH C . D 3 HOH 29 128 69 HOH HOH C . D 3 HOH 30 129 70 HOH HOH C . D 3 HOH 31 130 71 HOH HOH C . D 3 HOH 32 131 72 HOH HOH C . D 3 HOH 33 132 73 HOH HOH C . D 3 HOH 34 133 85 HOH HOH C . D 3 HOH 35 134 87 HOH HOH C . D 3 HOH 36 135 89 HOH HOH C . D 3 HOH 37 136 92 HOH HOH C . D 3 HOH 38 137 93 HOH HOH C . D 3 HOH 39 138 97 HOH HOH C . D 3 HOH 40 139 100 HOH HOH C . D 3 HOH 41 140 101 HOH HOH C . D 3 HOH 42 141 105 HOH HOH C . D 3 HOH 43 142 112 HOH HOH C . D 3 HOH 44 143 117 HOH HOH C . D 3 HOH 45 144 144 HOH HOH C . D 3 HOH 46 145 152 HOH HOH C . D 3 HOH 47 146 158 HOH HOH C . D 3 HOH 48 147 164 HOH HOH C . D 3 HOH 49 148 170 HOH HOH C . D 3 HOH 50 149 179 HOH HOH C . D 3 HOH 51 150 181 HOH HOH C . D 3 HOH 52 151 187 HOH HOH C . D 3 HOH 53 152 225 HOH HOH C . D 3 HOH 54 153 232 HOH HOH C . D 3 HOH 55 154 235 HOH HOH C . D 3 HOH 56 155 273 HOH HOH C . E 3 HOH 1 10 10 HOH HOH D . E 3 HOH 2 17 17 HOH HOH D . E 3 HOH 3 77 77 HOH HOH D . E 3 HOH 4 80 80 HOH HOH D . E 3 HOH 5 200 2 HOH HOH D . E 3 HOH 6 201 3 HOH HOH D . E 3 HOH 7 202 4 HOH HOH D . E 3 HOH 8 203 6 HOH HOH D . E 3 HOH 9 204 9 HOH HOH D . E 3 HOH 10 205 12 HOH HOH D . E 3 HOH 11 206 14 HOH HOH D . E 3 HOH 12 207 15 HOH HOH D . E 3 HOH 13 208 19 HOH HOH D . E 3 HOH 14 209 22 HOH HOH D . E 3 HOH 15 210 24 HOH HOH D . E 3 HOH 16 211 25 HOH HOH D . E 3 HOH 17 212 28 HOH HOH D . E 3 HOH 18 213 37 HOH HOH D . E 3 HOH 19 214 41 HOH HOH D . E 3 HOH 20 215 42 HOH HOH D . E 3 HOH 21 216 49 HOH HOH D . E 3 HOH 22 217 52 HOH HOH D . E 3 HOH 23 218 53 HOH HOH D . E 3 HOH 24 219 54 HOH HOH D . E 3 HOH 25 220 58 HOH HOH D . E 3 HOH 26 221 62 HOH HOH D . E 3 HOH 27 222 64 HOH HOH D . E 3 HOH 28 223 65 HOH HOH D . E 3 HOH 29 224 66 HOH HOH D . E 3 HOH 30 225 68 HOH HOH D . E 3 HOH 31 226 74 HOH HOH D . E 3 HOH 32 227 76 HOH HOH D . E 3 HOH 33 228 78 HOH HOH D . E 3 HOH 34 229 79 HOH HOH D . E 3 HOH 35 230 81 HOH HOH D . E 3 HOH 36 231 86 HOH HOH D . E 3 HOH 37 232 88 HOH HOH D . E 3 HOH 38 233 90 HOH HOH D . E 3 HOH 39 234 91 HOH HOH D . E 3 HOH 40 235 96 HOH HOH D . E 3 HOH 41 236 99 HOH HOH D . E 3 HOH 42 237 103 HOH HOH D . E 3 HOH 43 238 108 HOH HOH D . E 3 HOH 44 239 109 HOH HOH D . E 3 HOH 45 240 110 HOH HOH D . E 3 HOH 46 241 114 HOH HOH D . E 3 HOH 47 242 121 HOH HOH D . E 3 HOH 48 243 134 HOH HOH D . E 3 HOH 49 244 145 HOH HOH D . E 3 HOH 50 245 154 HOH HOH D . E 3 HOH 51 246 168 HOH HOH D . E 3 HOH 52 247 174 HOH HOH D . E 3 HOH 53 248 176 HOH HOH D . E 3 HOH 54 249 177 HOH HOH D . E 3 HOH 55 250 182 HOH HOH D . E 3 HOH 56 251 198 HOH HOH D . E 3 HOH 57 252 199 HOH HOH D . E 3 HOH 58 253 213 HOH HOH D . E 3 HOH 59 254 294 HOH HOH D . E 3 HOH 60 255 116 HOH HOH D . E 3 HOH 61 256 139 HOH HOH D . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal AMoRE phasing . ? 1 X-PLOR refinement 3.843 ? 2 ADSC 'data collection' . ? 3 DENZO 'data reduction' . ? 4 SCALEPACK 'data scaling' . ? 5 # _cell.entry_id 1FFI _cell.length_a 57.763 _cell.length_b 85.569 _cell.length_c 46.310 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 1FFI _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting orthorhombic _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? # _exptl.entry_id 1FFI _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 52.15 _exptl_crystal.density_Matthews 2.57 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH ? _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details ;CITRATE/PHOSPHATE BUFFER 0.05M, DTT 10MM, DMSO 10%, SATURATED AMMONIUM SULPHAT25-50%, PROTEIN 2-5 MG/ML, pH 5-6.5. VAPOR DIFFUSION, HANGING DROP at 298K ; _exptl_crystal_grow.pdbx_pH_range . # _diffrn.ambient_temp 90 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 _diffrn.id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 1999-10-10 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.037 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X12B' _diffrn_source.pdbx_wavelength 1.037 _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X12B _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1FFI _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 25.0 _reflns.d_resolution_high 1.7 _reflns.number_obs ? _reflns.number_all ? _reflns.percent_possible_obs ? _reflns.pdbx_Rmerge_I_obs 0.0590000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? # _reflns_shell.d_res_high 1.70 _reflns_shell.d_res_low 1.78 _reflns_shell.percent_possible_obs ? _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 0.2890000 _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_redundancy ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? # _refine.entry_id 1FFI _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all 25528 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_d_res_low 8.0 _refine.ls_d_res_high 1.7 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2110000 _refine.ls_R_factor_R_free 0.2520000 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.8 _refine.ls_number_reflns_R_free 1485 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'ENGH & HUBER' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details Random _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_phase_error ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1512 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 54 _refine_hist.number_atoms_solvent 117 _refine_hist.number_atoms_total 1683 _refine_hist.d_res_high 1.7 _refine_hist.d_res_low 8.0 # _database_PDB_matrix.entry_id 1FFI _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1FFI _struct.title ;STRUCTURAL IMPLICATIONS OF DRUG RESISTANT MUTANTS OF HIV-1 PROTEASE: HIGH RESOLUTION CRYSTAL STRUCTURES OF THE MUTANT PROTEASE/SUBSTRATE ANALOG COMPLEXES ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1FFI _struct_keywords.pdbx_keywords 'HYDROLASE/HYDROLASE INHIBITOR' _struct_keywords.text 'HIV-1 PROTEASE, HYDROLASE-HYDROLASE INHIBITOR COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? # _struct_ref.id 1 _struct_ref.db_code POL_HV1B5 _struct_ref.db_name UNP _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession P04587 _struct_ref.pdbx_align_begin 69 _struct_ref.pdbx_seq_one_letter_code ;PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPT PVNIIGRNLLTQIGCTLNF ; _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1FFI C 1 ? 99 ? P04587 69 ? 167 ? 1 99 2 1 1FFI D 1 ? 99 ? P04587 69 ? 167 ? 101 199 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1FFI LYS C 7 ? UNP P04587 GLN 75 'engineered mutation' 7 1 1 1FFI ASN C 30 ? UNP P04587 ASP 98 'engineered mutation' 30 2 1 1FFI ILE C 33 ? UNP P04587 LEU 101 'engineered mutation' 33 3 1 1FFI ILE C 63 ? UNP P04587 LEU 131 'engineered mutation' 63 4 1 1FFI ALA C 67 ? UNP P04587 CYS 135 'engineered mutation' 67 5 1 1FFI ALA C 95 ? UNP P04587 CYS 163 'engineered mutation' 95 6 2 1FFI LYS D 7 ? UNP P04587 GLN 75 'engineered mutation' 107 7 2 1FFI ASN D 30 ? UNP P04587 ASP 98 'engineered mutation' 130 8 2 1FFI ILE D 33 ? UNP P04587 LEU 101 'engineered mutation' 133 9 2 1FFI ILE D 63 ? UNP P04587 LEU 131 'engineered mutation' 163 10 2 1FFI ALA D 67 ? UNP P04587 CYS 135 'engineered mutation' 167 11 2 1FFI ALA D 95 ? UNP P04587 CYS 163 'engineered mutation' 195 12 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5490 ? 1 MORE -30 ? 1 'SSA (A^2)' 8930 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details 'The biological assembly is a dimer consisting of chains C and D' _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 86 ? THR A 91 ? GLY C 86 THR C 91 1 ? 6 HELX_P HELX_P2 2 GLY B 86 ? THR B 91 ? GLY D 186 THR D 191 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 4 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLN A 2 ? THR A 4 ? GLN C 2 THR C 4 A 2 THR B 96 ? ASN B 98 ? THR D 196 ASN D 198 A 3 THR A 96 ? ASN A 98 ? THR C 96 ASN C 98 A 4 GLN B 2 ? ILE B 3 ? GLN D 102 ILE D 103 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE A 3 ? N ILE C 3 O LEU B 97 ? O LEU D 197 A 2 3 N ASN B 98 ? N ASN D 198 O THR A 96 ? O THR C 96 A 3 4 O LEU A 97 ? O LEU C 97 N ILE B 3 ? N ILE D 103 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id D _struct_site.pdbx_auth_comp_id 2NC _struct_site.pdbx_auth_seq_id 300 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 28 _struct_site.details 'BINDING SITE FOR RESIDUE 2NC D 300' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 28 ASP A 25 ? ASP C 25 . ? 1_555 ? 2 AC1 28 GLY A 27 ? GLY C 27 . ? 1_555 ? 3 AC1 28 ALA A 28 ? ALA C 28 . ? 1_555 ? 4 AC1 28 ASP A 29 ? ASP C 29 . ? 1_555 ? 5 AC1 28 ASN A 30 ? ASN C 30 . ? 1_555 ? 6 AC1 28 GLY A 48 ? GLY C 48 . ? 1_555 ? 7 AC1 28 GLY A 49 ? GLY C 49 . ? 1_555 ? 8 AC1 28 PRO A 81 ? PRO C 81 . ? 1_555 ? 9 AC1 28 ILE A 84 ? ILE C 84 . ? 1_555 ? 10 AC1 28 HOH E . ? HOH D 10 . ? 1_555 ? 11 AC1 28 HOH E . ? HOH D 17 . ? 1_555 ? 12 AC1 28 HOH E . ? HOH D 77 . ? 1_555 ? 13 AC1 28 HOH E . ? HOH D 80 . ? 1_555 ? 14 AC1 28 ARG B 8 ? ARG D 108 . ? 1_555 ? 15 AC1 28 ASP B 25 ? ASP D 125 . ? 1_555 ? 16 AC1 28 GLY B 27 ? GLY D 127 . ? 1_555 ? 17 AC1 28 ALA B 28 ? ALA D 128 . ? 1_555 ? 18 AC1 28 ASP B 29 ? ASP D 129 . ? 1_555 ? 19 AC1 28 ASN B 30 ? ASN D 130 . ? 1_555 ? 20 AC1 28 ILE B 47 ? ILE D 147 . ? 1_555 ? 21 AC1 28 GLY B 48 ? GLY D 148 . ? 1_555 ? 22 AC1 28 GLY B 49 ? GLY D 149 . ? 1_555 ? 23 AC1 28 PHE B 53 ? PHE D 153 . ? 1_555 ? 24 AC1 28 PRO B 81 ? PRO D 181 . ? 1_555 ? 25 AC1 28 VAL B 82 ? VAL D 182 . ? 1_555 ? 26 AC1 28 HOH E . ? HOH D 203 . ? 1_555 ? 27 AC1 28 HOH E . ? HOH D 255 . ? 1_555 ? 28 AC1 28 HOH E . ? HOH D 256 . ? 1_555 ? # _pdbx_molecule_features.prd_id PRD_000398 _pdbx_molecule_features.name 'N-{(2S)-2-[(N-acetyl-L-threonyl-L-isoleucyl)amino]hexyl}-L-norleucyl-L-glutaminyl-N~5~-[amino(iminio)methyl]-L-ornithinamide' _pdbx_molecule_features.type Peptide-like _pdbx_molecule_features.class Inhibitor _pdbx_molecule_features.details ? # _pdbx_molecule.instance_id 1 _pdbx_molecule.prd_id PRD_000398 _pdbx_molecule.asym_id C # _pdbx_entry_details.entry_id 1FFI _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ;THE INHIBITOR 2NC HAS A REDUCED PEPTIDE BOND ISOSTERE [CH2-NH] IN PLACE OF THE SCISSILE AMIDE. THE COORDINATES OF 2NC WERE DEPOSITED WITH AN EXTRA ATOM O6 AT ZERO OCCUPANCY. THIS ZERO OCCUPANCY O6 HAS BEEN REMOVED FROM THE RELEASED FILE. ; _pdbx_entry_details.sequence_details ;MUTATIONS Q7K, L33I, L63I, C67A, C95A, HAVE BEEN MADE TO STABILIZE THE PROTEASE FROM AUTOPROTEOLYSIS, WHILE RETAINING ACTIVITY SIMILAR TO WILD-TYPE HIV-1 PROTEASE ; _pdbx_entry_details.has_ligand_of_interest ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 2NC C C N N 1 2NC O O N N 2 2NC CH3 C N N 3 2NC N N N N 4 2NC CA C N S 5 2NC C1 C N N 6 2NC O1 O N N 7 2NC CB C N R 8 2NC OG1 O N N 9 2NC CG2 C N N 10 2NC N1 N N N 11 2NC CA1 C N S 12 2NC C2 C N N 13 2NC O2 O N N 14 2NC CB1 C N S 15 2NC CG1 C N N 16 2NC CG21 C N N 17 2NC CD1 C N N 18 2NC N2 N N N 19 2NC CA2 C N S 20 2NC C3 C N N 21 2NC CB2 C N N 22 2NC CG C N N 23 2NC CD C N N 24 2NC CE C N N 25 2NC N3 N N N 26 2NC CA3 C N S 27 2NC C4 C N N 28 2NC O3 O N N 29 2NC CB3 C N N 30 2NC CG3 C N N 31 2NC CD2 C N N 32 2NC CE1 C N N 33 2NC N4 N N N 34 2NC CA4 C N S 35 2NC C5 C N N 36 2NC O4 O N N 37 2NC CB4 C N N 38 2NC CG4 C N N 39 2NC CD3 C N N 40 2NC OE1 O N N 41 2NC NE2 N N N 42 2NC N5 N N N 43 2NC CA5 C N S 44 2NC C6 C N N 45 2NC O5 O N N 46 2NC CB5 C N N 47 2NC CG5 C N N 48 2NC CD4 C N N 49 2NC NE N N N 50 2NC CZ C N N 51 2NC NH1 N N N 52 2NC NH2 N N N 53 2NC N6 N N N 54 2NC H1 H N N 55 2NC H2 H N N 56 2NC H3 H N N 57 2NC H H N N 58 2NC HA H N N 59 2NC HB H N N 60 2NC HG1 H N N 61 2NC HG21 H N N 62 2NC HG22 H N N 63 2NC HG23 H N N 64 2NC H4 H N N 65 2NC HA1 H N N 66 2NC HB1 H N N 67 2NC HG12 H N N 68 2NC HG13 H N N 69 2NC HG24 H N N 70 2NC HG25 H N N 71 2NC HG26 H N N 72 2NC HD11 H N N 73 2NC HD12 H N N 74 2NC HD13 H N N 75 2NC H5 H N N 76 2NC HA2 H N N 77 2NC HC31 H N N 78 2NC HC32 H N N 79 2NC HB2 H N N 80 2NC HB3 H N N 81 2NC HG2 H N N 82 2NC HG3 H N N 83 2NC HD2 H N N 84 2NC HD3 H N N 85 2NC HE1 H N N 86 2NC HE2 H N N 87 2NC HE3 H N N 88 2NC H6 H N N 89 2NC HA3 H N N 90 2NC HB21 H N N 91 2NC HB31 H N N 92 2NC HG27 H N N 93 2NC HG31 H N N 94 2NC HD21 H N N 95 2NC HD31 H N N 96 2NC HE11 H N N 97 2NC HE21 H N N 98 2NC HE31 H N N 99 2NC H7 H N N 100 2NC HA4 H N N 101 2NC HB22 H N N 102 2NC HB32 H N N 103 2NC HG28 H N N 104 2NC HG32 H N N 105 2NC HE22 H N N 106 2NC HE23 H N N 107 2NC H8 H N N 108 2NC HA5 H N N 109 2NC HB23 H N N 110 2NC HB33 H N N 111 2NC HG29 H N N 112 2NC HG33 H N N 113 2NC HD22 H N N 114 2NC HD32 H N N 115 2NC HE H N N 116 2NC HH11 H N N 117 2NC HH12 H N N 118 2NC HH21 H N N 119 2NC HH22 H N N 120 2NC HN1 H N N 121 2NC HN2 H N N 122 ALA N N N N 123 ALA CA C N S 124 ALA C C N N 125 ALA O O N N 126 ALA CB C N N 127 ALA OXT O N N 128 ALA H H N N 129 ALA H2 H N N 130 ALA HA H N N 131 ALA HB1 H N N 132 ALA HB2 H N N 133 ALA HB3 H N N 134 ALA HXT H N N 135 ARG N N N N 136 ARG CA C N S 137 ARG C C N N 138 ARG O O N N 139 ARG CB C N N 140 ARG CG C N N 141 ARG CD C N N 142 ARG NE N N N 143 ARG CZ C N N 144 ARG NH1 N N N 145 ARG NH2 N N N 146 ARG OXT O N N 147 ARG H H N N 148 ARG H2 H N N 149 ARG HA H N N 150 ARG HB2 H N N 151 ARG HB3 H N N 152 ARG HG2 H N N 153 ARG HG3 H N N 154 ARG HD2 H N N 155 ARG HD3 H N N 156 ARG HE H N N 157 ARG HH11 H N N 158 ARG HH12 H N N 159 ARG HH21 H N N 160 ARG HH22 H N N 161 ARG HXT H N N 162 ASN N N N N 163 ASN CA C N S 164 ASN C C N N 165 ASN O O N N 166 ASN CB C N N 167 ASN CG C N N 168 ASN OD1 O N N 169 ASN ND2 N N N 170 ASN OXT O N N 171 ASN H H N N 172 ASN H2 H N N 173 ASN HA H N N 174 ASN HB2 H N N 175 ASN HB3 H N N 176 ASN HD21 H N N 177 ASN HD22 H N N 178 ASN HXT H N N 179 ASP N N N N 180 ASP CA C N S 181 ASP C C N N 182 ASP O O N N 183 ASP CB C N N 184 ASP CG C N N 185 ASP OD1 O N N 186 ASP OD2 O N N 187 ASP OXT O N N 188 ASP H H N N 189 ASP H2 H N N 190 ASP HA H N N 191 ASP HB2 H N N 192 ASP HB3 H N N 193 ASP HD2 H N N 194 ASP HXT H N N 195 CYS N N N N 196 CYS CA C N R 197 CYS C C N N 198 CYS O O N N 199 CYS CB C N N 200 CYS SG S N N 201 CYS OXT O N N 202 CYS H H N N 203 CYS H2 H N N 204 CYS HA H N N 205 CYS HB2 H N N 206 CYS HB3 H N N 207 CYS HG H N N 208 CYS HXT H N N 209 GLN N N N N 210 GLN CA C N S 211 GLN C C N N 212 GLN O O N N 213 GLN CB C N N 214 GLN CG C N N 215 GLN CD C N N 216 GLN OE1 O N N 217 GLN NE2 N N N 218 GLN OXT O N N 219 GLN H H N N 220 GLN H2 H N N 221 GLN HA H N N 222 GLN HB2 H N N 223 GLN HB3 H N N 224 GLN HG2 H N N 225 GLN HG3 H N N 226 GLN HE21 H N N 227 GLN HE22 H N N 228 GLN HXT H N N 229 GLU N N N N 230 GLU CA C N S 231 GLU C C N N 232 GLU O O N N 233 GLU CB C N N 234 GLU CG C N N 235 GLU CD C N N 236 GLU OE1 O N N 237 GLU OE2 O N N 238 GLU OXT O N N 239 GLU H H N N 240 GLU H2 H N N 241 GLU HA H N N 242 GLU HB2 H N N 243 GLU HB3 H N N 244 GLU HG2 H N N 245 GLU HG3 H N N 246 GLU HE2 H N N 247 GLU HXT H N N 248 GLY N N N N 249 GLY CA C N N 250 GLY C C N N 251 GLY O O N N 252 GLY OXT O N N 253 GLY H H N N 254 GLY H2 H N N 255 GLY HA2 H N N 256 GLY HA3 H N N 257 GLY HXT H N N 258 HIS N N N N 259 HIS CA C N S 260 HIS C C N N 261 HIS O O N N 262 HIS CB C N N 263 HIS CG C Y N 264 HIS ND1 N Y N 265 HIS CD2 C Y N 266 HIS CE1 C Y N 267 HIS NE2 N Y N 268 HIS OXT O N N 269 HIS H H N N 270 HIS H2 H N N 271 HIS HA H N N 272 HIS HB2 H N N 273 HIS HB3 H N N 274 HIS HD1 H N N 275 HIS HD2 H N N 276 HIS HE1 H N N 277 HIS HE2 H N N 278 HIS HXT H N N 279 HOH O O N N 280 HOH H1 H N N 281 HOH H2 H N N 282 ILE N N N N 283 ILE CA C N S 284 ILE C C N N 285 ILE O O N N 286 ILE CB C N S 287 ILE CG1 C N N 288 ILE CG2 C N N 289 ILE CD1 C N N 290 ILE OXT O N N 291 ILE H H N N 292 ILE H2 H N N 293 ILE HA H N N 294 ILE HB H N N 295 ILE HG12 H N N 296 ILE HG13 H N N 297 ILE HG21 H N N 298 ILE HG22 H N N 299 ILE HG23 H N N 300 ILE HD11 H N N 301 ILE HD12 H N N 302 ILE HD13 H N N 303 ILE HXT H N N 304 LEU N N N N 305 LEU CA C N S 306 LEU C C N N 307 LEU O O N N 308 LEU CB C N N 309 LEU CG C N N 310 LEU CD1 C N N 311 LEU CD2 C N N 312 LEU OXT O N N 313 LEU H H N N 314 LEU H2 H N N 315 LEU HA H N N 316 LEU HB2 H N N 317 LEU HB3 H N N 318 LEU HG H N N 319 LEU HD11 H N N 320 LEU HD12 H N N 321 LEU HD13 H N N 322 LEU HD21 H N N 323 LEU HD22 H N N 324 LEU HD23 H N N 325 LEU HXT H N N 326 LYS N N N N 327 LYS CA C N S 328 LYS C C N N 329 LYS O O N N 330 LYS CB C N N 331 LYS CG C N N 332 LYS CD C N N 333 LYS CE C N N 334 LYS NZ N N N 335 LYS OXT O N N 336 LYS H H N N 337 LYS H2 H N N 338 LYS HA H N N 339 LYS HB2 H N N 340 LYS HB3 H N N 341 LYS HG2 H N N 342 LYS HG3 H N N 343 LYS HD2 H N N 344 LYS HD3 H N N 345 LYS HE2 H N N 346 LYS HE3 H N N 347 LYS HZ1 H N N 348 LYS HZ2 H N N 349 LYS HZ3 H N N 350 LYS HXT H N N 351 MET N N N N 352 MET CA C N S 353 MET C C N N 354 MET O O N N 355 MET CB C N N 356 MET CG C N N 357 MET SD S N N 358 MET CE C N N 359 MET OXT O N N 360 MET H H N N 361 MET H2 H N N 362 MET HA H N N 363 MET HB2 H N N 364 MET HB3 H N N 365 MET HG2 H N N 366 MET HG3 H N N 367 MET HE1 H N N 368 MET HE2 H N N 369 MET HE3 H N N 370 MET HXT H N N 371 PHE N N N N 372 PHE CA C N S 373 PHE C C N N 374 PHE O O N N 375 PHE CB C N N 376 PHE CG C Y N 377 PHE CD1 C Y N 378 PHE CD2 C Y N 379 PHE CE1 C Y N 380 PHE CE2 C Y N 381 PHE CZ C Y N 382 PHE OXT O N N 383 PHE H H N N 384 PHE H2 H N N 385 PHE HA H N N 386 PHE HB2 H N N 387 PHE HB3 H N N 388 PHE HD1 H N N 389 PHE HD2 H N N 390 PHE HE1 H N N 391 PHE HE2 H N N 392 PHE HZ H N N 393 PHE HXT H N N 394 PRO N N N N 395 PRO CA C N S 396 PRO C C N N 397 PRO O O N N 398 PRO CB C N N 399 PRO CG C N N 400 PRO CD C N N 401 PRO OXT O N N 402 PRO H H N N 403 PRO HA H N N 404 PRO HB2 H N N 405 PRO HB3 H N N 406 PRO HG2 H N N 407 PRO HG3 H N N 408 PRO HD2 H N N 409 PRO HD3 H N N 410 PRO HXT H N N 411 SER N N N N 412 SER CA C N S 413 SER C C N N 414 SER O O N N 415 SER CB C N N 416 SER OG O N N 417 SER OXT O N N 418 SER H H N N 419 SER H2 H N N 420 SER HA H N N 421 SER HB2 H N N 422 SER HB3 H N N 423 SER HG H N N 424 SER HXT H N N 425 THR N N N N 426 THR CA C N S 427 THR C C N N 428 THR O O N N 429 THR CB C N R 430 THR OG1 O N N 431 THR CG2 C N N 432 THR OXT O N N 433 THR H H N N 434 THR H2 H N N 435 THR HA H N N 436 THR HB H N N 437 THR HG1 H N N 438 THR HG21 H N N 439 THR HG22 H N N 440 THR HG23 H N N 441 THR HXT H N N 442 TRP N N N N 443 TRP CA C N S 444 TRP C C N N 445 TRP O O N N 446 TRP CB C N N 447 TRP CG C Y N 448 TRP CD1 C Y N 449 TRP CD2 C Y N 450 TRP NE1 N Y N 451 TRP CE2 C Y N 452 TRP CE3 C Y N 453 TRP CZ2 C Y N 454 TRP CZ3 C Y N 455 TRP CH2 C Y N 456 TRP OXT O N N 457 TRP H H N N 458 TRP H2 H N N 459 TRP HA H N N 460 TRP HB2 H N N 461 TRP HB3 H N N 462 TRP HD1 H N N 463 TRP HE1 H N N 464 TRP HE3 H N N 465 TRP HZ2 H N N 466 TRP HZ3 H N N 467 TRP HH2 H N N 468 TRP HXT H N N 469 TYR N N N N 470 TYR CA C N S 471 TYR C C N N 472 TYR O O N N 473 TYR CB C N N 474 TYR CG C Y N 475 TYR CD1 C Y N 476 TYR CD2 C Y N 477 TYR CE1 C Y N 478 TYR CE2 C Y N 479 TYR CZ C Y N 480 TYR OH O N N 481 TYR OXT O N N 482 TYR H H N N 483 TYR H2 H N N 484 TYR HA H N N 485 TYR HB2 H N N 486 TYR HB3 H N N 487 TYR HD1 H N N 488 TYR HD2 H N N 489 TYR HE1 H N N 490 TYR HE2 H N N 491 TYR HH H N N 492 TYR HXT H N N 493 VAL N N N N 494 VAL CA C N S 495 VAL C C N N 496 VAL O O N N 497 VAL CB C N N 498 VAL CG1 C N N 499 VAL CG2 C N N 500 VAL OXT O N N 501 VAL H H N N 502 VAL H2 H N N 503 VAL HA H N N 504 VAL HB H N N 505 VAL HG11 H N N 506 VAL HG12 H N N 507 VAL HG13 H N N 508 VAL HG21 H N N 509 VAL HG22 H N N 510 VAL HG23 H N N 511 VAL HXT H N N 512 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 2NC C O doub N N 1 2NC C CH3 sing N N 2 2NC CH3 H1 sing N N 3 2NC CH3 H2 sing N N 4 2NC CH3 H3 sing N N 5 2NC N CA sing N N 6 2NC N H sing N N 7 2NC CA C1 sing N N 8 2NC CA CB sing N N 9 2NC CA HA sing N N 10 2NC C1 O1 doub N N 11 2NC CB OG1 sing N N 12 2NC CB CG2 sing N N 13 2NC CB HB sing N N 14 2NC OG1 HG1 sing N N 15 2NC CG2 HG21 sing N N 16 2NC CG2 HG22 sing N N 17 2NC CG2 HG23 sing N N 18 2NC N1 CA1 sing N N 19 2NC N1 H4 sing N N 20 2NC CA1 C2 sing N N 21 2NC CA1 CB1 sing N N 22 2NC CA1 HA1 sing N N 23 2NC C2 O2 doub N N 24 2NC CB1 CG1 sing N N 25 2NC CB1 CG21 sing N N 26 2NC CB1 HB1 sing N N 27 2NC CG1 CD1 sing N N 28 2NC CG1 HG12 sing N N 29 2NC CG1 HG13 sing N N 30 2NC CG21 HG24 sing N N 31 2NC CG21 HG25 sing N N 32 2NC CG21 HG26 sing N N 33 2NC CD1 HD11 sing N N 34 2NC CD1 HD12 sing N N 35 2NC CD1 HD13 sing N N 36 2NC N2 CA2 sing N N 37 2NC N2 H5 sing N N 38 2NC CA2 C3 sing N N 39 2NC CA2 CB2 sing N N 40 2NC CA2 HA2 sing N N 41 2NC CB2 CG sing N N 42 2NC CB2 HB2 sing N N 43 2NC CB2 HB3 sing N N 44 2NC CG CD sing N N 45 2NC CG HG2 sing N N 46 2NC CG HG3 sing N N 47 2NC CD CE sing N N 48 2NC CD HD2 sing N N 49 2NC CD HD3 sing N N 50 2NC CE HE1 sing N N 51 2NC CE HE2 sing N N 52 2NC CE HE3 sing N N 53 2NC N3 CA3 sing N N 54 2NC N3 H6 sing N N 55 2NC CA3 C4 sing N N 56 2NC CA3 CB3 sing N N 57 2NC CA3 HA3 sing N N 58 2NC C4 O3 doub N N 59 2NC CB3 CG3 sing N N 60 2NC CB3 HB21 sing N N 61 2NC CB3 HB31 sing N N 62 2NC CG3 CD2 sing N N 63 2NC CG3 HG27 sing N N 64 2NC CG3 HG31 sing N N 65 2NC CD2 CE1 sing N N 66 2NC CD2 HD21 sing N N 67 2NC CD2 HD31 sing N N 68 2NC CE1 HE11 sing N N 69 2NC CE1 HE21 sing N N 70 2NC CE1 HE31 sing N N 71 2NC N4 CA4 sing N N 72 2NC N4 H7 sing N N 73 2NC CA4 C5 sing N N 74 2NC CA4 CB4 sing N N 75 2NC CA4 HA4 sing N N 76 2NC C5 O4 doub N N 77 2NC CB4 CG4 sing N N 78 2NC CB4 HB22 sing N N 79 2NC CB4 HB32 sing N N 80 2NC CG4 CD3 sing N N 81 2NC CG4 HG28 sing N N 82 2NC CG4 HG32 sing N N 83 2NC CD3 OE1 doub N N 84 2NC CD3 NE2 sing N N 85 2NC NE2 HE22 sing N N 86 2NC NE2 HE23 sing N N 87 2NC N5 CA5 sing N N 88 2NC N5 H8 sing N N 89 2NC CA5 C6 sing N N 90 2NC CA5 CB5 sing N N 91 2NC CA5 HA5 sing N N 92 2NC C6 O5 doub N N 93 2NC CB5 CG5 sing N N 94 2NC CB5 HB23 sing N N 95 2NC CB5 HB33 sing N N 96 2NC CG5 CD4 sing N N 97 2NC CG5 HG29 sing N N 98 2NC CG5 HG33 sing N N 99 2NC CD4 NE sing N N 100 2NC CD4 HD22 sing N N 101 2NC CD4 HD32 sing N N 102 2NC NE CZ sing N N 103 2NC NE HE sing N N 104 2NC CZ NH1 sing N N 105 2NC CZ NH2 doub N N 106 2NC NH1 HH11 sing N N 107 2NC NH1 HH12 sing N N 108 2NC NH2 HH21 sing N N 109 2NC NH2 HH22 sing N N 110 2NC N6 HN1 sing N N 111 2NC N6 HN2 sing N N 112 2NC C N sing N N 113 2NC C1 N1 sing N N 114 2NC C2 N2 sing N N 115 2NC C3 N3 sing N N 116 2NC C4 N4 sing N N 117 2NC C5 N5 sing N N 118 2NC C3 HC31 sing N N 119 2NC C3 HC32 sing N N 120 2NC C6 N6 sing N N 121 ALA N CA sing N N 122 ALA N H sing N N 123 ALA N H2 sing N N 124 ALA CA C sing N N 125 ALA CA CB sing N N 126 ALA CA HA sing N N 127 ALA C O doub N N 128 ALA C OXT sing N N 129 ALA CB HB1 sing N N 130 ALA CB HB2 sing N N 131 ALA CB HB3 sing N N 132 ALA OXT HXT sing N N 133 ARG N CA sing N N 134 ARG N H sing N N 135 ARG N H2 sing N N 136 ARG CA C sing N N 137 ARG CA CB sing N N 138 ARG CA HA sing N N 139 ARG C O doub N N 140 ARG C OXT sing N N 141 ARG CB CG sing N N 142 ARG CB HB2 sing N N 143 ARG CB HB3 sing N N 144 ARG CG CD sing N N 145 ARG CG HG2 sing N N 146 ARG CG HG3 sing N N 147 ARG CD NE sing N N 148 ARG CD HD2 sing N N 149 ARG CD HD3 sing N N 150 ARG NE CZ sing N N 151 ARG NE HE sing N N 152 ARG CZ NH1 sing N N 153 ARG CZ NH2 doub N N 154 ARG NH1 HH11 sing N N 155 ARG NH1 HH12 sing N N 156 ARG NH2 HH21 sing N N 157 ARG NH2 HH22 sing N N 158 ARG OXT HXT sing N N 159 ASN N CA sing N N 160 ASN N H sing N N 161 ASN N H2 sing N N 162 ASN CA C sing N N 163 ASN CA CB sing N N 164 ASN CA HA sing N N 165 ASN C O doub N N 166 ASN C OXT sing N N 167 ASN CB CG sing N N 168 ASN CB HB2 sing N N 169 ASN CB HB3 sing N N 170 ASN CG OD1 doub N N 171 ASN CG ND2 sing N N 172 ASN ND2 HD21 sing N N 173 ASN ND2 HD22 sing N N 174 ASN OXT HXT sing N N 175 ASP N CA sing N N 176 ASP N H sing N N 177 ASP N H2 sing N N 178 ASP CA C sing N N 179 ASP CA CB sing N N 180 ASP CA HA sing N N 181 ASP C O doub N N 182 ASP C OXT sing N N 183 ASP CB CG sing N N 184 ASP CB HB2 sing N N 185 ASP CB HB3 sing N N 186 ASP CG OD1 doub N N 187 ASP CG OD2 sing N N 188 ASP OD2 HD2 sing N N 189 ASP OXT HXT sing N N 190 CYS N CA sing N N 191 CYS N H sing N N 192 CYS N H2 sing N N 193 CYS CA C sing N N 194 CYS CA CB sing N N 195 CYS CA HA sing N N 196 CYS C O doub N N 197 CYS C OXT sing N N 198 CYS CB SG sing N N 199 CYS CB HB2 sing N N 200 CYS CB HB3 sing N N 201 CYS SG HG sing N N 202 CYS OXT HXT sing N N 203 GLN N CA sing N N 204 GLN N H sing N N 205 GLN N H2 sing N N 206 GLN CA C sing N N 207 GLN CA CB sing N N 208 GLN CA HA sing N N 209 GLN C O doub N N 210 GLN C OXT sing N N 211 GLN CB CG sing N N 212 GLN CB HB2 sing N N 213 GLN CB HB3 sing N N 214 GLN CG CD sing N N 215 GLN CG HG2 sing N N 216 GLN CG HG3 sing N N 217 GLN CD OE1 doub N N 218 GLN CD NE2 sing N N 219 GLN NE2 HE21 sing N N 220 GLN NE2 HE22 sing N N 221 GLN OXT HXT sing N N 222 GLU N CA sing N N 223 GLU N H sing N N 224 GLU N H2 sing N N 225 GLU CA C sing N N 226 GLU CA CB sing N N 227 GLU CA HA sing N N 228 GLU C O doub N N 229 GLU C OXT sing N N 230 GLU CB CG sing N N 231 GLU CB HB2 sing N N 232 GLU CB HB3 sing N N 233 GLU CG CD sing N N 234 GLU CG HG2 sing N N 235 GLU CG HG3 sing N N 236 GLU CD OE1 doub N N 237 GLU CD OE2 sing N N 238 GLU OE2 HE2 sing N N 239 GLU OXT HXT sing N N 240 GLY N CA sing N N 241 GLY N H sing N N 242 GLY N H2 sing N N 243 GLY CA C sing N N 244 GLY CA HA2 sing N N 245 GLY CA HA3 sing N N 246 GLY C O doub N N 247 GLY C OXT sing N N 248 GLY OXT HXT sing N N 249 HIS N CA sing N N 250 HIS N H sing N N 251 HIS N H2 sing N N 252 HIS CA C sing N N 253 HIS CA CB sing N N 254 HIS CA HA sing N N 255 HIS C O doub N N 256 HIS C OXT sing N N 257 HIS CB CG sing N N 258 HIS CB HB2 sing N N 259 HIS CB HB3 sing N N 260 HIS CG ND1 sing Y N 261 HIS CG CD2 doub Y N 262 HIS ND1 CE1 doub Y N 263 HIS ND1 HD1 sing N N 264 HIS CD2 NE2 sing Y N 265 HIS CD2 HD2 sing N N 266 HIS CE1 NE2 sing Y N 267 HIS CE1 HE1 sing N N 268 HIS NE2 HE2 sing N N 269 HIS OXT HXT sing N N 270 HOH O H1 sing N N 271 HOH O H2 sing N N 272 ILE N CA sing N N 273 ILE N H sing N N 274 ILE N H2 sing N N 275 ILE CA C sing N N 276 ILE CA CB sing N N 277 ILE CA HA sing N N 278 ILE C O doub N N 279 ILE C OXT sing N N 280 ILE CB CG1 sing N N 281 ILE CB CG2 sing N N 282 ILE CB HB sing N N 283 ILE CG1 CD1 sing N N 284 ILE CG1 HG12 sing N N 285 ILE CG1 HG13 sing N N 286 ILE CG2 HG21 sing N N 287 ILE CG2 HG22 sing N N 288 ILE CG2 HG23 sing N N 289 ILE CD1 HD11 sing N N 290 ILE CD1 HD12 sing N N 291 ILE CD1 HD13 sing N N 292 ILE OXT HXT sing N N 293 LEU N CA sing N N 294 LEU N H sing N N 295 LEU N H2 sing N N 296 LEU CA C sing N N 297 LEU CA CB sing N N 298 LEU CA HA sing N N 299 LEU C O doub N N 300 LEU C OXT sing N N 301 LEU CB CG sing N N 302 LEU CB HB2 sing N N 303 LEU CB HB3 sing N N 304 LEU CG CD1 sing N N 305 LEU CG CD2 sing N N 306 LEU CG HG sing N N 307 LEU CD1 HD11 sing N N 308 LEU CD1 HD12 sing N N 309 LEU CD1 HD13 sing N N 310 LEU CD2 HD21 sing N N 311 LEU CD2 HD22 sing N N 312 LEU CD2 HD23 sing N N 313 LEU OXT HXT sing N N 314 LYS N CA sing N N 315 LYS N H sing N N 316 LYS N H2 sing N N 317 LYS CA C sing N N 318 LYS CA CB sing N N 319 LYS CA HA sing N N 320 LYS C O doub N N 321 LYS C OXT sing N N 322 LYS CB CG sing N N 323 LYS CB HB2 sing N N 324 LYS CB HB3 sing N N 325 LYS CG CD sing N N 326 LYS CG HG2 sing N N 327 LYS CG HG3 sing N N 328 LYS CD CE sing N N 329 LYS CD HD2 sing N N 330 LYS CD HD3 sing N N 331 LYS CE NZ sing N N 332 LYS CE HE2 sing N N 333 LYS CE HE3 sing N N 334 LYS NZ HZ1 sing N N 335 LYS NZ HZ2 sing N N 336 LYS NZ HZ3 sing N N 337 LYS OXT HXT sing N N 338 MET N CA sing N N 339 MET N H sing N N 340 MET N H2 sing N N 341 MET CA C sing N N 342 MET CA CB sing N N 343 MET CA HA sing N N 344 MET C O doub N N 345 MET C OXT sing N N 346 MET CB CG sing N N 347 MET CB HB2 sing N N 348 MET CB HB3 sing N N 349 MET CG SD sing N N 350 MET CG HG2 sing N N 351 MET CG HG3 sing N N 352 MET SD CE sing N N 353 MET CE HE1 sing N N 354 MET CE HE2 sing N N 355 MET CE HE3 sing N N 356 MET OXT HXT sing N N 357 PHE N CA sing N N 358 PHE N H sing N N 359 PHE N H2 sing N N 360 PHE CA C sing N N 361 PHE CA CB sing N N 362 PHE CA HA sing N N 363 PHE C O doub N N 364 PHE C OXT sing N N 365 PHE CB CG sing N N 366 PHE CB HB2 sing N N 367 PHE CB HB3 sing N N 368 PHE CG CD1 doub Y N 369 PHE CG CD2 sing Y N 370 PHE CD1 CE1 sing Y N 371 PHE CD1 HD1 sing N N 372 PHE CD2 CE2 doub Y N 373 PHE CD2 HD2 sing N N 374 PHE CE1 CZ doub Y N 375 PHE CE1 HE1 sing N N 376 PHE CE2 CZ sing Y N 377 PHE CE2 HE2 sing N N 378 PHE CZ HZ sing N N 379 PHE OXT HXT sing N N 380 PRO N CA sing N N 381 PRO N CD sing N N 382 PRO N H sing N N 383 PRO CA C sing N N 384 PRO CA CB sing N N 385 PRO CA HA sing N N 386 PRO C O doub N N 387 PRO C OXT sing N N 388 PRO CB CG sing N N 389 PRO CB HB2 sing N N 390 PRO CB HB3 sing N N 391 PRO CG CD sing N N 392 PRO CG HG2 sing N N 393 PRO CG HG3 sing N N 394 PRO CD HD2 sing N N 395 PRO CD HD3 sing N N 396 PRO OXT HXT sing N N 397 SER N CA sing N N 398 SER N H sing N N 399 SER N H2 sing N N 400 SER CA C sing N N 401 SER CA CB sing N N 402 SER CA HA sing N N 403 SER C O doub N N 404 SER C OXT sing N N 405 SER CB OG sing N N 406 SER CB HB2 sing N N 407 SER CB HB3 sing N N 408 SER OG HG sing N N 409 SER OXT HXT sing N N 410 THR N CA sing N N 411 THR N H sing N N 412 THR N H2 sing N N 413 THR CA C sing N N 414 THR CA CB sing N N 415 THR CA HA sing N N 416 THR C O doub N N 417 THR C OXT sing N N 418 THR CB OG1 sing N N 419 THR CB CG2 sing N N 420 THR CB HB sing N N 421 THR OG1 HG1 sing N N 422 THR CG2 HG21 sing N N 423 THR CG2 HG22 sing N N 424 THR CG2 HG23 sing N N 425 THR OXT HXT sing N N 426 TRP N CA sing N N 427 TRP N H sing N N 428 TRP N H2 sing N N 429 TRP CA C sing N N 430 TRP CA CB sing N N 431 TRP CA HA sing N N 432 TRP C O doub N N 433 TRP C OXT sing N N 434 TRP CB CG sing N N 435 TRP CB HB2 sing N N 436 TRP CB HB3 sing N N 437 TRP CG CD1 doub Y N 438 TRP CG CD2 sing Y N 439 TRP CD1 NE1 sing Y N 440 TRP CD1 HD1 sing N N 441 TRP CD2 CE2 doub Y N 442 TRP CD2 CE3 sing Y N 443 TRP NE1 CE2 sing Y N 444 TRP NE1 HE1 sing N N 445 TRP CE2 CZ2 sing Y N 446 TRP CE3 CZ3 doub Y N 447 TRP CE3 HE3 sing N N 448 TRP CZ2 CH2 doub Y N 449 TRP CZ2 HZ2 sing N N 450 TRP CZ3 CH2 sing Y N 451 TRP CZ3 HZ3 sing N N 452 TRP CH2 HH2 sing N N 453 TRP OXT HXT sing N N 454 TYR N CA sing N N 455 TYR N H sing N N 456 TYR N H2 sing N N 457 TYR CA C sing N N 458 TYR CA CB sing N N 459 TYR CA HA sing N N 460 TYR C O doub N N 461 TYR C OXT sing N N 462 TYR CB CG sing N N 463 TYR CB HB2 sing N N 464 TYR CB HB3 sing N N 465 TYR CG CD1 doub Y N 466 TYR CG CD2 sing Y N 467 TYR CD1 CE1 sing Y N 468 TYR CD1 HD1 sing N N 469 TYR CD2 CE2 doub Y N 470 TYR CD2 HD2 sing N N 471 TYR CE1 CZ doub Y N 472 TYR CE1 HE1 sing N N 473 TYR CE2 CZ sing Y N 474 TYR CE2 HE2 sing N N 475 TYR CZ OH sing N N 476 TYR OH HH sing N N 477 TYR OXT HXT sing N N 478 VAL N CA sing N N 479 VAL N H sing N N 480 VAL N H2 sing N N 481 VAL CA C sing N N 482 VAL CA CB sing N N 483 VAL CA HA sing N N 484 VAL C O doub N N 485 VAL C OXT sing N N 486 VAL CB CG1 sing N N 487 VAL CB CG2 sing N N 488 VAL CB HB sing N N 489 VAL CG1 HG11 sing N N 490 VAL CG1 HG12 sing N N 491 VAL CG1 HG13 sing N N 492 VAL CG2 HG21 sing N N 493 VAL CG2 HG22 sing N N 494 VAL CG2 HG23 sing N N 495 VAL OXT HXT sing N N 496 # _atom_sites.entry_id 1FFI _atom_sites.fract_transf_matrix[1][1] 0.017312 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011686 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.021594 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_