data_1FHK # _entry.id 1FHK # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.392 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1FHK pdb_00001fhk 10.2210/pdb1fhk/pdb RCSB RCSB011593 ? ? WWPDB D_1000011593 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2001-03-21 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-02-23 5 'Structure model' 1 4 2024-05-22 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 5 'Structure model' 'Data collection' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_struct_assembly 4 4 'Structure model' pdbx_struct_oper_list 5 5 'Structure model' chem_comp_atom 6 5 'Structure model' chem_comp_bond # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1FHK _pdbx_database_status.recvd_initial_deposition_date 2000-08-01 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Morosyuk, S.V.' 1 'Cunningham, P.R.' 2 'SantaLucia Jr., J.' 3 # _citation.id primary _citation.title 'Structure and function of the conserved 690 hairpin in Escherichia coli 16 S ribosomal RNA. II. NMR solution structure.' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 307 _citation.page_first 197 _citation.page_last 211 _citation.year 2001 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 11243814 _citation.pdbx_database_id_DOI 10.1006/jmbi.2000.4431 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Morosyuk, S.V.' 1 ? primary 'Cunningham, P.R.' 2 ? primary 'SantaLucia Jr., J.' 3 ? # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description ;RNA (5'-R(*GP*GP*CP*GP*GP*UP*GP*AP*AP*AP*UP*GP*CP*C)-3') ; _entity.formula_weight 4541.771 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code GGCGGUGAAAUGCC _entity_poly.pdbx_seq_one_letter_code_can GGCGGUGAAAUGCC _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 G n 1 3 C n 1 4 G n 1 5 G n 1 6 U n 1 7 G n 1 8 A n 1 9 A n 1 10 A n 1 11 U n 1 12 G n 1 13 C n 1 14 C n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'T7 RNA polymerase run-off transcription and chemical synthesis' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 1 1 G G A . n A 1 2 G 2 2 2 G G A . n A 1 3 C 3 3 3 C C A . n A 1 4 G 4 4 4 G G A . n A 1 5 G 5 5 5 G G A . n A 1 6 U 6 6 6 U U A . n A 1 7 G 7 7 7 G G A . n A 1 8 A 8 8 8 A A A . n A 1 9 A 9 9 9 A A A . n A 1 10 A 10 10 10 A A A . n A 1 11 U 11 11 11 U U A . n A 1 12 G 12 12 12 G G A . n A 1 13 C 13 13 13 C C A . n A 1 14 C 14 14 14 C C A . n # _cell.entry_id 1FHK _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1FHK _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # _exptl.entry_id 1FHK _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _database_PDB_matrix.entry_id 1FHK _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1FHK _struct.title 'NMR STRUCTURE OF THE 690 LOOP OF 16 S RRNA OF E. COLI' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1FHK _struct_keywords.pdbx_keywords RNA _struct_keywords.text '690 loop of 16S, ribosomal RNA, RNA' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 1FHK _struct_ref.pdbx_db_accession 1FHK _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1FHK _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 14 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 1FHK _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 14 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 14 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A G 1 N1 ? ? ? 1_555 A C 14 N3 ? ? A G 1 A C 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A G 1 N2 ? ? ? 1_555 A C 14 O2 ? ? A G 1 A C 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A G 1 O6 ? ? ? 1_555 A C 14 N4 ? ? A G 1 A C 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A G 2 N1 ? ? ? 1_555 A C 13 N3 ? ? A G 2 A C 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A G 2 N2 ? ? ? 1_555 A C 13 O2 ? ? A G 2 A C 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A G 2 O6 ? ? ? 1_555 A C 13 N4 ? ? A G 2 A C 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A C 3 N3 ? ? ? 1_555 A G 12 N1 ? ? A C 3 A G 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A C 3 N4 ? ? ? 1_555 A G 12 O6 ? ? A C 3 A G 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A C 3 O2 ? ? ? 1_555 A G 12 N2 ? ? A C 3 A G 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A G 4 N2 ? ? ? 1_555 A U 11 O4 ? ? A G 4 A U 11 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog11 hydrog ? ? A G 5 N2 ? ? ? 1_555 A A 9 N7 ? ? A G 5 A A 9 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog12 hydrog ? ? A G 5 N2 ? ? ? 1_555 A A 10 N7 ? ? A G 5 A A 10 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 4 N3 A C 3 ? ? C4 A C 3 ? ? 1.398 1.335 0.063 0.007 N 2 4 C4 A C 3 ? ? C5 A C 3 ? ? 1.340 1.425 -0.085 0.008 N 3 8 N3 A C 3 ? ? C4 A C 3 ? ? 1.288 1.335 -0.047 0.007 N 4 10 N3 A C 14 ? ? C4 A C 14 ? ? 1.389 1.335 0.054 0.007 N 5 10 C4 A C 14 ? ? C5 A C 14 ? ? 1.347 1.425 -0.078 0.008 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A C 3 ? ? "C1'" A C 3 ? ? N1 A C 3 ? ? 113.35 108.50 4.85 0.70 N 2 1 "C4'" A U 6 ? ? "C3'" A U 6 ? ? "C2'" A U 6 ? ? 96.04 102.60 -6.56 1.00 N 3 1 "O4'" A U 6 ? ? "C1'" A U 6 ? ? N1 A U 6 ? ? 113.43 108.50 4.93 0.70 N 4 1 C5 A A 8 ? ? C6 A A 8 ? ? N1 A A 8 ? ? 121.24 117.70 3.54 0.50 N 5 1 N1 A A 8 ? ? C6 A A 8 ? ? N6 A A 8 ? ? 114.71 118.60 -3.89 0.60 N 6 1 C5 A A 9 ? ? C6 A A 9 ? ? N1 A A 9 ? ? 120.99 117.70 3.29 0.50 N 7 1 N1 A A 9 ? ? C6 A A 9 ? ? N6 A A 9 ? ? 114.88 118.60 -3.72 0.60 N 8 1 "O4'" A A 10 ? ? "C1'" A A 10 ? ? N9 A A 10 ? ? 112.70 108.50 4.20 0.70 N 9 1 C4 A A 10 ? ? C5 A A 10 ? ? C6 A A 10 ? ? 113.63 117.00 -3.37 0.50 N 10 1 C5 A A 10 ? ? C6 A A 10 ? ? N1 A A 10 ? ? 120.81 117.70 3.11 0.50 N 11 1 N1 A A 10 ? ? C6 A A 10 ? ? N6 A A 10 ? ? 113.50 118.60 -5.10 0.60 N 12 2 "O4'" A C 3 ? ? "C1'" A C 3 ? ? N1 A C 3 ? ? 113.34 108.50 4.84 0.70 N 13 2 "C4'" A U 6 ? ? "C3'" A U 6 ? ? "C2'" A U 6 ? ? 96.04 102.60 -6.56 1.00 N 14 2 "O4'" A U 6 ? ? "C1'" A U 6 ? ? N1 A U 6 ? ? 113.44 108.50 4.94 0.70 N 15 2 C5 A A 8 ? ? C6 A A 8 ? ? N1 A A 8 ? ? 121.23 117.70 3.53 0.50 N 16 2 N1 A A 8 ? ? C6 A A 8 ? ? N6 A A 8 ? ? 114.67 118.60 -3.93 0.60 N 17 2 C5 A A 9 ? ? C6 A A 9 ? ? N1 A A 9 ? ? 120.99 117.70 3.29 0.50 N 18 2 N1 A A 9 ? ? C6 A A 9 ? ? N6 A A 9 ? ? 114.92 118.60 -3.68 0.60 N 19 2 "O4'" A A 10 ? ? "C1'" A A 10 ? ? N9 A A 10 ? ? 112.70 108.50 4.20 0.70 N 20 2 C4 A A 10 ? ? C5 A A 10 ? ? C6 A A 10 ? ? 113.60 117.00 -3.40 0.50 N 21 2 C5 A A 10 ? ? C6 A A 10 ? ? N1 A A 10 ? ? 120.85 117.70 3.15 0.50 N 22 2 N1 A A 10 ? ? C6 A A 10 ? ? N6 A A 10 ? ? 113.53 118.60 -5.07 0.60 N 23 3 "O4'" A C 3 ? ? "C1'" A C 3 ? ? N1 A C 3 ? ? 112.89 108.50 4.39 0.70 N 24 3 "O4'" A U 6 ? ? "C1'" A U 6 ? ? N1 A U 6 ? ? 113.32 108.50 4.82 0.70 N 25 3 C4 A A 8 ? ? C5 A A 8 ? ? C6 A A 8 ? ? 113.48 117.00 -3.52 0.50 N 26 3 C5 A A 8 ? ? C6 A A 8 ? ? N1 A A 8 ? ? 121.62 117.70 3.92 0.50 N 27 3 N1 A A 8 ? ? C6 A A 8 ? ? N6 A A 8 ? ? 112.51 118.60 -6.09 0.60 N 28 3 C5 A A 10 ? ? C6 A A 10 ? ? N1 A A 10 ? ? 121.44 117.70 3.74 0.50 N 29 3 "O4'" A U 11 ? ? "C1'" A U 11 ? ? N1 A U 11 ? ? 113.03 108.50 4.53 0.70 N 30 3 N3 A C 14 ? ? C2 A C 14 ? ? O2 A C 14 ? ? 116.28 121.90 -5.62 0.70 N 31 4 "O4'" A C 3 ? ? "C1'" A C 3 ? ? N1 A C 3 ? ? 115.69 108.50 7.19 0.70 N 32 4 N3 A C 3 ? ? C4 A C 3 ? ? N4 A C 3 ? ? 111.21 118.00 -6.79 0.70 N 33 4 C5 A C 3 ? ? C4 A C 3 ? ? N4 A C 3 ? ? 125.42 120.20 5.22 0.70 N 34 4 "C4'" A U 6 ? ? "C3'" A U 6 ? ? "C2'" A U 6 ? ? 96.43 102.60 -6.17 1.00 N 35 4 C4 A A 8 ? ? C5 A A 8 ? ? C6 A A 8 ? ? 113.98 117.00 -3.02 0.50 N 36 4 C5 A A 8 ? ? C6 A A 8 ? ? N1 A A 8 ? ? 121.20 117.70 3.50 0.50 N 37 4 N1 A A 8 ? ? C6 A A 8 ? ? N6 A A 8 ? ? 113.70 118.60 -4.90 0.60 N 38 4 C5 A A 9 ? ? C6 A A 9 ? ? N1 A A 9 ? ? 121.39 117.70 3.69 0.50 N 39 4 N1 A A 9 ? ? C6 A A 9 ? ? N6 A A 9 ? ? 114.29 118.60 -4.31 0.60 N 40 4 C5 A A 10 ? ? C6 A A 10 ? ? N1 A A 10 ? ? 121.04 117.70 3.34 0.50 N 41 4 N1 A A 10 ? ? C6 A A 10 ? ? N6 A A 10 ? ? 114.94 118.60 -3.66 0.60 N 42 4 "O4'" A U 11 ? ? "C1'" A U 11 ? ? N1 A U 11 ? ? 116.77 108.50 8.27 0.70 N 43 4 C5 A U 11 ? ? C6 A U 11 ? ? N1 A U 11 ? ? 119.56 122.70 -3.14 0.50 N 44 4 N3 A C 13 ? ? C2 A C 13 ? ? O2 A C 13 ? ? 117.30 121.90 -4.60 0.70 N 45 5 "O4'" A C 3 ? ? "C1'" A C 3 ? ? N1 A C 3 ? ? 113.68 108.50 5.18 0.70 N 46 5 N3 A C 3 ? ? C2 A C 3 ? ? O2 A C 3 ? ? 116.85 121.90 -5.05 0.70 N 47 5 "O4'" A U 6 ? ? "C1'" A U 6 ? ? N1 A U 6 ? ? 112.71 108.50 4.21 0.70 N 48 5 C4 A A 8 ? ? C5 A A 8 ? ? C6 A A 8 ? ? 113.94 117.00 -3.06 0.50 N 49 5 C5 A A 8 ? ? C6 A A 8 ? ? N1 A A 8 ? ? 121.34 117.70 3.64 0.50 N 50 5 N1 A A 8 ? ? C6 A A 8 ? ? N6 A A 8 ? ? 113.61 118.60 -4.99 0.60 N 51 5 C5 A A 9 ? ? C6 A A 9 ? ? N1 A A 9 ? ? 120.96 117.70 3.26 0.50 N 52 5 "O4'" A U 11 ? ? "C1'" A U 11 ? ? N1 A U 11 ? ? 114.53 108.50 6.03 0.70 N 53 5 N3 A C 13 ? ? C2 A C 13 ? ? O2 A C 13 ? ? 117.02 121.90 -4.88 0.70 N 54 6 "O4'" A C 3 ? ? "C1'" A C 3 ? ? N1 A C 3 ? ? 113.19 108.50 4.69 0.70 N 55 6 N3 A C 3 ? ? C2 A C 3 ? ? O2 A C 3 ? ? 117.56 121.90 -4.34 0.70 N 56 6 N1 A G 5 ? ? C6 A G 5 ? ? O6 A G 5 ? ? 116.27 119.90 -3.63 0.60 N 57 6 "O4'" A A 8 ? ? "C1'" A A 8 ? ? N9 A A 8 ? ? 113.13 108.50 4.63 0.70 N 58 6 C4 A A 8 ? ? C5 A A 8 ? ? C6 A A 8 ? ? 113.69 117.00 -3.31 0.50 N 59 6 C5 A A 8 ? ? C6 A A 8 ? ? N1 A A 8 ? ? 121.48 117.70 3.78 0.50 N 60 6 N1 A A 8 ? ? C6 A A 8 ? ? N6 A A 8 ? ? 113.72 118.60 -4.88 0.60 N 61 6 C5 A A 9 ? ? C6 A A 9 ? ? N1 A A 9 ? ? 121.37 117.70 3.67 0.50 N 62 6 N1 A A 9 ? ? C6 A A 9 ? ? N6 A A 9 ? ? 113.40 118.60 -5.20 0.60 N 63 6 C5 A A 10 ? ? C6 A A 10 ? ? N1 A A 10 ? ? 121.14 117.70 3.44 0.50 N 64 6 N1 A A 10 ? ? C6 A A 10 ? ? N6 A A 10 ? ? 113.95 118.60 -4.65 0.60 N 65 6 "O4'" A U 11 ? ? "C1'" A U 11 ? ? N1 A U 11 ? ? 113.69 108.50 5.19 0.70 N 66 6 N3 A C 13 ? ? C2 A C 13 ? ? O2 A C 13 ? ? 117.65 121.90 -4.25 0.70 N 67 6 N1 A C 14 ? ? C2 A C 14 ? ? O2 A C 14 ? ? 122.92 118.90 4.02 0.60 N 68 6 N3 A C 14 ? ? C2 A C 14 ? ? O2 A C 14 ? ? 115.75 121.90 -6.15 0.70 N 69 6 N3 A C 14 ? ? C4 A C 14 ? ? N4 A C 14 ? ? 111.61 118.00 -6.39 0.70 N 70 6 C5 A C 14 ? ? C4 A C 14 ? ? N4 A C 14 ? ? 124.73 120.20 4.53 0.70 N 71 7 "O4'" A C 3 ? ? "C1'" A C 3 ? ? N1 A C 3 ? ? 113.08 108.50 4.58 0.70 N 72 7 N1 A G 5 ? ? C6 A G 5 ? ? O6 A G 5 ? ? 116.20 119.90 -3.70 0.60 N 73 7 "C4'" A U 6 ? ? "C3'" A U 6 ? ? "C2'" A U 6 ? ? 95.66 102.60 -6.94 1.00 N 74 7 "O4'" A U 6 ? ? "C1'" A U 6 ? ? N1 A U 6 ? ? 113.16 108.50 4.66 0.70 N 75 7 C5 A A 8 ? ? C6 A A 8 ? ? N1 A A 8 ? ? 121.17 117.70 3.47 0.50 N 76 7 N1 A A 8 ? ? C6 A A 8 ? ? N6 A A 8 ? ? 112.86 118.60 -5.74 0.60 N 77 7 C5 A A 9 ? ? C6 A A 9 ? ? N1 A A 9 ? ? 121.35 117.70 3.65 0.50 N 78 7 "O4'" A A 10 ? ? "C1'" A A 10 ? ? N9 A A 10 ? ? 113.54 108.50 5.04 0.70 N 79 7 C5 A A 10 ? ? C6 A A 10 ? ? N1 A A 10 ? ? 121.29 117.70 3.59 0.50 N 80 7 N1 A A 10 ? ? C6 A A 10 ? ? N6 A A 10 ? ? 114.23 118.60 -4.37 0.60 N 81 7 "O4'" A U 11 ? ? "C1'" A U 11 ? ? N1 A U 11 ? ? 115.03 108.50 6.53 0.70 N 82 7 N3 A C 13 ? ? C2 A C 13 ? ? O2 A C 13 ? ? 117.68 121.90 -4.22 0.70 N 83 7 N3 A C 14 ? ? C2 A C 14 ? ? O2 A C 14 ? ? 117.67 121.90 -4.23 0.70 N 84 8 "O4'" A C 3 ? ? "C1'" A C 3 ? ? N1 A C 3 ? ? 114.63 108.50 6.13 0.70 N 85 8 "O4'" A U 6 ? ? "C1'" A U 6 ? ? N1 A U 6 ? ? 113.33 108.50 4.83 0.70 N 86 8 "O4'" A A 8 ? ? "C1'" A A 8 ? ? N9 A A 8 ? ? 113.33 108.50 4.83 0.70 N 87 8 C5 A A 8 ? ? C6 A A 8 ? ? N1 A A 8 ? ? 120.85 117.70 3.15 0.50 N 88 8 N1 A A 8 ? ? C6 A A 8 ? ? N6 A A 8 ? ? 113.87 118.60 -4.73 0.60 N 89 8 C5 A A 9 ? ? C6 A A 9 ? ? N1 A A 9 ? ? 120.79 117.70 3.09 0.50 N 90 8 N1 A A 9 ? ? C6 A A 9 ? ? N6 A A 9 ? ? 113.54 118.60 -5.06 0.60 N 91 8 C5 A A 10 ? ? C6 A A 10 ? ? N1 A A 10 ? ? 121.01 117.70 3.31 0.50 N 92 8 N1 A A 10 ? ? C6 A A 10 ? ? N6 A A 10 ? ? 114.66 118.60 -3.94 0.60 N 93 8 "O4'" A U 11 ? ? "C1'" A U 11 ? ? N1 A U 11 ? ? 113.14 108.50 4.64 0.70 N 94 8 "O4'" A C 14 ? ? "C1'" A C 14 ? ? N1 A C 14 ? ? 112.95 108.50 4.45 0.70 N 95 9 N3 A G 2 ? ? C2 A G 2 ? ? N2 A G 2 ? ? 115.48 119.90 -4.42 0.70 N 96 9 N3 A C 3 ? ? C2 A C 3 ? ? O2 A C 3 ? ? 117.61 121.90 -4.29 0.70 N 97 9 "O4'" A U 6 ? ? "C1'" A U 6 ? ? N1 A U 6 ? ? 113.06 108.50 4.56 0.70 N 98 9 "O4'" A A 8 ? ? "C1'" A A 8 ? ? N9 A A 8 ? ? 113.83 108.50 5.33 0.70 N 99 9 C4 A A 8 ? ? C5 A A 8 ? ? C6 A A 8 ? ? 113.87 117.00 -3.13 0.50 N 100 9 C5 A A 8 ? ? C6 A A 8 ? ? N1 A A 8 ? ? 121.33 117.70 3.63 0.50 N 101 9 N1 A A 8 ? ? C6 A A 8 ? ? N6 A A 8 ? ? 114.24 118.60 -4.36 0.60 N 102 9 C5 A A 9 ? ? C6 A A 9 ? ? N1 A A 9 ? ? 121.03 117.70 3.33 0.50 N 103 9 C5 A A 10 ? ? C6 A A 10 ? ? N1 A A 10 ? ? 120.84 117.70 3.14 0.50 N 104 9 N1 A A 10 ? ? C6 A A 10 ? ? N6 A A 10 ? ? 114.62 118.60 -3.98 0.60 N 105 9 "O4'" A U 11 ? ? "C1'" A U 11 ? ? N1 A U 11 ? ? 114.81 108.50 6.31 0.70 N 106 9 N3 A C 14 ? ? C2 A C 14 ? ? O2 A C 14 ? ? 116.86 121.90 -5.04 0.70 N 107 10 "O4'" A U 6 ? ? "C1'" A U 6 ? ? N1 A U 6 ? ? 113.66 108.50 5.16 0.70 N 108 10 C4 A A 8 ? ? C5 A A 8 ? ? C6 A A 8 ? ? 113.75 117.00 -3.25 0.50 N 109 10 C5 A A 8 ? ? C6 A A 8 ? ? N1 A A 8 ? ? 120.78 117.70 3.08 0.50 N 110 10 N1 A A 8 ? ? C6 A A 8 ? ? N6 A A 8 ? ? 114.41 118.60 -4.19 0.60 N 111 10 C5 A A 9 ? ? C6 A A 9 ? ? N1 A A 9 ? ? 121.15 117.70 3.45 0.50 N 112 10 N1 A A 9 ? ? C6 A A 9 ? ? N6 A A 9 ? ? 114.54 118.60 -4.06 0.60 N 113 10 C5 A A 10 ? ? C6 A A 10 ? ? N1 A A 10 ? ? 120.90 117.70 3.20 0.50 N 114 10 N1 A A 10 ? ? C6 A A 10 ? ? N6 A A 10 ? ? 114.97 118.60 -3.63 0.60 N 115 10 "O4'" A U 11 ? ? "C1'" A U 11 ? ? N1 A U 11 ? ? 114.51 108.50 6.01 0.70 N 116 10 "O4'" A C 14 ? ? "C1'" A C 14 ? ? N1 A C 14 ? ? 116.20 108.50 7.70 0.70 N 117 10 N3 A C 14 ? ? C4 A C 14 ? ? N4 A C 14 ? ? 109.85 118.00 -8.15 0.70 N 118 10 C5 A C 14 ? ? C4 A C 14 ? ? N4 A C 14 ? ? 127.86 120.20 7.66 0.70 N 119 11 "O4'" A C 3 ? ? "C1'" A C 3 ? ? N1 A C 3 ? ? 113.76 108.50 5.26 0.70 N 120 11 N3 A C 3 ? ? C4 A C 3 ? ? N4 A C 3 ? ? 112.81 118.00 -5.19 0.70 N 121 11 N1 A G 4 ? ? C6 A G 4 ? ? O6 A G 4 ? ? 115.77 119.90 -4.13 0.60 N 122 11 N1 A G 5 ? ? C6 A G 5 ? ? O6 A G 5 ? ? 116.16 119.90 -3.74 0.60 N 123 11 "O4'" A U 6 ? ? "C1'" A U 6 ? ? N1 A U 6 ? ? 113.99 108.50 5.49 0.70 N 124 11 "O4'" A A 8 ? ? "C1'" A A 8 ? ? N9 A A 8 ? ? 113.83 108.50 5.33 0.70 N 125 11 C4 A A 8 ? ? C5 A A 8 ? ? C6 A A 8 ? ? 113.80 117.00 -3.20 0.50 N 126 11 C5 A A 8 ? ? C6 A A 8 ? ? N1 A A 8 ? ? 121.37 117.70 3.67 0.50 N 127 11 N1 A A 8 ? ? C6 A A 8 ? ? N6 A A 8 ? ? 113.64 118.60 -4.96 0.60 N 128 11 C5 A A 9 ? ? C6 A A 9 ? ? N1 A A 9 ? ? 120.85 117.70 3.15 0.50 N 129 11 N1 A A 9 ? ? C6 A A 9 ? ? N6 A A 9 ? ? 113.79 118.60 -4.81 0.60 N 130 11 C5 A A 10 ? ? C6 A A 10 ? ? N1 A A 10 ? ? 120.81 117.70 3.11 0.50 N 131 11 N1 A A 10 ? ? C6 A A 10 ? ? N6 A A 10 ? ? 114.09 118.60 -4.51 0.60 N 132 11 "O4'" A U 11 ? ? "C1'" A U 11 ? ? N1 A U 11 ? ? 114.17 108.50 5.67 0.70 N 133 11 N3 A C 14 ? ? C4 A C 14 ? ? N4 A C 14 ? ? 113.00 118.00 -5.00 0.70 N 134 12 "O4'" A C 3 ? ? "C1'" A C 3 ? ? N1 A C 3 ? ? 114.55 108.50 6.05 0.70 N 135 12 N3 A C 3 ? ? C2 A C 3 ? ? O2 A C 3 ? ? 116.32 121.90 -5.58 0.70 N 136 12 N3 A G 5 ? ? C2 A G 5 ? ? N2 A G 5 ? ? 114.92 119.90 -4.98 0.70 N 137 12 "O4'" A U 6 ? ? "C1'" A U 6 ? ? N1 A U 6 ? ? 114.27 108.50 5.77 0.70 N 138 12 N1 A A 8 ? ? C6 A A 8 ? ? N6 A A 8 ? ? 114.68 118.60 -3.92 0.60 N 139 12 C5 A A 9 ? ? C6 A A 9 ? ? N1 A A 9 ? ? 120.85 117.70 3.15 0.50 N 140 12 N1 A A 9 ? ? C6 A A 9 ? ? N6 A A 9 ? ? 113.92 118.60 -4.68 0.60 N 141 12 C5 A A 10 ? ? C6 A A 10 ? ? N1 A A 10 ? ? 121.07 117.70 3.37 0.50 N 142 12 "O4'" A U 11 ? ? "C1'" A U 11 ? ? N1 A U 11 ? ? 113.59 108.50 5.09 0.70 N 143 12 N3 A C 13 ? ? C2 A C 13 ? ? O2 A C 13 ? ? 116.83 121.90 -5.07 0.70 N 144 12 N3 A C 14 ? ? C2 A C 14 ? ? O2 A C 14 ? ? 116.24 121.90 -5.66 0.70 N 145 13 "O4'" A U 6 ? ? "C1'" A U 6 ? ? N1 A U 6 ? ? 113.79 108.50 5.29 0.70 N 146 13 C4 A A 8 ? ? C5 A A 8 ? ? C6 A A 8 ? ? 113.51 117.00 -3.49 0.50 N 147 13 C5 A A 8 ? ? C6 A A 8 ? ? N1 A A 8 ? ? 121.14 117.70 3.44 0.50 N 148 13 N1 A A 8 ? ? C6 A A 8 ? ? N6 A A 8 ? ? 113.70 118.60 -4.90 0.60 N 149 13 C5 A A 9 ? ? C6 A A 9 ? ? N1 A A 9 ? ? 120.97 117.70 3.27 0.50 N 150 13 N1 A A 9 ? ? C6 A A 9 ? ? N6 A A 9 ? ? 114.02 118.60 -4.58 0.60 N 151 13 "O4'" A A 10 ? ? "C1'" A A 10 ? ? N9 A A 10 ? ? 113.23 108.50 4.73 0.70 N 152 13 C5 A A 10 ? ? C6 A A 10 ? ? N1 A A 10 ? ? 120.85 117.70 3.15 0.50 N 153 13 "O4'" A U 11 ? ? "C1'" A U 11 ? ? N1 A U 11 ? ? 114.27 108.50 5.77 0.70 N 154 13 N3 A C 14 ? ? C2 A C 14 ? ? O2 A C 14 ? ? 117.18 121.90 -4.72 0.70 N 155 14 "O4'" A G 2 ? ? "C1'" A G 2 ? ? N9 A G 2 ? ? 113.05 108.50 4.55 0.70 N 156 14 "O4'" A U 6 ? ? "C1'" A U 6 ? ? N1 A U 6 ? ? 113.62 108.50 5.12 0.70 N 157 14 C4 A A 8 ? ? C5 A A 8 ? ? C6 A A 8 ? ? 113.92 117.00 -3.08 0.50 N 158 14 C5 A A 8 ? ? C6 A A 8 ? ? N1 A A 8 ? ? 121.75 117.70 4.05 0.50 N 159 14 N1 A A 8 ? ? C6 A A 8 ? ? N6 A A 8 ? ? 114.77 118.60 -3.83 0.60 N 160 14 C5 A A 9 ? ? C6 A A 9 ? ? N1 A A 9 ? ? 120.88 117.70 3.18 0.50 N 161 14 N1 A A 9 ? ? C6 A A 9 ? ? N6 A A 9 ? ? 113.88 118.60 -4.72 0.60 N 162 14 C5 A A 10 ? ? C6 A A 10 ? ? N1 A A 10 ? ? 121.05 117.70 3.35 0.50 N 163 14 N1 A A 10 ? ? C6 A A 10 ? ? N6 A A 10 ? ? 114.65 118.60 -3.95 0.60 N 164 14 "O4'" A U 11 ? ? "C1'" A U 11 ? ? N1 A U 11 ? ? 113.87 108.50 5.37 0.70 N 165 14 N3 A C 14 ? ? C2 A C 14 ? ? O2 A C 14 ? ? 117.15 121.90 -4.75 0.70 N 166 15 "O4'" A G 2 ? ? "C1'" A G 2 ? ? N9 A G 2 ? ? 114.84 108.50 6.34 0.70 N 167 15 "O4'" A C 3 ? ? "C1'" A C 3 ? ? N1 A C 3 ? ? 114.67 108.50 6.17 0.70 N 168 15 N1 A G 4 ? ? C6 A G 4 ? ? O6 A G 4 ? ? 116.09 119.90 -3.81 0.60 N 169 15 "O4'" A U 6 ? ? "C1'" A U 6 ? ? N1 A U 6 ? ? 113.64 108.50 5.14 0.70 N 170 15 C4 A A 8 ? ? C5 A A 8 ? ? C6 A A 8 ? ? 113.58 117.00 -3.42 0.50 N 171 15 C5 A A 8 ? ? C6 A A 8 ? ? N1 A A 8 ? ? 121.83 117.70 4.13 0.50 N 172 15 N1 A A 8 ? ? C6 A A 8 ? ? N6 A A 8 ? ? 113.24 118.60 -5.36 0.60 N 173 15 C5 A A 9 ? ? C6 A A 9 ? ? N1 A A 9 ? ? 120.77 117.70 3.07 0.50 N 174 15 C5 A A 10 ? ? C6 A A 10 ? ? N1 A A 10 ? ? 120.85 117.70 3.15 0.50 N 175 15 "O4'" A U 11 ? ? "C1'" A U 11 ? ? N1 A U 11 ? ? 113.59 108.50 5.09 0.70 N 176 15 "O4'" A C 14 ? ? "C1'" A C 14 ? ? N1 A C 14 ? ? 113.19 108.50 4.69 0.70 N # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 G A 1 ? ? 0.086 'SIDE CHAIN' 2 1 G A 5 ? ? 0.082 'SIDE CHAIN' 3 1 U A 6 ? ? 0.069 'SIDE CHAIN' 4 1 C A 13 ? ? 0.067 'SIDE CHAIN' 5 2 G A 1 ? ? 0.086 'SIDE CHAIN' 6 2 G A 5 ? ? 0.082 'SIDE CHAIN' 7 2 U A 6 ? ? 0.069 'SIDE CHAIN' 8 2 C A 13 ? ? 0.067 'SIDE CHAIN' 9 3 G A 1 ? ? 0.071 'SIDE CHAIN' 10 3 G A 4 ? ? 0.090 'SIDE CHAIN' 11 3 G A 5 ? ? 0.061 'SIDE CHAIN' 12 3 G A 7 ? ? 0.083 'SIDE CHAIN' 13 3 C A 14 ? ? 0.140 'SIDE CHAIN' 14 4 G A 5 ? ? 0.067 'SIDE CHAIN' 15 4 G A 7 ? ? 0.069 'SIDE CHAIN' 16 4 G A 12 ? ? 0.129 'SIDE CHAIN' 17 5 G A 5 ? ? 0.088 'SIDE CHAIN' 18 5 G A 7 ? ? 0.084 'SIDE CHAIN' 19 5 G A 12 ? ? 0.077 'SIDE CHAIN' 20 5 C A 13 ? ? 0.091 'SIDE CHAIN' 21 5 C A 14 ? ? 0.057 'SIDE CHAIN' 22 6 G A 1 ? ? 0.119 'SIDE CHAIN' 23 6 G A 2 ? ? 0.055 'SIDE CHAIN' 24 6 G A 7 ? ? 0.091 'SIDE CHAIN' 25 6 C A 13 ? ? 0.093 'SIDE CHAIN' 26 7 G A 2 ? ? 0.052 'SIDE CHAIN' 27 7 G A 4 ? ? 0.054 'SIDE CHAIN' 28 7 G A 5 ? ? 0.063 'SIDE CHAIN' 29 7 G A 7 ? ? 0.077 'SIDE CHAIN' 30 7 C A 13 ? ? 0.097 'SIDE CHAIN' 31 8 G A 1 ? ? 0.114 'SIDE CHAIN' 32 8 G A 5 ? ? 0.099 'SIDE CHAIN' 33 8 U A 6 ? ? 0.077 'SIDE CHAIN' 34 8 G A 7 ? ? 0.080 'SIDE CHAIN' 35 8 C A 13 ? ? 0.074 'SIDE CHAIN' 36 9 C A 3 ? ? 0.081 'SIDE CHAIN' 37 9 G A 7 ? ? 0.077 'SIDE CHAIN' 38 9 C A 14 ? ? 0.101 'SIDE CHAIN' 39 10 G A 1 ? ? 0.099 'SIDE CHAIN' 40 10 G A 7 ? ? 0.059 'SIDE CHAIN' 41 10 G A 12 ? ? 0.125 'SIDE CHAIN' 42 10 C A 13 ? ? 0.066 'SIDE CHAIN' 43 11 G A 1 ? ? 0.069 'SIDE CHAIN' 44 11 G A 5 ? ? 0.116 'SIDE CHAIN' 45 11 U A 6 ? ? 0.101 'SIDE CHAIN' 46 11 G A 7 ? ? 0.094 'SIDE CHAIN' 47 11 G A 12 ? ? 0.136 'SIDE CHAIN' 48 11 C A 14 ? ? 0.097 'SIDE CHAIN' 49 12 G A 1 ? ? 0.088 'SIDE CHAIN' 50 12 G A 5 ? ? 0.100 'SIDE CHAIN' 51 12 U A 6 ? ? 0.097 'SIDE CHAIN' 52 12 G A 7 ? ? 0.113 'SIDE CHAIN' 53 12 A A 10 ? ? 0.059 'SIDE CHAIN' 54 12 G A 12 ? ? 0.060 'SIDE CHAIN' 55 12 C A 13 ? ? 0.089 'SIDE CHAIN' 56 13 G A 7 ? ? 0.110 'SIDE CHAIN' 57 14 U A 6 ? ? 0.088 'SIDE CHAIN' 58 14 G A 7 ? ? 0.087 'SIDE CHAIN' 59 14 A A 10 ? ? 0.076 'SIDE CHAIN' 60 14 C A 13 ? ? 0.065 'SIDE CHAIN' 61 15 G A 1 ? ? 0.082 'SIDE CHAIN' 62 15 G A 5 ? ? 0.119 'SIDE CHAIN' 63 15 U A 6 ? ? 0.134 'SIDE CHAIN' 64 15 G A 7 ? ? 0.073 'SIDE CHAIN' 65 15 C A 13 ? ? 0.092 'SIDE CHAIN' 66 15 C A 14 ? ? 0.057 'SIDE CHAIN' # _pdbx_nmr_ensemble.entry_id 1FHK _pdbx_nmr_ensemble.conformers_calculated_total_number 40 _pdbx_nmr_ensemble.conformers_submitted_total_number 15 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 1FHK _pdbx_nmr_representative.conformer_id 13 _pdbx_nmr_representative.selection_criteria ? # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 289 _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 6.5 _pdbx_nmr_exptl_sample_conditions.ionic_strength '0.05 M' _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_refine.entry_id 1FHK _pdbx_nmr_refine.method 'distance geometry' _pdbx_nmr_refine.details 'IN WATER WITH COUNTERIONS USING PME' _pdbx_nmr_refine.software_ordinal 1 # loop_ _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.classification _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal Amber 5.0 refinement 'Case, D.A. et. al.' 1 Amber 5.0 'structure solution' 'Case, D.A. et al.' 2 X-PLOR 3.1 'structure solution' Brunger 3 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 C OP3 O N N 38 C P P N N 39 C OP1 O N N 40 C OP2 O N N 41 C "O5'" O N N 42 C "C5'" C N N 43 C "C4'" C N R 44 C "O4'" O N N 45 C "C3'" C N S 46 C "O3'" O N N 47 C "C2'" C N R 48 C "O2'" O N N 49 C "C1'" C N R 50 C N1 N N N 51 C C2 C N N 52 C O2 O N N 53 C N3 N N N 54 C C4 C N N 55 C N4 N N N 56 C C5 C N N 57 C C6 C N N 58 C HOP3 H N N 59 C HOP2 H N N 60 C "H5'" H N N 61 C "H5''" H N N 62 C "H4'" H N N 63 C "H3'" H N N 64 C "HO3'" H N N 65 C "H2'" H N N 66 C "HO2'" H N N 67 C "H1'" H N N 68 C H41 H N N 69 C H42 H N N 70 C H5 H N N 71 C H6 H N N 72 G OP3 O N N 73 G P P N N 74 G OP1 O N N 75 G OP2 O N N 76 G "O5'" O N N 77 G "C5'" C N N 78 G "C4'" C N R 79 G "O4'" O N N 80 G "C3'" C N S 81 G "O3'" O N N 82 G "C2'" C N R 83 G "O2'" O N N 84 G "C1'" C N R 85 G N9 N Y N 86 G C8 C Y N 87 G N7 N Y N 88 G C5 C Y N 89 G C6 C N N 90 G O6 O N N 91 G N1 N N N 92 G C2 C N N 93 G N2 N N N 94 G N3 N N N 95 G C4 C Y N 96 G HOP3 H N N 97 G HOP2 H N N 98 G "H5'" H N N 99 G "H5''" H N N 100 G "H4'" H N N 101 G "H3'" H N N 102 G "HO3'" H N N 103 G "H2'" H N N 104 G "HO2'" H N N 105 G "H1'" H N N 106 G H8 H N N 107 G H1 H N N 108 G H21 H N N 109 G H22 H N N 110 U OP3 O N N 111 U P P N N 112 U OP1 O N N 113 U OP2 O N N 114 U "O5'" O N N 115 U "C5'" C N N 116 U "C4'" C N R 117 U "O4'" O N N 118 U "C3'" C N S 119 U "O3'" O N N 120 U "C2'" C N R 121 U "O2'" O N N 122 U "C1'" C N R 123 U N1 N N N 124 U C2 C N N 125 U O2 O N N 126 U N3 N N N 127 U C4 C N N 128 U O4 O N N 129 U C5 C N N 130 U C6 C N N 131 U HOP3 H N N 132 U HOP2 H N N 133 U "H5'" H N N 134 U "H5''" H N N 135 U "H4'" H N N 136 U "H3'" H N N 137 U "HO3'" H N N 138 U "H2'" H N N 139 U "HO2'" H N N 140 U "H1'" H N N 141 U H3 H N N 142 U H5 H N N 143 U H6 H N N 144 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 C OP3 P sing N N 40 C OP3 HOP3 sing N N 41 C P OP1 doub N N 42 C P OP2 sing N N 43 C P "O5'" sing N N 44 C OP2 HOP2 sing N N 45 C "O5'" "C5'" sing N N 46 C "C5'" "C4'" sing N N 47 C "C5'" "H5'" sing N N 48 C "C5'" "H5''" sing N N 49 C "C4'" "O4'" sing N N 50 C "C4'" "C3'" sing N N 51 C "C4'" "H4'" sing N N 52 C "O4'" "C1'" sing N N 53 C "C3'" "O3'" sing N N 54 C "C3'" "C2'" sing N N 55 C "C3'" "H3'" sing N N 56 C "O3'" "HO3'" sing N N 57 C "C2'" "O2'" sing N N 58 C "C2'" "C1'" sing N N 59 C "C2'" "H2'" sing N N 60 C "O2'" "HO2'" sing N N 61 C "C1'" N1 sing N N 62 C "C1'" "H1'" sing N N 63 C N1 C2 sing N N 64 C N1 C6 sing N N 65 C C2 O2 doub N N 66 C C2 N3 sing N N 67 C N3 C4 doub N N 68 C C4 N4 sing N N 69 C C4 C5 sing N N 70 C N4 H41 sing N N 71 C N4 H42 sing N N 72 C C5 C6 doub N N 73 C C5 H5 sing N N 74 C C6 H6 sing N N 75 G OP3 P sing N N 76 G OP3 HOP3 sing N N 77 G P OP1 doub N N 78 G P OP2 sing N N 79 G P "O5'" sing N N 80 G OP2 HOP2 sing N N 81 G "O5'" "C5'" sing N N 82 G "C5'" "C4'" sing N N 83 G "C5'" "H5'" sing N N 84 G "C5'" "H5''" sing N N 85 G "C4'" "O4'" sing N N 86 G "C4'" "C3'" sing N N 87 G "C4'" "H4'" sing N N 88 G "O4'" "C1'" sing N N 89 G "C3'" "O3'" sing N N 90 G "C3'" "C2'" sing N N 91 G "C3'" "H3'" sing N N 92 G "O3'" "HO3'" sing N N 93 G "C2'" "O2'" sing N N 94 G "C2'" "C1'" sing N N 95 G "C2'" "H2'" sing N N 96 G "O2'" "HO2'" sing N N 97 G "C1'" N9 sing N N 98 G "C1'" "H1'" sing N N 99 G N9 C8 sing Y N 100 G N9 C4 sing Y N 101 G C8 N7 doub Y N 102 G C8 H8 sing N N 103 G N7 C5 sing Y N 104 G C5 C6 sing N N 105 G C5 C4 doub Y N 106 G C6 O6 doub N N 107 G C6 N1 sing N N 108 G N1 C2 sing N N 109 G N1 H1 sing N N 110 G C2 N2 sing N N 111 G C2 N3 doub N N 112 G N2 H21 sing N N 113 G N2 H22 sing N N 114 G N3 C4 sing N N 115 U OP3 P sing N N 116 U OP3 HOP3 sing N N 117 U P OP1 doub N N 118 U P OP2 sing N N 119 U P "O5'" sing N N 120 U OP2 HOP2 sing N N 121 U "O5'" "C5'" sing N N 122 U "C5'" "C4'" sing N N 123 U "C5'" "H5'" sing N N 124 U "C5'" "H5''" sing N N 125 U "C4'" "O4'" sing N N 126 U "C4'" "C3'" sing N N 127 U "C4'" "H4'" sing N N 128 U "O4'" "C1'" sing N N 129 U "C3'" "O3'" sing N N 130 U "C3'" "C2'" sing N N 131 U "C3'" "H3'" sing N N 132 U "O3'" "HO3'" sing N N 133 U "C2'" "O2'" sing N N 134 U "C2'" "C1'" sing N N 135 U "C2'" "H2'" sing N N 136 U "O2'" "HO2'" sing N N 137 U "C1'" N1 sing N N 138 U "C1'" "H1'" sing N N 139 U N1 C2 sing N N 140 U N1 C6 sing N N 141 U C2 O2 doub N N 142 U C2 N3 sing N N 143 U N3 C4 sing N N 144 U N3 H3 sing N N 145 U C4 O4 doub N N 146 U C4 C5 sing N N 147 U C5 C6 doub N N 148 U C5 H5 sing N N 149 U C6 H6 sing N N 150 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1FHK 'double helix' 1FHK 'a-form double helix' 1FHK 'mismatched base pair' 1FHK 'internal loop' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 1 1_555 A C 14 1_555 -0.591 -0.043 -0.288 -26.798 -9.674 1.380 1 A_G1:C14_A A 1 ? A 14 ? 19 1 1 A G 2 1_555 A C 13 1_555 0.075 0.054 -0.288 -25.272 -13.552 -2.394 2 A_G2:C13_A A 2 ? A 13 ? 19 1 1 A C 3 1_555 A G 12 1_555 -0.179 -0.002 0.387 -20.006 -20.072 0.783 3 A_C3:G12_A A 3 ? A 12 ? 19 1 1 A G 4 1_555 A U 11 1_555 7.095 -2.434 1.143 -25.211 -10.853 0.856 4 A_G4:U11_A A 4 ? A 11 ? ? ? 1 A G 5 1_555 A A 10 1_555 6.929 -4.558 1.175 -6.131 -2.003 -3.764 5 A_G5:A10_A A 5 ? A 10 ? ? ? # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 1 1_555 A C 14 1_555 A G 2 1_555 A C 13 1_555 -0.066 -1.432 3.515 5.167 1.618 31.918 -2.873 1.088 3.388 2.916 -9.313 32.362 1 AA_G1G2:C13C14_AA A 1 ? A 14 ? A 2 ? A 13 ? 1 A G 2 1_555 A C 13 1_555 A C 3 1_555 A G 12 1_555 0.761 -1.497 3.197 1.437 5.976 31.002 -3.792 -1.147 2.897 11.044 -2.655 31.590 2 AA_G2C3:G12C13_AA A 2 ? A 13 ? A 3 ? A 12 ? 1 A C 3 1_555 A G 12 1_555 A G 4 1_555 A U 11 1_555 -0.073 -0.514 3.650 -0.220 5.978 63.553 -0.774 0.058 3.594 5.663 0.208 63.804 3 AA_C3G4:U11G12_AA A 3 ? A 12 ? A 4 ? A 11 ? 1 A G 4 1_555 A U 11 1_555 A G 5 1_555 A A 10 1_555 -0.117 -1.454 3.006 3.229 -3.431 32.446 -2.021 0.730 3.114 -6.101 -5.741 32.777 4 AA_G4G5:A10U11_AA A 4 ? A 11 ? A 5 ? A 10 ? # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Varian _pdbx_nmr_spectrometer.model UNITY _pdbx_nmr_spectrometer.field_strength 500 # _atom_sites.entry_id 1FHK _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P # loop_