data_1FIZ # _entry.id 1FIZ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.329 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1FIZ RCSB RCSB011625 WWPDB D_1000011625 # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1FIW _pdbx_database_related.details 'Three dimensional structure of beta-acrosin from ram spermatozoa.' _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1FIZ _pdbx_database_status.recvd_initial_deposition_date 2000-08-07 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Tranter, R.' 1 'Read, J.A.' 2 'Jones, R.' 3 'Brady, R.L.' 4 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Effector sites in the three-dimensional structure of mammalian sperm beta-acrosin.' 'Structure Fold.Des.' 8 1179 1188 2000 FODEFH UK 0969-2126 1263 ? 11080640 '10.1016/S0969-2126(00)00523-2' 1 'Three dimensional structure of beta-acrosin from ram and boar spermatozoa' Thesis ? ? ? ? ? ? ? ? 'University of Bristol (THESIS)' ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Tranter, R.' 1 ? primary 'Read, J.A.' 2 ? primary 'Jones, R.' 3 ? primary 'Brady, R.L.' 4 ? 1 'Tranter, R.' 5 ? # _cell.entry_id 1FIZ _cell.length_a 130.640 _cell.length_b 130.640 _cell.length_c 130.640 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1FIZ _symmetry.space_group_name_H-M 'P 43 3 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 212 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'BETA-ACROSIN HEAVY CHAIN' 29229.842 1 ? ? ? ? 2 polymer nat 'BETA-ACROSIN LIGHT CHAIN' 2615.991 1 ? ? ? ? 3 branched man ;beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose ; 732.682 1 ? ? ? ? 4 non-polymer syn 'SULFATE ION' 96.063 4 ? ? ? ? 5 non-polymer syn 'P-AMINO BENZAMIDINE' 136.174 1 ? ? ? ? 6 water nat water 18.015 25 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;VVGGMSAEPGAWPWMVSLQIFMYHNNRRYHTCGGILLNSHWVLTAAHCFKNKKKVTDWRLIFGANEVVWGSNKPVKPPLQ ERFVEEIIIHEKYVSGLEINDIALIKITPPVPCGPFIGPGCLPQFKAGPPRAPQTCWVTGWGYLKEKGPRTSPTLQEARV ALIDLELCNSTRWYNGRIRSTNVCAGYPRGKIDTCQGDSGGPLMCRDRAENTFVVVGITSWGVGCARAKRPGVYTSTWPY LNWIASKIGSNALQMVQLGTPPR ; ;VVGGMSAEPGAWPWMVSLQIFMYHNNRRYHTCGGILLNSHWVLTAAHCFKNKKKVTDWRLIFGANEVVWGSNKPVKPPLQ ERFVEEIIIHEKYVSGLEINDIALIKITPPVPCGPFIGPGCLPQFKAGPPRAPQTCWVTGWGYLKEKGPRTSPTLQEARV ALIDLELCNSTRWYNGRIRSTNVCAGYPRGKIDTCQGDSGGPLMCRDRAENTFVVVGITSWGVGCARAKRPGVYTSTWPY LNWIASKIGSNALQMVQLGTPPR ; A ? 2 'polypeptide(L)' no no RDNATCDGPCGLRFRQKLESGMR RDNATCDGPCGLRFRQKLESGMR L ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 VAL n 1 2 VAL n 1 3 GLY n 1 4 GLY n 1 5 MET n 1 6 SER n 1 7 ALA n 1 8 GLU n 1 9 PRO n 1 10 GLY n 1 11 ALA n 1 12 TRP n 1 13 PRO n 1 14 TRP n 1 15 MET n 1 16 VAL n 1 17 SER n 1 18 LEU n 1 19 GLN n 1 20 ILE n 1 21 PHE n 1 22 MET n 1 23 TYR n 1 24 HIS n 1 25 ASN n 1 26 ASN n 1 27 ARG n 1 28 ARG n 1 29 TYR n 1 30 HIS n 1 31 THR n 1 32 CYS n 1 33 GLY n 1 34 GLY n 1 35 ILE n 1 36 LEU n 1 37 LEU n 1 38 ASN n 1 39 SER n 1 40 HIS n 1 41 TRP n 1 42 VAL n 1 43 LEU n 1 44 THR n 1 45 ALA n 1 46 ALA n 1 47 HIS n 1 48 CYS n 1 49 PHE n 1 50 LYS n 1 51 ASN n 1 52 LYS n 1 53 LYS n 1 54 LYS n 1 55 VAL n 1 56 THR n 1 57 ASP n 1 58 TRP n 1 59 ARG n 1 60 LEU n 1 61 ILE n 1 62 PHE n 1 63 GLY n 1 64 ALA n 1 65 ASN n 1 66 GLU n 1 67 VAL n 1 68 VAL n 1 69 TRP n 1 70 GLY n 1 71 SER n 1 72 ASN n 1 73 LYS n 1 74 PRO n 1 75 VAL n 1 76 LYS n 1 77 PRO n 1 78 PRO n 1 79 LEU n 1 80 GLN n 1 81 GLU n 1 82 ARG n 1 83 PHE n 1 84 VAL n 1 85 GLU n 1 86 GLU n 1 87 ILE n 1 88 ILE n 1 89 ILE n 1 90 HIS n 1 91 GLU n 1 92 LYS n 1 93 TYR n 1 94 VAL n 1 95 SER n 1 96 GLY n 1 97 LEU n 1 98 GLU n 1 99 ILE n 1 100 ASN n 1 101 ASP n 1 102 ILE n 1 103 ALA n 1 104 LEU n 1 105 ILE n 1 106 LYS n 1 107 ILE n 1 108 THR n 1 109 PRO n 1 110 PRO n 1 111 VAL n 1 112 PRO n 1 113 CYS n 1 114 GLY n 1 115 PRO n 1 116 PHE n 1 117 ILE n 1 118 GLY n 1 119 PRO n 1 120 GLY n 1 121 CYS n 1 122 LEU n 1 123 PRO n 1 124 GLN n 1 125 PHE n 1 126 LYS n 1 127 ALA n 1 128 GLY n 1 129 PRO n 1 130 PRO n 1 131 ARG n 1 132 ALA n 1 133 PRO n 1 134 GLN n 1 135 THR n 1 136 CYS n 1 137 TRP n 1 138 VAL n 1 139 THR n 1 140 GLY n 1 141 TRP n 1 142 GLY n 1 143 TYR n 1 144 LEU n 1 145 LYS n 1 146 GLU n 1 147 LYS n 1 148 GLY n 1 149 PRO n 1 150 ARG n 1 151 THR n 1 152 SER n 1 153 PRO n 1 154 THR n 1 155 LEU n 1 156 GLN n 1 157 GLU n 1 158 ALA n 1 159 ARG n 1 160 VAL n 1 161 ALA n 1 162 LEU n 1 163 ILE n 1 164 ASP n 1 165 LEU n 1 166 GLU n 1 167 LEU n 1 168 CYS n 1 169 ASN n 1 170 SER n 1 171 THR n 1 172 ARG n 1 173 TRP n 1 174 TYR n 1 175 ASN n 1 176 GLY n 1 177 ARG n 1 178 ILE n 1 179 ARG n 1 180 SER n 1 181 THR n 1 182 ASN n 1 183 VAL n 1 184 CYS n 1 185 ALA n 1 186 GLY n 1 187 TYR n 1 188 PRO n 1 189 ARG n 1 190 GLY n 1 191 LYS n 1 192 ILE n 1 193 ASP n 1 194 THR n 1 195 CYS n 1 196 GLN n 1 197 GLY n 1 198 ASP n 1 199 SER n 1 200 GLY n 1 201 GLY n 1 202 PRO n 1 203 LEU n 1 204 MET n 1 205 CYS n 1 206 ARG n 1 207 ASP n 1 208 ARG n 1 209 ALA n 1 210 GLU n 1 211 ASN n 1 212 THR n 1 213 PHE n 1 214 VAL n 1 215 VAL n 1 216 VAL n 1 217 GLY n 1 218 ILE n 1 219 THR n 1 220 SER n 1 221 TRP n 1 222 GLY n 1 223 VAL n 1 224 GLY n 1 225 CYS n 1 226 ALA n 1 227 ARG n 1 228 ALA n 1 229 LYS n 1 230 ARG n 1 231 PRO n 1 232 GLY n 1 233 VAL n 1 234 TYR n 1 235 THR n 1 236 SER n 1 237 THR n 1 238 TRP n 1 239 PRO n 1 240 TYR n 1 241 LEU n 1 242 ASN n 1 243 TRP n 1 244 ILE n 1 245 ALA n 1 246 SER n 1 247 LYS n 1 248 ILE n 1 249 GLY n 1 250 SER n 1 251 ASN n 1 252 ALA n 1 253 LEU n 1 254 GLN n 1 255 MET n 1 256 VAL n 1 257 GLN n 1 258 LEU n 1 259 GLY n 1 260 THR n 1 261 PRO n 1 262 PRO n 1 263 ARG n 2 1 ARG n 2 2 ASP n 2 3 ASN n 2 4 ALA n 2 5 THR n 2 6 CYS n 2 7 ASP n 2 8 GLY n 2 9 PRO n 2 10 CYS n 2 11 GLY n 2 12 LEU n 2 13 ARG n 2 14 PHE n 2 15 ARG n 2 16 GLN n 2 17 LYS n 2 18 LEU n 2 19 GLU n 2 20 SER n 2 21 GLY n 2 22 MET n 2 23 ARG n # loop_ _entity_src_nat.entity_id _entity_src_nat.pdbx_src_id _entity_src_nat.pdbx_alt_source_flag _entity_src_nat.pdbx_beg_seq_num _entity_src_nat.pdbx_end_seq_num _entity_src_nat.common_name _entity_src_nat.pdbx_organism_scientific _entity_src_nat.pdbx_ncbi_taxonomy_id _entity_src_nat.genus _entity_src_nat.species _entity_src_nat.strain _entity_src_nat.tissue _entity_src_nat.tissue_fraction _entity_src_nat.pdbx_secretion _entity_src_nat.pdbx_fragment _entity_src_nat.pdbx_variant _entity_src_nat.pdbx_cell_line _entity_src_nat.pdbx_atcc _entity_src_nat.pdbx_cellular_location _entity_src_nat.pdbx_organ _entity_src_nat.pdbx_organelle _entity_src_nat.pdbx_cell _entity_src_nat.pdbx_plasmid_name _entity_src_nat.pdbx_plasmid_details _entity_src_nat.details 1 1 sample ? ? pig 'Sus scrofa' 9823 Sus ? ? ? ? ? ? ? ? ? ? TESTIS ? SPERMATOZOA ? ? ? 2 1 sample ? ? pig 'Sus scrofa' 9823 Sus ? ? ? ? ? ? ? ? ? ? TESTIS ? SPERMATOZOA ? ? ? # loop_ _struct_ref.id _struct_ref.db_code _struct_ref.db_name _struct_ref.entity_id _struct_ref.pdbx_db_accession _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_db_isoform 1 ACRO_PIG UNP 1 P08001 40 ;VVGGMSAEPGAWPWMVSLQIFMYHNNRRYHTCGGILLNSHWVLTAAHCFKNKKKVTDWRLIFGANEVVWGSNKPVKPPLQ ERFVEEIIIHEKYVSGLEINDIALIKITPPVPCGPFIGPGCLPQFKAGPPRAPQTCWVTGWGYLKEKGPRTSPTLQEARV ALIDLELCNSTRWYNGRIRSTNVCAGYPRGKIDTCQGDSGGPLMCRDRAENTFVVVGITSWGVGCARAKRPGVYTSTWPY LNWIASKIGSNALQMVQLGTPPR ; ? 2 ACRO_PIG UNP 2 P08001 17 RDNATCDGPCGLRFRQKLESGMR ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1FIZ A 1 ? 263 ? P08001 40 ? 302 ? 16 257 2 2 1FIZ L 1 ? 23 ? P08001 17 ? 39 ? 0 22 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BMA 'D-saccharide, beta linking' . beta-D-mannopyranose ? 'C6 H12 O6' 180.156 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 FUL 'L-saccharide, beta linking' . beta-L-fucopyranose 6-DEOXY-BETA-L-GALACTOSE 'C6 H12 O5' 164.156 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ? 'C8 H15 N O6' 221.208 NDG 'D-saccharide, alpha linking' . 2-acetamido-2-deoxy-alpha-D-glucopyranose ? 'C8 H15 N O6' 221.208 PBZ non-polymer . 'P-AMINO BENZAMIDINE' ? 'C7 H10 N3 1' 136.174 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1FIZ _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 57.81 _exptl_crystal.density_Matthews 2.92 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.temp 291.0 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details ;PEG 8000, ammonium sulphate, sodium cacodylate, p-aminobenzamidine, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 18K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2000-02-03 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.244 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SRS BEAMLINE PX14.1' _diffrn_source.pdbx_wavelength 1.244 _diffrn_source.pdbx_synchrotron_site SRS _diffrn_source.pdbx_synchrotron_beamline PX14.1 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1FIZ _reflns.observed_criterion_sigma_I -3.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 100 _reflns.d_resolution_high 2.9 _reflns.number_obs 8303 _reflns.number_all 8303 _reflns.percent_possible_obs 97.4 _reflns.pdbx_Rmerge_I_obs 0.078 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 18.6 _reflns.B_iso_Wilson_estimate 65.8 _reflns.pdbx_redundancy 5.9 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.9 _reflns_shell.d_res_low 3.1 _reflns_shell.percent_possible_obs ? _reflns_shell.percent_possible_all 99.8 _reflns_shell.Rmerge_I_obs 0.307 _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_redundancy 5.9 _reflns_shell.number_unique_all 1200 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1FIZ _refine.ls_number_reflns_obs 8711 _refine.ls_number_reflns_all 8941 _refine.pdbx_ls_sigma_I 2.0 _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_d_res_low 30.0 _refine.ls_d_res_high 2.9 _refine.ls_percent_reflns_obs 97.4 _refine.ls_R_factor_obs ? _refine.ls_R_factor_all 0.21409 _refine.ls_R_factor_R_work 0.21158 _refine.ls_R_factor_R_free 0.26518 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.7 _refine.ls_number_reflns_R_free 408 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean 47.027 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'maximun likelihood refinement CNS was also used for refinement.' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free 0.41073 _refine.overall_SU_B 18.17130 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_ML 0.34735 _refine.pdbx_overall_ESU_R ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2152 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 79 _refine_hist.number_atoms_solvent 25 _refine_hist.number_atoms_total 2256 _refine_hist.d_res_high 2.9 _refine_hist.d_res_low 30.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function p_bond_d 0.029 0.021 ? ? 'X-RAY DIFFRACTION' ? p_angle_d 2.650 1.986 ? ? 'X-RAY DIFFRACTION' ? p_angle_deg 2.650 1.986 ? ? 'X-RAY DIFFRACTION' ? p_mcbond_it 1.188 1.500 ? ? 'X-RAY DIFFRACTION' ? p_mcangle_it 2.239 2.000 ? ? 'X-RAY DIFFRACTION' ? p_scbond_it 3.475 3.000 ? ? 'X-RAY DIFFRACTION' ? p_scangle_it 5.641 4.500 ? ? 'X-RAY DIFFRACTION' ? p_plane_restr 0.010 0.020 ? ? 'X-RAY DIFFRACTION' ? p_chiral_restr 0.152 0.200 ? ? 'X-RAY DIFFRACTION' ? # _struct.entry_id 1FIZ _struct.title 'THREE DIMENSIONAL STRUCTURE OF BETA-ACROSIN FROM BOAR SPERMATOZOA' _struct.pdbx_descriptor 'BETA-ACROSIN HEAVY CHAIN/BETA-ACROSIN LIGHT CHAIN' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1FIZ _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'anti-parallel beta-barrel, HYDROLASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? G N N 4 ? H N N 5 ? I N N 6 ? J N N 6 ? # _struct_biol.id 1 _struct_biol.details 'heterodimer of chain A and B linked together by two disulphide bonds' _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ALA A 46 ? LYS A 50 ? ALA A 56 LYS A 60 5 ? 5 HELX_P HELX_P2 2 ASP A 164 ? SER A 170 ? ASP A 164 SER A 170 1 ? 7 HELX_P HELX_P3 3 TYR A 240 ? GLY A 249 ? TYR A 234 GLY A 243 1 ? 10 HELX_P HELX_P4 4 GLY A 249 ? MET A 255 ? GLY A 243 MET A 249 1 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 32 SG ? ? ? 1_555 A CYS 48 SG ? ? A CYS 42 A CYS 58 1_555 ? ? ? ? ? ? ? 2.070 ? ? disulf2 disulf ? ? A CYS 113 SG ? ? ? 1_555 B CYS 6 SG ? ? A CYS 114 L CYS 5 1_555 ? ? ? ? ? ? ? 2.010 ? ? disulf3 disulf ? ? A CYS 121 SG ? ? ? 1_555 B CYS 10 SG ? ? A CYS 122 L CYS 9 1_555 ? ? ? ? ? ? ? 2.104 ? ? disulf4 disulf ? ? A CYS 136 SG ? ? ? 1_555 A CYS 205 SG ? ? A CYS 136 A CYS 201 1_555 ? ? ? ? ? ? ? 1.982 ? ? disulf5 disulf ? ? A CYS 168 SG ? ? ? 1_555 A CYS 184 SG ? ? A CYS 168 A CYS 182 1_555 ? ? ? ? ? ? ? 1.981 ? ? disulf6 disulf ? ? A CYS 195 SG ? ? ? 1_555 A CYS 225 SG ? ? A CYS 191 A CYS 220 1_555 ? ? ? ? ? ? ? 2.051 ? ? covale1 covale one ? A ASN 169 ND2 ? ? ? 1_555 C NAG . C1 ? ? A ASN 169 B NAG 1 1_555 ? ? ? ? ? ? ? 1.454 ? N-Glycosylation covale2 covale both ? C NAG . O4 ? ? ? 1_555 C NDG . C1 ? ? B NAG 1 B NDG 2 1_555 ? ? ? ? ? ? ? 1.479 ? ? covale3 covale both ? C NAG . O6 ? ? ? 1_555 C FUL . C1 ? ? B NAG 1 B FUL 4 1_555 ? ? ? ? ? ? ? 1.429 ? ? covale4 covale both ? C NDG . O4 ? ? ? 1_555 C BMA . C1 ? ? B NDG 2 B BMA 3 1_555 ? ? ? ? ? ? ? 1.436 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 PRO 77 A . ? PRO 78 A PRO 78 A ? PRO 79 A 1 1.69 2 THR 108 A . ? THR 109 A PRO 109 A ? PRO 110 A 1 -2.83 3 ALA 132 A . ? ALA 132 A PRO 133 A ? PRO 133 A 1 -5.75 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 8 ? B ? 7 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel B 6 7 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 MET A 5 ? SER A 6 ? MET A 20 SER A 21 A 2 GLN A 156 ? ILE A 163 ? GLN A 156 ILE A 163 A 3 THR A 135 ? GLY A 140 ? THR A 135 GLY A 140 A 4 PRO A 202 ? ARG A 206 A PRO A 198 ARG A 201 A 5 VAL A 214 ? TRP A 221 ? VAL A 204 TRP A 215 A 6 GLY A 232 ? SER A 236 ? GLY A 226 SER A 230 A 7 ASN A 182 ? GLY A 186 ? ASN A 180 GLY A 184 A 8 GLN A 156 ? ILE A 163 ? GLN A 156 ILE A 163 B 1 MET A 15 ? MET A 22 B MET A 30 MET A 37 B 2 ARG A 27 G ASN A 38 ? ARG A 37 ASN A 48 B 3 TRP A 41 ? THR A 44 ? TRP A 51 THR A 54 B 4 ALA A 103 ? THR A 108 ? ALA A 104 THR A 109 B 5 GLN A 80 ? ILE A 89 ? GLN A 81 ILE A 90 B 6 TRP A 58 ? PHE A 62 ? TRP A 63 PHE A 66 B 7 MET A 15 ? MET A 22 B MET A 30 MET A 37 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O MET A 5 ? O MET A 20 N GLU A 157 ? N GLU A 157 A 2 3 N VAL A 160 ? N VAL A 160 O CYS A 136 ? O CYS A 136 A 3 4 N THR A 139 ? N THR A 139 O PRO A 202 ? O PRO A 198 A 4 5 N CYS A 205 ? N CYS A 201 O VAL A 214 ? O VAL A 204 A 5 6 O TRP A 221 ? O TRP A 215 N VAL A 233 ? N VAL A 227 A 6 7 N TYR A 234 ? N TYR A 228 O VAL A 183 ? O VAL A 181 A 7 8 N GLY A 186 ? N GLY A 184 O ALA A 161 ? O ALA A 161 B 1 2 N MET A 22 B N MET A 37 O ARG A 27 G O ARG A 37 B 2 3 N LEU A 37 ? N LEU A 47 O TRP A 41 ? O TRP A 51 B 3 4 O THR A 44 ? O THR A 54 N ALA A 103 ? N ALA A 104 B 4 5 N THR A 108 ? N THR A 109 O PHE A 83 ? O PHE A 84 B 5 6 O ARG A 82 ? O ARG A 83 N LEU A 60 ? N LEU A 65 B 6 7 O ILE A 61 A O ILE A 65 N SER A 17 ? N SER A 32 # _database_PDB_matrix.entry_id 1FIZ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1FIZ _atom_sites.fract_transf_matrix[1][1] 0.007655 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.007655 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007655 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _database_PDB_caveat.text 'NAG B 1 HAS WRONG CHIRALITY AT ATOM C1' # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 VAL 1 16 16 VAL VAL A . n A 1 2 VAL 2 17 17 VAL VAL A . n A 1 3 GLY 3 18 18 GLY GLY A . n A 1 4 GLY 4 19 19 GLY GLY A . n A 1 5 MET 5 20 20 MET MET A . n A 1 6 SER 6 21 21 SER SER A . n A 1 7 ALA 7 22 22 ALA ALA A . n A 1 8 GLU 8 23 23 GLU GLU A . n A 1 9 PRO 9 24 24 PRO PRO A . n A 1 10 GLY 10 25 25 GLY GLY A . n A 1 11 ALA 11 26 26 ALA ALA A . n A 1 12 TRP 12 27 27 TRP TRP A . n A 1 13 PRO 13 28 28 PRO PRO A . n A 1 14 TRP 14 29 29 TRP TRP A . n A 1 15 MET 15 30 30 MET MET A . n A 1 16 VAL 16 31 31 VAL VAL A . n A 1 17 SER 17 32 32 SER SER A . n A 1 18 LEU 18 33 33 LEU LEU A . n A 1 19 GLN 19 34 34 GLN GLN A . n A 1 20 ILE 20 37 37 ILE ILE A . n A 1 21 PHE 21 37 37 PHE PHE A A n A 1 22 MET 22 37 37 MET MET A B n A 1 23 TYR 23 37 37 TYR TYR A C n A 1 24 HIS 24 37 37 HIS HIS A D n A 1 25 ASN 25 37 37 ASN ASN A E n A 1 26 ASN 26 37 37 ASN ASN A F n A 1 27 ARG 27 37 37 ARG ARG A G n A 1 28 ARG 28 38 38 ARG ARG A . n A 1 29 TYR 29 39 39 TYR TYR A . n A 1 30 HIS 30 40 40 HIS HIS A . n A 1 31 THR 31 41 41 THR THR A . n A 1 32 CYS 32 42 42 CYS CYS A . n A 1 33 GLY 33 43 43 GLY GLY A . n A 1 34 GLY 34 44 44 GLY GLY A . n A 1 35 ILE 35 45 45 ILE ILE A . n A 1 36 LEU 36 46 46 LEU LEU A . n A 1 37 LEU 37 47 47 LEU LEU A . n A 1 38 ASN 38 48 48 ASN ASN A . n A 1 39 SER 39 49 49 SER SER A . n A 1 40 HIS 40 50 50 HIS HIS A . n A 1 41 TRP 41 51 51 TRP TRP A . n A 1 42 VAL 42 52 52 VAL VAL A . n A 1 43 LEU 43 53 53 LEU LEU A . n A 1 44 THR 44 54 54 THR THR A . n A 1 45 ALA 45 55 55 ALA ALA A . n A 1 46 ALA 46 56 56 ALA ALA A . n A 1 47 HIS 47 57 57 HIS HIS A . n A 1 48 CYS 48 58 58 CYS CYS A . n A 1 49 PHE 49 59 59 PHE PHE A . n A 1 50 LYS 50 60 60 LYS LYS A . n A 1 51 ASN 51 61 61 ASN ASN A . n A 1 52 LYS 52 61 61 LYS LYS A A n A 1 53 LYS 53 61 61 LYS LYS A B n A 1 54 LYS 54 61 61 LYS LYS A C n A 1 55 VAL 55 61 61 VAL VAL A D n A 1 56 THR 56 61 61 THR THR A E n A 1 57 ASP 57 62 62 ASP ASP A . n A 1 58 TRP 58 63 63 TRP TRP A . n A 1 59 ARG 59 64 64 ARG ARG A . n A 1 60 LEU 60 65 65 LEU LEU A . n A 1 61 ILE 61 65 65 ILE ILE A A n A 1 62 PHE 62 66 66 PHE PHE A . n A 1 63 GLY 63 69 69 GLY GLY A . n A 1 64 ALA 64 70 70 ALA ALA A . n A 1 65 ASN 65 71 71 ASN ASN A . n A 1 66 GLU 66 72 72 GLU GLU A . n A 1 67 VAL 67 73 73 VAL VAL A . n A 1 68 VAL 68 74 74 VAL VAL A . n A 1 69 TRP 69 75 75 TRP TRP A . n A 1 70 GLY 70 75 75 GLY GLY A A n A 1 71 SER 71 75 75 SER SER A B n A 1 72 ASN 72 75 75 ASN ASN A C n A 1 73 LYS 73 75 75 LYS LYS A D n A 1 74 PRO 74 75 75 PRO PRO A E n A 1 75 VAL 75 76 76 VAL VAL A . n A 1 76 LYS 76 77 77 LYS LYS A . n A 1 77 PRO 77 78 78 PRO PRO A . n A 1 78 PRO 78 79 79 PRO PRO A . n A 1 79 LEU 79 80 80 LEU LEU A . n A 1 80 GLN 80 81 81 GLN GLN A . n A 1 81 GLU 81 82 82 GLU GLU A . n A 1 82 ARG 82 83 83 ARG ARG A . n A 1 83 PHE 83 84 84 PHE PHE A . n A 1 84 VAL 84 85 85 VAL VAL A . n A 1 85 GLU 85 86 86 GLU GLU A . n A 1 86 GLU 86 87 87 GLU GLU A . n A 1 87 ILE 87 88 88 ILE ILE A . n A 1 88 ILE 88 89 89 ILE ILE A . n A 1 89 ILE 89 90 90 ILE ILE A . n A 1 90 HIS 90 91 91 HIS HIS A . n A 1 91 GLU 91 92 92 GLU GLU A . n A 1 92 LYS 92 93 93 LYS LYS A . n A 1 93 TYR 93 94 94 TYR TYR A . n A 1 94 VAL 94 95 95 VAL VAL A . n A 1 95 SER 95 96 96 SER SER A . n A 1 96 GLY 96 97 97 GLY GLY A . n A 1 97 LEU 97 98 98 LEU LEU A . n A 1 98 GLU 98 99 99 GLU GLU A . n A 1 99 ILE 99 100 100 ILE ILE A . n A 1 100 ASN 100 101 101 ASN ASN A . n A 1 101 ASP 101 102 102 ASP ASP A . n A 1 102 ILE 102 103 103 ILE ILE A . n A 1 103 ALA 103 104 104 ALA ALA A . n A 1 104 LEU 104 105 105 LEU LEU A . n A 1 105 ILE 105 106 106 ILE ILE A . n A 1 106 LYS 106 107 107 LYS LYS A . n A 1 107 ILE 107 108 108 ILE ILE A . n A 1 108 THR 108 109 109 THR THR A . n A 1 109 PRO 109 110 110 PRO PRO A . n A 1 110 PRO 110 111 111 PRO PRO A . n A 1 111 VAL 111 112 112 VAL VAL A . n A 1 112 PRO 112 113 113 PRO PRO A . n A 1 113 CYS 113 114 114 CYS CYS A . n A 1 114 GLY 114 115 115 GLY GLY A . n A 1 115 PRO 115 116 116 PRO PRO A . n A 1 116 PHE 116 117 117 PHE PHE A . n A 1 117 ILE 117 118 118 ILE ILE A . n A 1 118 GLY 118 119 119 GLY GLY A . n A 1 119 PRO 119 120 120 PRO PRO A . n A 1 120 GLY 120 121 121 GLY GLY A . n A 1 121 CYS 121 122 122 CYS CYS A . n A 1 122 LEU 122 123 123 LEU LEU A . n A 1 123 PRO 123 124 124 PRO PRO A . n A 1 124 GLN 124 125 125 GLN GLN A . n A 1 125 PHE 125 126 126 PHE PHE A . n A 1 126 LYS 126 126 126 LYS LYS A A n A 1 127 ALA 127 126 126 ALA ALA A B n A 1 128 GLY 128 127 127 GLY GLY A . n A 1 129 PRO 129 128 128 PRO PRO A . n A 1 130 PRO 130 129 129 PRO PRO A . n A 1 131 ARG 131 130 130 ARG ARG A . n A 1 132 ALA 132 132 132 ALA ALA A . n A 1 133 PRO 133 133 133 PRO PRO A . n A 1 134 GLN 134 134 134 GLN GLN A . n A 1 135 THR 135 135 135 THR THR A . n A 1 136 CYS 136 136 136 CYS CYS A . n A 1 137 TRP 137 137 137 TRP TRP A . n A 1 138 VAL 138 138 138 VAL VAL A . n A 1 139 THR 139 139 139 THR THR A . n A 1 140 GLY 140 140 140 GLY GLY A . n A 1 141 TRP 141 141 141 TRP TRP A . n A 1 142 GLY 142 142 142 GLY GLY A . n A 1 143 TYR 143 143 143 TYR TYR A . n A 1 144 LEU 144 144 144 LEU LEU A . n A 1 145 LYS 145 145 145 LYS LYS A . n A 1 146 GLU 146 146 146 GLU GLU A . n A 1 147 LYS 147 147 147 LYS LYS A . n A 1 148 GLY 148 148 148 GLY GLY A . n A 1 149 PRO 149 149 149 PRO PRO A . n A 1 150 ARG 150 150 150 ARG ARG A . n A 1 151 THR 151 151 151 THR THR A . n A 1 152 SER 152 152 152 SER SER A . n A 1 153 PRO 153 153 153 PRO PRO A . n A 1 154 THR 154 154 154 THR THR A . n A 1 155 LEU 155 155 155 LEU LEU A . n A 1 156 GLN 156 156 156 GLN GLN A . n A 1 157 GLU 157 157 157 GLU GLU A . n A 1 158 ALA 158 158 158 ALA ALA A . n A 1 159 ARG 159 159 159 ARG ARG A . n A 1 160 VAL 160 160 160 VAL VAL A . n A 1 161 ALA 161 161 161 ALA ALA A . n A 1 162 LEU 162 162 162 LEU LEU A . n A 1 163 ILE 163 163 163 ILE ILE A . n A 1 164 ASP 164 164 164 ASP ASP A . n A 1 165 LEU 165 165 165 LEU LEU A . n A 1 166 GLU 166 166 166 GLU GLU A . n A 1 167 LEU 167 167 167 LEU LEU A . n A 1 168 CYS 168 168 168 CYS CYS A . n A 1 169 ASN 169 169 169 ASN ASN A . n A 1 170 SER 170 170 170 SER SER A . n A 1 171 THR 171 170 170 THR THR A A n A 1 172 ARG 172 170 170 ARG ARG A B n A 1 173 TRP 173 171 171 TRP TRP A . n A 1 174 TYR 174 172 172 TYR TYR A . n A 1 175 ASN 175 173 173 ASN ASN A . n A 1 176 GLY 176 174 174 GLY GLY A . n A 1 177 ARG 177 175 175 ARG ARG A . n A 1 178 ILE 178 176 176 ILE ILE A . n A 1 179 ARG 179 177 177 ARG ARG A . n A 1 180 SER 180 178 178 SER SER A . n A 1 181 THR 181 179 179 THR THR A . n A 1 182 ASN 182 180 180 ASN ASN A . n A 1 183 VAL 183 181 181 VAL VAL A . n A 1 184 CYS 184 182 182 CYS CYS A . n A 1 185 ALA 185 183 183 ALA ALA A . n A 1 186 GLY 186 184 184 GLY GLY A . n A 1 187 TYR 187 184 184 TYR TYR A A n A 1 188 PRO 188 185 185 PRO PRO A . n A 1 189 ARG 189 186 186 ARG ARG A . n A 1 190 GLY 190 187 187 GLY GLY A . n A 1 191 LYS 191 188 188 LYS LYS A . n A 1 192 ILE 192 188 188 ILE ILE A A n A 1 193 ASP 193 189 189 ASP ASP A . n A 1 194 THR 194 190 190 THR THR A . n A 1 195 CYS 195 191 191 CYS CYS A . n A 1 196 GLN 196 192 192 GLN GLN A . n A 1 197 GLY 197 193 193 GLY GLY A . n A 1 198 ASP 198 194 194 ASP ASP A . n A 1 199 SER 199 195 195 SER SER A . n A 1 200 GLY 200 196 196 GLY GLY A . n A 1 201 GLY 201 197 197 GLY GLY A . n A 1 202 PRO 202 198 198 PRO PRO A . n A 1 203 LEU 203 199 199 LEU LEU A . n A 1 204 MET 204 200 200 MET MET A . n A 1 205 CYS 205 201 201 CYS CYS A . n A 1 206 ARG 206 201 201 ARG ARG A A n A 1 207 ASP 207 201 201 ASP ASP A B n A 1 208 ARG 208 202 202 ARG ARG A . n A 1 209 ALA 209 202 202 ALA ALA A A n A 1 210 GLU 210 202 202 GLU GLU A B n A 1 211 ASN 211 202 202 ASN ASN A C n A 1 212 THR 212 202 202 THR THR A D n A 1 213 PHE 213 203 203 PHE PHE A . n A 1 214 VAL 214 204 204 VAL VAL A . n A 1 215 VAL 215 209 209 VAL VAL A . n A 1 216 VAL 216 210 210 VAL VAL A . n A 1 217 GLY 217 211 211 GLY GLY A . n A 1 218 ILE 218 212 212 ILE ILE A . n A 1 219 THR 219 213 213 THR THR A . n A 1 220 SER 220 214 214 SER SER A . n A 1 221 TRP 221 215 215 TRP TRP A . n A 1 222 GLY 222 216 216 GLY GLY A . n A 1 223 VAL 223 217 217 VAL VAL A . n A 1 224 GLY 224 219 219 GLY GLY A . n A 1 225 CYS 225 220 220 CYS CYS A . n A 1 226 ALA 226 221 221 ALA ALA A . n A 1 227 ARG 227 221 221 ARG ARG A A n A 1 228 ALA 228 222 222 ALA ALA A . n A 1 229 LYS 229 223 223 LYS LYS A . n A 1 230 ARG 230 224 224 ARG ARG A . n A 1 231 PRO 231 225 225 PRO PRO A . n A 1 232 GLY 232 226 226 GLY GLY A . n A 1 233 VAL 233 227 227 VAL VAL A . n A 1 234 TYR 234 228 228 TYR TYR A . n A 1 235 THR 235 229 229 THR THR A . n A 1 236 SER 236 230 230 SER SER A . n A 1 237 THR 237 231 231 THR THR A . n A 1 238 TRP 238 232 232 TRP TRP A . n A 1 239 PRO 239 233 233 PRO PRO A . n A 1 240 TYR 240 234 234 TYR TYR A . n A 1 241 LEU 241 235 235 LEU LEU A . n A 1 242 ASN 242 236 236 ASN ASN A . n A 1 243 TRP 243 237 237 TRP TRP A . n A 1 244 ILE 244 238 238 ILE ILE A . n A 1 245 ALA 245 239 239 ALA ALA A . n A 1 246 SER 246 240 240 SER SER A . n A 1 247 LYS 247 241 241 LYS LYS A . n A 1 248 ILE 248 242 242 ILE ILE A . n A 1 249 GLY 249 243 243 GLY GLY A . n A 1 250 SER 250 244 244 SER SER A . n A 1 251 ASN 251 245 245 ASN ASN A . n A 1 252 ALA 252 246 246 ALA ALA A . n A 1 253 LEU 253 247 247 LEU LEU A . n A 1 254 GLN 254 248 248 GLN GLN A . n A 1 255 MET 255 249 249 MET MET A . n A 1 256 VAL 256 250 250 VAL VAL A . n A 1 257 GLN 257 251 251 GLN GLN A . n A 1 258 LEU 258 252 252 LEU LEU A . n A 1 259 GLY 259 253 253 GLY GLY A . n A 1 260 THR 260 254 254 THR THR A . n A 1 261 PRO 261 255 255 PRO PRO A . n A 1 262 PRO 262 256 256 PRO PRO A . n A 1 263 ARG 263 257 257 ARG ARG A . n B 2 1 ARG 1 0 ? ? ? L . n B 2 2 ASP 2 1 ? ? ? L . n B 2 3 ASN 3 2 ? ? ? L . n B 2 4 ALA 4 3 3 ALA ALA L . n B 2 5 THR 5 4 4 THR THR L . n B 2 6 CYS 6 5 5 CYS CYS L . n B 2 7 ASP 7 6 6 ASP ASP L . n B 2 8 GLY 8 7 7 GLY GLY L . n B 2 9 PRO 9 8 8 PRO PRO L . n B 2 10 CYS 10 9 9 CYS CYS L . n B 2 11 GLY 11 10 10 GLY GLY L . n B 2 12 LEU 12 11 11 LEU LEU L . n B 2 13 ARG 13 12 12 ARG ARG L . n B 2 14 PHE 14 13 13 PHE PHE L . n B 2 15 ARG 15 14 14 ARG ARG L . n B 2 16 GLN 16 15 15 GLN GLN L . n B 2 17 LYS 17 16 ? ? ? L . n B 2 18 LEU 18 17 ? ? ? L . n B 2 19 GLU 19 18 ? ? ? L . n B 2 20 SER 20 19 ? ? ? L . n B 2 21 GLY 21 20 ? ? ? L . n B 2 22 MET 22 21 ? ? ? L . n B 2 23 ARG 23 22 ? ? ? L . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 SO4 1 304 2 SO4 SO4 A . E 4 SO4 1 305 3 SO4 SO4 A . F 4 SO4 1 306 4 SO4 SO4 A . G 4 SO4 1 307 5 SO4 SO4 A . H 5 PBZ 1 308 1 PBZ PBZ A . I 6 HOH 1 309 1 HOH HOH A . I 6 HOH 2 310 2 HOH HOH A . I 6 HOH 3 311 3 HOH HOH A . I 6 HOH 4 312 4 HOH HOH A . I 6 HOH 5 313 5 HOH HOH A . I 6 HOH 6 314 6 HOH HOH A . I 6 HOH 7 315 7 HOH HOH A . I 6 HOH 8 316 8 HOH HOH A . I 6 HOH 9 317 9 HOH HOH A . I 6 HOH 10 318 10 HOH HOH A . I 6 HOH 11 319 11 HOH HOH A . I 6 HOH 12 320 12 HOH HOH A . I 6 HOH 13 321 13 HOH HOH A . I 6 HOH 14 322 14 HOH HOH A . I 6 HOH 15 323 15 HOH HOH A . I 6 HOH 16 324 26 HOH HOH A . I 6 HOH 17 325 17 HOH HOH A . I 6 HOH 18 326 18 HOH HOH A . I 6 HOH 19 327 19 HOH HOH A . I 6 HOH 20 328 20 HOH HOH A . I 6 HOH 21 329 22 HOH HOH A . I 6 HOH 22 330 23 HOH HOH A . I 6 HOH 23 331 24 HOH HOH A . I 6 HOH 24 332 25 HOH HOH A . J 6 HOH 1 23 21 HOH HOH L . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id ASN _pdbx_struct_mod_residue.label_seq_id 169 _pdbx_struct_mod_residue.auth_asym_id A _pdbx_struct_mod_residue.auth_comp_id ASN _pdbx_struct_mod_residue.auth_seq_id 169 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id ASN _pdbx_struct_mod_residue.details 'GLYCOSYLATION SITE' # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA dimeric 2 2 software_defined_assembly PISA tetrameric 4 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,D,E,F,G,H,I,J 2 1,2 A,B,C,D,E,F,G,H,I,J # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3110 ? 1 MORE -48 ? 1 'SSA (A^2)' 13980 ? 2 'ABSA (A^2)' 7290 ? 2 MORE -113 ? 2 'SSA (A^2)' 26890 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 24_656 -z+5/4,-y+1/4,-x+5/4 0.0000000000 0.0000000000 -1.0000000000 163.3000000000 0.0000000000 -1.0000000000 0.0000000000 32.6600000000 -1.0000000000 0.0000000000 0.0000000000 163.3000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2000-11-08 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2018-01-31 5 'Structure model' 2 0 2020-07-29 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 5 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' Advisory 4 4 'Structure model' 'Experimental preparation' 5 5 'Structure model' Advisory 6 5 'Structure model' 'Atomic model' 7 5 'Structure model' 'Data collection' 8 5 'Structure model' 'Derived calculations' 9 5 'Structure model' 'Non-polymer description' 10 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' exptl_crystal_grow 2 4 'Structure model' pdbx_unobs_or_zero_occ_atoms 3 4 'Structure model' pdbx_validate_close_contact 4 5 'Structure model' atom_site 5 5 'Structure model' chem_comp 6 5 'Structure model' database_PDB_caveat 7 5 'Structure model' entity 8 5 'Structure model' pdbx_branch_scheme 9 5 'Structure model' pdbx_chem_comp_identifier 10 5 'Structure model' pdbx_entity_branch 11 5 'Structure model' pdbx_entity_branch_descriptor 12 5 'Structure model' pdbx_entity_branch_link 13 5 'Structure model' pdbx_entity_branch_list 14 5 'Structure model' pdbx_entity_nonpoly 15 5 'Structure model' pdbx_nonpoly_scheme 16 5 'Structure model' pdbx_struct_assembly_gen 17 5 'Structure model' pdbx_validate_chiral 18 5 'Structure model' pdbx_validate_close_contact 19 5 'Structure model' struct_asym 20 5 'Structure model' struct_conn 21 5 'Structure model' struct_site 22 5 'Structure model' struct_site_gen # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_exptl_crystal_grow.pdbx_details' 2 4 'Structure model' '_exptl_crystal_grow.temp' 3 4 'Structure model' '_pdbx_validate_close_contact.auth_atom_id_1' 4 4 'Structure model' '_pdbx_validate_close_contact.auth_atom_id_2' 5 4 'Structure model' '_pdbx_validate_close_contact.auth_comp_id_1' 6 4 'Structure model' '_pdbx_validate_close_contact.auth_comp_id_2' 7 4 'Structure model' '_pdbx_validate_close_contact.auth_seq_id_1' 8 4 'Structure model' '_pdbx_validate_close_contact.auth_seq_id_2' 9 5 'Structure model' '_atom_site.B_iso_or_equiv' 10 5 'Structure model' '_atom_site.Cartn_x' 11 5 'Structure model' '_atom_site.Cartn_y' 12 5 'Structure model' '_atom_site.Cartn_z' 13 5 'Structure model' '_atom_site.auth_asym_id' 14 5 'Structure model' '_atom_site.auth_atom_id' 15 5 'Structure model' '_atom_site.auth_comp_id' 16 5 'Structure model' '_atom_site.auth_seq_id' 17 5 'Structure model' '_atom_site.label_asym_id' 18 5 'Structure model' '_atom_site.label_atom_id' 19 5 'Structure model' '_atom_site.label_comp_id' 20 5 'Structure model' '_atom_site.label_entity_id' 21 5 'Structure model' '_atom_site.type_symbol' 22 5 'Structure model' '_chem_comp.formula' 23 5 'Structure model' '_chem_comp.formula_weight' 24 5 'Structure model' '_chem_comp.id' 25 5 'Structure model' '_chem_comp.mon_nstd_flag' 26 5 'Structure model' '_chem_comp.name' 27 5 'Structure model' '_chem_comp.type' 28 5 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DENZO 'data reduction' . ? 1 SCALEPACK 'data scaling' . ? 2 AMoRE phasing . ? 3 REFMAC refinement . ? 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O4 B NDG 2 ? ? O2 B BMA 3 ? ? 1.99 2 1 O4 B NDG 2 ? ? C2 B BMA 3 ? ? 2.05 3 1 C6 B NAG 1 ? ? C1 B FUL 4 ? ? 2.19 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CA A ILE 90 ? ? CB A ILE 90 ? ? 1.394 1.544 -0.150 0.023 N 2 1 CB A VAL 181 ? ? CG1 A VAL 181 ? ? 1.379 1.524 -0.145 0.021 N 3 1 C A VAL 217 ? ? N A GLY 219 ? ? 1.184 1.336 -0.152 0.023 Y 4 1 CA L GLN 15 ? ? CB L GLN 15 ? ? 1.389 1.535 -0.146 0.022 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CA A GLN 34 ? ? C A GLN 34 ? ? N A ILE 37 ? ? 102.55 117.20 -14.65 2.20 Y 2 1 O A GLN 34 ? ? C A GLN 34 ? ? N A ILE 37 ? ? 136.25 122.70 13.55 1.60 Y 3 1 CA A ARG 130 ? ? C A ARG 130 ? ? N A ALA 132 ? ? 130.76 117.20 13.56 2.20 Y 4 1 O A ARG 130 ? ? C A ARG 130 ? ? N A ALA 132 ? ? 104.47 122.70 -18.23 1.60 Y 5 1 N A PRO 133 ? ? CD A PRO 133 ? ? CG A PRO 133 ? ? 94.64 103.80 -9.16 1.20 N 6 1 CB A ASP 201 B ? CG A ASP 201 B ? OD2 A ASP 201 B ? 124.25 118.30 5.95 0.90 N 7 1 NE A ARG 224 ? ? CZ A ARG 224 ? ? NH2 A ARG 224 ? ? 117.15 120.30 -3.15 0.50 N 8 1 N A ASN 236 ? ? CA A ASN 236 ? ? CB A ASN 236 ? ? 98.42 110.60 -12.18 1.80 N 9 1 NE L ARG 12 ? ? CZ L ARG 12 ? ? NH2 L ARG 12 ? ? 116.99 120.30 -3.31 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 24 ? ? -39.25 129.09 2 1 HIS A 37 D ? -77.71 26.82 3 1 ASN A 37 E ? 168.39 10.75 4 1 ASN A 37 F ? 48.69 19.60 5 1 PHE A 59 ? ? -77.25 25.60 6 1 ASN A 61 ? ? 50.74 16.56 7 1 VAL A 61 D ? -40.01 -16.96 8 1 ASN A 71 ? ? -131.14 -30.08 9 1 TRP A 75 ? ? -57.39 176.52 10 1 PRO A 78 ? ? -45.59 155.30 11 1 LYS A 147 ? ? 65.26 -145.06 12 1 TRP A 171 ? ? -112.24 -93.64 13 1 LYS A 188 ? ? 73.44 -30.16 14 1 ARG A 201 A ? 175.99 174.65 15 1 TRP A 215 ? ? -157.84 -156.26 16 1 LYS A 223 ? ? 52.42 17.08 17 1 ASN A 236 ? ? -20.69 -76.43 18 1 THR A 254 ? ? -112.34 72.61 19 1 ASP L 6 ? ? -89.48 -154.14 20 1 PHE L 13 ? ? 37.31 58.39 # _pdbx_validate_main_chain_plane.id 1 _pdbx_validate_main_chain_plane.PDB_model_num 1 _pdbx_validate_main_chain_plane.auth_comp_id ARG _pdbx_validate_main_chain_plane.auth_asym_id A _pdbx_validate_main_chain_plane.auth_seq_id 130 _pdbx_validate_main_chain_plane.PDB_ins_code ? _pdbx_validate_main_chain_plane.label_alt_id ? _pdbx_validate_main_chain_plane.improper_torsion_angle 11.02 # _pdbx_validate_chiral.id 1 _pdbx_validate_chiral.PDB_model_num 1 _pdbx_validate_chiral.auth_atom_id C1 _pdbx_validate_chiral.label_alt_id ? _pdbx_validate_chiral.auth_asym_id B _pdbx_validate_chiral.auth_comp_id NAG _pdbx_validate_chiral.auth_seq_id 1 _pdbx_validate_chiral.PDB_ins_code ? _pdbx_validate_chiral.details 'WRONG HAND' _pdbx_validate_chiral.omega . # _pdbx_validate_polymer_linkage.id 1 _pdbx_validate_polymer_linkage.PDB_model_num 1 _pdbx_validate_polymer_linkage.auth_atom_id_1 C _pdbx_validate_polymer_linkage.auth_asym_id_1 A _pdbx_validate_polymer_linkage.auth_comp_id_1 VAL _pdbx_validate_polymer_linkage.auth_seq_id_1 217 _pdbx_validate_polymer_linkage.PDB_ins_code_1 ? _pdbx_validate_polymer_linkage.label_alt_id_1 ? _pdbx_validate_polymer_linkage.auth_atom_id_2 N _pdbx_validate_polymer_linkage.auth_asym_id_2 A _pdbx_validate_polymer_linkage.auth_comp_id_2 GLY _pdbx_validate_polymer_linkage.auth_seq_id_2 219 _pdbx_validate_polymer_linkage.PDB_ins_code_2 ? _pdbx_validate_polymer_linkage.label_alt_id_2 ? _pdbx_validate_polymer_linkage.dist 1.18 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 L ARG 0 ? B ARG 1 2 1 Y 1 L ASP 1 ? B ASP 2 3 1 Y 1 L ASN 2 ? B ASN 3 4 1 Y 1 L LYS 16 ? B LYS 17 5 1 Y 1 L LEU 17 ? B LEU 18 6 1 Y 1 L GLU 18 ? B GLU 19 7 1 Y 1 L SER 19 ? B SER 20 8 1 Y 1 L GLY 20 ? B GLY 21 9 1 Y 1 L MET 21 ? B MET 22 10 1 Y 1 L ARG 22 ? B ARG 23 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero C 3 NAG 1 B NAG 1 S NAG 301 n C 3 NDG 2 B NDG 2 S NAG 302 n C 3 BMA 3 B BMA 3 S MAN 303 n C 3 FUL 4 B FUL 4 S FUC 300 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier BMA 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpb BMA 'COMMON NAME' GMML 1.0 b-D-mannopyranose BMA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Manp BMA 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man FUL 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 LFucpb FUL 'COMMON NAME' GMML 1.0 b-L-fucopyranose FUL 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-L-Fucp FUL 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Fuc NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc NDG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAca NDG 'COMMON NAME' GMML 1.0 N-acetyl-a-D-glucopyranosamine NDG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-GlcpNAc NDG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # _pdbx_entity_branch.entity_id 3 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 3 'DManpb1-4DGlcpNAca1-4[LFucpb1-6]DGlcpNAcb1-' 'Glycam Condensed Sequence' GMML 1.0 2 3 'WURCS=2.0/4,4,3/[a2122h-1b_1-5_2*NCC/3=O][a2122h-1a_1-5_2*NCC/3=O][a1122h-1b_1-5][a1221m-1b_1-5]/1-2-3-4/a4-b1_a6-d1_b4-c1' WURCS PDB2Glycan 1.1.0 3 3 '[]{[(4+1)][a-D-GlcpNAc]{[(4+1)][a-D-GlcpNAc]{[(4+1)][b-D-Manp]{}}[(6+1)][b-L-Fucp]{}}}' LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 3 2 NDG C1 O1 1 NAG O4 HO4 sing ? 2 3 3 BMA C1 O1 2 NDG O4 HO4 sing ? 3 3 4 FUL C1 O1 1 NAG O6 HO6 sing ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 3 NAG 1 n 3 NDG 2 n 3 BMA 3 n 3 FUL 4 n # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'SULFATE ION' SO4 5 'P-AMINO BENZAMIDINE' PBZ 6 water HOH #